Diff of the two buildlogs: -- --- b1/build.log 2025-09-06 14:35:56.537688922 +0000 +++ b2/build.log 2025-09-06 14:47:51.988077071 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Oct 9 08:43:59 -12 2026 -I: pbuilder-time-stamp: 1791578639 +I: Current time: Sun Sep 7 04:35:59 +14 2025 +I: pbuilder-time-stamp: 1757169359 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: unpacking plastimatch_1.10.0+dfsg.1-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3849/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 6 14:36 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='24687faeb6d9491c94b26b755b5914c9' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3849' - PS1='# ' - PS2='> ' + INVOCATION_ID=fafe415d0b4d49899812fc75e53c85a2 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=282948 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ND4wINQJ/pbuilderrc_vaVm --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ND4wINQJ/b1 --logfile b1/build.log plastimatch_1.10.0+dfsg.1-1.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ND4wINQJ/pbuilderrc_zAw3 --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ND4wINQJ/b2 --logfile b2/build.log plastimatch_1.10.0+dfsg.1-1.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3849/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -814,7 +846,7 @@ Get: 677 http://deb.debian.org/debian forky/main amd64 libnifti-dev all 3.0.1-9.1 [8912 B] Get: 678 http://deb.debian.org/debian forky/main amd64 libminc-dev amd64 2.4.06-2.1+b4 [70.0 kB] Get: 679 http://deb.debian.org/debian forky/main amd64 libinsighttoolkit5-dev amd64 5.4.3-5 [3316 kB] -Fetched 678 MB in 16s (41.5 MB/s) +Fetched 678 MB in 12s (54.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libsystemd-shared:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19897 files and directories currently installed.) @@ -2997,8 +3029,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Oct 9 20:51:12 UTC 2026. -Universal Time is now: Fri Oct 9 20:51:12 UTC 2026. +Local time is now: Sat Sep 6 14:41:22 UTC 2025. +Universal Time is now: Sat Sep 6 14:41:22 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... @@ -3800,7 +3832,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../plastimatch_1.10.0+dfsg.1-1_source.changes +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../plastimatch_1.10.0+dfsg.1-1_source.changes dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.10.0+dfsg.1-1 dpkg-buildpackage: info: source distribution unstable @@ -4087,8 +4123,8 @@ -- Trying to find DCMTK expecting DCMTKConfig.cmake - ok -- Appending /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -- Not appending /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.2 --- Configuring done (15.6s) --- Generating done (0.4s) +-- Configuring done (16.4s) +-- Generating done (0.8s) CMake Warning: Manually-specified variables were not used by the project: @@ -4104,7 +4140,7 @@ -- Build files have been written to: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1' dh_auto_build - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/plastimatch-1.10.0+dfsg.1 -B/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -4112,117 +4148,117 @@ make[2]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake "--color=" make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make -f src/sys/CMakeFiles/plmsys.dir/build.make src/sys/CMakeFiles/plmsys.dir/depend make -f src/clp/CMakeFiles/plmclp.dir/build.make src/clp/CMakeFiles/plmclp.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/specfun /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp/CMakeFiles/plmclp.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys/CMakeFiles/plmsys.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/specfun /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f 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'/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/sys/CMakeFiles/plmsys.dir/build.make src/sys/CMakeFiles/plmsys.dir/build +make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build +make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/sys/CMakeFiles/plmsys.dir/build.make src/sys/CMakeFiles/plmsys.dir/build make -f src/clp/CMakeFiles/plmclp.dir/build.make src/clp/CMakeFiles/plmclp.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory 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Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -MF CMakeFiles/lbfgs.dir/lib/lbfgs.c.o.d -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong 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/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -MF CMakeFiles/lbfgs.dir/lib/lbfgs.c.o.d -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o -MF CMakeFiles/plmsys.dir/dlib_threads.cxx.o.d -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/dlib_threads.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -MF CMakeFiles/inih.dir/ini.c.o.d -o CMakeFiles/inih.dir/ini.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29/ini.c cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o -MF CMakeFiles/plmsys.dir/dir_list.cxx.o.d -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/dir_list.cxx -[ 0%] Building CXX object src/sys/CMakeFiles/plmsys.dir/option_range.cxx.o -[ 0%] Building CXX object src/sys/CMakeFiles/plmsys.dir/logfile.cxx.o -[ 0%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o +[ 1%] Building CXX object src/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o +[ 1%] Building CXX object src/sys/CMakeFiles/plmsys.dir/logfile.cxx.o +[ 1%] Building CXX object src/sys/CMakeFiles/plmsys.dir/option_range.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/logfile.cxx.o -MF CMakeFiles/plmsys.dir/logfile.cxx.o.d -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/logfile.cxx -[ 1%] Building CXX object src/sys/CMakeFiles/plmsys.dir/file_util.cxx.o -[ 2%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o -MF CMakeFiles/specfun.dir/mpbdv.c.o.d -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/specfun/mpbdv.c +[ 2%] Building CXX object src/sys/CMakeFiles/plmsys.dir/file_util.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -MD -MT src/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o -MF CMakeFiles/plmclp.dir/plm_clp.cxx.o.d -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp/plm_clp.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/file_util.cxx.o -MF CMakeFiles/plmsys.dir/file_util.cxx.o.d -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/file_util.cxx -[ 2%] Building CXX object src/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o -[ 2%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o -[ 2%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o -MF CMakeFiles/inih.dir/INIReader.cpp.o.d -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29/INIReader.cpp cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/option_range.cxx.o -MF CMakeFiles/plmsys.dir/option_range.cxx.o.d -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/option_range.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o -MF CMakeFiles/plmsys.dir/dlib_threads.cxx.o.d -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/dlib_threads.cxx -[ 2%] Building CXX object src/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o -[ 2%] Building CXX object src/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o +[ 2%] Linking CXX static library ../../libdevillard.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 [ 2%] Building CXX object src/sys/CMakeFiles/plmsys.dir/path_util.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o -MF CMakeFiles/plmsys.dir/plm_sleep.cxx.o.d -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/plm_sleep.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -MF CMakeFiles/inih.dir/ini.c.o.d -o CMakeFiles/inih.dir/ini.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29/ini.c -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-cpp -MD -MT libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o -MF CMakeFiles/devillard.dir/wirth.cpp.o.d -o CMakeFiles/devillard.dir/wirth.cpp.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard/wirth.cpp -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o -MF CMakeFiles/plmsys.dir/plm_endian.cxx.o.d -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/plm_endian.cxx +/usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o +/usr/bin/ranlib ../../libdevillard.a +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 3%] Built target devillard +[ 3%] Building CXX object src/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -MF CMakeFiles/plmsys.dir/plm_fwrite.cxx.o.d -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/plm_fwrite.cxx -[ 3%] Linking CXX static library ../../libdevillard.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 +[ 3%] Building CXX object src/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o -MF CMakeFiles/plmsys.dir/plm_sleep.cxx.o.d -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/plm_sleep.cxx +[ 3%] Linking C static library ../../libspecfun.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake +[ 3%] Linking CXX static library ../../libnkidecompress.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 [ 3%] Building CXX object src/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o -MF CMakeFiles/plmsys.dir/plm_timer.cxx.o.d -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/plm_timer.cxx [ 4%] Building CXX object src/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o -/usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o -/usr/bin/ranlib ../../libdevillard.a cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac 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CMakeFiles/plmsys.dir/delayload_legacy.c.o.d -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/delayload_legacy.c cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/sys/CMakeFiles/plmsys.dir/string_util.cxx.o -MF CMakeFiles/plmsys.dir/string_util.cxx.o.d -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/string_util.cxx -[ 4%] Linking CXX static library ../../libnkidecompress.a -[ 4%] Linking C static library ../../libspecfun.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 +[ 4%] Building C object src/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/sys && /usr/bin/cc -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.4 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT src/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o -MF CMakeFiles/plmsys.dir/delayload_legacy.c.o.d -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys/delayload_legacy.c +[ 4%] Built target specfun /usr/bin/ar qc ../../libnkidecompress.a CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o /usr/bin/ranlib ../../libnkidecompress.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 4%] Built target nkidecompress -/usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o -/usr/bin/ranlib ../../libspecfun.a -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 4%] Built target specfun [ 4%] Linking CXX static library ../../libinih.a +[ 4%] Built target nkidecompress cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 +[ 4%] Linking C static library ../../liblbfgs.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake /usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o /usr/bin/ranlib ../../libinih.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 4%] Built target inih -[ 4%] Linking C static library ../../liblbfgs.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 +[ 4%] Built target inih /usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o /usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' @@ -4239,33 +4275,40 @@ make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f src/base/CMakeFiles/plmbase.dir/build.make src/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 4%] Building CXX object src/base/CMakeFiles/plmbase.dir/aperture.cxx.o -[ 4%] Building CXX object src/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o -[ 5%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o [ 5%] Building CXX object src/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o -[ 5%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o -MF CMakeFiles/plmbase.dir/astroid_dose.cxx.o.d -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/astroid_dose.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o -MF CMakeFiles/plmbase.dir/beam_geometry.cxx.o.d -o CMakeFiles/plmbase.dir/beam_geometry.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/beam_geometry.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o -MF CMakeFiles/plmbase.dir/bspline_header.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_header.cxx -[ 5%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -[ 5%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/aperture.cxx.o -MF CMakeFiles/plmbase.dir/aperture.cxx.o.d -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/aperture.cxx [ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o +[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -MF CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_interpolate.cxx +[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o -MF CMakeFiles/plmbase.dir/astroid_dose.cxx.o.d -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/astroid_dose.cxx +[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o +[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o +[ 4%] Building CXX object src/base/CMakeFiles/plmbase.dir/aperture.cxx.o +[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o -MF CMakeFiles/plmbase.dir/bspline_warp.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_warp.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/aperture.cxx.o -MF CMakeFiles/plmbase.dir/aperture.cxx.o.d -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/aperture.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o -MF CMakeFiles/plmbase.dir/bspline_header.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_header.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o -MF CMakeFiles/plmbase.dir/beam_geometry.cxx.o.d -o CMakeFiles/plmbase.dir/beam_geometry.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/beam_geometry.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o -MF CMakeFiles/plmbase.dir/bspline_xform.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_xform.cxx -[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o -[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o -[ 6%] Building CXX object src/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -MF CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/bspline_interpolate.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment 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/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o -MF CMakeFiles/plmbase.dir/cxt_extract.cxx.o.d -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/cxt_extract.cxx -[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o +[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o +[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o -MF CMakeFiles/plmbase.dir/dicom_probe.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dicom_probe.cxx +[ 7%] Building CXX object src/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o -MF CMakeFiles/plmbase.dir/dicom_util.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dicom_util.cxx -[ 8%] Building CXX object src/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o +[ 7%] Linking CXX static library ../../libplmclp.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o +/usr/bin/ranlib ../../libplmclp.a +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 7%] Built target plmclp +[ 8%] Building CXX object src/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o -MF CMakeFiles/plmbase.dir/direction_cosines.cxx.o.d -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/direction_cosines.cxx +[ 8%] Building CXX object src/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o -MF CMakeFiles/plmbase.dir/direction_matrices.cxx.o.d -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/direction_matrices.cxx [ 8%] Building CXX object src/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o -MF CMakeFiles/plmbase.dir/exchkeys.cxx.o.d -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/exchkeys.cxx @@ -4273,13 +4316,6 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o -MF CMakeFiles/plmbase.dir/float_pair_list.cxx.o.d -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/float_pair_list.cxx [ 9%] Building CXX object src/base/CMakeFiles/plmbase.dir/gaussian.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/gaussian.cxx.o -MF CMakeFiles/plmbase.dir/gaussian.cxx.o.d -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/gaussian.cxx -[ 9%] Linking CXX static library ../../libplmclp.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o -/usr/bin/ranlib ../../libplmclp.a -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 9%] Built target plmclp [ 9%] Building CXX object src/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o -MF CMakeFiles/plmbase.dir/hnd_io.cxx.o.d -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/hnd_io.cxx [ 9%] Building CXX object src/base/CMakeFiles/plmbase.dir/image_stats.cxx.o @@ -4302,10 +4338,10 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_create.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_create.cxx [ 12%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_header_compare.cxx -[ 12%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_char.cxx [ 12%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_double.cxx +[ 12%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_char.cxx [ 12%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_float.cxx [ 13%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o @@ -4313,15 +4349,7 @@ [ 13%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int64.cxx [ 13%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -[ 13%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uchar.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_short.cxx -[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx -[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx -[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_ushort.cxx In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_char.cxx:6: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = char; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_char.cxx:21:27: required from here @@ -4352,11 +4380,13 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_float.cxx:6: -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = float; typename itk::Image::Pointer = itk::SmartPointer >]': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_float.cxx:20:27: required from here - 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 13%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uchar.cxx +In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int32.cxx:6: +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = int; typename itk::Image::Pointer = itk::SmartPointer >]': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int32.cxx:20:27: required from here + 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ @@ -4366,10 +4396,10 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int32.cxx:6: -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = int; typename itk::Image::Pointer = itk::SmartPointer >]': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int32.cxx:20:27: required from here - 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); +In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int64.cxx:6: +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long int; typename itk::Image::Pointer = itk::SmartPointer >]': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int64.cxx:20:27: required from here + 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", @@ -4380,6 +4410,24 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} +In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_float.cxx:6: +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = float; typename itk::Image::Pointer = itk::SmartPointer >]': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_float.cxx:20:27: required from here + 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] + 140 | "Error: unhandled file type for loading image (%d) %s\n", + | ~^ + | | + | int + 141 | componentType, fname); + | ~~~~~~~~~~~~~ + | | + | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} +[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx +[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_short.cxx:6: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_short.cxx:20:27: required from here @@ -4394,8 +4442,6 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_vec.cxx In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uchar.cxx:6: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned char; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uchar.cxx:20:27: required from here @@ -4412,10 +4458,10 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx:6: -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx:20:27: required from here - 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); +In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx:6: +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx:20:27: required from here + 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", @@ -4426,26 +4472,12 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -[ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_origin.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_origin.cxx -In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int64.cxx:6: -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long int; typename itk::Image::Pointer = itk::SmartPointer >]': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_int64.cxx:20:27: required from here - 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] - 140 | "Error: unhandled file type for loading image (%d) %s\n", - | ~^ - | | - | int - 141 | componentType, fname); - | ~~~~~~~~~~~~~ - | | - | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx:6: -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint32.cxx:20:27: required from here - 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); +[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_ushort.cxx +In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx:6: +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_uint64.cxx:20:27: required from here + 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", @@ -4456,8 +4488,8 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} -[ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_region.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_region.cxx +[ 14%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_vec.cxx In file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_ushort.cxx:6: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_load_ushort.cxx:20:27: required from here @@ -4472,6 +4504,10 @@ | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} +[ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_origin.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_origin.cxx +[ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_region.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_region.cxx [ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_save.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/itk_image_save.cxx [ 15%] Building CXX object src/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o @@ -4504,10 +4540,6 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/plm_image.cxx.o -MF CMakeFiles/plmbase.dir/plm_image.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_image.cxx [ 19%] Building CXX object src/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_convert.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_image_convert.cxx -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_file_format.cxx:97:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 97 | fgets (line, MAX_LINE, fp); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object src/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_header.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_image_header.cxx [ 20%] Building CXX object src/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o @@ -4518,6 +4550,10 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o -MF CMakeFiles/plmbase.dir/plm_warp.cxx.o.d -o CMakeFiles/plmbase.dir/plm_warp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_warp.cxx [ 20%] Building CXX object src/base/CMakeFiles/plmbase.dir/pointset.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/pointset.cxx.o -MF CMakeFiles/plmbase.dir/pointset.cxx.o.d -o CMakeFiles/plmbase.dir/pointset.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/pointset.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/plm_file_format.cxx:97:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 97 | fgets (line, MAX_LINE, fp); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Labeled_point]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/pointset.cxx:65:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | fgets (s, 1024, fp); @@ -4550,6 +4586,26 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -MF CMakeFiles/plmbase.dir/rasterize_slice.cxx.o.d -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rasterize_slice.cxx [ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o -MF CMakeFiles/plmbase.dir/rasterizer.cxx.o.d -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rasterizer.cxx +[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -MF CMakeFiles/plmbase.dir/raw_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx +[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/ray_trace_probe.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_fcsv(const char*)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx:81:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 81 | fgets (s, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_txt(const char*)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 135 | fgets (s, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~ +[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/ray_trace_uniform.cxx +[ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rpl_volume.cxx +[ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rpl_volume_lut.cxx +[ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -MF CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o.d -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtds_dcmtk.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/proj_volume.cxx: In member function 'void Proj_volume::save_header(const char*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/proj_volume.cxx:299:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 299 | fprintf (fp, "num_steps=%d\n", d_ptr->num_steps); @@ -4577,28 +4633,16 @@ | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka long int} -[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -MF CMakeFiles/plmbase.dir/raw_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx -[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/ray_trace_probe.cxx -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_fcsv(const char*)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx:81:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 81 | fgets (s, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_txt(const char*)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/raw_pointset.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 135 | fgets (s, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~ -[ 23%] Building CXX object src/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard 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/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/ray_trace_uniform.cxx -[ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rpl_volume.cxx -[ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 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-Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -MF CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o.d -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtds_dcmtk.cxx [ 24%] Building CXX object src/base/CMakeFiles/plmbase.dir/rt_study.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rt_study.cxx.o -MF CMakeFiles/plmbase.dir/rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rt_study.cxx +[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -MF CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rt_study_metadata.cxx +[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o -MF CMakeFiles/plmbase.dir/rtog_io.cxx.o.d -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtog_io.cxx +[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtss.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common 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-Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtss.cxx.o -MF CMakeFiles/plmbase.dir/rtss.cxx.o.d -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtss.cxx +[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -MF CMakeFiles/plmbase.dir/rtss_contour.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtss_contour.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rpl_volume.cxx: In member function 'void Rpl_volume::apply_beam_modifiers()': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rpl_volume.cxx:1471:22: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 1471 | printf ("ires = %d %d\n", ires[0], ires[1]); @@ -4612,14 +4656,6 @@ | | | | int long int | %ld -[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -MF CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rt_study_metadata.cxx -[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o -MF CMakeFiles/plmbase.dir/rtog_io.cxx.o.d -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtog_io.cxx -[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtss.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtss.cxx.o -MF CMakeFiles/plmbase.dir/rtss.cxx.o.d -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtss.cxx -[ 25%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -MF CMakeFiles/plmbase.dir/rtss_contour.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtss_contour.cxx [ 26%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o -MF CMakeFiles/plmbase.dir/rtss_roi.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/rtss_roi.cxx [ 26%] Building CXX object src/base/CMakeFiles/plmbase.dir/rtplan.cxx.o @@ -4665,9 +4701,9 @@ [ 31%] Building CXX object src/base/CMakeFiles/plmbase.dir/volume_header.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/volume_header.cxx.o -MF CMakeFiles/plmbase.dir/volume_header.cxx.o.d -o CMakeFiles/plmbase.dir/volume_header.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/volume_header.cxx [ 31%] Building CXX object src/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o -MF CMakeFiles/plmbase.dir/volume_limit.cxx.o.d -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/volume_limit.cxx [ 32%] Building CXX object src/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o -MF CMakeFiles/plmbase.dir/volume_resample.cxx.o.d -o CMakeFiles/plmbase.dir/volume_resample.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/volume_resample.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o -MF CMakeFiles/plmbase.dir/volume_limit.cxx.o.d -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/volume_limit.cxx [ 32%] Building CXX object src/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o -MF CMakeFiles/plmbase.dir/volume_stats.cxx.o.d -o CMakeFiles/plmbase.dir/volume_stats.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/volume_stats.cxx [ 32%] Building CXX object src/base/CMakeFiles/plmbase.dir/xform.cxx.o @@ -4680,9 +4716,9 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xform_point.cxx.o -MF CMakeFiles/plmbase.dir/xform_point.cxx.o.d -o CMakeFiles/plmbase.dir/xform_point.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_point.cxx [ 33%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_ct.cxx -[ 33%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o [ 34%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_ct_transform.cxx +[ 34%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o -MF CMakeFiles/plmbase.dir/xio_demographic.cxx.o.d -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_demographic.cxx [ 34%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o -MF CMakeFiles/plmbase.dir/xio_dir.cxx.o.d -o CMakeFiles/plmbase.dir/xio_dir.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_dir.cxx @@ -4692,6 +4728,13 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o -MF CMakeFiles/plmbase.dir/xio_patient.cxx.o.d -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_patient.cxx [ 35%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o -MF CMakeFiles/plmbase.dir/xio_plan.cxx.o.d -o CMakeFiles/plmbase.dir/xio_plan.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_plan.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx:230:40: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::TransformBaseTemplate::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] + 230 | printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); + | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + | | | + | int itk::TransformBaseTemplate::NumberOfParametersType {aka long unsigned int} + | %ld [ 35%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o -MF CMakeFiles/plmbase.dir/xio_structures.cxx.o.d -o CMakeFiles/plmbase.dir/xio_structures.