Diff of the two buildlogs: -- --- b1/build.log 2024-11-26 01:13:18.558798906 +0000 +++ b2/build.log 2024-11-26 01:18:25.196967621 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Nov 25 13:03:46 -12 2024 -I: pbuilder-time-stamp: 1732583026 +I: Current time: Mon Dec 29 21:36:21 +14 2025 +I: pbuilder-time-stamp: 1766993781 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz] I: copying local configuration @@ -31,52 +31,84 @@ dpkg-source: info: applying 0004-Upgrade-to-SeqAn-2.5.0.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3939877/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 29 07:36 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='experimental' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=experimental + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='0b72ee5592354fc6a1433f12bfbc70e7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3939877' - PS1='# ' - PS2='> ' + INVOCATION_ID=d14bee28ed784e52a5b22fd98aee0589 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=955308 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jxcWDsv4/pbuilderrc_pfkP --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jxcWDsv4/b1 --logfile b1/build.log unicycler_0.5.1+dfsg-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jxcWDsv4/pbuilderrc_f0yf --distribution experimental --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jxcWDsv4/b2 --logfile b2/build.log unicycler_0.5.1+dfsg-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3939877/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -424,7 +456,7 @@ Get: 267 http://deb.debian.org/debian unstable/main amd64 samtools amd64 1.20-3 [653 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 spades amd64 3.15.5+dfsg-7 [9020 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] -Fetched 299 MB in 22s (13.4 MB/s) +Fetched 299 MB in 8s (36.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) @@ -1324,8 +1356,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Nov 26 01:06:11 UTC 2024. -Universal Time is now: Tue Nov 26 01:06:11 UTC 2024. +Local time is now: Mon Dec 29 07:37:14 UTC 2025. +Universal Time is now: Mon Dec 29 07:37:14 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... @@ -1739,7 +1771,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/unicycler-0.5.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../unicycler_0.5.1+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for experimental +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/unicycler-0.5.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../unicycler_0.5.1+dfsg-2_source.changes dpkg-buildpackage: info: source package unicycler dpkg-buildpackage: info: source version 0.5.1+dfsg-2 dpkg-buildpackage: info: source distribution experimental @@ -1755,7 +1791,7 @@ make[2]: Entering directory '/build/reproducible-path/unicycler-0.5.1+dfsg' Platform: Linux Compiler: g++ 14.2.0 -rm -f unicycler/src/miniasm_assembly.o unicycler/src/minimap/sdust.o unicycler/src/minimap/sketch.o unicycler/src/minimap/map.o unicycler/src/minimap/bseq.o unicycler/src/minimap/index.o unicycler/src/minimap/misc.o unicycler/src/minimap/kthread.o unicycler/src/global_align.o unicycler/src/miniasm/asm.o unicycler/src/miniasm/sys.o unicycler/src/miniasm/hit.o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/asg.o unicycler/src/miniasm/paf.o unicycler/src/miniasm/dotter.o unicycler/src/semi_global_align_exhaustive.o unicycler/src/scoredalignment.o unicycler/src/random_alignments.o unicycler/src/minimap_align.o unicycler/src/ref_seqs.o unicycler/src/kmers.o unicycler/src/start_end_align.o unicycler/src/path_align.o unicycler/src/string_functions.o unicycler/src/semi_global_align.o unicycler/src/overlap_align.o unicycler/src/consensus_align.o +rm -f unicycler/src/consensus_align.o unicycler/src/overlap_align.o unicycler/src/global_align.o unicycler/src/kmers.o unicycler/src/miniasm_assembly.o unicycler/src/string_functions.o unicycler/src/random_alignments.o unicycler/src/semi_global_align_exhaustive.o unicycler/src/path_align.o unicycler/src/ref_seqs.o unicycler/src/scoredalignment.o unicycler/src/minimap/index.o unicycler/src/minimap/sketch.o unicycler/src/minimap/sdust.o unicycler/src/minimap/bseq.o unicycler/src/minimap/kthread.o unicycler/src/minimap/map.o unicycler/src/minimap/misc.o unicycler/src/semi_global_align.o unicycler/src/miniasm/dotter.o unicycler/src/miniasm/sys.o unicycler/src/miniasm/asg.o unicycler/src/miniasm/asm.o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/paf.o unicycler/src/miniasm/hit.o unicycler/src/minimap_align.o unicycler/src/start_end_align.o rm -f unicycler/cpp_functions.so make[2]: Leaving directory '/build/reproducible-path/unicycler-0.5.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/unicycler-0.5.1+dfsg' @@ -1780,9 +1816,22 @@ make[2]: Entering directory '/build/reproducible-path/unicycler-0.5.1+dfsg' Platform: Linux Compiler: g++ 14.2.0 +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/consensus_align.o unicycler/src/consensus_align.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/overlap_align.o unicycler/src/overlap_align.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/global_align.o unicycler/src/global_align.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/kmers.o unicycler/src/kmers.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm_assembly.o unicycler/src/miniasm_assembly.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/sdust.o unicycler/src/minimap/sdust.