Diff of the two buildlogs: -- --- b1/build.log 2025-09-02 04:51:45.031040189 +0000 +++ b2/build.log 2025-09-02 05:03:58.099956501 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Oct 4 23:03:36 -12 2026 -I: pbuilder-time-stamp: 1791198216 +I: Current time: Tue Sep 2 18:51:46 +14 2025 +I: pbuilder-time-stamp: 1756788706 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -30,53 +30,85 @@ dpkg-source: info: applying pr1383.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3259731/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 2 04:52 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e22931f0ffb840ef908ad3282d530101' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3259731' - PS1='# ' - PS2='> ' + INVOCATION_ID=f91fff19c7c740a0ac758848e763942f + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3454903 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.dyw6Q5Gz/pbuilderrc_A0DW --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.dyw6Q5Gz/b1 --logfile b1/build.log nibabel_5.3.2-2.dsc' - SUDO_GID='110' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.dyw6Q5Gz/pbuilderrc_gPj5 --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.dyw6Q5Gz/b2 --logfile b2/build.log nibabel_5.3.2-2.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3259731/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -329,7 +361,7 @@ Get: 181 http://deb.debian.org/debian forky/main amd64 python3-werkzeug all 3.1.3-2 [207 kB] Get: 182 http://deb.debian.org/debian forky/main amd64 python3-pytest-httpserver all 1.1.3-1 [23.4 kB] Get: 183 http://deb.debian.org/debian forky/main amd64 python3-texext all 0.6.7-6 [22.6 kB] -Fetched 122 MB in 4s (28.2 MB/s) +Fetched 122 MB in 7s (18.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19897 files and directories currently installed.) @@ -926,8 +958,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Oct 5 11:04:51 UTC 2026. -Universal Time is now: Mon Oct 5 11:04:51 UTC 2026. +Local time is now: Tue Sep 2 04:54:56 UTC 2025. +Universal Time is now: Tue Sep 2 04:54:56 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -1103,7 +1135,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/nibabel-5.3.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../nibabel_5.3.2-2_source.changes +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/nibabel-5.3.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../nibabel_5.3.2-2_source.changes dpkg-buildpackage: info: source package nibabel dpkg-buildpackage: info: source version 5.3.2-2 dpkg-buildpackage: info: source distribution unstable @@ -1120,8 +1156,8 @@ make[1]: Entering directory '/build/reproducible-path/nibabel-5.3.2' /usr/bin/make clean make[2]: Entering directory '/build/reproducible-path/nibabel-5.3.2' -/bin/sh: 1: python: not found -/bin/sh: 1: git: not found +/bin/sh: line 1: python: command not found +/bin/sh: line 1: git: command not found /usr/bin/make -C doc clean make[3]: Entering directory '/build/reproducible-path/nibabel-5.3.2/doc' rm -rf source/reference/*.rst @@ -1338,17 +1374,17 @@ loading translations [en]... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. loading intersphinx inventory 'python' from https://docs.python.org/3/objects.inv ... -WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by NameResolutionError(": Failed to resolve 'docs.python.org' ([Errno -3] Temporary failure in name resolution)")) loading intersphinx inventory 'numpy' from https://numpy.org/doc/stable/objects.inv ... loading intersphinx inventory 'scipy' from https://docs.scipy.org/doc/scipy/objects.inv ... -WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://numpy.org/doc/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='numpy.org', port=443): Max retries exceeded with url: /doc/stable/objects.inv (Caused by NameResolutionError(": Failed to resolve 'numpy.org' ([Errno -3] Temporary failure in name resolution)")) loading intersphinx inventory 'matplotlib' from https://matplotlib.org/stable/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://docs.scipy.org/doc/scipy/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/scipy/objects.inv (Caused by NameResolutionError(": Failed to resolve 'docs.scipy.org' ([Errno -3] Temporary failure in name resolution)")) +intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by NameResolutionError(": Failed to resolve 'docs.python.org' ([Errno -3] Temporary failure in name resolution)")) +WARNING: failed to reach any of the inventories with the following issues: +intersphinx inventory 'https://numpy.org/doc/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='numpy.org', port=443): Max retries exceeded with url: /doc/stable/objects.inv (Caused by NameResolutionError(": Failed to resolve 'numpy.org' ([Errno -3] Temporary failure in name resolution)")) WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://matplotlib.org/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='matplotlib.org', port=443): Max retries exceeded with url: /stable/objects.inv (Caused by NameResolutionError(": Failed to resolve 'matplotlib.org' ([Errno -3] Temporary failure in name resolution)")) +intersphinx inventory 'https://docs.scipy.org/doc/scipy/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/scipy/objects.inv (Caused by NameResolutionError(": Failed to resolve 'docs.scipy.org' ([Errno -3] Temporary failure in name resolution)")) +WARNING: failed to reach any of the inventories with the following issues: +intersphinx inventory 