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx [ 35%] Building CXX object src/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o @@ -4706,42 +4749,6 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_metadata.cxx [ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_module.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_module.cxx -[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rdd.cxx -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx:230:40: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::TransformBaseTemplate::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] - 230 | printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); - | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - | | | - | int itk::TransformBaseTemplate::NumberOfParametersType {aka long unsigned int} - | %ld -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx: In function 'void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:121:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 121 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:122:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 122 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:123:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 123 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:124:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 124 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:125:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 125 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 135 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:142:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 142 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:184:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 184 | fgets (buf, 1024, fp); - | ~~~~~~^~~~~~~~~~~~~~~ -[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtdose.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx: In function 'void xform_legacy_load(Xform*, FILE*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx:37:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 37 | fgets (buf,1024,fp); @@ -4767,10 +4774,10 @@ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xform_legacy.cxx:168:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ -[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtss.cxx -[ 38%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtplan.cxx +[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rdd.cxx +[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtdose.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_dose.cxx: In function 'void xio_dose_load_header(Xio_dose_header*, const char*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_dose.cxx:73:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fgets (line1, sizeof(line1), fp); @@ -4799,6 +4806,35 @@ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_dose.cxx:135:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 37%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtss.cxx +[ 38%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rtplan.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx: In function 'void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:121:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 121 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:122:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 122 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:123:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 123 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:124:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 124 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:125:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 125 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 135 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:142:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 142 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/xio_structures.cxx:184:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 184 | fgets (buf, 1024, fp); + | ~~~~~~^~~~~~~~~~~~~~~ [ 38%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_rt_study.cxx [ 38%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o @@ -4810,9 +4846,7 @@ [ 39%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_uid.cxx [ 39%] Building CXX object src/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -[ 40%] Building CXX object src/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_util.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base/dcmtk_util.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 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/usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt @@ -4844,38 +4880,38 @@ make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f src/util/CMakeFiles/plmutil.dir/build.make src/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 41%] Building CXX object src/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o +[ 40%] Building CXX object src/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o +[ 40%] Building CXX object src/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o -MF CMakeFiles/plmutil.dir/dice_statistics.cxx.o.d -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/dice_statistics.cxx [ 41%] Building CXX object src/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/diff.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/dvh.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/distance_map.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -MF CMakeFiles/plmutil.dir/bspline_correspond.cxx.o.d -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/bspline_correspond.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o -MF CMakeFiles/plmutil.dir/dice_statistics.cxx.o.d -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/dice_statistics.cxx -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o -[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/image_center.cxx.o -[ 43%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -MF CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o.d -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/dicom_sro_save.cxx -[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o +[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o +[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/distance_map.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/util/CMakeFiles/plmutil.dir/distance_map.cxx.o -MF CMakeFiles/plmutil.dir/distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/distance_map.cxx -[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/diff.cxx.o -MF CMakeFiles/plmutil.dir/diff.cxx.o.d -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/diff.cxx +[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o +[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/dvh.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/dvh.cxx.o -MF CMakeFiles/plmutil.dir/dvh.cxx.o.d -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/dvh.cxx +[ 42%] Building CXX object src/util/CMakeFiles/plmutil.dir/image_center.cxx.o +[ 43%] Building CXX object src/util/CMakeFiles/plmutil.dir/diff.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -MF CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o.d -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/hausdorff_distance.cxx +[ 43%] Building CXX object src/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/diff.cxx.o -MF CMakeFiles/plmutil.dir/diff.cxx.o.d -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/diff.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -MF CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o.d -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/gamma_dose_comparison.cxx -[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -MF CMakeFiles/plmutil.dir/geometry_chooser.cxx.o.d -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/geometry_chooser.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -MF CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o.d -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/hausdorff_distance.cxx +[ 43%] Building CXX object src/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o -MF CMakeFiles/plmutil.dir/image_boundary.cxx.o.d -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/image_boundary.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/util/CMakeFiles/plmutil.dir/image_center.cxx.o -MF CMakeFiles/plmutil.dir/image_center.cxx.o.d -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/image_center.cxx +[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o -MF CMakeFiles/plmutil.dir/itk_adjust.cxx.o.d -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_adjust.cxx +[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o -MF CMakeFiles/plmutil.dir/itk_crop.cxx.o.d -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_crop.cxx +[ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -MF CMakeFiles/plmutil.dir/itk_distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_distance_map.cxx [ 44%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o -MF CMakeFiles/plmutil.dir/itk_gabor.cxx.o.d -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_gabor.cxx [ 45%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -MF CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o.d -o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_histogram_matching.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o -MF CMakeFiles/plmutil.dir/itk_gabor.cxx.o.d -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_gabor.cxx [ 45%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o -MF CMakeFiles/plmutil.dir/itk_intersect.cxx.o.d -o CMakeFiles/plmutil.dir/itk_intersect.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/itk_intersect.cxx [ 45%] Building CXX object src/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o @@ -4918,10 +4954,6 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o -MF CMakeFiles/plmutil.dir/xf_invert.cxx.o.d -o CMakeFiles/plmutil.dir/xf_invert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/xf_invert.cxx [ 50%] Building CXX object src/util/CMakeFiles/plmutil.dir/zcrop.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/zcrop.cxx.o -MF CMakeFiles/plmutil.dir/zcrop.cxx.o.d -o CMakeFiles/plmutil.dir/zcrop.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/zcrop.cxx -[ 50%] Building CXX object src/util/CMakeFiles/plmutil.dir/gabor.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/gabor.cxx.o -MF CMakeFiles/plmutil.dir/gabor.cxx.o.d -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/gabor.cxx -[ 51%] Building CXX object src/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -MF CMakeFiles/plmutil.dir/ramp_filter.cxx.o.d -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/ramp_filter.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/threshbox.cxx: In function 'void do_overlap_fraction(Threshbox_parms*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/threshbox.cxx:257:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 257 | fscanf(fp1, "%s", tmpbuf); @@ -4935,6 +4967,10 @@ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/threshbox.cxx:267:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 267 | fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 50%] Building CXX object src/util/CMakeFiles/plmutil.dir/gabor.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/gabor.cxx.o -MF CMakeFiles/plmutil.dir/gabor.cxx.o.d -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/gabor.cxx +[ 51%] Building CXX object src/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -MF CMakeFiles/plmutil.dir/ramp_filter.cxx.o.d -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util/ramp_filter.cxx [ 51%] Linking CXX shared library ../../libplmutil.so cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmutil.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmutil.so.1.10 -o ../../libplmutil.so.1.10 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o CMakeFiles/plmutil.dir/dice_statistics.cxx.o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o CMakeFiles/plmutil.dir/distance_map.cxx.o CMakeFiles/plmutil.dir/diff.cxx.o CMakeFiles/plmutil.dir/dvh.cxx.o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o 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-lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl ../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt @@ -4951,50 +4987,56 @@ make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register/CMakeFiles/plmregister.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/dose/CMakeFiles/plmdose.dir/build.make src/dose/CMakeFiles/plmdose.dir/build -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f src/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/reconstruct/CMakeFiles/plmreconstruct.dir/build +make -f src/dose/CMakeFiles/plmdose.dir/build.make src/dose/CMakeFiles/plmdose.dir/build +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/register/CMakeFiles/plmregister.dir/build.make src/register/CMakeFiles/plmregister.dir/build +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 51%] Building CXX object src/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o -[ 52%] Building CXX object src/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -[ 52%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o -[ 52%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 52%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o +[ 52%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o +[ 52%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -MF CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o.d -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/bowtie_correction.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_options.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr_options.cxx [ 53%] Building CXX object src/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o -[ 52%] Building CXX object src/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o -MF CMakeFiles/plmdose.dir/bragg_curve.cxx.o.d -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/bragg_curve.cxx -[ 53%] Building CXX object src/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o -[ 52%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o +[ 53%] Building CXX object src/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o -MF CMakeFiles/plmdose.dir/beam_calc.cxx.o.d -o CMakeFiles/plmdose.dir/beam_calc.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_calc.cxx -[ 54%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o +[ 53%] Building CXX object src/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o -MF CMakeFiles/plmdose.dir/bragg_curve.cxx.o.d -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/bragg_curve.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o -MF CMakeFiles/plmdose.dir/beam_map.cxx.o.d -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_map.cxx +[ 53%] Building CXX object src/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o +[ 53%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o +[ 53%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/fdk.cxx +[ 54%] Building CXX object src/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr_trilin.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o -MF CMakeFiles/plmdose.dir/compute_dose.cxx.o.d -o CMakeFiles/plmdose.dir/compute_dose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/compute_dose.cxx -[ 54%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -[ 54%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -[ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o +[ 54%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o +[ 54%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline.cxx.o -MF CMakeFiles/plmregister.dir/bspline.cxx.o.d -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -MF CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o.d -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/dose_volume_functions.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -MF CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_landmarks.cxx +[ 54%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o -MF CMakeFiles/plmregister.dir/bspline_gm.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_gm.cxx +[ 55%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mi.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_mi.cxx +[ 55%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/fdk_util.cxx [ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o -MF CMakeFiles/plmdose.dir/particle_type.cxx.o.d -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/particle_type.cxx +[ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -MF CMakeFiles/plmdose.dir/rt_beam_model.cxx.o.d -o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_beam_model.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o -MF CMakeFiles/plmdose.dir/beam_map.cxx.o.d -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_map.cxx +[ 55%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mse.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_mse.cxx +[ 55%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize.cxx +[ 55%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_lbfgsb.cxx +[ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -MF CMakeFiles/plmdose.dir/rt_parms.cxx.o.d -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_parms.cxx -[ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -MF CMakeFiles/plmdose.dir/plan_calc.cxx.o.d -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/plan_calc.cxx -[ 55%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -MF CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o.d -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/bowtie_correction.cxx -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/register/CMakeFiles/plmregister.dir/build.make src/register/CMakeFiles/plmregister.dir/build -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 55%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline.cxx.o -MF CMakeFiles/plmregister.dir/bspline.cxx.o.d -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline.cxx -[ 55%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o -MF CMakeFiles/plmdose.dir/rt_sigma.cxx.o.d -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_sigma.cxx -[ 56%] Building CXX object src/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -MF CMakeFiles/plmdose.dir/wed_parms.cxx.o.d -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/wed_parms.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load(const char*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fgets (linebuf, 128, fp); @@ -5015,14 +5057,63 @@ /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ -[ 56%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr.cxx -[ 56%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -MF CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_landmarks.cxx -[ 56%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o -MF CMakeFiles/plmregister.dir/bspline_gm.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_gm.cxx -[ 57%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_options.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr_options.cxx +[ 56%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o +[ 57%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_liblbfgs.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o -MF CMakeFiles/plmdose.dir/rt_dij.cxx.o.d -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_dij.cxx +[ 57%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_nlopt.cxx +[ 57%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o -MF CMakeFiles/plmdose.dir/rt_lut.cxx.o.d -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_lut.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_calc.cxx: In member function 'bool Beam_calc::load(const char*)': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_calc.cxx:194:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 194 | fgets (linebuf, 128, fp); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +[ 58%] Linking CXX shared library ../../libplmreconstruct.so +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmreconstruct.dir/link.d 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-lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ldl /usr/lib/x[ 58%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_steepest.cxx +[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -MF CMakeFiles/plmregister.dir/bspline_parms.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_parms.cxx +[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -MF CMakeFiles/plmregister.dir/bspline_score.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_score.cxx +86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../libdevillard.a +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../libplmreconstruct.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmreconstruct.so +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 59%] Built target plmreconstruct +[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -MF CMakeFiles/plmregister.dir/bspline_stage.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_stage.cxx +[ 59%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -MF CMakeFiles/plmdose.dir/rt_spot_map.cxx.o.d -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_spot_map.cxx +[ 59%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o -MF CMakeFiles/plmdose.dir/rt_mebs.cxx.o.d -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_mebs.cxx +[ 60%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -MF CMakeFiles/plmdose.dir/rt_parms.cxx.o.d -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_parms.cxx +[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -MF CMakeFiles/plmregister.dir/bspline_state.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_state.cxx +[ 60%] Building CXX object src/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -MF CMakeFiles/plmdose.dir/plan_calc.cxx.o.d -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/plan_calc.cxx +[ 61%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize.cxx +[ 61%] Building CXX object src/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o -MF CMakeFiles/plmdose.dir/rt_sigma.cxx.o.d -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_sigma.cxx +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_dij.cxx: In member function 'void Rt_dij::dump(const std::string&) const': +/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_dij.cxx:51:28: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=] + 51 | fprintf (fp, "%d %f\n", c->index, c->dose); + | ~^ ~~~~~~~~ + | | | + | int long unsigned int + | %ld +[ 62%] Building CXX object src/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -MF CMakeFiles/plmdose.dir/wed_parms.cxx.o.d -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/wed_parms.cxx +[ 62%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_analytic.cxx +[ 62%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_numeric.cxx +[ 62%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_semi_analytic.cxx +[ 63%] Building CXX object src/register/CMakeFiles/plmregister.dir/demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/demons.cxx.o -MF CMakeFiles/plmregister.dir/demons.cxx.o.d -o CMakeFiles/plmregister.dir/demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/demons.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/wed_parms.cxx: In member function 'int Wed_parms::set_key_val(const char*, const char*, int)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/wed_parms.cxx:237:32: warning: format '%i' expects argument of type 'int*', but argument 3 has type 'plm_long*' {aka 'long int*'} [-Wformat=] 237 | if (sscanf (val, "%i %i", @@ -5045,16 +5136,10 @@ | ~~~~~~~~~~~~~~~~ | | | plm_long* {aka long int*} -[ 57%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/drr_trilin.cxx -[ 58%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mi.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_mi.cxx -[ 58%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mse.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_mse.cxx -[ 58%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize.cxx -[ 58%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_lbfgsb.cxx +[ 63%] Building CXX object src/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o -MF CMakeFiles/plmregister.dir/demons_cpu.cxx.o.d -o CMakeFiles/plmregister.dir/demons_cpu.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/demons_cpu.cxx +[ 63%] Building CXX object src/register/CMakeFiles/plmregister.dir/demons_state.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/demons_state.cxx.o -MF CMakeFiles/plmregister.dir/demons_state.cxx.o.d -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/demons_state.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_mebs.cxx: In member function 'void Rt_mebs::load_beamlet_map(Aperture::Pointer&)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_mebs.cxx:1129:52: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 1129 | printf("beamlet line number expected: %d, beamlet line detected: %d.\n", ap->get_dim(1), line_number); @@ -5094,23 +5179,26 @@ | | | | int plm_long {aka long int} | %ld -[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_liblbfgs.cxx -[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_nlopt.cxx -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_dij.cxx: In member function 'void Rt_dij::dump(const std::string&) const': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/rt_dij.cxx:51:28: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=] - 51 | fprintf (fp, "%d %f\n", c->index, c->dose); - | ~^ ~~~~~~~~ - | | | - | int long unsigned int - | %ld -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_calc.cxx: In member function 'bool Beam_calc::load(const char*)': -/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/beam_calc.cxx:194:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 194 | fgets (linebuf, 128, fp); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -[ 59%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/fdk.cxx +[ 63%] Building CXX object src/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -MF CMakeFiles/plmregister.dir/gpuit_demons.cxx.o.d -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/gpuit_demons.cxx +[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -MF CMakeFiles/plmregister.dir/groupwise_parms.cxx.o.d -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/groupwise_parms.cxx +[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/histogram.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/histogram.cxx.o -MF CMakeFiles/plmregister.dir/histogram.cxx.o.d -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/histogram.cxx +[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -MF CMakeFiles/plmregister.dir/itk_align_center.cxx.o.d -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_align_center.cxx +[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_demons.cxx +[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o +[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons_util.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_demons_util.cxx +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_diff_demons.cxx +[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_fsf_demons.cxx +[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_log_demons.cxx +[ 66%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_sym_log_demons.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/plan_calc.cxx: In member function 'void Plan_calc::normalize_beam_dose(Beam_calc*)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose/plan_calc.cxx:424:48: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 424 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); @@ -5161,64 +5249,6 @@ | | | | int long int | %ld -[ 59%] Building CXX object src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct/fdk_util.cxx -[ 59%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_optimize_steepest.cxx -[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -MF CMakeFiles/plmregister.dir/bspline_parms.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_parms.cxx -[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -MF CMakeFiles/plmregister.dir/bspline_score.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_score.cxx -[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -MF CMakeFiles/plmregister.dir/bspline_stage.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_stage.cxx -[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -MF CMakeFiles/plmregister.dir/bspline_state.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_state.cxx -[ 60%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_analytic.cxx -[ 61%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize.cxx -[ 61%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_numeric.cxx -[ 61%] Building CXX object src/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/bspline_regularize_semi_analytic.cxx -[ 62%] Building CXX object src/register/CMakeFiles/plmregister.dir/demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/demons.cxx.o -MF CMakeFiles/plmregister.dir/demons.cxx.o.d -o CMakeFiles/plmregister.dir/demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/demons.cxx -[ 62%] Building CXX object src/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard 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/usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ldl /usr/lib/x[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -MF CMakeFiles/plmregister.dir/groupwise_parms.cxx.o.d -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/groupwise_parms.cxx -[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/histogram.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/histogram.cxx.o -MF CMakeFiles/plmregister.dir/histogram.cxx.o.d -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/histogram.cxx -[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -MF CMakeFiles/plmregister.dir/itk_align_center.cxx.o.d -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_align_center.cxx -[ 64%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_demons.cxx -[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons_util.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_demons_util.cxx -[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_diff_demons.cxx -[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_fsf_demons.cxx -[ 65%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_log_demons.cxx -86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../libdevillard.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../libplmreconstruct.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmreconstruct.so -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 65%] Built target plmreconstruct -[ 66%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_sym_log_demons.cxx -ux-gnu/libvtksys-9.3.so.9.3 ../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt ../../libplmsys.so.1.10 -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../libdevillard.a -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/dose && /usr/bin/cmake -E cmake_symlink_library ../../libplmdose.so.1.10 ../../libplmdose.so.1.10 ../../libplmdose.so -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 66%] Built target plmdose [ 66%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -MF CMakeFiles/plmregister.dir/itk_optimizer.cxx.o.d -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_optimizer.cxx [ 66%] Building CXX object src/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o @@ -5229,29 +5259,12 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o -MF CMakeFiles/plmregister.dir/itk_tps.cxx.o.d -o CMakeFiles/plmregister.dir/itk_tps.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_tps.cxx [ 67%] Building CXX object src/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o -MF CMakeFiles/plmregister.dir/joint_histogram.cxx.o.d -o CMakeFiles/plmregister.dir/joint_histogram.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/joint_histogram.cxx -[ 67%] Building CXX object src/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o -MF CMakeFiles/plmregister.dir/landmark_warp.cxx.o.d -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/landmark_warp.cxx -[ 68%] Building CXX object src/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o -MF CMakeFiles/plmregister.dir/metric_parms.cxx.o.d -o CMakeFiles/plmregister.dir/metric_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/metric_parms.cxx -[ 68%] Building CXX object src/register/CMakeFiles/plmregister.dir/metric_state.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/metric_state.cxx.o -MF CMakeFiles/plmregister.dir/metric_state.cxx.o.d -o CMakeFiles/plmregister.dir/metric_state.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/metric_state.cxx -[ 68%] Building CXX object src/register/CMakeFiles/plmregister.dir/process_parms.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/process_parms.cxx.o -MF CMakeFiles/plmregister.dir/process_parms.cxx.o.d -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/process_parms.cxx -[ 68%] Building CXX object src/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -MF CMakeFiles/plmregister.dir/rbf_cluster.