Diff of the two buildlogs: -- --- b1/build.log 2025-07-23 15:42:43.817013835 +0000 +++ b2/build.log 2025-07-23 15:48:37.525415910 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Aug 25 09:59:54 -12 2026 -I: pbuilder-time-stamp: 1787695194 +I: Current time: Thu Jul 24 05:42:48 +14 2025 +I: pbuilder-time-stamp: 1753285368 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: applying use-system-packages.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4020880/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 23 15:43 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='experimental' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=experimental + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='a3570f7b09fe4d88b3ed03752b3001eb' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4020880' - PS1='# ' - PS2='> ' + INVOCATION_ID=f985fd25292f4c9a9ec6b1fc85f0b943 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1736773 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G1wArrk3/pbuilderrc_K98W --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G1wArrk3/b1 --logfile b1/build.log voronota_1.29.4370+ds-1~exp1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G1wArrk3/pbuilderrc_6SQs --distribution experimental --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G1wArrk3/b2 --logfile b2/build.log voronota_1.29.4370+ds-1~exp1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/4020880/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -170,7 +202,7 @@ Get: 59 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 help2man arm64 1.49.3+b1 [198 kB] -Fetched 29.0 MB in 0s (130 MB/s) +Fetched 29.0 MB in 0s (196 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19963 files and directories currently installed.) @@ -429,7 +461,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/voronota-1.29.4370+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../voronota_1.29.4370+ds-1~exp1_source.changes +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for experimental +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/voronota-1.29.4370+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../voronota_1.29.4370+ds-1~exp1_source.changes dpkg-buildpackage: info: source package voronota dpkg-buildpackage: info: source version 1.29.4370+ds-1~exp1 dpkg-buildpackage: info: source distribution experimental @@ -480,7 +516,7 @@ -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") --- Configuring done (2.7s) +-- Configuring done (1.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -510,34 +546,34 @@ make[3]: Entering directory '/build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/voronota-1.29.4370+ds /build/reproducible-path/voronota-1.29.4370+ds/expansion_lt /build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu /build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu/expansion_lt /build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu/expansion_lt/CMakeFiles/voronota-lt.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu' -make -f CMakeFiles/voronota.dir/build.make CMakeFiles/voronota.dir/build +make -f expansion_lt/CMakeFiles/voronota-lt.dir/build.make expansion_lt/CMakeFiles/voronota-lt.dir/build make[3]: Leaving directory '/build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu' -make -f expansion_lt/CMakeFiles/voronota-lt.dir/build.make expansion_lt/CMakeFiles/voronota-lt.dir/build +make -f CMakeFiles/voronota.dir/build.make CMakeFiles/voronota.dir/build make[3]: Entering directory '/build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu' -[ 2%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o -[ 4%] Building CXX object expansion_lt/CMakeFiles/voronota-lt.dir/src/voronota_lt.cpp.o -[ 6%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_mock_solvent.cpp.o +[ 2%] Building CXX object expansion_lt/CMakeFiles/voronota-lt.dir/src/voronota_lt.cpp.o cd /build/reproducible-path/voronota-1.29.4370+ds/obj-aarch64-linux-gnu/expansion_lt && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -fopenmp -MD -MT expansion_lt/CMakeFiles/voronota-lt.dir/src/voronota_lt.cpp.o -MF CMakeFiles/voronota-lt.dir/src/voronota_lt.cpp.o.d -o CMakeFiles/voronota-lt.dir/src/voronota_lt.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/expansion_lt/src/voronota_lt.cpp -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_contacts.cpp -[ 8%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_path_centralities.cpp.o +[ 4%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_path_centralities.cpp.o +[ 6%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_mock_solvent.cpp.o +[ 8%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_mock_solvent.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_mock_solvent.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_mock_solvent.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_mock_solvent.cpp -[ 10%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_contacts.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_path_centralities.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_path_centralities.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_path_centralities.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_path_centralities.cpp +[ 10%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_vertices.cpp [ 12%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices_in_parallel.cpp.o -[ 14%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_compare_contacts.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices_in_parallel.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices_in_parallel.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_calculate_vertices_in_parallel.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_vertices_in_parallel.cpp +[ 14%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_compare_contacts.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_compare_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_compare_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_compare_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_compare_contacts.cpp [ 16%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_compare_files_as_sets.cpp.o -[ 18%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_blank.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_compare_files_as_sets.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_compare_files_as_sets.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_compare_files_as_sets.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_compare_files_as_sets.cpp +[ 18%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_blank.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_demo_blank.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_demo_blank.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_demo_blank.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_blank.cpp -[ 20%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_polygon_triangulation.cpp.o +[ 20%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_hypercut.cpp +[ 22%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_polygon_triangulation.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_demo_polygon_triangulation.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_demo_polygon_triangulation.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_demo_polygon_triangulation.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_polygon_triangulation.cpp -[ 22%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o [ 25%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_demo_ses.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_demo_hypercut.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_hypercut.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_demo_ses.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_demo_ses.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_demo_ses.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_ses.cpp [ 27%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_draw_balls.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_draw_balls.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_draw_balls.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_draw_balls.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_draw_balls.cpp @@ -553,6 +589,8 @@ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_place_membrane.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_place_membrane.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_place_membrane.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_place_membrane.cpp [ 39%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_plot_contacts.