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/string_functions.o unicycler/src/string_functions.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/random_alignments.o unicycler/src/random_alignments.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/semi_global_align_exhaustive.o unicycler/src/semi_global_align_exhaustive.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/path_align.o unicycler/src/path_align.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/ref_seqs.o unicycler/src/ref_seqs.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/scoredalignment.o unicycler/src/scoredalignment.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/index.o unicycler/src/minimap/index.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/sketch.o unicycler/src/minimap/sketch.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/sdust.o unicycler/src/minimap/sdust.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/bseq.o unicycler/src/minimap/bseq.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/kthread.o unicycler/src/minimap/kthread.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/map.o unicycler/src/minimap/map.cpp In file included from unicycler/src/minimap/map.cpp:65: unicycler/src/minimap/map.cpp: In function 'uint64_t ks_ksmall_low32lt(size_t, uint64_t*, size_t)': @@ -1913,8 +1962,6 @@ unicycler/src/minimap/map.cpp:71:1: note: in expansion of macro 'KSORT_INIT' 71 | KSORT_INIT(low32gt, uint64_t, gt_low32) | ^~~~~~~~~~ -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/bseq.o unicycler/src/minimap/bseq.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/index.o unicycler/src/minimap/index.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/misc.o unicycler/src/minimap/misc.cpp In file included from unicycler/src/minimap/misc.cpp:28: unicycler/src/minimap/misc.cpp: In function 'uint32_t ks_ksmall_uint32_t(size_t, uint32_t*, size_t)': @@ -2002,88 +2049,77 @@ unicycler/src/minimap/misc.cpp:31:1: note: in expansion of macro 'KSORT_INIT_GENERIC' 31 | KSORT_INIT_GENERIC(uint32_t) | ^~~~~~~~~~~~~~~~~~ -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap/kthread.o unicycler/src/minimap/kthread.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/global_align.o unicycler/src/global_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/asm.o unicycler/src/miniasm/asm.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/semi_global_align.o unicycler/src/semi_global_align.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/dotter.o unicycler/src/miniasm/dotter.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/sys.o unicycler/src/miniasm/sys.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/hit.o unicycler/src/miniasm/hit.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/sdict.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/asg.o unicycler/src/miniasm/asg.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/asm.o unicycler/src/miniasm/asm.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/sdict.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/paf.o unicycler/src/miniasm/paf.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/dotter.o unicycler/src/miniasm/dotter.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/semi_global_align_exhaustive.o unicycler/src/semi_global_align_exhaustive.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/scoredalignment.o unicycler/src/scoredalignment.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/random_alignments.o unicycler/src/random_alignments.cpp +g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/miniasm/hit.o unicycler/src/miniasm/hit.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/minimap_align.o unicycler/src/minimap_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/ref_seqs.o unicycler/src/ref_seqs.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/kmers.o unicycler/src/kmers.cpp g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/start_end_align.o unicycler/src/start_end_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/path_align.o unicycler/src/path_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/string_functions.o unicycler/src/string_functions.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/semi_global_align.o unicycler/src/semi_global_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/overlap_align.o unicycler/src/overlap_align.cpp -g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o unicycler/src/consensus_align.o unicycler/src/consensus_align.cpp -g++ -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-soname,unicycler/cpp_functions.so -o unicycler/cpp_functions.so unicycler/src/miniasm_assembly.o unicycler/src/minimap/sdust.o unicycler/src/minimap/sketch.o unicycler/src/minimap/map.o unicycler/src/minimap/bseq.o unicycler/src/minimap/index.o unicycler/src/minimap/misc.o unicycler/src/minimap/kthread.o unicycler/src/global_align.o unicycler/src/miniasm/asm.o unicycler/src/miniasm/sys.o unicycler/src/miniasm/hit.o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/asg.o unicycler/src/miniasm/paf.o unicycler/src/miniasm/dotter.o unicycler/src/semi_global_align_exhaustive.o unicycler/src/scoredalignment.o unicycler/src/random_alignments.o unicycler/src/minimap_align.o unicycler/src/ref_seqs.o unicycler/src/kmers.o unicycler/src/start_end_align.o unicycler/src/path_align.o unicycler/src/string_functions.o unicycler/src/semi_global_align.o unicycler/src/overlap_align.o unicycler/src/consensus_align.o -Wl,-z,relro -Wl,-z,now -shared -lz +g++ -std=c++17 -Iunicycler/include -fPIC -lrt -lpthread -O3 -DNDEBUG -g -O2 -ffile-prefix-map=/build/reproducible-path/unicycler-0.5.