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/rbf_cluster.cxx -[ 69%] Building CXX object src/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -MF CMakeFiles/plmregister.dir/rbf_gauss.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/rbf_gauss.cxx -[ 69%] Building CXX object src/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -MF CMakeFiles/plmregister.dir/rbf_wendland.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/rbf_wendland.cxx -[ 69%] Building CXX object src/register/CMakeFiles/plmregister.dir/registration.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG 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-I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/register/CMakeFiles/plmregister.dir/registration_data.cxx.o -MF CMakeFiles/plmregister.dir/registration_data.cxx.o.d -o 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/usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linIn file included from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, + from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:22, + from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_diff_demons.h:7, + from /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register/itk_diff_demons.cxx:5: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of 'itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction::SetNumberOfThreads(unsigned int)': @@ -5500,6 +5532,10 @@ /usr/include/ITK-5.4/itkMultiThreaderBase.h:221:3: note: declared here 221 | itkLegacyMacro(virtual void SetNumberOfThreads(ThreadIdType numberOfThreads)) | ^~~~~~~~~~~~~~ +[ 76%] Building CXX object src/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o -MF CMakeFiles/plmsegment.dir/ml_convert.cxx.o.d -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment/ml_convert.cxx +[ 76%] Building CXX object src/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o -MF CMakeFiles/plmsegment.dir/segment_body.cxx.o.d -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment/segment_body.cxx [ 77%] Linking CXX shared library ../../libplmsegment.so cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/segment && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsegment.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmsegment.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmsegment.so.1.10 -o ../../libplmsegment.so.1.10 CMakeFiles/plmsegment.dir/autolabel.cxx.o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o 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/usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread ../../liblbfgs.a -Wl,-Bdynamic @@ -5512,245 +5548,245 @@ make -f src/standalone/CMakeFiles/landmark_diff.dir/build.make src/standalone/CMakeFiles/landmark_diff.dir/depend make -f src/standalone/CMakeFiles/merge_vfs.dir/build.make src/standalone/CMakeFiles/merge_vfs.dir/depend make -f src/standalone/CMakeFiles/shuffle_mha.dir/build.make src/standalone/CMakeFiles/shuffle_mha.dir/depend -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake "--color=" make -f src/standalone/CMakeFiles/wed.dir/build.make src/standalone/CMakeFiles/wed.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake "--color=" make -f src/standalone/CMakeFiles/xvi_archive.dir/build.make src/standalone/CMakeFiles/xvi_archive.dir/depend -make -f src/standalone/CMakeFiles/check_grad.dir/build.make src/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/demons.dir/build.make src/standalone/CMakeFiles/demons.dir/depend cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/wed.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake "--color=" -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake "--color=" +make -f src/standalone/CMakeFiles/check_grad.dir/build.make src/standalone/CMakeFiles/check_grad.dir/depend +make -f src/standalone/CMakeFiles/demons.dir/build.make src/standalone/CMakeFiles/demons.dir/depend make -f src/standalone/CMakeFiles/dlib_train.dir/build.make src/standalone/CMakeFiles/dlib_train.dir/depend make -f src/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake "--color=" -make -f src/standalone/CMakeFiles/bragg_curve.dir/build.make src/standalone/CMakeFiles/bragg_curve.dir/depend -make -f src/standalone/CMakeFiles/sobp.dir/build.make src/standalone/CMakeFiles/sobp.dir/depend -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/demons.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/dicom_info.dir/build.make src/standalone/CMakeFiles/dicom_info.dir/build -make -f src/standalone/CMakeFiles/dicom_uid.dir/build.make src/standalone/CMakeFiles/dicom_uid.dir/depend +make -f src/standalone/CMakeFiles/merge_vfs.dir/build.make src/standalone/CMakeFiles/merge_vfs.dir/build +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/shuffle_mha.dir/build.make src/standalone/CMakeFiles/shuffle_mha.dir/build +make -f src/standalone/CMakeFiles/wed.dir/build.make src/standalone/CMakeFiles/wed.dir/build +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/landmark_diff.dir/build.make src/standalone/CMakeFiles/landmark_diff.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/compute_distance.dir/build.make src/standalone/CMakeFiles/compute_distance.dir/build -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/shuffle_mha.dir/build.make src/standalone/CMakeFiles/shuffle_mha.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/compute_distance.dir/build.make src/standalone/CMakeFiles/compute_distance.dir/build +make -f src/standalone/CMakeFiles/dicom_info.dir/build.make src/standalone/CMakeFiles/dicom_info.dir/build +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/demons.dir/DependInfo.cmake "--color=" +make -f src/standalone/CMakeFiles/landmark_diff.dir/build.make src/standalone/CMakeFiles/landmark_diff.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 77%] Building CXX object src/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o -MF CMakeFiles/dicom_info.dir/dicom_info.cxx.o.d -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/dicom_info.cxx -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/merge_vfs.dir/build.make src/standalone/CMakeFiles/merge_vfs.dir/build -[ 77%] Building CXX object src/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -MF CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o.d -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/landmark_diff_main.cxx -make -f src/standalone/CMakeFiles/wed.dir/build.make src/standalone/CMakeFiles/wed.dir/build -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/dlib_train.dir/build.make src/standalone/CMakeFiles/dlib_train.dir/build -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Building CXX object src/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/standalone/CMakeFiles/hnd_to_pfm.dir/build cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -MF CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o.d -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/shuffle_mha_main.cxx -make -f src/cli/CMakeFiles/plastimatch.dir/build.make src/cli/CMakeFiles/plastimatch.dir/build -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make -f src/standalone/CMakeFiles/xvi_archive.dir/build.make src/standalone/CMakeFiles/xvi_archive.dir/build -make -f src/standalone/CMakeFiles/demons.dir/build.make src/standalone/CMakeFiles/demons.dir/build -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 77%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/sobp.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o -MF CMakeFiles/compute_distance.dir/compute_distance.cxx.o.d -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/compute_distance.cxx +[ 77%] Building CXX object src/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 77%] Building CXX object src/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o -MF CMakeFiles/dicom_info.dir/dicom_info.cxx.o.d -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/dicom_info.cxx +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -MF CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o.d -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/merge_vector_fields.cxx +make -f src/cli/CMakeFiles/plastimatch.dir/build.make src/cli/CMakeFiles/plastimatch.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake "--color=" -[ 77%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 77%] Building CXX object src/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o make -f src/standalone/CMakeFiles/check_grad.dir/build.make src/standalone/CMakeFiles/check_grad.dir/build -[ 77%] Building CXX object src/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -MF CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o.d -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/landmark_diff_main.cxx make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 77%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -[ 78%] Building CXX object src/standalone/CMakeFiles/wed.dir/wed_main.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o -MF CMakeFiles/compute_distance.dir/compute_distance.cxx.o.d -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/compute_distance.cxx -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -MF CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o.d -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/merge_vector_fields.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -MF CMakeFiles/compute_distance.dir/closest_point.cxx.o.d -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/closest_point.cxx -make -f src/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/standalone/CMakeFiles/hnd_to_pfm.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/dlib_train.dir/build.make src/standalone/CMakeFiles/dlib_train.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/bragg_curve.dir/build.make src/standalone/CMakeFiles/bragg_curve.dir/build -[ 79%] Building CXX object src/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o +[ 78%] Building CXX object src/standalone/CMakeFiles/wed.dir/wed_main.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/wed.dir/wed_main.cxx.o -MF CMakeFiles/wed.dir/wed_main.cxx.o.d -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/wed_main.cxx -[ 79%] Building CXX object src/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o -make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 78%] Building CXX object src/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -MF CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o.d -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/hnd_to_pfm.cxx make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -make -f src/standalone/CMakeFiles/sobp.dir/build.make src/standalone/CMakeFiles/sobp.dir/build -[ 79%] Building CXX object src/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -[ 79%] Building CXX object src/standalone/CMakeFiles/demons.dir/demons_main.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o -MF CMakeFiles/check_grad.dir/check_grad.cxx.o.d -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/check_grad.cxx -[ 79%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o +make -f src/standalone/CMakeFiles/demons.dir/build.make src/standalone/CMakeFiles/demons.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 78%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_add.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_add.cxx +[ 79%] Building CXX object src/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o -MF CMakeFiles/check_grad.dir/check_grad.cxx.o.d -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/check_grad.cxx +[ 79%] Building CXX object src/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -MF CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o.d -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/xvi_archive.cxx +[ 79%] Building CXX object src/standalone/CMakeFiles/demons.dir/demons_main.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/demons.dir/demons_main.cxx.o -MF CMakeFiles/demons.dir/demons_main.cxx.o.d -o CMakeFiles/demons.dir/demons_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/demons_main.cxx -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 79%] Building CXX object src/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o -MF CMakeFiles/dlib_train.dir/dlib_train.cxx.o.d -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/dlib_train.cxx -make -f src/standalone/CMakeFiles/dicom_uid.dir/build.make src/standalone/CMakeFiles/dicom_uid.dir/build +[ 80%] Linking CXX executable ../../landmark_diff +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/landmark_diff.dir/link.d CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../landmark_diff -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/l[ 80%] Linking CXX executable ../../hnd_to_pfm +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/hnd_to_pfm.dir/link.d CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../hnd_to_pfm -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 80%] Built target landmark_diff +[ 80%] Building CXX object src/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o -MF CMakeFiles/demons.dir/demons_opts.cxx.o.d -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/demons_opts.cxx +[ 80%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -MF CMakeFiles/compute_distance.dir/closest_point.cxx.o.d -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/closest_point.cxx +nu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 80%] Built target hnd_to_pfm +make -f src/standalone/CMakeFiles/bragg_curve.dir/build.make src/standalone/CMakeFiles/bragg_curve.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -MF CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o.d -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/xvi_archive.cxx -[ 79%] Building CXX object src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -[ 79%] Building CXX object src/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -[ 80%] Building CXX object src/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/bragg_curve.dir/build.make src/standalone/CMakeFiles/bragg_curve.dir/build +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 80%] Building CXX object src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/bragg_curve_main.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o -MF CMakeFiles/sobp.dir/sobp_main.cxx.o.d -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/sobp_main.cxx -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -MF CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o.d -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/hnd_to_pfm.cxx -[ 80%] Building CXX object src/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -MF CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o.d -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/dicom_uid_main.cxx -[ 81%] Linking CXX executable ../../landmark_diff -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/landmark_diff.dir/link.d CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../landmark_diff -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/l[ 81%] Building CXX object src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o +[ 81%] Linking CXX executable ../../demons +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/demons.dir/link.d CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../demons -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.[ 81%] Building CXX object src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/bragg_curve_opts.cxx -[ 81%] Linking CXX executable ../../hnd_to_pfm -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/hnd_to_pfm.dir/link.d CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../hnd_to_pfm -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-g[ 81%] Linking CXX executable ../../bragg_curve +[ 81%] Linking CXX executable ../../bragg_curve cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/bragg_curve.dir/link.d CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../bragg_curve -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 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/usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/bragg_curve.dir/link.d CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../bragg_curve -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat 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/usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 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/usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-l9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 81%] Built target landmark_diff -[ 81%] Building CXX object src/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o -MF CMakeFiles/demons.dir/demons_opts.cxx.o.d -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/demons_opts.cxx -[ 82%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -MF CMakeFiles/compute_distance.dir/read_obj.cxx.o.d -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/read_obj.cxx inux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 82%] Built target bragg_curve -[ 83%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o +[ 81%] Built target bragg_curve +[ 81%] Built target demons +[ 82%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o +[ 83%] Building CXX object src/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -MF CMakeFiles/compute_distance.dir/read_obj.cxx.o.d -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/read_obj.cxx cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_adjust.cxx -nu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +[ 83%] Linking CXX executable ../../wed +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/wed.dir/link.d CMakeFiles/wed.dir/wed_main.cxx.o -o ../../wed -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9make -f src/standalone/CMakeFiles/sobp.dir/build.make src/standalone/CMakeFiles/sobp.dir/depend +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/sobp.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/sobp.dir/build.make src/standalone/CMakeFiles/sobp.dir/build +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 84%] Building CXX object src/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o -MF CMakeFiles/sobp.dir/sobp_main.cxx.o.d -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/sobp_main.cxx +make -f src/standalone/CMakeFiles/dicom_uid.dir/build.make src/standalone/CMakeFiles/dicom_uid.dir/depend +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.10.0+dfsg.1 /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +make -f src/standalone/CMakeFiles/dicom_uid.dir/build.make src/standalone/CMakeFiles/dicom_uid.dir/build +make[3]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 84%] Building CXX object src/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -MF CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o.d -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/standalone/dicom_uid_main.cxx + /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Built target hnd_to_pfm -[ 83%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o +[ 84%] Linking CXX executable ../../shuffle_mha +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/shuffle_mha.dir/link.d CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../shuffle_mha -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_6[ 84%] Built target wed +[ 84%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_autolabel_train.cxx -[ 84%] Linking CXX executable ../../demons -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/demons.dir/link.d CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../demons -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.[ 84%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o +[ 84%] Linking CXX executable ../../compute_distance +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/compute_distance.dir/link.d CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../compute_distance -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /us4-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 84%] Built target shuffle_mha +[ 84%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_autolabel.cxx [ 84%] Linking CXX executable ../../dicom_uid cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_uid.dir/link.d CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../dicom_uid -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-[ 84%] Linking CXX executable ../../sobp -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/sobp.dir/link.d CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../sobp -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.39 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_uid.dir/link.d CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../dicom_uid -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-r/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 84%] Built target demons +[ 84%] Linking CXX executable ../../check_grad +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/check_grad.dir/link.d CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../check_grad -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-g[ 84%] Built target compute_distance [ 84%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_bbox.cxx -.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +[ 84%] Linking CXX executable ../../sobp +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/sobp.dir/link.d CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../sobp -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 84%] Built target sobp +[ 84%] Built target dicom_uid [ 85%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_benchmark.cxx +.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 85%] Built target sobp [ 85%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_boundary.cxx -[ 85%] Built target dicom_uid +nu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 85%] Built target check_grad [ 85%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_compare.cxx -[ 85%] Linking CXX executable ../../compute_distance -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/compute_distance.dir/link.d CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../compute_distance -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /us[ 85%] Linking CXX executable ../../wed -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/wed.dir/link.d CMakeFiles/wed.dir/wed_main.cxx.o -o ../../wed -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9[ 85%] Linking CXX executable ../../shuffle_mha -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/shuffle_mha.dir/link.d CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../shuffle_mha -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_6 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 85%] Built target wed [ 85%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_compose.cxx -r/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 85%] Built target compute_distance -[ 86%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o +[ 86%] Linking CXX executable ../../dicom_info +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_info.dir/link.d CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../dicom_info -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-g[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_crop.cxx -4-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 86%] Built target shuffle_mha -[ 86%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o +[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_dice.cxx -[ 86%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o +[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_diff.cxx -[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_dmap.cxx -[ 87%] Linking CXX executable ../../check_grad -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/check_grad.dir/link.d CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../check_grad -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +nu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 87%] Built target check_grad -[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o +[ 88%] Linking CXX executable ../../xvi_archive +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 +[ 88%] Built target dicom_info +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/xvi_archive.dir/link.d CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../xvi_archive -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a 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/usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /us[ 89%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_dmap.cxx +[ 90%] Linking CXX executable ../../merge_vfs +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/merge_vfs.dir/link.d CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../merge_vfs -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 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/usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-l[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_dose.cxx -[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o +r/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 90%] Built target xvi_archive +[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_drr.cxx -[ 87%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o +inux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 90%] Built target merge_vfs +[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_dvh.cxx -[ 88%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o +[ 91%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_fdk.cxx -[ 88%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o +[ 91%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_filter.cxx -[ 88%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o +[ 91%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_gamma.cxx -[ 88%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o +[ 91%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_header.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_header.cxx -[ 89%] Linking CXX executable ../../dicom_info -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_info.dir/link.d CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../dicom_info -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-g[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o +[ 92%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_intersect.cxx -nu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 90%] Built target dicom_info -[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o +[ 92%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_jacobian.cxx -[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o +[ 92%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_lm_warp.cxx -[ 90%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o +[ 92%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_mabs.cxx -[ 91%] Linking CXX executable ../../merge_vfs -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/merge_vfs.dir/link.d CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../merge_vfs -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-l[ 92%] Linking CXX executable ../../xvi_archive -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/xvi_archive.dir/link.d CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../xvi_archive -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../libinih.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 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src/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o +[ 93%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_mask.cxx [ 93%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_maximum.cxx -inux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 93%] Built target merge_vfs [ 93%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_ml_convert.cxx -r/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 -make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' -[ 93%] Built target xvi_archive [ 93%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_multiply.cxx [ 94%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o @@ -5771,21 +5807,26 @@ cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_synth.cxx [ 96%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_synth_vf.cxx -[ 96%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_thumbnail.cxx [ 96%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_threshold.cxx -[ 97%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o +[ 97%] Linking CXX executable ../../dlib_train +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dlib_train.dir/link.d CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../dlib_train -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.4.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.4.so.1 ../../libdevillard.a ../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../libspecfun.a ../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.4.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.4.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.4.so.1 -lfftw3_threads -lfftw3 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/usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 +make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' +[ 97%] Built target dlib_train +[ 97%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o +cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_thumbnail.cxx +[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_union.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_union.cxx -[ 97%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o +[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_warp.cxx -[ 97%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o +[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_warp_dij.cxx -[ 97%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o +[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_warp_pointset.cxx -[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o +[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_wed.cxx -[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o +[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_xio_dvh.cxx /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_xio_dvh.cxx: In function 'void do_command_xio_dvh(int, char**)': /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_xio_dvh.cxx:46:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -5829,19 +5870,14 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -[ 98%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o +[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_xf_convert.cxx +[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/pcmd_xf_invert.cxx -[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o +[100%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/plastimatch_main.cxx -[ 99%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o +[100%] Building CXX object src/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/sys -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/base -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/util -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/libs/devillard -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/register -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/segment -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/dose -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/reconstruct -I/build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/clp -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.4 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -c /build/reproducible-path/plastimatch-1.10.0+dfsg.1/src/cli/plastimatch_startup.cxx -[100%] Linking CXX executable ../../dlib_train -cd /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/src/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.10.0+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -msse2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dlib_train.dir/link.d CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../dlib_train -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../libplmclp.a ../../libplmsegment.so.1.10 ../../libplmregister.so.1.10 ../../libplmreconstruct.so.1.10 ../../libplmdose.so.1.10 ../../libplmutil.so.1.10 ../../libplmbase.so.1.10 ../../libplmsys.so.1.10 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.4.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.4.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.4.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so 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/usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.4.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.4.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.15 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic /usr/lib/x86_64-linux-gnu/libdcmimage.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libdcmdata.so.19.3.6.9 -lz /usr/lib/x86_64-linux-gnu/liboflog.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libofstd.so.19.3.6.9 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.19.3.6.9 -lpthread -lrt -ltiff -ljpeg -lpng /usr/lib/x86_64-linux-gnu/libijg8.