Diff of the two buildlogs: -- --- b1/build.log 2025-09-02 01:12:40.786819074 +0000 +++ b2/build.log 2025-09-02 01:16:15.875080012 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Sep 1 13:08:58 -12 2025 -I: pbuilder-time-stamp: 1756775338 +I: Current time: Mon Oct 5 21:35:42 +14 2026 +I: pbuilder-time-stamp: 1791185742 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying skip-one-test-on-i386.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/759931/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 5 07:35 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='7b7761c5858945caaa5e3453c63fe5a9' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='759931' - PS1='# ' - PS2='> ' + INVOCATION_ID=d8ea7183c4e84f3d895a7f880d4fc8a5 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1299585 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.75tysx1l/pbuilderrc_55JW --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.75tysx1l/b1 --logfile b1/build.log opentsne_1.0.2-2.dsc' - SUDO_GID='111' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.75tysx1l/pbuilderrc_K5UY --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.75tysx1l/b2 --logfile b2/build.log opentsne_1.0.2-2.dsc' + SUDO_GID=110 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/759931/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -228,7 +260,7 @@ Get: 96 http://deb.debian.org/debian forky/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 97 http://deb.debian.org/debian forky/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-8 [3980 kB] Get: 98 http://deb.debian.org/debian forky/main amd64 python3-sklearn all 1.4.2+dfsg-8 [2248 kB] -Fetched 68.8 MB in 1s (46.1 MB/s) +Fetched 68.8 MB in 1s (103 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19897 files and directories currently installed.) @@ -552,8 +584,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Sep 2 01:10:07 UTC 2025. -Universal Time is now: Tue Sep 2 01:10:07 UTC 2025. +Local time is now: Mon Oct 5 07:36:26 UTC 2026. +Universal Time is now: Mon Oct 5 07:36:26 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -649,7 +681,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/opentsne-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../opentsne_1.0.2-2_source.changes +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/opentsne-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../opentsne_1.0.2-2_source.changes dpkg-buildpackage: info: source package opentsne dpkg-buildpackage: info: source version 1.0.2-2 dpkg-buildpackage: info: source distribution unstable @@ -693,26 +729,26 @@ running build running build_py creating build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/callbacks.py -> build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE +copying openTSNE/initialization.py -> build/lib.linux-x86_64-cpython-313/openTSNE copying openTSNE/metrics.py -> build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/sklearn.py -> build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/affinity.py -> build/lib.linux-x86_64-cpython-313/openTSNE copying openTSNE/version.py -> build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/tsne.py -> build/lib.linux-x86_64-cpython-313/openTSNE +copying openTSNE/affinity.py -> build/lib.linux-x86_64-cpython-313/openTSNE +copying openTSNE/callbacks.py -> build/lib.linux-x86_64-cpython-313/openTSNE +copying openTSNE/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE copying openTSNE/utils.py -> build/lib.linux-x86_64-cpython-313/openTSNE copying openTSNE/nearest_neighbors.py -> build/lib.linux-x86_64-cpython-313/openTSNE -copying openTSNE/initialization.py -> build/lib.linux-x86_64-cpython-313/openTSNE -creating build/lib.linux-x86_64-cpython-313/openTSNE/dependencies -copying openTSNE/dependencies/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE/dependencies +copying openTSNE/sklearn.py -> build/lib.linux-x86_64-cpython-313/openTSNE +copying openTSNE/tsne.py -> build/lib.linux-x86_64-cpython-313/openTSNE creating build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul +creating build/lib.linux-x86_64-cpython-313/openTSNE/dependencies +copying openTSNE/dependencies/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE/dependencies creating build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/annoy running build_ext -creating build/reproducible-path/opentsne-1.0.2/tmp8fummzi8 -x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/opentsne-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c /build/reproducible-path/opentsne-1.0.2/tmp8fummzi8/omp.c -o build/reproducible-path/opentsne-1.0.2/tmp8fummzi8/omp.o -x86_64-linux-gnu-gcc build/reproducible-path/opentsne-1.0.2/tmp8fummzi8/omp.o -o /build/reproducible-path/opentsne-1.0.2/tmp8fummzi8/omp.c +creating build/reproducible-path/opentsne-1.0.2/tmp6nyo1cja +x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/opentsne-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c /build/reproducible-path/opentsne-1.0.2/tmp6nyo1cja/omp.c -o build/reproducible-path/opentsne-1.0.2/tmp6nyo1cja/omp.o +x86_64-linux-gnu-gcc build/reproducible-path/opentsne-1.0.2/tmp6nyo1cja/omp.o -o /build/reproducible-path/opentsne-1.0.2/tmp6nyo1cja/omp.c performance hint: openTSNE/quad_tree.pyx:73:5: Exception check on 'update_center_of_mass' will always require the GIL to be acquired. Possible solutions: 1. Declare 'update_center_of_mass' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. @@ -820,27 +856,27 @@ running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/callbacks.py -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/kl_divergence.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/_tsne.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/initialization.py -> build/bdist.linux-x86_64/wheel/./openTSNE copying build/lib.linux-x86_64-cpython-313/openTSNE/metrics.py -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/sklearn.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/version.py -> build/bdist.linux-x86_64/wheel/./openTSNE copying build/lib.linux-x86_64-cpython-313/openTSNE/affinity.py -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/_tsne.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/callbacks.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/quad_tree.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE +creating build/bdist.linux-x86_64/wheel/openTSNE/_matrix_mul +copying build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul/matrix_mul.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE/_matrix_mul +copying build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE/_matrix_mul creating build/bdist.linux-x86_64/wheel/openTSNE/dependencies copying build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE/dependencies creating build/bdist.linux-x86_64/wheel/openTSNE/dependencies/annoy -copying build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/annoy/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE/dependencies/annoy copying build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/annoy/annoylib.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE/dependencies/annoy -creating build/bdist.linux-x86_64/wheel/openTSNE/_matrix_mul -copying build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE/_matrix_mul -copying build/lib.linux-x86_64-cpython-313/openTSNE/_matrix_mul/matrix_mul.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE/_matrix_mul -copying build/lib.linux-x86_64-cpython-313/openTSNE/quad_tree.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/kl_divergence.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/version.py -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/tsne.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/dependencies/annoy/__init__.py -> build/bdist.linux-x86_64/wheel/./openTSNE/dependencies/annoy copying build/lib.linux-x86_64-cpython-313/openTSNE/utils.py -> build/bdist.linux-x86_64/wheel/./openTSNE copying build/lib.linux-x86_64-cpython-313/openTSNE/nearest_neighbors.py -> build/bdist.linux-x86_64/wheel/./openTSNE -copying build/lib.linux-x86_64-cpython-313/openTSNE/initialization.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/sklearn.py -> build/bdist.linux-x86_64/wheel/./openTSNE +copying build/lib.linux-x86_64-cpython-313/openTSNE/tsne.py -> build/bdist.linux-x86_64/wheel/./openTSNE running install_egg_info running egg_info creating openTSNE.egg-info @@ -857,7 +893,7 @@ Copying openTSNE.egg-info to build/bdist.linux-x86_64/wheel/./openTSNE-1.0.2.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/opentsne-1.0.2.dist-info/WHEEL -creating '/build/reproducible-path/opentsne-1.0.2/.pybuild/cpython3_3.13_opentsne/.tmp-cs390mzk/opentsne-1.0.2-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it +creating '/build/reproducible-path/opentsne-1.0.2/.pybuild/cpython3_3.13_opentsne/.tmp-7kmx2anp/opentsne-1.0.2-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'openTSNE/__init__.py' adding 'openTSNE/_tsne.cpython-313-x86_64-linux-gnu.so' adding 'openTSNE/affinity.py' @@ -917,7 +953,7 @@ warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -============ 137 passed, 26 skipped, 7 warnings in 67.83s (0:01:07) ============ +============ 137 passed, 26 skipped, 7 warnings in 68.36s (0:01:08) ============ create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -952,12 +988,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1299585/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/759931 and its subdirectories -I: Current time: Mon Sep 1 13:12:40 -12 2025 -I: pbuilder-time-stamp: 1756775560 +I: removing directory /srv/workspace/pbuilder/1299585 and its subdirectories +I: Current time: Mon Oct 5 21:39:15 +14 2026 +I: pbuilder-time-stamp: 1791185955