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-soname,unicycler/cpp_functions.so -o unicycler/cpp_functions.so unicycler/src/consensus_align.o unicycler/src/overlap_align.o unicycler/src/global_align.o unicycler/src/kmers.o unicycler/src/miniasm_assembly.o unicycler/src/string_functions.o unicycler/src/random_alignments.o unicycler/src/semi_global_align_exhaustive.o unicycler/src/path_align.o unicycler/src/ref_seqs.o unicycler/src/scoredalignment.o unicycler/src/minimap/index.o unicycler/src/minimap/sketch.o unicycler/src/minimap/sdust.o unicycler/src/minimap/bseq.o unicycler/src/minimap/kthread.o unicycler/src/minimap/map.o unicycler/src/minimap/misc.o unicycler/src/semi_global_align.o unicycler/src/miniasm/dotter.o unicycler/src/miniasm/sys.o unicycler/src/miniasm/asg.o unicycler/src/miniasm/asm.o unicycler/src/miniasm/sdict.o unicycler/src/miniasm/paf.o unicycler/src/miniasm/hit.o unicycler/src/minimap_align.o unicycler/src/start_end_align.o -Wl,-z,relro -Wl,-z,now -shared -lz make[2]: Leaving directory '/build/reproducible-path/unicycler-0.5.1+dfsg' dh_auto_build I: pybuild base:311: /usr/bin/python3.13 setup.py build running build running build_py creating /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/bridge_loop_unroll.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/blast_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/assembly_graph_segment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/string_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/assembly_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/bridge_long_read_simple.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler -copying unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler copying unicycler/bridge_miniasm.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler +copying unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/bridge_loop_unroll.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/blast_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/assembly_graph_segment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/string_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/assembly_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/bridge_long_read_simple.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler -copying unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler copying unicycler/bridge_miniasm.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler +copying unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler make[1]: Leaving directory '/build/reproducible-path/unicycler-0.5.1+dfsg' dh_auto_test -O--buildsystem=pybuild I: pybuild pybuild:308: cp -a unicycler-runner.py /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build; cp -a unicycler/cpp_functions.so /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler; cp -a sample_data /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build @@ -2371,7 +2407,7 @@ test_get_read_lengths_2 (test.test_spades_func.TestSPAdesFunc.test_get_read_lengths_2) ... ok ---------------------------------------------------------------------- -Ran 229 tests in 43.735s +Ran 229 tests in 35.329s OK I: pybuild pybuild:334: rm /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler-runner.py; rm -r /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/sample_data; rm -r /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/__pycache__ @@ -2660,7 +2696,7 @@ test_get_read_lengths_2 (test.test_spades_func.TestSPAdesFunc.test_get_read_lengths_2) ... ok ---------------------------------------------------------------------- -Ran 229 tests in 44.575s +Ran 229 tests in 34.903s OK I: pybuild pybuild:334: rm /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler-runner.py; rm -r /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/sample_data; rm -r /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/__pycache__ @@ -2690,60 +2726,60 @@ running install_lib creating /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages creating /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_loop_unroll.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/cpp_functions.so -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/blast_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/assembly_graph_segment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/string_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/assembly_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_long_read_simple.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/bridge_miniasm.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_loop_unroll.py to bridge_loop_unroll.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/minimap_alignment.py to minimap_alignment.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/blast_func.py to blast_func.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/read_ref.py to read_ref.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph_segment.py to assembly_graph_segment.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/cpp_wrappers.py to cpp_wrappers.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/unicycler.py to unicycler.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph_copy_depth.py to assembly_graph_copy_depth.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/spades_func.py to spades_func.