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg12.so.19.3.6.9 /usr/lib/x86_64-linux-gnu/libijg16.so.19.3.6.9 @@ -5853,10 +5889,10 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1' dh_auto_test - cd obj-x86_64-linux-gnu && make -j16 test ARGS\+=--verbose ARGS\+=-j16 + cd obj-x86_64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12 make[2]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j16 +/usr/bin/ctest --force-new-ctest-process --verbose -j12 UpdateCTestConfiguration from :/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Add coverage exclude regular expressions. @@ -6034,30 +6070,6 @@ 9: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gabor-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--pattern;gabor;--origin;-5 -5 -5;--dim;11 11 11;--spacing;1 1 1;--gabor-k-fib;0 1;--gauss-center;0 0 0;--gauss-std;3 3 3;--background;0;--foreground;1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 9: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 9: Test timeout computed to be: 1500 -test 13 - Start 13: gauss-4 - -13: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output-type;float;--pattern;gauss;--origin;+25 +25 -25;--dim;38 38 38;--spacing;-1.31579 -1.31579 2;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -13: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -13: Test timeout computed to be: 1500 -test 15 - Start 15: gauss-6 - -15: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -15: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -15: Test timeout computed to be: 1500 -test 17 - Start 17: gauss-double-1 - -17: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -17: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -17: Test timeout computed to be: 1500 -test 18 - Start 18: gauss-double-2 - -18: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -18: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -18: Test timeout computed to be: 1500 10: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 10: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10 10: EXPECTED_ERRNO is @@ -6094,260 +6106,311 @@ 9: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 9: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--pattern;gabor;--origin;-5 -5 -5;--dim;11 11 11;--spacing;1 1 1;--gabor-k-fib;0 1;--gauss-center;0 0 0;--gauss-std;3 3 3;--background;0;--foreground;1 9: EXPECTED_ERRNO is +10: RETVAL: 0 +12: RETVAL: 0 +12: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha +12: +12: STDERR: +10: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +11: RETVAL: 0 +11: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +11: +11: STDERR: +10: +10: STDERR: +12: Not an error +1: RETVAL: 0 +1: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha +1: +1: STDERR: +11: Not an error +10: Not an error +1: Not an error + 1/578 Test #12: gauss-3 ............................... Passed 0.10 sec +test 13 + Start 13: gauss-4 + +13: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output-type;float;--pattern;gauss;--origin;+25 +25 -25;--dim;38 38 38;--spacing;-1.31579 -1.31579 2;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +13: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +13: Test timeout computed to be: 1500 + 2/578 Test #10: gauss-1 ............................... Passed 0.11 sec + 3/578 Test #1: black-1 ............................... Passed 0.10 sec +test 15 + Start 15: gauss-6 + +15: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +15: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +15: Test timeout computed to be: 1500 +test 17 + Start 17: gauss-double-1 + +17: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +17: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +17: Test timeout computed to be: 1500 + 4/578 Test #11: gauss-2 ............................... Passed 0.11 sec +test 18 + Start 18: gauss-double-2 + +18: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +18: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +18: Test timeout computed to be: 1500 13: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 13: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output-type;float;--pattern;gauss;--origin;+25 +25 -25;--dim;38 38 38;--spacing;-1.31579 -1.31579 2;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10 13: EXPECTED_ERRNO is -15: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -15: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10 -15: EXPECTED_ERRNO is -18: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -18: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 -18: EXPECTED_ERRNO is 17: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 17: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10 17: EXPECTED_ERRNO is -14: RETVAL: 0 -14: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha -14: -14: STDERR: -14: Not an error - 1/578 Test #14: gauss-5 ............................... Passed 0.57 sec -13: RETVAL: 0 -13: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha -13: -13: STDERR: +2: RETVAL: 0 +2: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd +2: +2: STDERR: +3: RETVAL: 0 +3: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd +3: +3: STDERR: +2: Not an error +3: Not an error + 5/578 Test #3: cyl-mask-2 ............................ Passed 0.11 sec +15: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +15: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10 +15: EXPECTED_ERRNO is test 19 Start 19: gauss-ushort-1 19: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-ushort-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 19: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 19: Test timeout computed to be: 1500 -13: Not an error -9: RETVAL: 0 -9: STDOUT: Gabor: 0 1 -> (0.000000 -1.570796) -> (-0.000000 -0.000000 -1.000000) -9: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha -9: -9: STDERR: -9: Not an error -10: RETVAL: 0 -10: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -10: -10: STDERR: -10: Not an error -8: RETVAL: 0 -8: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha -8: -8: STDERR: -8: Not an error -2: RETVAL: 0 -2: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd -2: -2: STDERR: -2: Not an error -5: RETVAL: 0 -5: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd -5: -5: STDERR: -5: Not an error - 2/578 Test #10: gauss-1 ............................... Passed 0.59 sec - 3/578 Test #8: donut-2 ............................... Passed 0.55 sec -1: RETVAL: 0 -1: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha -1: -1: STDERR: + 6/578 Test #2: cyl-1 ................................. Passed 0.12 sec test 20 Start 20: gauss-ushort-2 20: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-ushort-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 20: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 20: Test timeout computed to be: 1500 +5: RETVAL: 0 +5: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd +5: +5: STDERR: +5: Not an error + 7/578 Test #5: cyl-mask-3 ............................ Passed 0.12 sec +18: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +18: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 +18: EXPECTED_ERRNO is test 21 Start 21: lung-1 21: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=lung-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom;--pattern;lung;--lung-tumor-pos;0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 21: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 21: Test timeout computed to be: 1500 -12: RETVAL: 0 -12: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha -12: -12: STDERR: -12: Not an error -3: RETVAL: 0 -3: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd -3: -3: STDERR: -3: Not an error -17: RETVAL: 0 -17: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha -17: -17: STDERR: -17: Not an error - 4/578 Test #13: gauss-4 ............................... Passed 0.54 sec -1: Not an error - 5/578 Test #1: black-1 ............................... Passed 0.58 sec +14: RETVAL: 0 +14: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha +14: +14: STDERR: +20: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +20: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 +20: EXPECTED_ERRNO is +19: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +19: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10 +19: EXPECTED_ERRNO is +14: Not an error +8: RETVAL: 0 +8: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha +8: +8: STDERR: + 8/578 Test #14: gauss-5 ............................... Passed 0.15 sec +8: Not an error test 27 Start 27: ptv-1 27: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=ptv-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha;--pattern;rect;--dim;60 60 60;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 27: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 27: Test timeout computed to be: 1500 - 6/578 Test #12: gauss-3 ............................... Passed 0.60 sec - 7/578 Test #3: cyl-mask-2 ............................ Passed 0.58 sec - 8/578 Test #17: gauss-double-1 ........................ Passed 0.54 sec - 9/578 Test #2: cyl-1 ................................. Passed 0.58 sec - 10/578 Test #5: cyl-mask-3 ............................ Passed 0.58 sec - 11/578 Test #9: gabor-01 .............................. Passed 0.56 sec -18: RETVAL: 0 -18: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha -18: -18: STDERR: -18: Not an error - 12/578 Test #18: gauss-double-2 ........................ Passed 0.54 sec -15: RETVAL: 0 -15: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha -15: -15: STDERR: -15: Not an error - 13/578 Test #15: gauss-6 ............................... Passed 0.54 sec -11: RETVAL: 0 -11: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -11: -11: STDERR: -11: Not an error +21: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +21: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom;--pattern;lung;--lung-tumor-pos;0 +21: EXPECTED_ERRNO is + 9/578 Test #8: donut-2 ............................... Passed 0.13 sec test 28 Start 28: ptv-2 28: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=ptv-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha;--pattern;rect;--dim;40 40 40;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-100 -100 -100;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 28: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 28: Test timeout computed to be: 1500 +29: RETVAL: 0 +29: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha +29: Converting from ITK_UCHAR to ITK_UCHAR_VEC +29: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha +29: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha +29: save_ss_img: save_ss_list +29: Done. +29: Doing extraction +29: Keyholizing structure 0. +29: Write: DoseGridScaling = 0.000000 +29: +29: STDERR: +29: Not an error + 10/578 Test #29: rect-1 ................................ Passed 0.16 sec +7: RETVAL: 0 +7: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha +7: Converting from ITK_UCHAR to ITK_UCHAR_VEC +7: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha +7: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-prefix//Foreground.mha +7: save_ss_img: save_ss_list +7: Done. +7: Doing extraction +7: Keyholizing structure 0. +7: Write: DoseGridScaling = 0.000000 +7: +7: STDERR: test 30 Start 30: rect-2 30: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-2;--filenames-without-uids" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 30: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 30: Test timeout computed to be: 1500 +7: Not an error +28: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +28: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha;--pattern;rect;--dim;40 40 40;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-100 -100 -100;--spacing;5 5 5 +28: EXPECTED_ERRNO is + 11/578 Test #7: donut-1 ............................... Passed 0.16 sec test 31 Start 31: rect-2s 31: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-2s" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--spacing;13.158 13.158 13.158;--rect-size; 200 200 200;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 31: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 31: Test timeout computed to be: 1500 +27: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +27: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha;--pattern;rect;--dim;60 60 60;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;5 5 5 +27: EXPECTED_ERRNO is +9: RETVAL: 0 +9: STDOUT: Gabor: 0 1 -> (0.000000 -1.570796) -> (-0.000000 -0.000000 -1.000000) +9: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha +9: +9: STDERR: +9: Not an error + 12/578 Test #9: gabor-01 .............................. Passed 0.15 sec test 32 Start 32: rect-3 32: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-3;--filenames-without-uids" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 32: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 32: Test timeout computed to be: 1500 +32: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +32: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-3;--filenames-without-uids +32: EXPECTED_ERRNO is +30: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +30: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-2;--filenames-without-uids +30: EXPECTED_ERRNO is +31: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +31: PARMS is synth;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--spacing;13.158 13.158 13.158;--rect-size; 200 200 200;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha +31: EXPECTED_ERRNO is +13: RETVAL: 0 +13: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha +13: +13: STDERR: +13: Not an error + 13/578 Test #13: gauss-4 ............................... Passed 0.12 sec test 33 Start 33: rect-4 33: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 33: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 33: Test timeout computed to be: 1500 +20: RETVAL: 0 +20: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha +20: +20: STDERR: +20: Not an error +18: RETVAL: 0 +18: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha +18: +18: STDERR: +18: Not an error + 14/578 Test #20: gauss-ushort-2 ........................ Passed 0.10 sec test 34 Start 34: rect-5 34: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-5" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;-300 -150 -250;--direction-cosines;rotated-1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 34: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 34: Test timeout computed to be: 1500 + 15/578 Test #18: gauss-double-2 ........................ Passed 0.12 sec test 40 Start 40: rect-10-roi-1 40: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10-roi-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-60 60 -60 60 -60 60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 40: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 40: Test timeout computed to be: 1500 +33: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +33: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50 +33: EXPECTED_ERRNO is +17: RETVAL: 0 +17: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha +17: +17: STDERR: +34: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +34: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;-300 -150 -250;--direction-cosines;rotated-1 +34: EXPECTED_ERRNO is +17: Not an error +15: RETVAL: 0 +15: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha +15: +15: STDERR: +40: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +40: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-60 60 -60 60 -60 60 +40: EXPECTED_ERRNO is + 16/578 Test #17: gauss-double-1 ........................ Passed 0.14 sec test 43 Start 43: rect-11-roi 43: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-11-roi" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 80 -50 80 -50 80" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 43: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 43: Test timeout computed to be: 1500 +15: Not an error + 17/578 Test #15: gauss-6 ............................... Passed 0.15 sec test 44 Start 44: rect-12 44: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-12" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 44: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 44: Test timeout computed to be: 1500 - 14/578 Test #11: gauss-2 ............................... Passed 0.66 sec +28: RETVAL: 0 +28: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha +28: +28: STDERR: +28: Not an error + 18/578 Test #28: ptv-2 ................................. Passed 0.11 sec +43: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +43: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 80 -50 80 -50 80 +43: EXPECTED_ERRNO is test 45 Start 45: rect-13 45: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-13" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;11;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 45: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 45: Test timeout computed to be: 1500 -19: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -19: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10 -19: EXPECTED_ERRNO is -21: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -21: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom;--pattern;lung;--lung-tumor-pos;0 -21: EXPECTED_ERRNO is -20: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -20: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 -20: EXPECTED_ERRNO is -27: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -27: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha;--pattern;rect;--dim;60 60 60;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;5 5 5 -27: EXPECTED_ERRNO is -28: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -28: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha;--pattern;rect;--dim;40 40 40;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-100 -100 -100;--spacing;5 5 5 -28: EXPECTED_ERRNO is -30: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -30: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-2;--filenames-without-uids -30: EXPECTED_ERRNO is -31: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -31: PARMS is synth;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--spacing;13.158 13.158 13.158;--rect-size; 200 200 200;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha -31: EXPECTED_ERRNO is -32: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -32: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-3;--filenames-without-uids -32: EXPECTED_ERRNO is -33: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -33: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50 -33: EXPECTED_ERRNO is -34: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -34: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;-300 -150 -250;--direction-cosines;rotated-1 -34: EXPECTED_ERRNO is -40: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -40: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-60 60 -60 60 -60 60 -40: EXPECTED_ERRNO is -7: RETVAL: 0 -7: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha -7: Converting from ITK_UCHAR to ITK_UCHAR_VEC -7: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha -7: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-prefix//Foreground.mha -7: save_ss_img: save_ss_list -7: Done. -7: Doing extraction -7: Keyholizing structure 0. -7: Write: DoseGridScaling = 0.000000 -7: -7: STDERR: -7: Not an error - 15/578 Test #7: donut-1 ............................... Passed 0.64 sec +19: RETVAL: 0 +19: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha +19: +19: STDERR: +19: Not an error +44: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +44: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 +44: EXPECTED_ERRNO is + 19/578 Test #19: gauss-ushort-1 ........................ Passed 0.16 sec test 46 Start 46: rect-14 46: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-14" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-2.5 6.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 46: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 46: Test timeout computed to be: 1500 -43: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -43: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 80 -50 80 -50 80 -43: EXPECTED_ERRNO is -29: RETVAL: 0 -29: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha -29: Converting from ITK_UCHAR to ITK_UCHAR_VEC -29: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha -29: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha -29: save_ss_img: save_ss_list -29: Done. -29: Doing extraction -29: Keyholizing structure 0. -29: Write: DoseGridScaling = 0.000000 -29: -29: STDERR: -29: Not an error -44: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -44: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 -44: EXPECTED_ERRNO is - 16/578 Test #29: rect-1 ................................ Passed 0.68 sec +45: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +45: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;11;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 +45: EXPECTED_ERRNO is +27: RETVAL: 0 +27: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha +27: +27: STDERR: +27: Not an error + 20/578 Test #27: ptv-1 ................................. Passed 0.15 sec test 47 Start 47: rect-15 @@ -6357,48 +6420,51 @@ 46: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 46: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-2.5 6.5 -4.5 4.5 -4.5 4.5 46: EXPECTED_ERRNO is -45: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -45: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;11;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 -45: EXPECTED_ERRNO is -47: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -47: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 -47: EXPECTED_ERRNO is -20: RETVAL: 0 -20: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha -20: -20: STDERR: -20: Not an error - 17/578 Test #20: gauss-ushort-2 ........................ Passed 0.22 sec +31: RETVAL: 0 +31: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha +31: +31: STDERR: +31: Not an error + 21/578 Test #31: rect-2s ............................... Passed 0.15 sec test 48 Start 48: rect-16 48: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-16" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 48: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 48: Test timeout computed to be: 1500 -28: RETVAL: 0 -28: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha -28: -28: STDERR: -28: Not an error -27: RETVAL: 0 -27: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha -27: -27: STDERR: -27: Not an error -40: RETVAL: 0 -40: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha -40: -40: STDERR: -40: Not an error - 18/578 Test #27: ptv-1 ................................. Passed 0.23 sec +47: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +47: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 +47: EXPECTED_ERRNO is +33: RETVAL: 0 +33: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha +33: +33: STDERR: +33: Not an error +32: RETVAL: 0 +32: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +32: Doing extraction +32: Keyholizing structure 0. +32: Write: DoseGridScaling = 0.000000 +32: +32: STDERR: +48: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +48: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 +48: EXPECTED_ERRNO is +34: RETVAL: 0 +34: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha +34: +34: STDERR: + 22/578 Test #33: rect-4 ................................ Passed 0.12 sec test 49 Start 49: rect-17 49: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-17" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha;--pattern;rect;--dim;60 60 60;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 49: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 49: Test timeout computed to be: 1500 - 19/578 Test #28: ptv-2 ................................. Passed 0.23 sec - 20/578 Test #40: rect-10-roi-1 ......................... Passed 0.20 sec +34: Not an error +32: Not an error + 23/578 Test #32: rect-3 ................................ Passed 0.17 sec + 24/578 Test #34: rect-5 ................................ Passed 0.11 sec test 57 Start 57: rectarr-03-a @@ -6411,86 +6477,81 @@ 62: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-type;uchar;--pattern;sphere;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;255;--center;0 0 0;--radius;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 62: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 62: Test timeout computed to be: 1500 -33: RETVAL: 0 -33: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha -33: -33: STDERR: -33: Not an error -48: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -48: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 -48: EXPECTED_ERRNO is - 21/578 Test #33: rect-4 ................................ Passed 0.22 sec +30: RETVAL: 0 +30: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +30: Doing extraction +30: Keyholizing structure 0. +30: Write: DoseGridScaling = 0.000000 +30: +30: STDERR: +30: Not an error +49: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +49: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha;--pattern;rect;--dim;60 60 60;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;5 5 5 +49: EXPECTED_ERRNO is + 25/578 Test #30: rect-2 ................................ Passed 0.19 sec test 63 Start 63: sphere-2 63: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 63: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 63: Test timeout computed to be: 1500 -19: RETVAL: 0 -19: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha -19: -19: STDERR: -19: Not an error -49: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -49: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha;--pattern;rect;--dim;60 60 60;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;5 5 5 -49: EXPECTED_ERRNO is 57: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 57: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;0;--foreground;70;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1 57: EXPECTED_ERRNO is - 22/578 Test #19: gauss-ushort-1 ........................ Passed 0.29 sec +40: RETVAL: 0 +40: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha +40: +40: STDERR: +40: Not an error + 26/578 Test #40: rect-10-roi-1 ......................... Passed 0.13 sec test 64 Start 64: sphere-3 64: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 64: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 64: Test timeout computed to be: 1500 -63: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -63: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;50 50 50 -63: EXPECTED_ERRNO is 62: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 62: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-type;uchar;--pattern;sphere;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;255;--center;0 0 0;--radius;10 10 10 62: EXPECTED_ERRNO is -64: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -64: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 -64: EXPECTED_ERRNO is -30: RETVAL: 0 -30: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -30: Doing extraction -30: Keyholizing structure 0. -30: Write: DoseGridScaling = 0.000000 -30: -30: STDERR: -30: Not an error +63: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +63: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;50 50 50 +63: EXPECTED_ERRNO is +45: RETVAL: 0 +45: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha +45: +45: STDERR: +45: Not an error 43: RETVAL: 0 43: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 43: 43: STDERR: +64: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +64: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 +64: EXPECTED_ERRNO is 43: Not an error - 23/578 Test #43: rect-11-roi ........................... Passed 0.27 sec + 27/578 Test #45: rect-13 ............................... Passed 0.12 sec test 66 Start 66: sphere-5 66: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-5" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha;--output-type;uchar;--pattern;sphere;--origin;-19 -19 -19;--dim;20 20 20;--spacing;2 2 2;--background;0;--foreground;1;--center;0 0 0;--radius;21" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 66: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 66: Test timeout computed to be: 1500 -31: RETVAL: 0 -31: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha -31: -31: STDERR: -31: Not an error -34: RETVAL: 0 -34: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha -34: -34: STDERR: -34: Not an error - 24/578 Test #30: rect-2 ................................ Passed 0.31 sec - 25/578 Test #31: rect-2s ............................... Passed 0.29 sec + 28/578 Test #43: rect-11-roi ........................... Passed 0.14 sec test 72 Start 72: vf-zero 72: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-zero" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--xf-zero;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 72: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 72: Test timeout computed to be: 1500 +66: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +66: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha;--output-type;uchar;--pattern;sphere;--origin;-19 -19 -19;--dim;20 20 20;--spacing;2 2 2;--background;0;--foreground;1;--center;0 0 0;--radius;21 +66: EXPECTED_ERRNO is +44: RETVAL: 0 +44: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha +44: +44: STDERR: +44: Not an error + 29/578 Test #44: rect-12 ............................... Passed 0.15 sec test 73 Start 73: vf-trans-1 @@ -6502,86 +6563,85 @@ 46: 46: STDERR: 46: Not an error - 26/578 Test #34: rect-5 ................................ Passed 0.30 sec - 27/578 Test #46: rect-14 ............................... Passed 0.25 sec + 30/578 Test #46: rect-14 ............................... Passed 0.13 sec test 74 Start 74: vf-trans-2 74: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;--xf-trans;0 10 0;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 74: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 74: Test timeout computed to be: 1500 -test 99 - Start 99: drr-a - -99: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -99: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -99: Test timeout computed to be: 1500 72: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 72: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--xf-zero;--dim;38 38 38 72: EXPECTED_ERRNO is -66: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -66: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha;--output-type;uchar;--pattern;sphere;--origin;-19 -19 -19;--dim;20 20 20;--spacing;2 2 2;--background;0;--foreground;1;--center;0 0 0;--radius;21 -66: EXPECTED_ERRNO is -32: RETVAL: 0 -32: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -32: Doing extraction -32: Keyholizing structure 0. -32: Write: DoseGridScaling = 0.000000 -32: -32: STDERR: -32: Not an error -74: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -74: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;--xf-trans;0 10 0;--dim;38 38 38 -74: EXPECTED_ERRNO is 73: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 73: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--xf-trans;10 0 0;--dim;38 38 38 73: EXPECTED_ERRNO is - 28/578 Test #32: rect-3 ................................ Passed 0.33 sec +74: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +74: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;--xf-trans;0 10 0;--dim;38 38 38 +74: EXPECTED_ERRNO is +47: RETVAL: 0 +47: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha +47: +47: STDERR: +47: Not an error + 31/578 Test #47: rect-15 ............................... Passed 0.15 sec +test 99 + Start 99: drr-a + +99: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +99: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +99: Test timeout computed to be: 1500 +48: RETVAL: 0 +48: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha +48: +48: STDERR: +57: RETVAL: 0 +57: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha +57: +57: STDERR: +57: Not an error +48: Not an error + 32/578 Test #57: rectarr-03-a .......................... Passed 0.11 sec test 187 Start 187: plm-convert-dicom-a 187: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha;--output-ss-list;plm-convert-dicom-a-ss.txt;--output-cxt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 187: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 187: Test timeout computed to be: 1500 -44: RETVAL: 0 -44: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha -44: -44: STDERR: -44: Not an error - 29/578 Test #44: rect-12 ............................... Passed 0.31 sec + 33/578 Test #48: rect-16 ............................... Passed 0.13 sec test 285 Start 285: plm-reg-itk-translation 285: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-translation" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 285: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 285: Test timeout computed to be: 1500 +62: RETVAL: 0 +62: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha +62: +62: STDERR: +62: Not an error 99: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 99: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 99: EXPECTED_ERRNO is -47: RETVAL: 0 -47: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha -47: -47: STDERR: -47: Not an error -187: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -187: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha;--output-ss-list;plm-convert-dicom-a-ss.txt;--output-cxt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix -187: EXPECTED_ERRNO is - 30/578 Test #47: rect-15 ............................... Passed 0.30 sec + 34/578 Test #62: sphere-1 .............................. Passed 0.11 sec test 317 Start 317: plm-bsp-mse-h 317: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 317: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 317: Test timeout computed to be: 1500 +49: RETVAL: 0 +49: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha +49: +49: STDERR: +49: Not an error +187: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +187: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha;--output-ss-list;plm-convert-dicom-a-ss.txt;--output-cxt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix +187: EXPECTED_ERRNO is 285: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 285: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation.txt 285: EXPECTED_ERRNO is -45: RETVAL: 0 -45: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha -45: -45: STDERR: -45: Not an error - 31/578 Test #45: rect-13 ............................... Passed 0.36 sec + 35/578 Test #49: rect-17 ............................... Passed 0.13 sec test 340 Start 340: plm-bsp-mi-c-2 @@ -6595,63 +6655,58 @@ 63: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 63: 63: STDERR: +340: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +340: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2.txt +340: EXPECTED_ERRNO is 63: Not an error - 32/578 Test #63: sphere-2 .............................. Passed 0.18 sec + 36/578 Test #63: sphere-2 .............................. Passed 0.13 sec test 443 Start 443: plm-reg-compose 443: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-compose" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-reg-compose.