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_plot_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_plot_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_plot_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_plot_contacts.cpp +[ 41%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls.cpp In file included from /usr/include/c++/14/string:51, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, @@ -627,8 +665,6 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -[ 41%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls.cpp In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -685,13 +721,10 @@ | ^ [ 43%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls_clashes.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls_clashes.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls_clashes.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls_clashes.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls_clashes.cpp -In file included from /usr/include/c++/14/string:51, - from /usr/include/c++/14/bits/locale_classes.h:40, - from /usr/include/c++/14/bits/ios_base.h:41, - from /usr/include/c++/14/ios:44, - from /usr/include/c++/14/ostream:40, - from /usr/include/c++/14/iostream:41, - from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_mock_solvent.cpp:1: +In file included from /usr/include/c++/14/bits/stl_tree.h:63, + from /usr/include/c++/14/set:62, + from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/../apollota/search_for_spherical_collisions.h:4, + from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_draw_balls.cpp:1: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -709,9 +742,9 @@ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/aarch64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, - from /usr/include/c++/14/string:43: + from /usr/include/c++/14/bits/stl_tree.h:64: In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long unsigned int]', - inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, + inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:398:44, inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:334:26, @@ -738,7 +771,7 @@ 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long unsigned int]', - inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, + inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:398:44, inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:334:26, @@ -749,10 +782,9 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -In file included from /usr/include/c++/14/bits/stl_tree.h:63, - from /usr/include/c++/14/set:62, - from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/../apollota/search_for_spherical_collisions.h:4, - from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_draw_balls.cpp:1: +In file included from /usr/include/c++/14/vector:62, + from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/../apollota/spheres_boundary_construction.h:4, + from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_ses.cpp:1: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -770,7 +802,7 @@ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/aarch64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, - from /usr/include/c++/14/bits/stl_tree.h:64: + from /usr/include/c++/14/vector:63: In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long unsigned int]', inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, @@ -783,8 +815,6 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -[ 45%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls_distances.cpp In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -812,11 +842,13 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -[ 47%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls_sequences_pairings_stats.cpp -In file included from /usr/include/c++/14/vector:62, - from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/../apollota/spheres_boundary_construction.h:4, - from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_demo_ses.cpp:1: +In file included from /usr/include/c++/14/string:51, + from /usr/include/c++/14/bits/locale_classes.h:40, + from /usr/include/c++/14/bits/ios_base.h:41, + from /usr/include/c++/14/ios:44, + from /usr/include/c++/14/ostream:40, + from /usr/include/c++/14/iostream:41, + from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_calculate_mock_solvent.cpp:1: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -834,9 +866,9 @@ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/aarch64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, - from /usr/include/c++/14/vector:63: + from /usr/include/c++/14/string:43: In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long unsigned int]', - inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, + inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:398:44, inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:334:26, @@ -847,8 +879,8 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -[ 50%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts.cpp +[ 45%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls_distances.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls_distances.cpp In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -865,7 +897,7 @@ 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long unsigned int]', - inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, + inlined from 'static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long unsigned int]' at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:380:33, inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:398:44, inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = long unsigned int; _Alloc = std::allocator]' at /usr/include/c++/14/bits/stl_vector.h:334:26, @@ -876,8 +908,16 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ +[ 47%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_balls_sequences_pairings_stats.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_balls_sequences_pairings_stats.cpp +[ 50%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts.cpp [ 52%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts_depth_values.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts_depth_values.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts_depth_values.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts_depth_values.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts_depth_values.cpp +[ 54%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts_interface_exposure_values.cpp +[ 56%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts_simulating_unfolding.cpp In file included from /usr/include/c++/14/bits/stl_tree.h:63, from /usr/include/c++/14/set:62, from /build/reproducible-path/voronota-1.29.4370+ds/src/modes/../apollota/search_for_spherical_collisions.h:4, @@ -912,10 +952,6 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: destination object of size 8 allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ -[ 54%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts_interface_exposure_values.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts_interface_exposure_values.cpp -[ 56%] Building CXX object CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/voronota-1.29.4370+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++11 -MD -MT CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o -MF CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o.d -o CMakeFiles/voronota.dir/src/modes/mode_query_contacts_simulating_unfolding.cpp.o -c /build/reproducible-path/voronota-1.29.4370+ds/src/modes/mode_query_contacts_simulating_unfolding.cpp In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const long unsigned int; _Up = long unsigned int; bool _IsMove = false]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const long unsigned int*; _OI = long unsigned int*]' at /usr/include/c++/14/bits/stl_algobase.h:548:42, @@ -1184,8 +1220,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'voronota-dbgsym' in '../voronota-dbgsym_1.29.4370+ds-1~exp1_arm64.deb'. dpkg-deb: building package 'voronota' in '../voronota_1.29.4370+ds-1~exp1_arm64.deb'. +dpkg-deb: building package 'voronota-dbgsym' in '../voronota-dbgsym_1.29.4370+ds-1~exp1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../voronota_1.29.4370+ds-1~exp1_arm64.buildinfo dpkg-genchanges --build=binary -O../voronota_1.29.4370+ds-1~exp1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1193,12 +1229,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1736773/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4020880 and its subdirectories -I: Current time: Tue Aug 25 10:05:42 -12 2026 -I: pbuilder-time-stamp: 1787695542 +I: removing directory /srv/workspace/pbuilder/1736773 and its subdirectories +I: Current time: Thu Jul 24 05:48:36 +14 2025 +I: pbuilder-time-stamp: 1753285716