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/string_graph.py to string_graph.cpython-313.pyc +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.13_unicycler/build/unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/path_finding.py to path_finding.cpython-313.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_long_read.py to bridge_long_read.cpython-313.pyc /usr/lib/python3.13/dist-packages/unicycler/bridge_long_read.py:619: SyntaxWarning: invalid escape sequence '\c' -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph.py to assembly_graph.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/unicycler.py to unicycler.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_loop_unroll.py to bridge_loop_unroll.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_spades_contig.py to bridge_spades_contig.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph_copy_depth.py to assembly_graph_copy_depth.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/blast_func.py to blast_func.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/log.py to log.cpython-313.pyc +/usr/lib/python3.13/dist-packages/unicycler/log.py:194: SyntaxWarning: invalid escape sequence '\[' byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_common.py to bridge_common.cpython-313.pyc /usr/lib/python3.13/dist-packages/unicycler/bridge_common.py:43: SyntaxWarning: invalid escape sequence '\l' byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/version.py to version.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_spades_contig.py to bridge_spades_contig.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/unicycler_align.py to unicycler_align.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/misc.py to misc.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/settings.py to settings.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/path_finding.py to path_finding.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_long_read_simple.py to bridge_long_read_simple.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph_segment.py to assembly_graph_segment.cpython-313.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/miniasm_assembly.py to miniasm_assembly.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/string_graph.py to string_graph.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/assembly_graph.py to assembly_graph.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_long_read_simple.py to bridge_long_read_simple.cpython-313.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/alignment.py to alignment.cpython-313.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/log.py to log.cpython-313.pyc -/usr/lib/python3.13/dist-packages/unicycler/log.py:194: SyntaxWarning: invalid escape sequence '\[' +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/read_ref.py to read_ref.cpython-313.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/bridge_miniasm.py to bridge_miniasm.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/cpp_wrappers.py to cpp_wrappers.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/spades_func.py to spades_func.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/misc.py to misc.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/settings.py to settings.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/unicycler_align.py to unicycler_align.cpython-313.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.13/dist-packages/unicycler/minimap_alignment.py to minimap_alignment.cpython-313.pyc running install_egg_info running egg_info creating unicycler.egg-info @@ -2801,60 +2837,60 @@ running install_lib creating /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages creating /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_loop_unroll.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/cpp_functions.so -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/blast_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/assembly_graph_segment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/unicycler.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/assembly_graph_copy_depth.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/__init__.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/string_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_long_read.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/assembly_graph.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_common.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/version.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_spades_contig.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/path_finding.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_long_read_simple.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/miniasm_assembly.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/log.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/read_ref.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/bridge_miniasm.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_loop_unroll.py to bridge_loop_unroll.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/__init__.py to __init__.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/minimap_alignment.py to minimap_alignment.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/blast_func.py to blast_func.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/read_ref.py to read_ref.