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 443: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 443: Test timeout computed to be: 1500 -48: RETVAL: 0 -48: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha -48: -48: STDERR: -48: Not an error - 33/578 Test #48: rect-16 ............................... Passed 0.23 sec +66: RETVAL: 0 +66: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha +66: +66: STDERR: +64: RETVAL: 0 +64: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha +66: Not an error +64: +64: STDERR: +64: Not an error + 37/578 Test #66: sphere-5 .............................. Passed 0.11 sec test 530 Start 530: plm-xf-convert-d 530: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-type;itk_bspline" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 530: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 530: Test timeout computed to be: 1500 -340: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -340: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2.txt -340: EXPECTED_ERRNO is -443: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -443: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-reg-compose.txt -443: EXPECTED_ERRNO is -57: RETVAL: 0 -57: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha -57: -57: STDERR: -57: Not an error - 34/578 Test #57: rectarr-03-a .......................... Passed 0.23 sec + 38/578 Test #64: sphere-3 .............................. Passed 0.13 sec test 4 Start 4: cyl-2 4: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 4: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 4: Test timeout computed to be: 1500 +443: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +443: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-reg-compose.txt +443: EXPECTED_ERRNO is 530: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 530: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-type;itk_bspline 530: EXPECTED_ERRNO is -64: RETVAL: 0 -64: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha -64: -64: STDERR: -64: Not an error - 35/578 Test #64: sphere-3 .............................. Passed 0.22 sec -test 6 - Start 6: cyl-3 - -6: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -6: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -6: Test timeout computed to be: 1500 -4: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -4: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd -4: EXPECTED_ERRNO is 73: RETVAL: 0 +72: RETVAL: 0 +72: STDOUT: Setting header +72: Origin = -243.4211 -243.4211 -243.4211 +72: Size = 38 38 38 +72: Spacing = 13.1579 13.1579 13.1579 +72: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +72: Header was set +72: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha +72: +72: STDERR: 73: STDOUT: Setting header 73: Origin = -243.4211 -243.4211 -243.4211 73: Size = 38 38 38 @@ -6661,107 +6716,158 @@ 73: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 73: 73: STDERR: -49: RETVAL: 0 -49: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha -49: -49: STDERR: +72: Not an error 73: Not an error -49: Not an error - 36/578 Test #73: vf-trans-1 ............................ Passed 0.19 sec + 39/578 Test #73: vf-trans-1 ............................ Passed 0.11 sec +test 6 + Start 6: cyl-3 + +6: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +6: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +6: Test timeout computed to be: 1500 + 40/578 Test #72: vf-zero ............................... Passed 0.13 sec +4: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +4: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd +4: EXPECTED_ERRNO is test 22 Start 22: lung-2 22: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=lung-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2-dicom;--pattern;lung;--lung-tumor-pos;-5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 22: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 22: Test timeout computed to be: 1500 - 37/578 Test #49: rect-17 ............................... Passed 0.28 sec +21: RETVAL: 0 +21: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha +21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Body.mha +21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Tumor.mha +21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Lung.mha +21: Doing extraction +21: Keyholizing structure 0. +21: Keyholizing structure 1. +21: Keyholizing structure 2. +21: Write: DoseGridScaling = 0.000000 +21: +21: STDERR: +21: Not an error + 41/578 Test #21: lung-1 ................................ Passed 0.39 sec test 37 Start 37: rect-8 37: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-8" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-30 70 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 37: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 37: Test timeout computed to be: 1500 -62: RETVAL: 0 -62: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha -62: -62: STDERR: -62: Not an error - 38/578 Test #62: sphere-1 .............................. Passed 0.29 sec +74: RETVAL: 0 +74: STDOUT: Setting header +74: Origin = -243.4211 -243.4211 -243.4211 +74: Size = 38 38 38 +74: Spacing = 13.1579 13.1579 13.1579 +74: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +74: Header was set +74: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha +74: +74: STDERR: +74: Not an error + 42/578 Test #74: vf-trans-2 ............................ Passed 0.12 sec test 38 Start 38: rect-9 38: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-9" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha;--output-type;uchar;--pattern;rect;--dim;47 47 47;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 38: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 38: Test timeout computed to be: 1500 -6: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -6: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd -6: EXPECTED_ERRNO is 22: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 22: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2-dicom;--pattern;lung;--lung-tumor-pos;-5 22: EXPECTED_ERRNO is +6: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +6: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd +6: EXPECTED_ERRNO is 37: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 37: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-30 70 -50 50 -50 50 37: EXPECTED_ERRNO is 38: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 38: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha;--output-type;uchar;--pattern;rect;--dim;47 47 47;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50 38: EXPECTED_ERRNO is -74: RETVAL: 0 -74: STDOUT: Setting header -74: Origin = -243.4211 -243.4211 -243.4211 -74: Size = 38 38 38 -74: Spacing = 13.1579 13.1579 13.1579 -74: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -74: Header was set -74: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha -74: -74: STDERR: -74: Not an error - 39/578 Test #74: vf-trans-2 ............................ Passed 0.23 sec +285: RETVAL: 0 +285: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +285: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +285: Launching registration worker thread +285: Inside registration worker thread +285: Doing registration stage +285: [1] xf_in->m_type = 0, xf_out->m_type = 0 +285: Fixed image for this stage: +285: Dim = 19 19 19 +285: Origin = -24.3421 -24.3421 -24.3421 +285: Spacing = 2.63158 2.63158 2.63158 +285: Direction Cosines = +285: 1 0 0 +285: 0 1 0 +285: 0 0 1 +285: Moving image for this stage: +285: Dim = 19 19 19 +285: Origin = -24.3421 -24.3421 -24.3421 +285: Spacing = 2.63158 2.63158 2.63158 +285: Direction Cosines = +285: 1 0 0 +285: 0 1 0 +285: 0 0 1 +285: Initial Parameters = [0, 0, 0] +285: Starting ITK registration +285: StartEvent: [0, 0, 0] +285: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987488, -0.004883617032987256] +285: :: [0, 0, 0] +285: * +285: MSE [ 1, 1, 5.00] 1.116 [5.318441699151528, 1.2366948554205819, 1.2366948554205908] -18755.12 +285: :: [9.999997615028182, -0.004883617032987488, -0.004883617032987256] +285: * +285: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085832, 0.5310844064631243, 0.5310844064631259] 5543.49 +285: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442488, -0.0704547497505017, -0.07045474975050225] -4090.90 +285: MSE [ 4, 4, 1.25] 4.252 [10.130622373667467, 0.8052975809356713, 0.8052975809356699] -1449.45 +285: EndEvent: [10.130622373667467, 0.8052975809356713, 0.8052975809356699] +285: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. +285: ITK registration complete +285: [2] xf_out->m_type = 1, xf_in->m_type = 0 +285: ** Registration worker thread finished. +285: Writing transformation ... +285: Warping... +285: plm_warp_itk: xform_to_itk_vf +285: plm_warp_itk: convert_to_itk +285: plm_warp_itk: warping... +285: Saving image... +285: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha +285: Saving vf... +285: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha +285: Load: 0.01899 +285: Run: 0.0205741 +285: Save: 0.00630593 +285: Total: 0.0458701 +285: Finished! +285: +285: STDERR: +285: Not an error + 43/578 Test #285: plm-reg-itk-translation ............... Passed 0.15 sec test 52 Start 52: rectarr-01-a 52: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-01-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;-1000;--foreground;0;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 52: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 52: Test timeout computed to be: 1500 -72: RETVAL: 0 -72: STDOUT: Setting header -72: Origin = -243.4211 -243.4211 -243.4211 -72: Size = 38 38 38 -72: Spacing = 13.1579 13.1579 13.1579 -72: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -72: Header was set -72: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha -72: -72: STDERR: -72: Not an error - 40/578 Test #72: vf-zero ............................... Passed 0.26 sec +52: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +52: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;-1000;--foreground;0;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1 +52: EXPECTED_ERRNO is +6: RETVAL: 0 +6: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd +6: Finished! +6: +6: STDERR: +6: Not an error + 44/578 Test #6: cyl-3 ................................. Passed 0.16 sec test 58 Start 58: rectarr-03 58: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-03" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-5 5 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 58: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 58: Test timeout computed to be: 1500 -52: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -52: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;-1000;--foreground;0;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1 -52: EXPECTED_ERRNO is -66: RETVAL: 0 -66: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha -66: -66: STDERR: -66: Not an error - 41/578 Test #66: sphere-5 .............................. Passed 0.30 sec -test 59 - Start 59: rectarr-04 - -59: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-04" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -59: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -59: Test timeout computed to be: 1500 58: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 58: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-5 5 5 15 -5 5 58: EXPECTED_ERRNO is -59: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -59: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5 -59: EXPECTED_ERRNO is 530: RETVAL: 0 530: STDOUT: bspline_xform_initialize 530: rdims = (2,2,2) @@ -6772,16 +6878,89 @@ 530: 530: STDERR: 530: Not an error - 42/578 Test #530: plm-xf-convert-d ...................... Passed 0.22 sec + 45/578 Test #530: plm-xf-convert-d ...................... Passed 0.21 sec +test 59 + Start 59: rectarr-04 + +59: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-04" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +59: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +59: Test timeout computed to be: 1500 +59: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +59: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5 +59: EXPECTED_ERRNO is +52: RETVAL: 0 +52: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha +52: +52: STDERR: +52: Not an error + 46/578 Test #52: rectarr-01-a .......................... Passed 0.14 sec test 67 Start 67: sphere-6 67: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 67: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 67: Test timeout computed to be: 1500 +38: RETVAL: 0 +38: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha +38: +38: STDERR: +38: Not an error 67: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 67: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 + 47/578 Test #38: rect-9 ................................ Passed 0.24 sec +test 68 + Start 68: sphere-7 + +68: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-7" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +68: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +68: Test timeout computed to be: 1500 67: EXPECTED_ERRNO is +187: RETVAL: 0 +187: STDOUT: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757253RTSTRUCT +187: Found DCM_ReferencedFrameOfReferenceSequence! +187: Found DCM_RTReferencedStudySequence! +187: Trying to load rt structure set. +187: Adding structure (1), Foreground +187: Structure 1 has color 255\0\0 +187: Setting PIH from rasterization heuristicsPIH is: +187: Origin = -55.2632 -55.2632 -46.0526 +187: Size = 512 512 7 +187: Spacing = 0.2159 0.2159 13.1579 +187: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +187: Rt_study_warp: Convert ss_img to cxt. +187: Rt_study_warp: Apply dicom_dir. +187: Rt_study_warp: Set geometry from PIH. +187: Rt_study_warp: Set rasterization geometry. +187: rast_dim = 512 512 7 +187: rast_offset = -55.2632 -55.2632 -46.0526 +187: rast_spacing = 0.215872 0.215872 13.1579 +187: Rt_study_warp: warp and save ss. +187: Warp_and_save_ss: seg->rasterize +187: Rasterizing... +187: Converting... +187: Finished rasterization. +187: Warp_and_save_ss: save_ss_img +187: save_ss_img: save_ss_image +187: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha +187: save_ss_img: save_ss_list +187: Done. +187: save_ss_img: save_prefix +187: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix/Foreground.mha +187: save_ss_img: save_cxt +187: Finished! +187: +187: STDERR: +187: Not an error + 48/578 Test #187: plm-convert-dicom-a ................... Passed 0.33 sec +test 75 + Start 75: vf-radial-1 + +75: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +75: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +75: Test timeout computed to be: 1500 +68: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +68: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 +68: EXPECTED_ERRNO is 317: RETVAL: 0 317: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 317: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -6812,22 +6991,22 @@ 317: Setting nmax, mmax = 375 21 317: >>> START 317: This problem is unconstrained. -317: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.002 s ] +317: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.001 s ] 317: CMIN 0.00 CAVG 0.00 CMAX 0.00 317: LSD 0.00 -317: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.010 s ] +317: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.013 s ] 317: CMIN -0.07 CAVG 0.01 CMAX 0.68 317: LSD 1.00 317: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.001 s ] 317: CMIN -0.35 CAVG 0.05 CMAX 3.40 317: LSD 5.00 -317: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.001 s ] +317: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.014 s ] 317: CMIN -1.48 CAVG 0.20 CMAX 14.26 317: LSD 21.00 317: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.001 s ] 317: CMIN -1.74 CAVG 0.44 CMAX 32.50 317: LSD 27.95 -317: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.001 s ] +317: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.014 s ] 317: CMIN -1.73 CAVG 0.34 CMAX 23.99 317: LSD 13.11 317: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -6858,97 +7037,15 @@ 317: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha 317: Saving vf... 317: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-vf.mha -317: Load: 0.0573831 -317: Run: 0.0453119 -317: Save: 0.0689731 -317: Total: 0.171668 +317: Load: 0.0180709 +317: Run: 0.0678201 +317: Save: 0.0812421 +317: Total: 0.167133 317: Finished! 317: 317: STDERR: 317: Not an error -285: RETVAL: 0 -285: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -285: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -285: Launching registration worker thread -285: Inside registration worker thread -285: Doing registration stage -285: [1] xf_in->m_type = 0, xf_out->m_type = 0 -285: Fixed image for this stage: -285: Dim = 19 19 19 -285: Origin = -24.3421 -24.3421 -24.3421 -285: Spacing = 2.63158 2.63158 2.63158 -285: Direction Cosines = -285: 1 0 0 -285: 0 1 0 -285: 0 0 1 -285: Moving image for this stage: -285: Dim = 19 19 19 -285: Origin = -24.3421 -24.3421 -24.3421 -285: Spacing = 2.63158 2.63158 2.63158 -285: Direction Cosines = -285: 1 0 0 -285: 0 1 0 -285: 0 0 1 -285: Initial Parameters = [0, 0, 0] -285: Starting ITK registration -285: StartEvent: [0, 0, 0] -285: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987453, -0.004883617032986772] -285: :: [0, 0, 0] -285: * -285: MSE [ 1, 1, 5.00] 1.116 [5.318441699151488, 1.2366948554205894, 1.2366948554204342] -18755.12 -285: :: [9.999997615028182, -0.004883617032987453, -0.004883617032986772] -285: * -285: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085816, 0.5310844064631238, 0.5310844064630558] 5543.49 -285: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442492, -0.07045474975050436, -0.0704547497504936] -4090.90 -285: MSE [ 4, 4, 1.25] 4.252 [10.13062237366743, 0.805297580935725, 0.8052975809356303] -1449.45 -285: EndEvent: [10.13062237366743, 0.805297580935725, 0.8052975809356303] -285: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. -285: ITK registration complete -285: [2] xf_out->m_type = 1, xf_in->m_type = 0 -285: Writing transformation ... -285: ** Registration worker thread finished. -285: Warping... -285: plm_warp_itk: xform_to_itk_vf -285: plm_warp_itk: convert_to_itk -285: plm_warp_itk: warping... -285: Saving image... -285: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha -285: Saving vf... -285: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha -285: Load: 0.0619652 -285: Run: 0.0181899 -285: Save: 0.012768 -285: Total: 0.0929232 -285: Finished! -285: -285: STDERR: -285: Not an error - 43/578 Test #317: plm-bsp-mse-h ......................... Passed 0.36 sec - 44/578 Test #285: plm-reg-itk-translation ............... Passed 0.39 sec -test 68 - Start 68: sphere-7 - -68: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-7" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -68: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -68: Test timeout computed to be: 1500 -test 75 - Start 75: vf-radial-1 - -75: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -75: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -75: Test timeout computed to be: 1500 -68: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -68: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 -68: EXPECTED_ERRNO is -75: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -75: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38 -75: EXPECTED_ERRNO is -52: RETVAL: 0 -52: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha -52: -52: STDERR: -52: Not an error - 45/578 Test #52: rectarr-01-a .......................... Passed 0.33 sec + 49/578 Test #317: plm-bsp-mse-h ......................... Passed 0.34 sec test 91 Start 91: plm-diff-a @@ -6960,82 +7057,63 @@ 37: 37: STDERR: 37: Not an error - 46/578 Test #37: rect-8 ................................ Passed 0.39 sec + 50/578 Test #37: rect-8 ................................ Passed 0.29 sec test 94 Start 94: plm-diff-b 94: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=diff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 94: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 94: Test timeout computed to be: 1500 +75: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +75: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38 +75: EXPECTED_ERRNO is 4: RETVAL: 0 4: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd 4: Finished! 4: 4: STDERR: 4: Not an error - 47/578 Test #4: cyl-2 ................................. Passed 0.45 sec + 51/578 Test #4: cyl-2 ................................. Passed 0.35 sec test 102 Start 102: drr-b 102: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b/out_;-i;uniform;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 102: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 102: Test timeout computed to be: 1500 -187: RETVAL: 0 -187: STDOUT: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502729RTSTRUCT -187: Found DCM_ReferencedFrameOfReferenceSequence! -187: Found DCM_RTReferencedStudySequence! -187: Trying to load rt structure set. -187: Adding structure (1), Foreground -187: Structure 1 has color 255\0\0 -187: Setting PIH from rasterization heuristicsPIH is: -187: Origin = -55.2632 -55.2632 -46.0526 -187: Size = 512 512 7 -187: Spacing = 0.2159 0.2159 13.1579 -187: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -187: Rt_study_warp: Convert ss_img to cxt. -187: Rt_study_warp: Apply dicom_dir. -187: Rt_study_warp: Set geometry from PIH. -187: Rt_study_warp: Set rasterization geometry. -187: rast_dim = 512 512 7 -187: rast_offset = -55.2632 -55.2632 -46.0526 -187: rast_spacing = 0.215872 0.215872 13.1579 -187: Rt_study_warp: warp and save ss. -187: Warp_and_save_ss: seg->rasterize -187: Rasterizing... -187: Converting... -187: Finished rasterization. -187: Warp_and_save_ss: save_ss_img -187: save_ss_img: save_ss_image -187: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha -187: save_ss_img: save_ss_list -187: Done. -187: save_ss_img: save_prefix -187: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix/Foreground.mha -187: save_ss_img: save_cxt -187: Finished! -187: -187: STDERR: -187: Not an error -38: RETVAL: 0 -38: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha -38: -38: STDERR: - 48/578 Test #187: plm-convert-dicom-a ................... Passed 0.57 sec -38: Not an error +94: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +94: PARMS is diff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha +94: EXPECTED_ERRNO is +91: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +91: PARMS is diff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha +91: EXPECTED_ERRNO is +102: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +102: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b/out_;-i;uniform;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +102: EXPECTED_ERRNO is +58: RETVAL: 0 +58: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha +58: +58: STDERR: +58: Not an error + 52/578 Test #58: rectarr-03 ............................ Passed 0.22 sec test 105 Start 105: drr-c 105: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 105: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 105: Test timeout computed to be: 1500 -91: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -91: PARMS is diff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha -91: EXPECTED_ERRNO is - 49/578 Test #38: rect-9 ................................ Passed 0.42 sec +105: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +105: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha +105: EXPECTED_ERRNO is +68: RETVAL: 0 +68: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha +68: +68: STDERR: +68: Not an error 59: RETVAL: 0 59: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha 59: 59: STDERR: + 53/578 Test #68: sphere-7 .............................. Passed 0.24 sec test 114 Start 114: landmark-warp-a @@ -7043,109 +7121,65 @@ 114: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 114: Test timeout computed to be: 1500 59: Not an error -6: RETVAL: 0 -6: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd -6: Finished! -6: -6: STDERR: - 50/578 Test #59: rectarr-04 ............................ Passed 0.35 sec -6: Not an error +22: RETVAL: 0 +22: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha +22: Doing extraction +22: Keyholizing structure 0. +22: Keyholizing structure 1. +22: Keyholizing structure 2. +22: Write: DoseGridScaling = 0.000000 +22: +22: STDERR: +22: Not an error + 54/578 Test #22: lung-2 ................................ Passed 0.50 sec + 55/578 Test #59: rectarr-04 ............................ Passed 0.31 sec +75: RETVAL: 0 +75: STDOUT: Setting header +75: Origin = -243.4211 -243.4211 -243.4211 +75: Size = 38 38 38 +75: Spacing = 13.1579 13.1579 13.1579 +75: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +75: Header was set +75: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha +75: +75: STDERR: test 119 Start 119: landmark-warp-b 119: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;wendland;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha;-r;90;-d;0;-Y;0.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 119: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 119: Test timeout computed to be: 1500 - 51/578 Test #6: cyl-3 ................................. Passed 0.47 sec test 124 Start 124: landmark-warp-c 124: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;gauss;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;-r;74;-d;0;-Y;1.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 124: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 124: Test timeout computed to be: 1500 -67: RETVAL: 0 -67: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha -67: -67: STDERR: -67: Not an error -94: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -94: PARMS is diff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha -94: EXPECTED_ERRNO is - 52/578 Test #67: sphere-6 .............................. Passed 0.31 sec +75: Not an error +114: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +114: PARMS is lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha +114: EXPECTED_ERRNO is + 56/578 Test #75: vf-radial-1 ........................... Passed 0.24 sec test 130 Start 130: plm-add-a 130: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 130: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 130: Test timeout computed to be: 1500 -105: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -105: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c/out_;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha -105: EXPECTED_ERRNO is -102: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -102: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b/out_;-i;uniform;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -102: EXPECTED_ERRNO is -114: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -114: PARMS is lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha -114: EXPECTED_ERRNO is -58: RETVAL: 0 -58: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha -58: -58: STDERR: -58: Not an error +119: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +119: PARMS is lm-warp;-a;wendland;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha;-r;90;-d;0;-Y;0.0 +119: EXPECTED_ERRNO is 124: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 124: PARMS is lm-warp;-a;gauss;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;-r;74;-d;0;-Y;1.0 124: EXPECTED_ERRNO is 130: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 130: PARMS is add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 130: EXPECTED_ERRNO is - 53/578 Test #58: rectarr-03 ............................ Passed 0.43 sec -test 133 - Start 133: plm-add-b - -133: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -133: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -133: Test timeout computed to be: 1500 -119: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -119: PARMS is lm-warp;-a;wendland;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha;-r;90;-d;0;-Y;0.0 -119: EXPECTED_ERRNO is -133: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -133: PARMS is average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -133: EXPECTED_ERRNO is -68: RETVAL: 0 -68: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha -68: -68: STDERR: -68: Not an error - 54/578 Test #68: sphere-7 .............................. Passed 0.33 sec -test 136 - Start 136: plm-add-vf-a - -136: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -136: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -136: Test timeout computed to be: 1500 -136: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -136: PARMS is add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha -136: EXPECTED_ERRNO is -21: RETVAL: 0 -21: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha -21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Body.mha -21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Tumor.mha -21: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Lung.mha -21: Doing extraction -21: Keyholizing structure 0. -21: Keyholizing structure 1. -21: Keyholizing structure 2. -21: Write: DoseGridScaling = 0.000000 -21: -21: STDERR: -21: Not an error - 55/578 Test #21: lung-1 ................................ Passed 1.20 sec -test 139 - Start 139: plm-add-vf-b - -139: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -139: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -139: Test timeout computed to be: 1500 +67: RETVAL: 0 +67: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha +67: +67: STDERR: +67: Not an error 443: RETVAL: 0 443: STDOUT: Loading fixed image [0]: gauss-2.mha 443: Loading moving image [0]: gauss-5.mha @@ -7176,37 +7210,37 @@ 443: Setting nmax, mmax = 375 21 443: >>> START 443: This problem is unconstrained. -443: [ 0, 0] MSE 13049.518 NV 6859 GM -1702.194 GN 529 [ 0.048 s ] +443: [ 0, 0] MSE 13049.518 NV 6859 GM -1702.194 GN 529 [ 0.065 s ] 443: CMIN 0.00 CAVG 0.00 CMAX 0.00 443: LSD 0.00 443: [ 0, 1] MSE 12469.547 NV 6859 GM -1637.952 GN 509 [ 0.032 s ] 443: CMIN -0.05 CAVG 0.01 CMAX 0.74 443: LSD 1.00 -443: [ 0, 2] MSE 10357.764 NV 6859 GM -1646.825 GN 515 [ 0.016 s ] +443: [ 0, 2] MSE 10357.764 NV 6859 GM -1646.825 GN 515 [ 0.056 s ] 443: CMIN -0.26 CAVG 0.04 CMAX 3.71 443: LSD 5.00 -443: [ 0, 3] MSE 1944.747 NV 6295 GM -809.887 GN 247 [ 0.040 s ] +443: [ 0, 3] MSE 1944.747 NV 6295 GM -809.887 GN 247 [ 0.016 s ] 443: CMIN -1.11 CAVG 0.18 CMAX 15.56 443: LSD 21.00 -443: [ 1, 4] MSE 891.268 NV 5678 GM 504.524 GN 187 [ 0.040 s ] +443: [ 1, 4] MSE 891.268 NV 5678 GM 504.524 GN 187 [ 0.036 s ] 443: CMIN -1.50 CAVG 0.35 CMAX 29.17 443: LSD 19.59 -443: [ 2, 5] MSE 117.931 NV 5939 GM -11.010 GN 12.8 [ 0.019 s ] +443: [ 2, 5] MSE 117.931 NV 5939 GM -11.010 GN 12.8 [ 0.035 s ] 443: CMIN -1.27 CAVG 0.29 CMAX 23.54 443: LSD 8.47 -443: [ 3, 6] MSE 110.217 NV 5931 GM -24.361 GN 9.26 [ 0.045 s ] +443: [ 3, 6] MSE 110.217 NV 5931 GM -24.361 GN 9.26 [ 0.020 s ] 443: CMIN -1.44 CAVG 0.29 CMAX 23.60 443: LSD 0.55 -443: [ 4, 7] MSE 101.235 NV 5928 GM -14.715 GN 10.7 [ 0.040 s ] +443: [ 4, 7] MSE 101.235 NV 5928 GM -14.715 GN 10.7 [ 0.031 s ] 443: CMIN -1.88 CAVG 0.29 CMAX 23.41 443: LSD 1.34 -443: [ 5, 8] MSE 89.096 NV 5930 GM -23.801 GN 14.1 [ 0.020 s ] +443: [ 5, 8] MSE 89.096 NV 5930 GM -23.801 GN 14.1 [ 0.032 s ] 443: CMIN -2.79 CAVG 0.31 CMAX 22.44 443: LSD 2.74 -443: [ 6, 9] MSE 76.413 NV 5947 GM 60.289 GN 16.9 [ 0.040 s ] +443: [ 6, 9] MSE 76.413 NV 5947 GM 60.289 GN 16.9 [ 0.016 s ] 443: CMIN -4.30 CAVG 0.34 CMAX 20.28 443: LSD 5.25 -443: [ 7, 10] MSE 68.670 NV 5976 GM -50.552 GN 14.5 [ 0.020 s ] +443: [ 7, 10] MSE 68.670 NV 5976 GM -50.552 GN 14.5 [ 0.035 s ] 443: CMIN -6.00 CAVG 0.36 CMAX 17.22 443: LSD 5.96 443: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -7237,106 +7271,143 @@ 443: Trying to write image to plm-reg-compose-img.mha 443: Saving vf... 443: Trying to write image to plm-reg-compose-vf.mha -443: Load: 0.0776088 -443: Run: 0.398317 -443: Save: 0.050828 -443: Total: 0.526754 +443: Load: 0.018609 +443: Run: 0.3918 +443: Save: 0.0278392 +443: Total: 0.438248 443: Finished! 