'https://matplotlib.org/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='matplotlib.org', port=443): Max retries exceeded with url: /stable/objects.inv (Caused by NameResolutionError(": Failed to resolve 'matplotlib.org' ([Errno -3] Temporary failure in name resolution)")) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 127 source files that are out of date @@ -1578,9 +1614,9 @@ copying downloadable files... [100%] notebooks/cross_product_error.ipynb copying static files... -Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/documentation_options.js -Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/basic.css Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/language_data.js +Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/basic.css +Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/documentation_options.js Writing evaluated template result to /build/reproducible-path/nibabel-5.3.2/build/html/_static/sphinxdoc.css copying static files: done copying extra files... @@ -1750,10 +1786,10 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/nibabel-5.3.2' PYBUILD_SYSTEM=custom \ -PYBUILD_TEST_ARGS="PATH={dir}/.pybuild/cpython3_{version}/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PYTHONPATH={build_dir} LC_ALL=C.UTF-8 {interpreter} -m pytest --verbose" \ +PYBUILD_TEST_ARGS="PATH={dir}/.pybuild/cpython3_{version}/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PYTHONPATH={build_dir} LC_ALL=C.UTF-8 {interpreter} -m pytest --verbose" \ dh_auto_test dh_auto_test: warning: warning: pybuild does not support building out of source tree. In source building enforced. -I: pybuild base:311: PATH=/build/reproducible-path/nibabel-5.3.2/.pybuild/cpython3_3.13/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PYTHONPATH=/build/reproducible-path/nibabel-5.3.2/.pybuild/cpython3_3.13/build LC_ALL=C.UTF-8 python3.13 -m pytest --verbose +I: pybuild base:311: PATH=/build/reproducible-path/nibabel-5.3.2/.pybuild/cpython3_3.13/scripts:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PYTHONPATH=/build/reproducible-path/nibabel-5.3.2/.pybuild/cpython3_3.13/build LC_ALL=C.UTF-8 python3.13 -m pytest --verbose ============================= test session starts ============================== platform linux -- Python 3.13.7, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.13 cachedir: .pytest_cache @@ -7446,7 +7482,7 @@ mx = min(in_info.max, out_info.max * 2.0, 2**32) + inter -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -= 5339 passed, 101 skipped, 40 xfailed, 4 xpassed, 26982 warnings in 386.77s (0:06:26) = += 5339 passed, 101 skipped, 40 xfailed, 4 xpassed, 26982 warnings in 168.08s (0:02:48) = :0: ResourceWarning: unclosed file <_io.BufferedReader name='/build/reproducible-path/nibabel-5.3.2/nibabel/tests/data/tinypet.v'> make[1]: Leaving directory '/build/reproducible-path/nibabel-5.3.2' create-stamp debian/debhelper-build-stamp @@ -7484,17 +7520,17 @@ dh_installman build/*.1 make[1]: Leaving directory '/build/reproducible-path/nibabel-5.3.2' dh_python3 -O--buildsystem=pybuild -O--builddirectory=build -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-tck2trk -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-roi -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-ls -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-trk2tck I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-nifti-dx -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-dicomfs -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/parrec2nii -I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-diff I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-conform +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-ls +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-diff +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-dicomfs I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-convert I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-stats +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/parrec2nii +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-tck2trk +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-trk2tck +I: dh_python3 tools:114: replacing shebang in debian/python3-nibabel/usr/bin/nib-roi I: dh_python3 pydist:339: Ignoring complex environment marker: tomli; (python_version < '3.11') and extra == 'doc' dh_installsystemduser -O--buildsystem=pybuild -O--builddirectory=build dh_lintian -O--buildsystem=pybuild -O--builddirectory=build @@ -7518,8 +7554,8 @@ dh_gencontrol -O--buildsystem=pybuild -O--builddirectory=build dh_md5sums -O--buildsystem=pybuild -O--builddirectory=build dh_builddeb -O--buildsystem=pybuild -O--builddirectory=build -dpkg-deb: building package 'python-nibabel-doc' in '../python-nibabel-doc_5.3.2-2_all.deb'. dpkg-deb: building package 'python3-nibabel' in '../python3-nibabel_5.3.2-2_all.deb'. +dpkg-deb: building package 'python-nibabel-doc' in '../python-nibabel-doc_5.3.2-2_all.deb'. dpkg-genbuildinfo --build=binary -O../nibabel_5.3.2-2_amd64.buildinfo dpkg-genchanges --build=binary -O../nibabel_5.3.2-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -7528,12 +7564,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3454903/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3259731 and its subdirectories -I: Current time: Sun Oct 4 23:14:44 -12 2026 -I: pbuilder-time-stamp: 1791198884 +I: removing directory /srv/workspace/pbuilder/3454903 and its subdirectories +I: Current time: Tue Sep 2 19:03:57 +14 2025 +I: pbuilder-time-stamp: 1756789437