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph_segment.py to assembly_graph_segment.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/cpp_wrappers.py to cpp_wrappers.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/unicycler.py to unicycler.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph_copy_depth.py to assembly_graph_copy_depth.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/spades_func.py to spades_func.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/string_graph.py to string_graph.cpython-312.pyc +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/cpp_wrappers.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/spades_func.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/misc.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/settings.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/unicycler_align.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +copying /build/reproducible-path/unicycler-0.5.1+dfsg/.pybuild/cpython3_3.12_unicycler/build/unicycler/minimap_alignment.py -> /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/path_finding.py to path_finding.cpython-312.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_long_read.py to bridge_long_read.cpython-312.pyc /usr/lib/python3.12/dist-packages/unicycler/bridge_long_read.py:619: SyntaxWarning: invalid escape sequence '\c' -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph.py to assembly_graph.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/unicycler.py to unicycler.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_loop_unroll.py to bridge_loop_unroll.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_spades_contig.py to bridge_spades_contig.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph_copy_depth.py to assembly_graph_copy_depth.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/blast_func.py to blast_func.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/log.py to log.cpython-312.pyc +/usr/lib/python3.12/dist-packages/unicycler/log.py:194: SyntaxWarning: invalid escape sequence '\[' byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_common.py to bridge_common.cpython-312.pyc /usr/lib/python3.12/dist-packages/unicycler/bridge_common.py:43: SyntaxWarning: invalid escape sequence '\l' byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/version.py to version.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_spades_contig.py to bridge_spades_contig.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/unicycler_align.py to unicycler_align.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/misc.py to misc.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/settings.py to settings.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/path_finding.py to path_finding.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_long_read_simple.py to bridge_long_read_simple.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph_segment.py to assembly_graph_segment.cpython-312.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/miniasm_assembly.py to miniasm_assembly.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/string_graph.py to string_graph.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/assembly_graph.py to assembly_graph.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_long_read_simple.py to bridge_long_read_simple.cpython-312.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/alignment.py to alignment.cpython-312.pyc -byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/log.py to log.cpython-312.pyc -/usr/lib/python3.12/dist-packages/unicycler/log.py:194: SyntaxWarning: invalid escape sequence '\[' +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/read_ref.py to read_ref.cpython-312.pyc byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/bridge_miniasm.py to bridge_miniasm.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/cpp_wrappers.py to cpp_wrappers.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/spades_func.py to spades_func.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/misc.py to misc.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/settings.py to settings.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/unicycler_align.py to unicycler_align.cpython-312.pyc +byte-compiling /build/reproducible-path/unicycler-0.5.1+dfsg/debian/unicycler/usr/lib/python3.12/dist-packages/unicycler/minimap_alignment.py to minimap_alignment.cpython-312.pyc running install_egg_info running egg_info writing unicycler.egg-info/PKG-INFO @@ -2914,9 +2950,9 @@ dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'unicycler-dbgsym' in '../unicycler-dbgsym_0.5.1+dfsg-2_amd64.deb'. dpkg-deb: building package 'unicycler' in '../unicycler_0.5.1+dfsg-2_amd64.deb'. dpkg-deb: building package 'unicycler-data' in '../unicycler-data_0.5.1+dfsg-2_all.deb'. +dpkg-deb: building package 'unicycler-dbgsym' in '../unicycler-dbgsym_0.5.1+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../unicycler_0.5.1+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../unicycler_0.5.1+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -2924,12 +2960,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/955308/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3939877 and its subdirectories -I: Current time: Mon Nov 25 13:13:17 -12 2024 -I: pbuilder-time-stamp: 1732583597 +I: removing directory /srv/workspace/pbuilder/955308 and its subdirectories +I: Current time: Mon Dec 29 21:41:24 +14 2025 +I: pbuilder-time-stamp: 1766994084