443: 443: STDERR: 443: Not an error - 56/578 Test #443: plm-reg-compose ....................... Passed 0.77 sec + 57/578 Test #443: plm-reg-compose ....................... Passed 0.58 sec + 58/578 Test #67: sphere-6 .............................. Passed 0.33 sec +test 133 + Start 133: plm-add-b + +133: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +133: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +133: Test timeout computed to be: 1500 +test 136 + Start 136: plm-add-vf-a + +136: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +136: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +136: Test timeout computed to be: 1500 +133: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +133: PARMS is average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +133: EXPECTED_ERRNO is +94: RETVAL: 0 +94: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha +94: +94: STDERR: +94: Not an error + 59/578 Test #94: plm-diff-b ............................ Passed 0.34 sec +136: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +136: PARMS is add;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha +136: EXPECTED_ERRNO is +test 139 + Start 139: plm-add-vf-b + +139: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +139: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +139: Test timeout computed to be: 1500 +139: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +139: PARMS is average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha +139: EXPECTED_ERRNO is +99: RETVAL: 0 +99: STDOUT: Rendering DRR 0 +99: I/O time: 0.000365 sec +99: Rendering DRR 1 +99: I/O time: 0.000263 sec +99: Rendering DRR 2 +99: I/O time: 0.000288 sec +99: Rendering DRR 3 +99: I/O time: 0.000257 sec +99: Rendering DRR 4 +99: I/O time: 0.000267 sec +99: Rendering DRR 5 +99: I/O time: 0.000304 sec +99: Rendering DRR 6 +99: I/O time: 0.000259 sec +99: Rendering DRR 7 +99: I/O time: 0.000265 sec +99: Rendering DRR 8 +99: I/O time: 0.000281 sec +99: Rendering DRR 9 +99: I/O time: 0.000265 sec +99: Rendering DRR 10 +99: I/O time: 0.000243 sec +99: Rendering DRR 11 +99: I/O time: 0.000259 sec +99: Rendering DRR 12 +99: I/O time: 0.000263 sec +99: Rendering DRR 13 +99: I/O time: 0.000242 sec +99: Rendering DRR 14 +99: I/O time: 0.000267 sec +99: Rendering DRR 15 +99: I/O time: 0.000327 sec +99: Rendering DRR 16 +99: I/O time: 0.000298 sec +99: Rendering DRR 17 +99: I/O time: 0.000315 sec +99: Rendering DRR 18 +99: I/O time: 0.000368 sec +99: Rendering DRR 19 +99: I/O time: 0.000291 sec +99: Total time: 0.624346 secs +99: +99: STDERR: +99: Not an error +133: RETVAL: 0 +133: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd +133: +133: STDERR: +133: Not an error + 60/578 Test #133: plm-add-b ............................. Passed 0.22 sec test 142 Start 142: plm-adjust-a 142: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd;--pw-linear;0,100" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 142: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 142: Test timeout computed to be: 1500 -139: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -139: PARMS is average;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha -139: EXPECTED_ERRNO is + 61/578 Test #99: drr-a ................................. Passed 0.85 sec +test 108 + Start 108: fdk-cpu-a + +108: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +108: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +108: Test timeout computed to be: 1500 +130: RETVAL: 0 +130: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd +130: +130: STDERR: +130: Not an error +91: RETVAL: 0 +91: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha +91: +91: STDERR: 142: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 142: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd;--pw-linear;0,100 142: EXPECTED_ERRNO is -75: RETVAL: 0 -75: STDOUT: Setting header -75: Origin = -243.4211 -243.4211 -243.4211 -75: Size = 38 38 38 -75: Spacing = 13.1579 13.1579 13.1579 -75: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -75: Header was set -75: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha -75: -75: STDERR: -75: Not an error - 57/578 Test #75: vf-radial-1 ........................... Passed 0.48 sec + 62/578 Test #130: plm-add-a ............................. Passed 0.29 sec +91: Not an error +test 111 + Start 111: fdk-cpu-d + +111: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +111: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +111: Test timeout computed to be: 1500 + 63/578 Test #91: plm-diff-a ............................ Passed 0.52 sec test 145 Start 145: plm-adjust-b 145: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd;--pw-linear;-inf,1,0,100,inf,1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 145: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 145: Test timeout computed to be: 1500 -91: RETVAL: 0 -91: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha -91: -91: STDERR: -91: Not an error - 58/578 Test #91: plm-diff-a ............................ Passed 0.40 sec -test 148 - Start 148: plm-adjust-c - -148: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -148: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -148: Test timeout computed to be: 1500 -114: RETVAL: 0 -114: STDOUT: Hello world -114: Gonna convert pointsets -114: Pointset: -114: rect-2-0 -26.271700 -52.162899 46.052799 -114: rect-2-1 65.870201 -52.543598 46.053001 -114: rect-2-2 65.870201 52.543900 46.053001 -114: rect-2-3 -25.510201 53.686199 46.053001 -114: rect-2-4 -25.891001 -52.162899 -46.052502 -114: rect-2-5 66.631699 -53.305099 -46.053001 -114: rect-2-6 65.870201 53.305401 -46.053001 -114: rect-2-7 -25.129499 53.686199 -46.053001 -114: Conversion complete. -114: -26.2717 -52.1629 46.0528 -114: 65.8702 -52.5436 46.053 -114: 65.8702 52.5439 46.053 -114: -25.5102 53.6862 46.053 -114: -25.891 -52.1629 -46.0525 -114: 66.6317 -53.3051 -46.053 -114: 65.8702 53.3054 -46.053 -114: -25.1295 53.6862 -46.053 -114: Setting landmarks to TPS -114: Computing matrix -114: Setting xform -114: Converting to VF -114: Warping... -114: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha -114: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha -114: -114: STDERR: -114: Not an error - 59/578 Test #114: landmark-warp-a ....................... Passed 0.36 sec -test 151 - Start 151: plm-adjust-d - -151: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -151: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -151: Test timeout computed to be: 1500 -145: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -145: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd;--pw-linear;-inf,1,0,100,inf,1 -145: EXPECTED_ERRNO is -148: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -148: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1 -148: EXPECTED_ERRNO is -133: RETVAL: 0 -133: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd -133: -133: STDERR: -133: Not an error +108: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +108: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha +108: EXPECTED_ERRNO is 119: RETVAL: 0 119: STDOUT: 180.000000 119: 180.000000 @@ -7375,31 +7446,163 @@ 119: 119: STDERR: 119: Not an error - 60/578 Test #133: plm-add-b ............................. Passed 0.33 sec + 64/578 Test #119: landmark-warp-b ....................... Passed 0.33 sec +test 148 + Start 148: plm-adjust-c + +148: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +148: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +148: Test timeout computed to be: 1500 +111: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +111: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha +111: EXPECTED_ERRNO is +340: RETVAL: 0 +340: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +340: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha +340: Launching registration worker thread +340: Inside registration worker thread +340: Doing registration stage +340: [1] xf_in->m_type = 0, xf_out->m_type = 0 +340: RESAMPLE 1 1: (1 1 1), (1 1 1) +340: RESAMPLE 1 1: (1 1 1), (1 1 1) +340: volume_calc_grad complete. +340: bspline_xform_initialize +340: rdims = (3,3,3) +340: vox_per_rgn = (15,15,15) +340: cdims = (6 6 6) +340: Algorithm flavor = c +340: Threading = 0 +340: >> Checking JH allocation +340: >> Performing JH allocation +340: BSPLINE PARMS +340: max_its = 10 +340: max_feval = 10 +340: BSPLINE XFORM HEADER +340: vox_per_rgn = 15 15 15 +340: roi_offset = 0 0 0 +340: roi_dim = 38 38 38 +340: img_dc = 1 0 0 0 1 0 0 0 1 +340: BST METRICS +340: MET 110100 MI 1.000000 +340: >> Performing JH initialization +340: Using alpha_0 (1.000000) +340: [ 0, 0] MI -0.3659457 NV 54872 GM -0.007 GN 0.00788 [ 0.045 s ] +340: CMIN 0.01 CAVG 0.01 CMAX 0.01 +340: [ 0, 1] MI -0.3699214 NV 54872 GM -0.056 GN 0.00867 [ 0.034 s ] +340: CMIN -0.21 CAVG 0.01 CMAX 0.30 +340: GR 0.50 NEW_A 1.00 ACCEPT? 1 +340: [ 1, 2] MI -0.3777946 NV 54872 GM -0.049 GN 0.00903 [ 0.034 s ] +340: CMIN -0.23 CAVG 0.02 CMAX 0.69 +340: GR 0.91 NEW_A 3.00 ACCEPT? 1 +340: [ 2, 3] MI -0.4137608 NV 54753 GM -0.063 GN 0.017 [ 0.038 s ] +340: CMIN -0.35 CAVG 0.05 CMAX 2.09 +340: GR 3.98 NEW_A 9.00 ACCEPT? 1 +340: [ 3, 4] MI -0.5521525 NV 53587 GM -0.081 GN 0.017 [ 0.049 s ] +340: CMIN -0.97 CAVG 0.10 CMAX 7.08 +340: GR 8.16 NEW_A 27.00 ACCEPT? 1 +340: [ 4, 5] MI -1.2166027 NV 49761 GM -0.031 GN 0.0276 [ 0.057 s ] +340: CMIN -2.22 CAVG 0.30 CMAX 20.76 +340: GR 38.97 NEW_A 81.00 ACCEPT? 1 +340: [ 5, 6] MI -0.4035923 NV 36457 GM -0.029 GN 0.0114 [ 0.046 s ] +340: CMIN -26.58 CAVG 0.44 CMAX 33.14 +340: GR -29.50 NEW_A 40.50 ACCEPT? 0 +340: [ 5, 7] MI -0.7946788 NV 43303 GM -0.068 GN 0.0215 [ 0.055 s ] +340: CMIN -14.21 CAVG 0.37 CMAX 26.12 +340: GR -15.31 NEW_A 20.25 ACCEPT? 0 +340: [ 5, 8] MI -1.1523657 NV 46825 GM -0.160 GN 0.031 [ 0.058 s ] +340: CMIN -8.02 CAVG 0.33 CMAX 23.44 +340: GR -2.33 NEW_A 10.12 ACCEPT? 0 +340: [ 5, 9] MI -1.3108922 NV 48385 GM -0.176 GN 0.0266 [ 0.046 s ] +340: CMIN -4.93 CAVG 0.31 CMAX 22.10 +340: GR 3.42 NEW_A 30.38 ACCEPT? 1 +340: [ 6, 10] MI -0.7927921 NV 46839 GM 0.149 GN 0.0234 [ 0.123 s ] +340: CMIN -2.23 CAVG 0.62 CMAX 17.80 +340: GR -19.50 NEW_A 15.19 ACCEPT? 0 +340: [2] xf_out->m_type = 9, xf_in->m_type = 0 +340: ** Registration worker thread finished. +340: Writing transformation ... +340: Warping... +340: Running: plm_warp_native +340: Converting input image... +340: Converting xform... +340: bspline_xform_initialize +340: rdims = (3,3,3) +340: vox_per_rgn = (15,15,15) +340: cdims = (6 6 6) +340: Creating output vf... +340: Creating output volume... +340: Running native warper... +340: bspline_warp complete. +340: Back convert to original type... +340: > Convert vf to itk +340: > Conversion complete. +340: plm_warp_native is complete. +340: Saving image... +340: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha +340: Saving vf... +340: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha +340: Load: 0.0201471 +340: Run: 0.638367 +340: Save: 0.0615921 +340: Total: 0.720106 +340: Finished! +340: +340: STDERR: +340: Not an error + 65/578 Test #340: plm-bsp-mi-c-2 ........................ Passed 0.88 sec +test 151 + Start 151: plm-adjust-d + +151: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +151: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +151: Test timeout computed to be: 1500 +145: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +145: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd;--pw-linear;-inf,1,0,100,inf,1 +145: EXPECTED_ERRNO is +148: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +148: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1 +148: EXPECTED_ERRNO is +151: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +151: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0 +151: EXPECTED_ERRNO is +114: RETVAL: 0 +114: STDOUT: Hello world +114: Gonna convert pointsets +114: Pointset: +114: rect-2-0 -26.271700 -52.162899 46.052799 +114: rect-2-1 65.870201 -52.543598 46.053001 +114: rect-2-2 65.870201 52.543900 46.053001 +114: rect-2-3 -25.510201 53.686199 46.053001 +114: rect-2-4 -25.891001 -52.162899 -46.052502 +114: rect-2-5 66.631699 -53.305099 -46.053001 +114: rect-2-6 65.870201 53.305401 -46.053001 +114: rect-2-7 -25.129499 53.686199 -46.053001 +114: Conversion complete. +114: -26.2717 -52.1629 46.0528 +114: 65.8702 -52.5436 46.053 +114: 65.8702 52.5439 46.053 +114: -25.5102 53.6862 46.053 +114: -25.891 -52.1629 -46.0525 +114: 66.6317 -53.3051 -46.053 +114: 65.8702 53.3054 -46.053 +114: -25.1295 53.6862 -46.053 +114: Setting landmarks to TPS +114: Computing matrix +114: Setting xform +114: Converting to VF +114: Warping... +114: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha +114: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha +114: +114: STDERR: +114: Not an error + 66/578 Test #114: landmark-warp-a ....................... Passed 0.42 sec test 154 Start 154: plm-adjust-e 154: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd;--linear;1000,2.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 154: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 154: Test timeout computed to be: 1500 - 61/578 Test #119: landmark-warp-b ....................... Passed 0.38 sec -test 157 - Start 157: plm-adjust-f - -157: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -157: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -157: Test timeout computed to be: 1500 -151: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -151: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0 -151: EXPECTED_ERRNO is -154: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -154: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd;--linear;1000,2.5 -154: EXPECTED_ERRNO is -130: RETVAL: 0 -130: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd -130: -130: STDERR: -130: Not an error 124: RETVAL: 0 124: STDOUT: 74.000000 124: 74.000000 @@ -7437,24 +7640,32 @@ 124: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha 124: 124: STDERR: - 62/578 Test #130: plm-add-a ............................. Passed 0.39 sec 124: Not an error + 67/578 Test #124: landmark-warp-c ....................... Passed 0.42 sec +test 157 + Start 157: plm-adjust-f + +157: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +157: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +157: Test timeout computed to be: 1500 +154: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +154: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd;--linear;1000,2.5 +154: EXPECTED_ERRNO is +157: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +157: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5 +157: EXPECTED_ERRNO is +139: RETVAL: 0 +139: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd +139: +139: STDERR: +139: Not an error + 68/578 Test #139: plm-add-vf-b .......................... Passed 0.35 sec test 160 Start 160: plm-adjust-g 160: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 160: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 160: Test timeout computed to be: 1500 -157: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -157: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5 -157: EXPECTED_ERRNO is - 63/578 Test #124: landmark-warp-c ....................... Passed 0.41 sec -test 163 - Start 163: plm-adjust-h - -163: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--input-mask;donut-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -163: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -163: Test timeout computed to be: 1500 160: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 160: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha 160: EXPECTED_ERRNO is @@ -7463,177 +7674,171 @@ 136: 136: STDERR: 136: Not an error + 69/578 Test #136: plm-add-vf-a .......................... Passed 0.52 sec +test 163 + Start 163: plm-adjust-h + +163: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--input-mask;donut-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +163: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +163: Test timeout computed to be: 1500 163: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 163: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--input-mask;donut-2.mha 163: EXPECTED_ERRNO is - 64/578 Test #136: plm-add-vf-a .......................... Passed 0.30 sec +151: RETVAL: 0 +151: STDOUT: Applying piece-wise linear transform... +151: done. +151: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd +151: Finished! +151: +151: STDERR: +151: Not an error + 70/578 Test #151: plm-adjust-d .......................... Passed 0.37 sec test 166 Start 166: plm-adjust-i 166: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 166: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 166: Test timeout computed to be: 1500 -99: RETVAL: 0 -99: STDOUT: Rendering DRR 0 -99: I/O time: 0.000388 sec -99: Rendering DRR 1 -99: I/O time: 0.000318 sec -99: Rendering DRR 2 -99: I/O time: 0.000357 sec -99: Rendering DRR 3 -99: I/O time: 0.000331 sec -99: Rendering DRR 4 -99: I/O time: 0.000306 sec -99: Rendering DRR 5 -99: I/O time: 0.000308 sec -99: Rendering DRR 6 -99: I/O time: 0.000311 sec -99: Rendering DRR 7 -99: I/O time: 0.000302 sec -99: Rendering DRR 8 -99: I/O time: 0.000300 sec -99: Rendering DRR 9 -99: I/O time: 0.000333 sec -99: Rendering DRR 10 -99: I/O time: 0.000292 sec -99: Rendering DRR 11 -99: I/O time: 0.000301 sec -99: Rendering DRR 12 -99: I/O time: 0.000301 sec -99: Rendering DRR 13 -99: I/O time: 0.000315 sec -99: Rendering DRR 14 -99: I/O time: 0.000319 sec -99: Rendering DRR 15 -99: I/O time: 0.000336 sec -99: Rendering DRR 16 -99: I/O time: 0.001208 sec -99: Rendering DRR 17 -99: I/O time: 0.000324 sec -99: Rendering DRR 18 -99: I/O time: 0.000307 sec -99: Rendering DRR 19 -99: I/O time: 0.000355 sec -99: Total time: 0.746596 secs -99: -99: STDERR: -99: Not an error - 65/578 Test #99: drr-a ................................. Passed 1.08 sec -test 108 - Start 108: fdk-cpu-a - -108: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -108: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -108: Test timeout computed to be: 1500 -166: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -166: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd -166: EXPECTED_ERRNO is -139: RETVAL: 0 -139: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd -139: -139: STDERR: -139: Not an error - 66/578 Test #139: plm-add-vf-b .......................... Passed 0.24 sec -test 111 - Start 111: fdk-cpu-d - -111: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -111: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -111: Test timeout computed to be: 1500 -94: RETVAL: 0 -94: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha -94: -94: STDERR: -94: Not an error -108: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -108: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha -108: EXPECTED_ERRNO is - 67/578 Test #94: plm-diff-b ............................ Passed 0.56 sec +142: RETVAL: 0 +142: STDOUT: Applying piece-wise linear transform... +142: done. +142: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd +142: Finished! +142: +142: STDERR: +142: Not an error + 71/578 Test #142: plm-adjust-a .......................... Passed 0.44 sec test 169 Start 169: plm-adjust-j 169: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-j" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd;--local-blending-off" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 169: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 169: Test timeout computed to be: 1500 -111: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -111: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha -111: EXPECTED_ERRNO is -169: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -169: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd;--local-blending-off -169: EXPECTED_ERRNO is -154: RETVAL: 0 -154: STDOUT: Applying shift=1000 and scale=2.5 ... done. -154: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd -154: Finished! -154: -154: STDERR: -154: Not an error - 68/578 Test #154: plm-adjust-e .......................... Passed 0.22 sec +148: RETVAL: 0 +148: STDOUT: Applying shift=100 and scale=1 ... done. +148: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd +148: Finished! +148: +148: STDERR: +166: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +148: Not an error +166: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd +166: EXPECTED_ERRNO is + 72/578 Test #148: plm-adjust-c .......................... Passed 0.40 sec test 172 Start 172: plm-boundary-a 172: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;adaptive;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 172: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 172: Test timeout computed to be: 1500 +169: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +169: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd;--local-match;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd;--local-blending-off +169: EXPECTED_ERRNO is 172: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 172: PARMS is boundary;--boundary-behavior;adaptive;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 172: EXPECTED_ERRNO is -22: RETVAL: 0 -22: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha -22: Doing extraction -22: Keyholizing structure 0. -22: Keyholizing structure 1. -22: Keyholizing structure 2. -22: Write: DoseGridScaling = 0.000000 -22: -22: STDERR: -22: Not an error - 69/578 Test #22: lung-2 ................................ Passed 1.12 sec +102: RETVAL: 0 +102: STDOUT: Rendering DRR 0 +102: I/O time: 0.000290 sec +102: Rendering DRR 1 +102: I/O time: 0.000387 sec +102: Rendering DRR 2 +102: I/O time: 0.000251 sec +102: Rendering DRR 3 +102: I/O time: 0.000284 sec +102: Rendering DRR 4 +102: I/O time: 0.000262 sec +102: Rendering DRR 5 +102: I/O time: 0.000319 sec +102: Rendering DRR 6 +102: I/O time: 0.000261 sec +102: Rendering DRR 7 +102: I/O time: 0.000305 sec +102: Rendering DRR 8 +102: I/O time: 0.000272 sec +102: Rendering DRR 9 +102: I/O time: 0.000267 sec +102: Rendering DRR 10 +102: I/O time: 0.000270 sec +102: Rendering DRR 11 +102: I/O time: 0.000288 sec +102: Rendering DRR 12 +102: I/O time: 0.000280 sec +102: Rendering DRR 13 +102: I/O time: 0.000279 sec +102: Rendering DRR 14 +102: I/O time: 0.000301 sec +102: Rendering DRR 15 +102: I/O time: 0.000256 sec +102: Rendering DRR 16 +102: I/O time: 0.000270 sec +102: Rendering DRR 17 +102: I/O time: 0.000278 sec +102: Rendering DRR 18 +102: I/O time: 0.000254 sec +102: Rendering DRR 19 +102: I/O time: 0.000261 sec +102: Total time: 0.654699 secs +102: +102: STDERR: +102: Not an error + 73/578 Test #102: drr-b ................................. Passed 0.92 sec test 175 Start 175: plm-boundary-b 175: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;zero-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 175: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 175: Test timeout computed to be: 1500 -166: RETVAL: 0 -166: STDOUT: Applying local intensity matching... -166: Time = 0.000351 seconds -166: Time = 0.000423 seconds -166: Time = 0.000287 seconds -166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd -166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd -166: done. -166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd -166: Finished! -166: -166: STDERR: -166: Not an error - 70/578 Test #166: plm-adjust-i .......................... Passed 0.27 sec +154: RETVAL: 0 +154: STDOUT: Applying shift=1000 and scale=2.5 ... done. +154: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd +154: Finished! +154: +154: STDERR: +154: Not an error + 74/578 Test #154: plm-adjust-e .......................... Passed 0.36 sec test 178 Start 178: plm-boundary-c 178: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;edge-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 178: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 178: Test timeout computed to be: 1500 -163: RETVAL: 0 -163: STDOUT: Computing statistics for linear match... -163: Time = 0.003605 seconds -163: Adjusting image. shift = 0.158838; scale = 0.000442518 done. -163: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd -163: Finished! -163: -163: STDERR: -163: Not an error - 71/578 Test #163: plm-adjust-h .......................... Passed 0.32 sec +157: RETVAL: 0 +157: STDOUT: Performing histogram matching... +157: done. +157: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd +157: Finished! +157: +157: STDERR: +157: Not an error +175: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +175: PARMS is boundary;--boundary-behavior;zero-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha +175: EXPECTED_ERRNO is + 75/578 Test #157: plm-adjust-f .......................... Passed 0.35 sec test 181 Start 181: plm-boundary-d 181: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;adaptive;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 181: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 181: Test timeout computed to be: 1500 -175: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -175: PARMS is boundary;--boundary-behavior;zero-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha -175: EXPECTED_ERRNO is +178: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +178: PARMS is boundary;--boundary-behavior;edge-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha +178: EXPECTED_ERRNO is +145: RETVAL: 0 +145: STDOUT: Applying piece-wise linear transform... +145: done. +145: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd +145: Finished! +145: +145: STDERR: +145: Not an error + 76/578 Test #145: plm-adjust-b .......................... Passed 0.50 sec +test 184 + Start 184: plm-boundary-e + +184: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +184: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +184: Test timeout computed to be: 1500 160: RETVAL: 0 160: STDOUT: Computing statistics for linear match... 160: Adjusting image. shift = 0.289174; scale = 0.000314475 done. @@ -7642,316 +7847,205 @@ 160: 160: STDERR: 160: Not an error - 72/578 Test #160: plm-adjust-g .......................... Passed 0.35 sec -test 184 - Start 184: plm-boundary-e - -184: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -184: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -184: Test timeout computed to be: 1500 -178: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -178: PARMS is boundary;--boundary-behavior;edge-pad;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha -178: EXPECTED_ERRNO is -151: RETVAL: 0 -151: STDOUT: Applying piece-wise linear transform... -151: done. -151: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd -151: Finished! -151: -151: STDERR: -151: Not an error -181: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -181: PARMS is boundary;--boundary-behavior;adaptive;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha -181: EXPECTED_ERRNO is - 73/578 Test #151: plm-adjust-d .......................... Passed 0.42 sec + 77/578 Test #160: plm-adjust-g .......................... Passed 0.33 sec test 190 Start 190: plm-convert-dicom-b 190: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom;--metadata;0018,5100&equal&FFS" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 190: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 190: Test timeout computed to be: 1500 -172: RETVAL: 0 -172: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd -172: -172: STDERR: -172: Not an error - 74/578 Test #172: plm-boundary-a ........................ Passed 0.18 sec +181: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +181: PARMS is boundary;--boundary-behavior;adaptive;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha +181: EXPECTED_ERRNO is +184: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +184: PARMS is boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha +184: EXPECTED_ERRNO is +190: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +190: PARMS is convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom;--metadata;0018,5100&equal&FFS +190: EXPECTED_ERRNO is +105: RETVAL: 0 +105: STDOUT: Rendering DRR 0 +105: I/O time: 0.000371 sec +105: Rendering DRR 1 +105: I/O time: 0.000255 sec +105: Rendering DRR 2 +105: I/O time: 0.000296 sec +105: Rendering DRR 3 +105: I/O time: 0.000255 sec +105: Rendering DRR 4 +105: I/O time: 0.000289 sec +105: Rendering DRR 5 +105: I/O time: 0.000280 sec +105: Rendering DRR 6 +105: I/O time: 0.000256 sec +105: Rendering DRR 7 +105: I/O time: 0.000289 sec +105: Rendering DRR 8 +105: I/O time: 0.000267 sec +105: Rendering DRR 9 +105: I/O time: 0.000268 sec +105: Rendering DRR 10 +105: I/O time: 0.000279 sec +105: Rendering DRR 11 +105: I/O time: 0.000245 sec +105: Rendering DRR 12 +105: I/O time: 0.000250 sec +105: Rendering DRR 13 +105: I/O time: 0.000255 sec +105: Rendering DRR 14 +105: I/O time: 0.000269 sec +105: Rendering DRR 15 +105: I/O time: 0.000269 sec +105: Rendering DRR 16 +105: I/O time: 0.000268 sec +105: Rendering DRR 17 +105: I/O time: 0.000237 sec +105: Rendering DRR 18 +105: I/O time: 0.000302 sec +105: Rendering DRR 19 +105: I/O time: 0.000320 sec +105: Total time: 0.715328 secs +105: +105: STDERR: +105: Not an error + 78/578 Test #105: drr-c ................................. Passed 0.98 sec test 193 Start 193: plm-convert-dicom-c 193: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom/;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 193: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 193: Test timeout computed to be: 1500 -157: RETVAL: 0 -157: STDOUT: Performing histogram matching... -157: done. -157: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd -157: Finished! -157: -157: STDERR: -157: Not an error - 75/578 Test #157: plm-adjust-f .......................... Passed 0.41 sec +193: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +193: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom/;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix +193: EXPECTED_ERRNO is +166: RETVAL: 0 +166: STDOUT: Applying local intensity matching... +166: Time = 0.000270 seconds +166: Time = 0.000240 seconds +166: Time = 0.000181 seconds +166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd +166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd +166: done. +166: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd +166: Finished! +166: +166: STDERR: +166: Not an error + 79/578 Test #166: plm-adjust-i .......................... Passed 0.20 sec test 199 Start 199: plm-convert-dicom-donut-a 199: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 199: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 199: Test timeout computed to be: 1500 -184: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -184: PARMS is boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha -184: EXPECTED_ERRNO is -190: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -190: PARMS is convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom;--metadata;0018,5100&equal&FFS -190: EXPECTED_ERRNO is -142: RETVAL: 0 -142: STDOUT: Applying piece-wise linear transform... -142: done. -142: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd -142: Finished! -142: -142: STDERR: -142: Not an error - 76/578 Test #142: plm-adjust-a .......................... Passed 0.59 sec +175: RETVAL: 0 +175: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd +175: +175: STDERR: +175: Not an error +199: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +199: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd +199: EXPECTED_ERRNO is + 80/578 Test #175: plm-boundary-b ........................ Passed 0.18 sec test 202 Start 202: plm-convert-dicom-donut-b 202: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd;--xor-contours" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 202: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 202: Test timeout computed to be: 1500 -148: RETVAL: 0 -148: STDOUT: Applying shift=100 and scale=1 ... done. -148: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd -148: Finished! -148: -148: STDERR: -148: Not an error -199: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -199: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd -199: EXPECTED_ERRNO is - 77/578 Test #148: plm-adjust-c .......................... Passed 0.52 sec +202: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +202: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd;--xor-contours +202: EXPECTED_ERRNO is +178: RETVAL: 0 +178: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd +178: +178: STDERR: +172: RETVAL: 0 +172: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd +172: +172: STDERR: +178: Not an error +172: Not an error + 81/578 Test #178: plm-boundary-c ........................ Passed 0.21 sec test 206 Start 206: plm-convert-cxt 206: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-cxt" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 206: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 206: Test timeout computed to be: 1500 -193: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -193: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom/;--output-prefix;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix -193: EXPECTED_ERRNO is -206: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -206: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.txt -206: EXPECTED_ERRNO is -202: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -202: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd;--xor-contours -202: EXPECTED_ERRNO is -145: RETVAL: 0 -145: STDOUT: Applying piece-wise linear transform... -145: done. -145: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd -145: Finished! -145: -145: STDERR: -145: Not an error - 78/578 Test #145: plm-adjust-b .......................... Passed 0.78 sec + 82/578 Test #172: plm-boundary-a ........................ Passed 0.25 sec test 210 Start 210: plm-convert-dose-scale 210: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dose-scale" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha;--dose-scale;77.7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 210: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 210: Test timeout computed to be: 1500 -210: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -210: PARMS is convert;--input-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha;--dose-scale;77.7 -210: EXPECTED_ERRNO is -178: RETVAL: 0 -178: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd -178: -178: STDERR: -178: Not an error - 79/578 Test #178: plm-boundary-c ........................ Passed 0.46 sec +181: RETVAL: 0 +181: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd +181: +181: STDERR: +181: Not an error +169: RETVAL: 0 +169: STDOUT: Applying local intensity matching... +169: Time = 0.000540 seconds +169: Time = 0.000380 seconds +169: Time = 0.000420 seconds +169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd +169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd +169: done. +169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd +169: Finished! +169: +169: STDERR: + 83/578 Test #181: plm-boundary-d ........................ Passed 0.21 sec +169: Not an error test 213 Start 213: plm-crop-a 213: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha;--voxels;5 15 3 18 7 9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 213: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 213: Test timeout computed to be: 1500 -184: RETVAL: 0 -184: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd -184: -184: STDERR: -184: Not an error - 80/578 Test #184: plm-boundary-e ........................ Passed 0.43 sec +206: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +206: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.txt +206: EXPECTED_ERRNO is +163: RETVAL: 0 +163: STDOUT: Computing statistics for linear match... +163: Time = 0.000243 seconds +163: Adjusting image. shift = 0.158838; scale = 0.000442518 done. +163: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd +163: Finished! +163: +163: STDERR: +163: Not an error + 84/578 Test #169: plm-adjust-j .......................... Passed 0.29 sec test 216 Start 216: plm-crop-b 216: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha;--coordinates;-15 10 3 18 -12 -7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 216: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 216: Test timeout computed to be: 1500 -213: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -213: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha;--voxels;5 15 3 18 7 9 -213: EXPECTED_ERRNO is -169: RETVAL: 0 -169: STDOUT: Applying local intensity matching... -169: Time = 0.000760 seconds -169: Time = 0.000513 seconds -169: Time = 0.000523 seconds -169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd -169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd -169: done. -169: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd -169: Finished! -169: -169: STDERR: -169: Not an error -216: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -216: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha;--coordinates;-15 10 3 18 -12 -7 -216: EXPECTED_ERRNO is - 81/578 Test #169: plm-adjust-j .......................... Passed 0.71 sec + 85/578 Test #163: plm-adjust-h .......................... Passed 0.42 sec test 219 Start 219: plm-crop-c 219: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha;--structure;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 219: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 219: Test timeout computed to be: 1500 -102: RETVAL: 0 -102: STDOUT: Rendering DRR 0 -102: I/O time: 0.000312 sec -102: Rendering DRR 1 -102: I/O time: 0.000282 sec -102: Rendering DRR 2 -102: I/O time: 0.000264 sec -102: Rendering DRR 3 -102: I/O time: 0.000270 sec -102: Rendering DRR 4 -102: I/O time: 0.000282 sec -102: Rendering DRR 5 -102: I/O time: 0.000281 sec -102: Rendering DRR 6 -102: I/O time: 0.000240 sec -102: Rendering DRR 7 -102: I/O time: 0.000266 sec -102: Rendering DRR 8 -102: I/O time: 0.000273 sec -102: Rendering DRR 9 -102: I/O time: 0.000271 sec -102: Rendering DRR 10 -102: I/O time: 0.000282 sec -102: Rendering DRR 11 -102: I/O time: 0.000265 sec -102: Rendering DRR 12 -102: I/O time: 0.000276 sec -102: Rendering DRR 13 -102: I/O time: 0.000271 sec -102: Rendering DRR 14 -102: I/O time: 0.000277 sec -102: Rendering DRR 15 -102: I/O time: 0.000269 sec -102: Rendering DRR 16 -102: I/O time: 0.000263 sec -102: Rendering DRR 17 -102: I/O time: 0.000321 sec -102: Rendering DRR 18 -102: I/O time: 0.000289 sec -102: Rendering DRR 19 -102: I/O time: 0.000251 sec -102: Total time: 0.767669 secs -102: -102: STDERR: -102: Not an error -175: RETVAL: 0 -175: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd -175: -175: STDERR: -175: Not an error - 82/578 Test #102: drr-b ................................. Passed 1.28 sec - 83/578 Test #175: plm-boundary-b ........................ Passed 0.57 sec -test 256 - Start 256: plm-fill-a - -256: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fill;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -256: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -256: Test timeout computed to be: 1500 -test 259 - Start 259: plm-mask-a - -259: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -259: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -259: Test timeout computed to be: 1500 -105: RETVAL: 0 -105: STDOUT: Rendering DRR 0 -105: I/O time: 0.000370 sec -105: Rendering DRR 1 -105: I/O time: 0.000457 sec -105: Rendering DRR 2 -105: I/O time: 0.000293 sec -105: Rendering DRR 3 -105: I/O time: 0.000251 sec -105: Rendering DRR 4 -105: I/O time: 0.000299 sec -105: Rendering DRR 5 -105: I/O time: 0.000393 sec -105: Rendering DRR 6 -105: I/O time: 0.000315 sec -105: Rendering DRR 7 -105: I/O time: 0.000319 sec -105: Rendering DRR 8 -105: I/O time: 0.000291 sec -105: Rendering DRR 9 -105: I/O time: 0.000317 sec -105: Rendering DRR 10 -105: I/O time: 0.000312 sec -105: Rendering DRR 11 -105: I/O time: 0.000292 sec -105: Rendering DRR 12 -105: I/O time: 0.000288 sec -105: Rendering DRR 13 -105: I/O time: 0.000268 sec -105: Rendering DRR 14 -105: I/O time: 0.000265 sec -105: Rendering DRR 15 -105: I/O time: 0.000259 sec -105: Rendering DRR 16 -105: I/O time: 0.000253 sec -105: Rendering DRR 17 -105: I/O time: 0.000321 sec -105: Rendering DRR 18 -105: I/O time: 0.000274 sec -105: Rendering DRR 19 -105: I/O time: 0.000277 sec -105: Total time: 0.767877 secs -105: -105: STDERR: -105: Not an error -181: RETVAL: 0 -181: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd -181: -181: STDERR: - 84/578 Test #105: drr-c ................................. Passed 1.28 sec -test 262 - Start 262: plm-gamma-a - -262: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -262: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -262: Test timeout computed to be: 1500 -181: Not an error - 85/578 Test #181: plm-boundary-d ........................ Passed 0.53 sec -test 265 - Start 265: plm-gamma-b - -265: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -265: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -265: Test timeout computed to be: 1500 +210: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +210: PARMS is convert;--input-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-dose-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha;--dose-scale;77.7 +210: EXPECTED_ERRNO is +213: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +213: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha;--voxels;5 15 3 18 7 9 +213: EXPECTED_ERRNO is 219: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 219: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha;--structure;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha 219: EXPECTED_ERRNO is -259: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -259: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000 -259: EXPECTED_ERRNO is -256: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -256: PARMS is fill;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha -256: EXPECTED_ERRNO is +216: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +216: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha;--coordinates;-15 10 3 18 -12 -7 +216: EXPECTED_ERRNO is 190: RETVAL: 0 -190: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502728RTDOSE -190: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502729RTSTRUCT +190: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757252RTDOSE +190: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757253RTSTRUCT 190: Found DCM_ReferencedFrameOfReferenceSequence! 190: Found DCM_RTReferencedStudySequence! 190: Trying to load rt dose. @@ -7990,25 +8084,68 @@ 190: 190: STDERR: 190: Not an error - 86/578 Test #190: plm-convert-dicom-b ................... Passed 0.52 sec -test 272 - Start 272: plm-maximum-a +184: RETVAL: 0 +184: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd +184: +184: STDERR: + 86/578 Test #190: plm-convert-dicom-b ................... Passed 0.22 sec +test 256 + Start 256: plm-fill-a -272: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=maximum;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -272: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -272: Test timeout computed to be: 1500 -262: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -262: PARMS is gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha -262: EXPECTED_ERRNO is -265: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -265: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha -265: EXPECTED_ERRNO is -272: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -272: PARMS is maximum;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -272: EXPECTED_ERRNO is +256: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fill;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +256: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +256: Test timeout computed to be: 1500 +184: Not an error + 87/578 Test #184: plm-boundary-e ........................ Passed 0.24 sec +test 259 + Start 259: plm-mask-a + +259: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +259: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +259: Test timeout computed to be: 1500 +256: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +256: PARMS is fill;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha +256: EXPECTED_ERRNO is +259: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +259: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000 +259: EXPECTED_ERRNO is +108: RETVAL: 0 +108: STDOUT: Reconstructing... +108: Processing image 0 +108: Processing image 1 +108: Processing image 2 +108: Processing image 3 +108: Processing image 4 +108: Processing image 5 +108: Processing image 6 +108: Processing image 7 +108: Processing image 8 +108: Processing image 9 +108: Processing image 10 +108: Processing image 11 +108: Processing image 12 +108: Processing image 13 +108: Processing image 14 +108: Processing image 15 +108: Processing image 16 +108: Processing image 17 +108: Processing image 18 +108: Processing image 19 +108: I/O time (total) = 0.00174022 +108: I/O time (per image) = 8.70109e-05 +108: Filter time = 0 +108: Filter time (per image) = 0 +108: Backprojection time = 0.568983 +108: Backprojection time (per image) = 0.0284492 +108: Writing output volume(s)... +108: done. +108: +108: +108: STDERR: +108: Not an error 199: RETVAL: 0 -199: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55241.1791579442.502924RTDOSE -199: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55241.1791579442.502925RTSTRUCT +199: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385844.1757170007.767247RTDOSE +199: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385844.1757170007.767248RTSTRUCT 199: Found DCM_ReferencedFrameOfReferenceSequence! 199: Found DCM_RTReferencedStudySequence! 199: Trying to load rt dose. @@ -8050,16 +8187,82 @@ 199: 199: STDERR: 199: Not an error - 87/578 Test #199: plm-convert-dicom-donut-a ............. Passed 0.55 sec -test 275 - Start 275: plm-multiply-a + 88/578 Test #108: fdk-cpu-a ............................. Passed 0.83 sec +test 262 + Start 262: plm-gamma-a -275: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -275: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -275: Test timeout computed to be: 1500 +262: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +262: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +262: Test timeout computed to be: 1500 + 89/578 Test #199: plm-convert-dicom-donut-a ............. Passed 0.22 sec +test 265 + Start 265: plm-gamma-b + +265: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +265: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +265: Test timeout computed to be: 1500 +262: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +262: PARMS is gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha +262: EXPECTED_ERRNO is +265: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +265: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha +265: EXPECTED_ERRNO is +219: RETVAL: 0 +219: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha +219: +219: STDERR: +219: Not an error + 90/578 Test #219: plm-crop-c ............................ Passed 0.14 sec +test 272 + Start 272: plm-maximum-a + +272: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=maximum;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +272: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +272: Test timeout computed to be: 1500 +206: RETVAL: 0 +206: STDOUT: CT_SERIES_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.386437.1757170008.199751| +206: CT_STUDY_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.386437.1757170008.199767| +206: CT_FRAME_OF_REFERENCE_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.386437.1757170008.199768| +206: PATIENT_NAME|ANONYMOUS| +206: PATIENT_ID|PL276187073056329| +206: PATIENT_SEX|O| +206: STUDY_ID|10001| +206: OFFSET|-55.2632 -55.2632 -46.0526| +206: DIMENSION|512 512 7| +206: SPACING|0.215872 0.215872 13.1579| +206: ROI_NAMES|| +206: Starting structure parsing +206: Starting contour parsing +206: Setting PIH from structure set spacing +206: PIH is: +206: Origin = -55.2632 -55.2632 -46.0526 +206: Size = 512 512 7 +206: Spacing = 0.2159 0.2159 13.1579 +206: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +206: Rt_study_warp: Convert ss_img to cxt. +206: Rt_study_warp: Apply dicom_dir. +206: Rt_study_warp: Set geometry from PIH. +206: Rt_study_warp: Set rasterization geometry. +206: rast_dim = 512 512 7 +206: rast_offset = -55.2632 -55.2632 -46.0526 +206: rast_spacing = 0.215872 0.215872 13.1579 +206: Rt_study_warp: warp and save ss. +206: Warp_and_save_ss: seg->rasterize +206: Rasterizing... +206: Converting... +206: Finished rasterization. +206: Warp_and_save_ss: save_ss_img +206: save_ss_img: save_ss_image +206: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha +206: save_ss_img: save_ss_list +206: Done. +206: Finished! +206: +206: STDERR: +206: Not an error 202: RETVAL: 0 -202: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55241.1791579442.502924RTDOSE -202: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55241.1791579442.502925RTSTRUCT +202: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385844.1757170007.767247RTDOSE +202: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385844.1757170007.767248RTSTRUCT 202: Found DCM_ReferencedFrameOfReferenceSequence! 202: Found DCM_RTReferencedStudySequence! 202: Trying to load rt dose. @@ -8101,76 +8304,35 @@ 202: 202: STDERR: 202: Not an error - 88/578 Test #202: plm-convert-dicom-donut-b ............. Passed 0.51 sec + 91/578 Test #202: plm-convert-dicom-donut-b ............. Passed 0.23 sec + 92/578 Test #206: plm-convert-cxt ....................... Passed 0.18 sec +test 275 + Start 275: plm-multiply-a + +275: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +275: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +275: Test timeout computed to be: 1500 test 278 Start 278: plm-multiply-vf-a 278: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 278: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 278: Test timeout computed to be: 1500 -206: RETVAL: 0 -206: STDOUT: CT_SERIES_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.55876.1791579443.272169| -206: CT_STUDY_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.55876.1791579443.272185| -206: CT_FRAME_OF_REFERENCE_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.55876.1791579443.272186| -206: PATIENT_NAME|ANONYMOUS| -206: PATIENT_ID|PL648466398389852| -206: PATIENT_SEX|O| -206: STUDY_ID|10001| -206: OFFSET|-55.2632 -55.2632 -46.0526| -206: DIMENSION|512 512 7| -206: SPACING|0.215872 0.215872 13.1579| -206: ROI_NAMES|| -206: Starting structure parsing -206: Starting contour parsing -206: Setting PIH from structure set spacing -206: PIH is: -206: Origin = -55.2632 -55.2632 -46.0526 -206: Size = 512 512 7 -206: Spacing = 0.2159 0.2159 13.1579 -206: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -206: Rt_study_warp: Convert ss_img to cxt. -206: Rt_study_warp: Apply dicom_dir. -206: Rt_study_warp: Set geometry from PIH. -206: Rt_study_warp: Set rasterization geometry. -206: rast_dim = 512 512 7 -206: rast_offset = -55.2632 -55.2632 -46.0526 -206: rast_spacing = 0.215872 0.215872 13.1579 -206: Rt_study_warp: warp and save ss. -206: Warp_and_save_ss: seg->rasterize -206: Rasterizing... -206: Converting... -206: Finished rasterization. -206: Warp_and_save_ss: save_ss_img -206: save_ss_img: save_ss_image -206: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha -206: save_ss_img: save_ss_list -206: Done. -206: Finished! -206: -206: STDERR: -206: Not an error - 89/578 Test #206: plm-convert-cxt ....................... Passed 0.51 sec +213: RETVAL: 0 +213: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha +213: +213: STDERR: +213: Not an error + 93/578 Test #213: plm-crop-a ............................ Passed 0.17 sec test 282 Start 282: plm-reg-align-center 282: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-align-center" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 282: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 282: Test timeout computed to be: 1500 -275: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -275: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -275: EXPECTED_ERRNO is -282: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -282: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center.txt -282: EXPECTED_ERRNO is -278: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -278: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha -278: EXPECTED_ERRNO is -256: RETVAL: 0 -256: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha -256: Finished! -256: -256: STDERR: -256: Not an error +272: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +272: PARMS is maximum;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +272: EXPECTED_ERRNO is 210: RETVAL: 0 210: STDOUT: Setting PIH from DOSE 210: PIH is: @@ -8185,454 +8347,357 @@ 210: 210: STDERR: 210: Not an error - 90/578 Test #256: plm-fill-a ............................ Passed 0.26 sec + 94/578 Test #210: plm-convert-dose-scale ................ Passed 0.20 sec +259: RETVAL: 0 +259: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha +259: Finished! +259: +259: STDERR: test 288 Start 288: plm-reg-itk-rigid-a 288: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 288: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 288: Test timeout computed to be: 1500 - 91/578 Test #210: plm-convert-dose-scale ................ Passed 0.43 sec +259: Not an error +278: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +278: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha +278: EXPECTED_ERRNO is +275: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +275: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +275: EXPECTED_ERRNO is + 95/578 Test #259: plm-mask-a ............................ Passed 0.12 sec test 293 Start 293: plm-reg-itk-similarity 293: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 293: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 293: Test timeout computed to be: 1500 -259: RETVAL: 0 -259: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha -259: Finished! -259: -259: STDERR: -259: Not an error - 92/578 Test #259: plm-mask-a ............................ Passed 0.28 sec +216: RETVAL: 0 +216: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha +216: +216: STDERR: +216: Not an error + 96/578 Test #216: plm-crop-b ............................ Passed 0.18 sec test 298 Start 298: plm-reg-itk-bspline 298: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-bspline" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 298: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 298: Test timeout computed to be: 1500 -213: RETVAL: 0 -213: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha -213: -213: STDERR: -213: Not an error - 93/578 Test #213: plm-crop-a ............................ Passed 0.36 sec +256: RETVAL: 0 +256: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha +256: Finished! +256: +256: STDERR: +256: Not an error + 97/578 Test #256: plm-fill-a ............................ Passed 0.14 sec test 301 Start 301: plm-reg-itk-demons 301: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 301: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 301: Test timeout computed to be: 1500 -293: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -293: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity.txt -293: EXPECTED_ERRNO is -298: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -298: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline.txt -298: EXPECTED_ERRNO is +282: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +282: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center.txt +282: EXPECTED_ERRNO is 288: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 288: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a.txt 288: EXPECTED_ERRNO is -301: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -301: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.txt -301: EXPECTED_ERRNO is -282: RETVAL: 0 -282: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -282: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha -282: Launching registration worker thread -282: Inside registration worker thread -282: Doing registration stage -282: [1] xf_in->m_type = 0, xf_out->m_type = 0 -282: [2] xf_out->m_type = 1, xf_in->m_type = 0 -282: ** Registration worker thread finished. -282: Writing transformation ... -282: Warping... -282: plm_warp_itk: xform_to_itk_vf -282: plm_warp_itk: convert_to_itk -282: plm_warp_itk: warping... -282: Saving image... -282: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha -282: Load: 0.0379939 -282: Run: 0.000364065 -282: Save: 0.00802207 -282: Total: 0.04638 -282: Finished! -282: -282: STDERR: -340: RETVAL: 0 -340: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -340: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha -340: Launching registration worker thread -340: Inside registration worker thread -340: Doing registration stage -340: [1] xf_in->m_type = 0, xf_out->m_type = 0 -340: RESAMPLE 1 1: (1 1 1), (1 1 1) -340: RESAMPLE 1 1: (1 1 1), (1 1 1) -340: volume_calc_grad complete. -340: bspline_xform_initialize -340: rdims = (3,3,3) -340: vox_per_rgn = (15,15,15) -340: cdims = (6 6 6) -340: Algorithm flavor = c -340: Threading = 0 -340: >> Checking JH allocation -340: >> Performing JH allocation -340: BSPLINE PARMS -340: max_its = 10 -340: max_feval = 10 -340: BSPLINE XFORM HEADER -340: vox_per_rgn = 15 15 15 -340: roi_offset = 0 0 0 -340: roi_dim = 38 38 38 -340: img_dc = 1 0 0 0 1 0 0 0 1 -340: BST METRICS -340: MET 110100 MI 1.000000 -340: >> Performing JH initialization -340: Using alpha_0 (1.000000) -340: [ 0, 0] MI -0.3659457 NV 54872 GM -0.007 GN 0.00788 [ 0.172 s ] -340: CMIN 0.01 CAVG 0.01 CMAX 0.01 -340: [ 0, 1] MI -0.3699214 NV 54872 GM -0.056 GN 0.00867 [ 0.135 s ] -340: CMIN -0.21 CAVG 0.01 CMAX 0.30 -340: GR 0.50 NEW_A 1.00 ACCEPT? 1 -340: [ 1, 2] MI -0.3777946 NV 54872 GM -0.049 GN 0.00903 [ 0.139 s ] -340: CMIN -0.23 CAVG 0.02 CMAX 0.69 -340: GR 0.91 NEW_A 3.00 ACCEPT? 1 -340: [ 2, 3] MI -0.4137608 NV 54753 GM -0.063 GN 0.017 [ 0.147 s ] -340: CMIN -0.35 CAVG 0.05 CMAX 2.09 -340: GR 3.98 NEW_A 9.00 ACCEPT? 1 -340: [ 3, 4] MI -0.5521525 NV 53587 GM -0.081 GN 0.017 [ 0.120 s ] -340: CMIN -0.97 CAVG 0.10 CMAX 7.08 -340: GR 8.16 NEW_A 27.00 ACCEPT? 1 -340: [ 4, 5] MI -1.2166027 NV 49761 GM -0.031 GN 0.0276 [ 0.149 s ] -340: CMIN -2.22 CAVG 0.30 CMAX 20.76 -340: GR 38.97 NEW_A 81.00 ACCEPT? 1 -340: [ 5, 6] MI -0.4035923 NV 36457 GM -0.029 GN 0.0114 [ 0.121 s ] -340: CMIN -26.58 CAVG 0.44 CMAX 33.14 -340: GR -29.50 NEW_A 40.50 ACCEPT? 0 -340: [ 5, 7] MI -0.7946788 NV 43303 GM -0.068 GN 0.0215 [ 0.133 s ] -340: CMIN -14.21 CAVG 0.37 CMAX 26.12 -340: GR -15.31 NEW_A 20.25 ACCEPT? 0 -340: [ 5, 8] MI -1.1523657 NV 46825 GM -0.160 GN 0.031 [ 0.148 s ] -340: CMIN -8.02 CAVG 0.33 CMAX 23.44 -340: GR -2.33 NEW_A 10.12 ACCEPT? 0 -340: [ 5, 9] MI -1.3108922 NV 48385 GM -0.176 GN 0.0266 [ 0.128 s ] -340: CMIN -4.93 CAVG 0.31 CMAX 22.10 -340: GR 3.42 NEW_A 30.38 ACCEPT? 1 -340: [ 6, 10] MI -0.7927921 NV 46839 GM 0.149 GN 0.0234 [ 0.116 s ] -340: CMIN -2.23 CAVG 0.62 CMAX 17.80 -340: GR -19.50 NEW_A 15.19 ACCEPT? 0 -340: [2] xf_out->m_type = 9, xf_in->m_type = 0 -340: ** Registration worker thread finished. -340: Writing transformation ... -340: Warping... -340: Running: plm_warp_native -340: Converting input image... -340: Converting xform... -340: bspline_xform_initialize -340: rdims = (3,3,3) -340: vox_per_rgn = (15,15,15) -340: cdims = (6 6 6) -340: Creating output vf... -340: Creating output volume... -340: Running native warper... -340: bspline_warp complete. -340: Back convert to original type... -340: > Convert vf to itk -340: > Conversion complete. -340: plm_warp_native is complete. -340: Saving image... -340: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha -340: Saving vf... -340: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha -340: Load: 0.100253 -340: Run: 1.60285 -340: Save: 0.059768 -340: Total: 1.76287 -340: Finished! -340: -340: STDERR: -282: Not an error -340: Not an error - 94/578 Test #340: plm-bsp-mi-c-2 ........................ Passed 2.10 sec - 95/578 Test #282: plm-reg-align-center .................. Passed 0.21 sec +193: RETVAL: 0 +193: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386032.1757170008.889040RTDOSE +193: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386032.1757170008.889041RTSTRUCT +193: Found DCM_ReferencedFrameOfReferenceSequence! +193: Found DCM_RTReferencedStudySequence! +193: Trying to load rt dose. +193: Load: DoseGridScaling = 0.000000 +193: RTDOSE: dim = 100 100 100 +193: ipp = -247.500000 -247.500000 -247.500000 +193: spc = 5.000000 5.000000 5.000000 +193: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +193: Bits_alloc: 32 +293: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +293: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity.txt +293: EXPECTED_ERRNO is +193: Bits_stored: 32 +193: High_bit: 31 +193: Pixel_rep: 0 +193: rc = 1, length = 2000000, npix = 1000000 +193: Trying to load rt structure set. +193: Adding structure (1), Body +193: Adding structure (2), Tumor +193: Adding structure (3), Lung +193: Structure 1 has color 255\0\0 +193: Structure 2 has color 255\255\0 +193: Structure 3 has color 255\0\255 +193: Setting PIH from RDD +193: PIH is: +193: Origin = -247.5000 -247.5000 -247.5000 +193: Size = 100 100 100 +193: Spacing = 5.0000 5.0000 5.0000 +193: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +193: Rt_study_warp: Convert ss_img to cxt. +193: Rt_study_warp: Apply dicom_dir. +193: Rt_study_warp: Set geometry from PIH. +193: Rt_study_warp: Set rasterization geometry. +193: rast_dim = 512 512 99 +193: rast_offset = -157.5 -157.5 -247.5 +193: rast_spacing = 0.615234 0.615234 5 +193: Rt_study_warp: warp and save ss. +193: Warp_and_save_ss: seg->rasterize +193: Rasterizing... +193: Converting... +193: Finished rasterization. +193: Warp_and_save_ss: save_ss_img +193: save_ss_img: save_prefix +193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Body.mha +193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha +193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Lung.mha +193: Finished! +193: +193: STDERR: +193: Not an error + 98/578 Test #193: plm-convert-dicom-c ................... Passed 0.33 sec test 311 Start 311: plm-bsp-mse-c 311: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 311: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 311: Test timeout computed to be: 1500 +298: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +298: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline.txt +298: EXPECTED_ERRNO is +301: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +301: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.txt +301: EXPECTED_ERRNO is +311: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +311: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c.txt +311: EXPECTED_ERRNO is +265: RETVAL: 0 +265: STDOUT: Gamma dose max is 10.000000 +265: Time = 0.000280 seconds +265: Gamma calculation is under progress... +265: analysis threshold = 1.00 Gy +265: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha +265: Pass rate = 0.000000 % +265: +265: STDERR: +265: Not an error + 99/578 Test #265: plm-gamma-b ........................... Passed 0.13 sec test 314 Start 314: plm-bsp-mse-g 314: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 314: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 314: Test timeout computed to be: 1500 +314: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +314: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g.txt +314: EXPECTED_ERRNO is +262: RETVAL: 0 +262: STDOUT: Gamma dose max is 10.000000 +262: Time = 0.000231 seconds +262: Gamma calculation is under progress... +262: analysis threshold = 1.00 Gy +262: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha +262: Pass rate = 100.000000 % +262: +262: STDERR: +272: RETVAL: 0 +272: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd +272: +272: STDERR: +262: Not an error 278: RETVAL: 0 278: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd 278: 278: STDERR: +272: Not an error 278: Not an error - 96/578 Test #278: plm-multiply-vf-a ..................... Passed 0.25 sec +100/578 Test #262: plm-gamma-a ........................... Passed 0.16 sec test 320 Start 320: plm-bsp-mse-i 320: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 320: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 320: Test timeout computed to be: 1500 -262: RETVAL: 0 -262: STDOUT: Gamma dose max is 10.000000 -262: Time = 0.006377 seconds -262: Gamma calculation is under progress... -262: analysis threshold = 1.00 Gy -262: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha -262: Pass rate = 100.000000 % -262: -262: STDERR: -262: Not an error -311: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -311: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c.txt -311: EXPECTED_ERRNO is -275: RETVAL: 0 -275: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd -275: -275: STDERR: - 97/578 Test #262: plm-gamma-a ........................... Passed 0.35 sec +101/578 Test #272: plm-maximum-a ......................... Passed 0.13 sec +102/578 Test #278: plm-multiply-vf-a ..................... Passed 0.12 sec test 323 Start 323: plm-bsp-mse-k 323: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 323: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 323: Test timeout computed to be: 1500 -275: Not an error -219: RETVAL: 0 -219: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha -219: -219: STDERR: -219: Not an error -216: RETVAL: 0 -216: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha -216: -216: STDERR: -216: Not an error - 98/578 Test #219: plm-crop-c ............................ Passed 0.39 sec - 99/578 Test #275: plm-multiply-a ........................ Passed 0.27 sec test 326 Start 326: plm-bsp-mse-l 326: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-l" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 326: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 326: Test timeout computed to be: 1500 +275: RETVAL: 0 +275: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd +275: +275: STDERR: +275: Not an error +103/578 Test #275: plm-multiply-a ........................ Passed 0.13 sec test 337 Start 337: plm-bsp-mi-c 337: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 337: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 337: Test timeout computed to be: 1500 -314: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -314: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g.txt -314: EXPECTED_ERRNO is -100/578 Test #216: plm-crop-b ............................ Passed 0.44 sec -test 343 - Start 343: plm-bsp-mi-k - -343: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -343: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -343: Test timeout computed to be: 1500 320: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 320: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i.txt 320: EXPECTED_ERRNO is +323: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +323: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k.txt +323: EXPECTED_ERRNO is 326: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 326: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l.txt 326: EXPECTED_ERRNO is +282: RETVAL: 0 +282: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +282: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha +282: Launching registration worker thread +282: Inside registration worker thread +282: Doing registration stage +282: [1] xf_in->m_type = 0, xf_out->m_type = 0 +282: [2] xf_out->m_type = 1, xf_in->m_type = 0 +282: ** Registration worker thread finished. +282: Writing transformation ... +282: Warping... +282: plm_warp_itk: xform_to_itk_vf +282: plm_warp_itk: convert_to_itk +282: plm_warp_itk: warping... +282: Saving image... +282: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha +282: Load: 0.0208969 +282: Run: 0.00067091 +282: Save: 0.00889516 +282: Total: 0.030463 +282: Finished! +282: +282: STDERR: +282: Not an error +104/578 Test #282: plm-reg-align-center .................. Passed 0.15 sec +test 343 + Start 343: plm-bsp-mi-k + +343: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +343: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +343: Test timeout computed to be: 1500 337: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 337: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c.txt 337: EXPECTED_ERRNO is -323: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -323: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k.txt -323: EXPECTED_ERRNO is 343: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 343: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k.txt 343: EXPECTED_ERRNO is -272: RETVAL: 0 -272: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd -272: -272: STDERR: -272: Not an error -108: RETVAL: 0 -108: STDOUT: Reconstructing... -108: Processing image 0 -108: Processing image 1 -108: Processing image 2 -108: Processing image 3 -108: Processing image 4 -108: Processing image 5 -108: Processing image 6 -108: Processing image 7 -108: Processing image 8 -108: Processing image 9 -108: Processing image 10 -108: Processing image 11 -108: Processing image 12 -108: Processing image 13 -108: Processing image 14 -108: Processing image 15 -108: Processing image 16 -108: Processing image 17 -108: Processing image 18 -108: Processing image 19 -108: I/O time (total) = 0.00140214 -108: I/O time (per image) = 7.0107e-05 -108: Filter time = 0 -108: Filter time (per image) = 0 -108: Backprojection time = 0.781061 -108: Backprojection time (per image) = 0.0390531 -108: Writing output volume(s)... -108: done. -108: -108: -108: STDERR: -108: Not an error -101/578 Test #272: plm-maximum-a ......................... Passed 0.41 sec +288: RETVAL: 0 +288: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +288: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +288: Launching registration worker thread +288: Inside registration worker thread +288: Doing registration stage +288: [1] xf_in->m_type = 0, xf_out->m_type = 0 +288: Fixed image for this stage: +288: Dim = 19 19 19 +288: Origin = -236.842 -236.842 -236.842 +288: Spacing = 26.3158 26.3158 26.3158 +288: Direction Cosines = +288: 1 0 0 +288: 0 1 0 +288: 0 0 1 +288: Moving image for this stage: +288: Dim = 19 19 19 +288: Origin = -236.842 -236.842 -236.842 +288: Spacing = 26.3158 26.3158 26.3158 +288: Direction Cosines = +288: 1 0 0 +288: 0 1 0 +288: 0 0 1 +288: Initial Parameters = [0, 0, 0, 0, 0, 0] +288: Starting ITK registration +288: StartEvent: [0, 0, 0, 0, 0, 0] +288: MSE [ 0, 0,10.00] 1339.481 [3.897198997801692e-20, 8.106231711095265e-8, -8.106231711285622e-8, 9.999999999999996, -1.0977325614933176e-14, -1.0949565037149749e-14] +288: :: [0, 0, 0, 0, 0, 0] +288: * +288: MSE [ 1, 1,10.00] 368.982 [3.827842029795983e-18, 1.6278511950071375e-7, -1.6278512055469625e-7, 19.999999999999915, 8.969852836729494e-7, 8.969852834261372e-7] -970.50 +288: :: [3.897198997801692e-20, 8.106231711095265e-8, -8.106231711285622e-8, 9.999999999999996, -1.0977325614933176e-14, -1.0949565037149749e-14] +288: * +288: MSE [ 2, 2, 5.00] 181.733 [-2.5395390729820338e-17, 5.896377564709495e-7, -5.896377772920766e-7, 15.000000000001307, 0.0000033932258790285267, 0.000003393225827117364] -187.25 +288: :: [3.827842029795983e-18, 1.6278511950071375e-7, -1.6278512055469625e-7, 19.999999999999915, 8.969852836729494e-7, 8.969852834261372e-7] +288: * +288: MSE [ 3, 3, 2.50] 183.524 [-2.548783095440059e-17, 8.131742571197798e-7, -8.131742896404684e-7, 17.499999999998433, 0.0000060365370054819906, 0.000006036536834843921] 1.79 (tol) +288: EndEvent: [-2.548783095440059e-17, 8.131742571197798e-7, -8.131742896404684e-7, 17.499999999998433, 0.0000060365370054819906, 0.000006036536834843921] +288: VersorTransformOptimizer: Maximum number of iterations (1) exceeded. +288: ITK registration complete +288: [2] xf_out->m_type = 2, xf_in->m_type = 0 +288: Warping... +288: plm_warp_itk: xform_to_itk_vf +288: plm_warp_itk: convert_to_itk +288: plm_warp_itk: warping... +288: Saving image... +288: Trying to write image to plm-reg-itk-rigid-a-intermediate-img.mha +288: Doing registration stage +288: [1] xf_in->m_type = 2, xf_out->m_type = 0 +288: Fixed image for this stage: +288: Dim = 38 38 38 +288: Origin = -243.421 -243.421 -243.421 +288: Spacing = 13.1579 13.1579 13.1579 +288: Direction Cosines = +288: 1 0 0 +288: 0 1 0 +288: 0 0 1 +288: Moving image for this stage: +288: Dim = 38 38 38 +288: Origin = -243.421 -243.421 -243.421 +288: Spacing = 13.1579 13.1579 13.1579 +288: Direction Cosines = +288: 1 0 0 +288: 0 1 0 +288: 0 0 1 +288: Initial Parameters = [3.827842029795983e-18, 1.6278511950071375e-7, -1.6278512055469625e-7, 19.999999999999915, 8.969852836729494e-7, 8.969852834261372e-7] +288: Starting ITK registration +288: StartEvent: [3.827842029795983e-18, 1.6278511950071375e-7, -1.6278512055469625e-7, 19.999999999999915, 8.969852836729494e-7, 8.969852834261372e-7] +288: MSE [ 0, 0,10.00] 616.559 [7.641510505666441e-16, -0.000003330236049396157, 0.000003330235946356246, 10.000000000052827, -0.000021019174535109482, -0.000021019174435073817] +288: :: [3.827842029795983e-18, 1.6278511950071375e-7, -1.6278512055469625e-7, 19.999999999999915, 8.969852836729494e-7, 8.969852834261372e-7] +288: * +288: MSE [ 1, 1, 5.00] 1335.870 [2.6948605351300004e-16, -0.000001993357671583475, 0.0000019933576412439805, 14.9999999999192, -0.00004672874495744906, -0.00004672874598327628] 719.31 +288: MSE [ 2, 2, 5.00] 909.428 [-6.920557062609716e-17, -9.215023615559147e-7, 9.215023819642115e-7, 19.99999999966778, -0.00001133795319707407, -0.000011337953395452555] -426.44 +288: MSE [ 3, 3, 2.50] 616.561 [9.329844178764703e-16, 0.000004240909185784566, -0.0000042409090779275, 17.500000002328246, 0.0000695605305411851, 0.00006956053211671639] -292.87 +288: MSE [ 4, 4, 1.25] 668.182 [3.689772702068216e-16, 0.0000031399063405953273, -0.0000031399063047102848, 18.75000000156098, 0.00003866989486032743, 0.000038669895742038606] 51.62 +288: EndEvent: [3.689772702068216e-16, 0.0000031399063405953273, -0.0000031399063047102848, 18.75000000156098, 0.00003866989486032743, 0.000038669895742038606] +288: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. +288: ITK registration complete +288: [2] xf_out->m_type = 2, xf_in->m_type = 2 +288: ** Registration worker thread finished. +288: Writing transformation ... +288: Warping... +288: plm_warp_itk: xform_to_itk_vf +288: plm_warp_itk: convert_to_itk +288: plm_warp_itk: warping... +288: Saving image... +288: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha +288: Saving vf... +288: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-vf.mha +288: Load: 0.0218041 +288: Run: 0.0445049 +288: Save: 0.0126052 +288: Total: 0.0789142 +288: Finished! +288: +288: STDERR: +288: Not an error +105/578 Test #288: plm-reg-itk-rigid-a ................... Passed 0.20 sec test 346 Start 346: plm-bsp-gm-k 346: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-gm-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 346: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 346: Test timeout computed to be: 1500 -102/578 Test #108: fdk-cpu-a ............................. Passed 1.24 sec -test 351 - Start 351: plm-bsp-openmp - -351: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-openmp.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -351: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -351: Test timeout computed to be: 1500 346: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 346: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k.txt 346: EXPECTED_ERRNO is -351: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -351: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-openmp.txt -351: EXPECTED_ERRNO is -265: RETVAL: 0 -265: STDOUT: Gamma dose max is 10.000000 -265: Time = 0.000200 seconds -265: Gamma calculation is under progress... -265: analysis threshold = 1.00 Gy -265: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha -265: Pass rate = 0.000000 % -265: -265: STDERR: -265: Not an error -103/578 Test #265: plm-gamma-b ........................... Passed 0.48 sec -test 358 - Start 358: plm-bsp-ushort - -358: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-ushort.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -358: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -358: Test timeout computed to be: 1500 -358: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -358: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-ushort.txt -358: EXPECTED_ERRNO is -193: RETVAL: 0 -193: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55555.1791579443.803909RTDOSE -193: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55555.1791579443.803910RTSTRUCT -193: Found DCM_ReferencedFrameOfReferenceSequence! -193: Found DCM_RTReferencedStudySequence! -193: Trying to load rt dose. -193: Load: DoseGridScaling = 0.000000 -193: RTDOSE: dim = 100 100 100 -193: ipp = -247.500000 -247.500000 -247.500000 -193: spc = 5.000000 5.000000 5.000000 -193: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -193: Bits_alloc: 32 -193: Bits_stored: 32 -193: High_bit: 31 -193: Pixel_rep: 0 -193: rc = 1, length = 2000000, npix = 1000000 -193: Trying to load rt structure set. -193: Adding structure (1), Body -193: Adding structure (2), Tumor -193: Adding structure (3), Lung -193: Structure 1 has color 255\0\0 -193: Structure 2 has color 255\255\0 -193: Structure 3 has color 255\0\255 -193: Setting PIH from RDD -193: PIH is: -193: Origin = -247.5000 -247.5000 -247.5000 -193: Size = 100 100 100 -193: Spacing = 5.0000 5.0000 5.0000 -193: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -193: Rt_study_warp: Convert ss_img to cxt. -193: Rt_study_warp: Apply dicom_dir. -193: Rt_study_warp: Set geometry from PIH. -193: Rt_study_warp: Set rasterization geometry. -193: rast_dim = 512 512 99 -193: rast_offset = -157.5 -157.5 -247.5 -193: rast_spacing = 0.615234 0.615234 5 -193: Rt_study_warp: warp and save ss. -193: Warp_and_save_ss: seg->rasterize -193: Rasterizing... -193: Converting... -193: Finished rasterization. -193: Warp_and_save_ss: save_ss_img -193: save_ss_img: save_prefix -193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Body.mha -193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha -193: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Lung.mha -193: Finished! -193: -193: STDERR: -193: Not an error -104/578 Test #193: plm-convert-dicom-c ................... Passed 1.00 sec -test 361 - Start 361: plm-bsp-double - -361: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -361: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -361: Test timeout computed to be: 1500 -361: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -361: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt -361: EXPECTED_ERRNO is -301: RETVAL: 0 -301: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -301: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -301: Launching registration worker thread -301: Inside registration worker thread -301: Doing registration stage -301: [1] xf_in->m_type = 0, xf_out->m_type = 0 -301: Ready to start registration. -301: MSE [ 0] 18945.891 [ 0.009 secs] -301: MSE [ 1] 9752.760 [ 0.009 secs] -301: MSE [ 2] 3751.365 [ 0.007 secs] -301: MSE [ 3] 960.721 [ 0.008 secs] -301: MSE [ 4] 204.827 [ 0.009 secs] -301: Done with registration. Writing output... -301: Deformation stats (out) -301: VF_MAX = 97.6986 VF_AVG = 31.9237 -301: [2] xf_out->m_type = 8, xf_in->m_type = 0 -301: ** Registration worker thread finished. -301: Warping... -301: plm_warp_itk: xform_to_itk_vf -301: plm_warp_itk: convert_to_itk -301: plm_warp_itk: warping... -301: Saving image... -301: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha -301: Saving vf... -301: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-vf.mha -301: Load: 0.044168 -301: Run: 0.0460179 -301: Save: 0.00279903 -301: Total: 0.0929849 -301: Finished! -301: -301: STDERR: -301: Not an error -105/578 Test #301: plm-reg-itk-demons .................... Passed 0.31 sec -test 365 - Start 365: plm-bsp-char-output - -365: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-char-output.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -365: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -365: Test timeout computed to be: 1500 293: RETVAL: 0 293: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha 293: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha @@ -8722,27 +8787,62 @@ 293: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-a-img.mha 293: Saving vf... 293: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-a-vf.mha -293: Load: 0.024662 -293: Run: 0.0891612 -293: Save: 0.0142589 -293: Total: 0.128082 +293: Load: 0.022903 +293: Run: 0.0586371 +293: Save: 0.0151291 +293: Total: 0.0966692 293: Finished! 293: 293: STDERR: 293: Not an error -106/578 Test #293: plm-reg-itk-similarity ................ Passed 0.36 sec -test 369 - Start 369: plm-bsp-regularize-none +301: RETVAL: 0 +301: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +301: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +301: Launching registration worker thread +301: Inside registration worker thread +301: Doing registration stage +301: [1] xf_in->m_type = 0, xf_out->m_type = 0 +301: Ready to start registration. +301: MSE [ 0] 18945.891 [ 0.015 secs] +301: MSE [ 1] 9752.760 [ 0.012 secs] +301: MSE [ 2] 3751.365 [ 0.011 secs] +301: MSE [ 3] 960.721 [ 0.010 secs] +301: MSE [ 4] 204.827 [ 0.010 secs] +301: Done with registration. Writing output... +301: Deformation stats (out) +301: VF_MAX = 97.6986 VF_AVG = 31.9237 +301: [2] xf_out->m_type = 8, xf_in->m_type = 0 +301: ** Registration worker thread finished. +301: Warping... +301: plm_warp_itk: xform_to_itk_vf +301: plm_warp_itk: convert_to_itk +301: plm_warp_itk: warping... +301: Saving image... +301: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha +301: Saving vf... +301: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-vf.mha +301: Load: 0.019552 +301: Run: 0.061512 +301: Save: 0.00346899 +301: Total: 0.084533 +301: Finished! +301: +301: STDERR: +301: Not an error +106/578 Test #301: plm-reg-itk-demons .................... Passed 0.23 sec +test 351 + Start 351: plm-bsp-openmp -369: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -369: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -369: Test timeout computed to be: 1500 -365: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -365: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-char-output.txt -365: EXPECTED_ERRNO is -369: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -369: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt -369: EXPECTED_ERRNO is +351: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-openmp.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +351: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +351: Test timeout computed to be: 1500 +107/578 Test #293: plm-reg-itk-similarity ................ Passed 0.24 sec +test 358 + Start 358: plm-bsp-ushort + +358: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-ushort.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +358: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +358: Test timeout computed to be: 1500 311: RETVAL: 0 311: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 311: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -8773,7 +8873,7 @@ 311: Setting nmax, mmax = 375 21 311: >>> START 311: This problem is unconstrained. -311: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.006 s ] +311: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.002 s ] 311: CMIN 0.00 CAVG 0.00 CMAX 0.00 311: LSD 0.00 311: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.002 s ] @@ -8782,13 +8882,13 @@ 311: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.006 s ] 311: CMIN -0.35 CAVG 0.05 CMAX 3.40 311: LSD 5.00 -311: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.002 s ] +311: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.001 s ] 311: CMIN -1.48 CAVG 0.20 CMAX 14.26 311: LSD 21.00 -311: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.002 s ] +311: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.001 s ] 311: CMIN -1.74 CAVG 0.44 CMAX 32.50 311: LSD 27.95 -311: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.002 s ] +311: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.001 s ] 311: CMIN -1.73 CAVG 0.34 CMAX 23.99 311: LSD 13.11 311: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -8819,118 +8919,124 @@ 311: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha 311: Saving vf... 311: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-vf.mha -311: Load: 0.043602 -311: Run: 0.031198 -311: Save: 0.078793 -311: Total: 0.153593 +311: Load: 0.0363441 +311: Run: 0.0286288 +311: Save: 0.046489 +311: Total: 0.111462 311: Finished! 311: 311: STDERR: 311: Not an error -107/578 Test #311: plm-bsp-mse-c ......................... Passed 0.47 sec -test 372 - Start 372: plm-bsp-regularize-analytic +108/578 Test #311: plm-bsp-mse-c ......................... Passed 0.23 sec +351: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +351: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-openmp.txt +351: EXPECTED_ERRNO is +test 361 + Start 361: plm-bsp-double -372: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -372: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -372: Test timeout computed to be: 1500 -288: RETVAL: 0 -288: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -288: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -288: Launching registration worker thread -288: Inside registration worker thread -288: Doing registration stage -288: [1] xf_in->m_type = 0, xf_out->m_type = 0 -288: Fixed image for this stage: -288: Dim = 19 19 19 -288: Origin = -236.842 -236.842 -236.842 -288: Spacing = 26.3158 26.3158 26.3158 -288: Direction Cosines = -288: 1 0 0 -288: 0 1 0 -288: 0 0 1 -288: Moving image for this stage: -288: Dim = 19 19 19 -288: Origin = -236.842 -236.842 -236.842 -288: Spacing = 26.3158 26.3158 26.3158 -288: Direction Cosines = -288: 1 0 0 -288: 0 1 0 -288: 0 0 1 -288: Initial Parameters = [0, 0, 0, 0, 0, 0] -288: Starting ITK registration -288: StartEvent: [0, 0, 0, 0, 0, 0] -288: MSE [ 0, 0,10.00] 1339.481 [-8.83142881316728e-20, 8.106231711082574e-8, -8.10623171142522e-8, 9.999999999999996, -1.0985752933188858e-14, -1.0981291411759381e-14] -288: :: [0, 0, 0, 0, 0, 0] -288: * -288: MSE [ 1, 1,10.00] 368.982 [3.806948117319788e-18, 1.6278511950376418e-7, -1.627851205541064e-7, 19.999999999999915, 8.969852837431283e-7, 8.969852833613136e-7] -970.50 -288: :: [-8.83142881316728e-20, 8.106231711082574e-8, -8.10623171142522e-8, 9.999999999999996, -1.0985752933188858e-14, -1.0981291411759381e-14] -288: * -288: MSE [ 2, 2, 5.00] 181.733 [-2.4394789939533113e-17, 5.896377564961179e-7, -5.896377772888847e-7, 15.000000000001307, 0.0000033932258785701527, 0.000003393225829126095] -187.25 -288: :: [3.806948117319788e-18, 1.6278511950376418e-7, -1.627851205541064e-7, 19.999999999999915, 8.969852837431283e-7, 8.969852833613136e-7] -288: * -288: MSE [ 3, 3, 2.50] 183.524 [-3.172738995121846e-17, 8.131742571399627e-7, -8.131742896355897e-7, 17.499999999998433, 0.000006036537005084533, 0.0000060365368348658686] 1.79 (tol) -288: EndEvent: [-3.172738995121846e-17, 8.131742571399627e-7, -8.131742896355897e-7, 17.499999999998433, 0.000006036537005084533, 0.0000060365368348658686] -288: VersorTransformOptimizer: Maximum number of iterations (1) exceeded. -288: ITK registration complete -288: [2] xf_out->m_type = 2, xf_in->m_type = 0 -288: Warping... -288: plm_warp_itk: xform_to_itk_vf -288: plm_warp_itk: convert_to_itk -288: plm_warp_itk: warping... -288: Saving image... -288: Trying to write image to plm-reg-itk-rigid-a-intermediate-img.mha -288: Doing registration stage -288: [1] xf_in->m_type = 2, xf_out->m_type = 0 -288: Fixed image for this stage: -288: Dim = 38 38 38 -288: Origin = -243.421 -243.421 -243.421 -288: Spacing = 13.1579 13.1579 13.1579 -288: Direction Cosines = -288: 1 0 0 -288: 0 1 0 -288: 0 0 1 -288: Moving image for this stage: -288: Dim = 38 38 38 -288: Origin = -243.421 -243.421 -243.421 -288: Spacing = 13.1579 13.1579 13.1579 -288: Direction Cosines = -288: 1 0 0 -288: 0 1 0 -288: 0 0 1 -288: Initial Parameters = [3.806948117319788e-18, 1.6278511950376418e-7, -1.627851205541064e-7, 19.999999999999915, 8.969852837431283e-7, 8.969852833613136e-7] -288: Starting ITK registration -288: StartEvent: [3.806948117319788e-18, 1.6278511950376418e-7, -1.627851205541064e-7, 19.999999999999915, 8.969852837431283e-7, 8.969852833613136e-7] -288: MSE [ 0, 0,10.00] 616.559 [7.913398746951725e-16, -0.0000033302360494413585, 0.0000033302359463408686, 10.000000000052827, -0.000021019174533123363, -0.000021019174444185825] -288: :: [3.806948117319788e-18, 1.6278511950376418e-7, -1.627851205541064e-7, 19.999999999999915, 8.969852837431283e-7, 8.969852833613136e-7] -288: * -288: MSE [ 1, 1, 5.00] 1335.870 [2.5721929847045974e-16, -0.0000019933576716453414, 0.0000019933576412331926, 14.9999999999192, -0.000046728744955830994, -0.00004672874598083169] 719.31 -288: MSE [ 2, 2, 5.00] 909.428 [-6.197578444887854e-17, -9.215023615043547e-7, 9.215023820108519e-7, 19.99999999966778, -0.00001133795319329789, -0.00001133795340055733] -426.44 -288: MSE [ 3, 3, 2.50] 616.561 [6.647054919167728e-16, 0.00000424090918590073, -0.0000042409090780940076, 17.500000002328246, 0.00006956053055609987, 0.00006956053218886358] -292.87 -288: MSE [ 4, 4, 1.25] 668.182 [2.498525952672229e-16, 0.0000031399063409463767, -0.0000031399063049056394, 18.75000000156098, 0.000038669894868935475, 0.00003866989578197982] 51.62 -288: EndEvent: [2.498525952672229e-16, 0.0000031399063409463767, -0.0000031399063049056394, 18.75000000156098, 0.000038669894868935475, 0.00003866989578197982] -288: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. -288: ITK registration complete -288: [2] xf_out->m_type = 2, xf_in->m_type = 2 -288: ** Registration worker thread finished. -288: Writing transformation ... -288: Warping... -288: plm_warp_itk: xform_to_itk_vf -288: plm_warp_itk: convert_to_itk -288: plm_warp_itk: warping... -288: Saving image... -288: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha -288: Saving vf... -288: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-vf.mha -288: Load: 0.0746238 -288: Run: 0.0906842 -288: Save: 0.0361121 -288: Total: 0.20142 -288: Finished! -288: -288: STDERR: -288: Not an error -108/578 Test #288: plm-reg-itk-rigid-a ................... Passed 0.56 sec +361: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +361: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +361: Test timeout computed to be: 1500 +358: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +358: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-ushort.txt +358: EXPECTED_ERRNO is +361: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +361: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt +361: EXPECTED_ERRNO is +323: RETVAL: 0 +323: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +323: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +323: Launching registration worker thread +323: Inside registration worker thread +323: Doing registration stage +323: [1] xf_in->m_type = 0, xf_out->m_type = 0 +323: RESAMPLE 1 1: (2 2 2), (2 2 2) +323: RESAMPLE 1 1: (2 2 2), (2 2 2) +323: volume_calc_grad complete. +323: bspline_xform_initialize +323: rdims = (2,2,2) +323: vox_per_rgn = (11,11,11) +323: cdims = (5 5 5) +323: Algorithm flavor = k +323: Threading = 0 +323: >> Checking JH allocation +323: BSPLINE PARMS +323: max_its = 5 +323: max_feval = 5 +323: BSPLINE XFORM HEADER +323: vox_per_rgn = 11 11 11 +323: roi_offset = 0 0 0 +323: roi_dim = 19 19 19 +323: img_dc = 1 0 0 0 1 0 0 0 1 +323: BST METRICS +323: MET 110100 MSE 1.000000 +323: Setting nmax, mmax = 375 21 +323: >>> START +323: This problem is unconstrained. +323: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.002 s ] +323: CMIN 0.00 CAVG 0.00 CMAX 0.00 +323: LSD 0.00 +323: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.002 s ] +323: CMIN -0.07 CAVG 0.01 CMAX 0.68 +323: LSD 1.00 +323: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.002 s ] +323: CMIN -0.35 CAVG 0.05 CMAX 3.40 +323: LSD 5.00 +323: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.010 s ] +323: CMIN -1.48 CAVG 0.20 CMAX 14.26 +323: LSD 21.00 +323: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.001 s ] +323: CMIN -1.74 CAVG 0.44 CMAX 32.50 +323: LSD 27.95 +323: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.001 s ] +323: CMIN -1.73 CAVG 0.34 CMAX 23.99 +323: LSD 13.11 +323: [2] xf_out->m_type = 9, xf_in->m_type = 0 +323: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +323: bspline_xform_initialize +323: rdims = (2,2,2) +323: vox_per_rgn = (22,22,22) +323: cdims = (5 5 5) +323: ** Registration worker thread finished. +323: Writing transformation ... +323: Warping... +323: Running: plm_warp_native +323: Converting input image... +323: Converting xform... +323: bspline_xform_initialize +323: rdims = (2,2,2) +323: vox_per_rgn = (22,22,22) +323: cdims = (5 5 5) +323: Creating output vf... +323: Creating output volume... +323: Running native warper... +323: bspline_warp complete. +323: Back convert to original type... +323: > Convert vf to itk +323: > Conversion complete. +323: plm_warp_native is complete. +323: Saving image... +323: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha +323: Saving vf... +323: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-vf.mha +323: Load: 0.0352581 +323: Run: 0.0354609 +323: Save: 0.0453012 +323: Total: 0.11602 +323: Finished! +323: +323: STDERR: +323: Not an error +109/578 Test #323: plm-bsp-mse-k ......................... Passed 0.31 sec +test 365 + Start 365: plm-bsp-char-output + +365: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-char-output.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +365: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +365: Test timeout computed to be: 1500 +365: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +365: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-char-output.txt +365: EXPECTED_ERRNO is 326: RETVAL: 0 326: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 326: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -8961,22 +9067,22 @@ 326: Setting nmax, mmax = 375 21 326: >>> START 326: This problem is unconstrained. -326: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.006 s ] +326: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.002 s ] 326: CMIN 0.00 CAVG 0.00 CMAX 0.00 326: LSD 0.00 -326: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.002 s ] +326: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.010 s ] 326: CMIN -0.07 CAVG 0.01 CMAX 0.68 326: LSD 1.00 -326: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.006 s ] +326: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.002 s ] 326: CMIN -0.35 CAVG 0.05 CMAX 3.40 326: LSD 5.00 326: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.002 s ] 326: CMIN -1.48 CAVG 0.20 CMAX 14.26 326: LSD 21.00 -326: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.006 s ] +326: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.002 s ] 326: CMIN -1.74 CAVG 0.44 CMAX 32.50 326: LSD 27.95 -326: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.002 s ] +326: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.006 s ] 326: CMIN -1.73 CAVG 0.34 CMAX 23.99 326: LSD 13.11 326: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -9007,127 +9113,165 @@ 326: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha 326: Saving vf... 326: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-vf.mha -326: Load: 0.042212 -326: Run: 0.0413299 -326: Save: 0.0556409 -326: Total: 0.139183 +326: Load: 0.0665188 +326: Run: 0.046092 +326: Save: 0.0568678 +326: Total: 0.169479 326: Finished! 326: 326: STDERR: -test 375 - Start 375: plm-bsp-regularize-numeric - -375: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -375: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -375: Test timeout computed to be: 1500 326: Not an error +110/578 Test #326: plm-bsp-mse-l ......................... Passed 0.36 sec +test 369 + Start 369: plm-bsp-regularize-none + +369: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +369: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +369: Test timeout computed to be: 1500 +369: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +369: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt +369: EXPECTED_ERRNO is +346: RETVAL: 0 +346: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +346: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha +346: Launching registration worker thread +346: Inside registration worker thread +346: Doing registration stage +346: [1] xf_in->m_type = 0, xf_out->m_type = 0 +346: RESAMPLE 1 1: (2 2 2), (2 2 2) +346: RESAMPLE 1 1: (2 2 2), (2 2 2) +346: volume_calc_grad_mag complete. +346: volume_calc_grad_mag complete. +346: volume_calc_grad complete. +346: bspline_xform_initialize +346: rdims = (5,5,5) +346: vox_per_rgn = (4,4,4) +346: cdims = (8 8 8) +346: Algorithm flavor = k +346: Threading = 0 +346: >> Checking JH allocation +346: BSPLINE PARMS +346: max_its = 20 +346: max_feval = 20 +346: BSPLINE XFORM HEADER +346: vox_per_rgn = 4 4 4 +346: roi_offset = 0 0 0 +346: roi_dim = 19 19 19 +346: img_dc = 1 0 0 0 1 0 0 0 1 +346: BST METRICS +346: MET 110100 GM 1.000000 +346: Setting nmax, mmax = 1536 41 +346: >>> START +346: This problem is unconstrained. +346: [ 0, 0] GM 172.628 NV 6859 GM -29.170 GN 4.3 [ 0.002 s ] +346: CMIN 0.00 CAVG 0.00 CMAX 0.00 +346: LSD 0.00 +346: [ 0, 1] GM 167.918 NV 6859 GM -28.658 GN 4.22 [ 0.005 s ] +346: CMIN -0.13 CAVG 0.00 CMAX 0.22 +346: LSD 1.00 +346: [ 0, 2] GM 149.959 NV 6859 GM -26.618 GN 3.91 [ 0.002 s ] +346: CMIN -0.66 CAVG 0.02 CMAX 1.08 +346: LSD 5.00 +346: [ 0, 3] GM 86.734 NV 6751 GM -21.624 GN 3.16 [ 0.002 s ] +346: CMIN -2.76 CAVG 0.09 CMAX 4.52 +346: LSD 21.00 +346: [ 1, 4] GM 45.340 NV 6066 GM 12.985 GN 2.28 [ 0.001 s ] +346: CMIN -8.79 CAVG 0.42 CMAX 26.13 +346: LSD 77.01 +346: [ 2, 5] GM 7.1179175 NV 6185 GM -1.370 GN 0.385 [ 0.002 s ] +346: CMIN -7.46 CAVG 0.30 CMAX 17.43 +346: LSD 31.38 +346: [ 3, 6] GM 5.8718486 NV 6215 GM -1.061 GN 0.253 [ 0.003 s ] +346: CMIN -7.26 CAVG 0.31 CMAX 16.96 +346: LSD 4.23 +346: [ 4, 7] GM 4.1875200 NV 6252 GM -0.481 GN 0.302 [ 0.002 s ] +346: CMIN -7.17 CAVG 0.33 CMAX 15.50 +346: LSD 8.87 +346: [ 5, 8] GM 2.5404434 NV 6268 GM 0.199 GN 0.327 [ 0.001 s ] +346: CMIN -7.33 CAVG 0.37 CMAX 12.64 +346: LSD 13.58 +346: [ 6, 9] GM 1.5809063 NV 6272 GM 0.253 GN 0.261 [ 0.002 s ] +346: CMIN -7.57 CAVG 0.41 CMAX 16.21 +346: LSD 17.78 +346: [ 7, 10] GM 1.2611113 NV 6186 GM -0.858 GN 0.254 [ 0.001 s ] +346: CMIN -8.47 CAVG 0.41 CMAX 17.69 +346: LSD 6.01 +346: [ 8, 11] GM 0.8998204 NV 6202 GM -0.272 GN 0.0629 [ 0.007 s ] +346: CMIN -8.10 CAVG 0.41 CMAX 16.37 +346: LSD 4.02 +346: [ 9, 12] GM 0.8851209 NV 6200 GM -0.119 GN 0.0425 [ 0.005 s ] +346: CMIN -8.11 CAVG 0.41 CMAX 16.43 +346: LSD 1.40 +346: [10, 13] GM 0.8340189 NV 6185 GM -0.041 GN 0.0494 [ 0.002 s ] +346: CMIN -8.22 CAVG 0.42 CMAX 16.47 +346: LSD 2.71 +346: [11, 14] GM 0.7303342 NV 6158 GM 0.209 GN 0.0438 [ 0.001 s ] +346: CMIN -8.31 CAVG 0.43 CMAX 16.15 +346: LSD 3.16 +346: [12, 15] GM 0.6365445 NV 6149 GM -0.660 GN 0.078 [ 0.001 s ] +346: CMIN -8.30 CAVG 0.43 CMAX 15.18 +346: LSD 6.07 +346: [13, 16] GM 0.5679634 NV 6142 GM 0.051 GN 0.0445 [ 0.001 s ] +346: CMIN -8.24 CAVG 0.45 CMAX 14.83 +346: LSD 4.36 +346: [14, 17] GM 0.4986858 NV 6140 GM 0.219 GN 0.0371 [ 0.001 s ] +346: CMIN -8.07 CAVG 0.45 CMAX 14.65 +346: LSD 3.34 +346: [15, 18] GM 0.4631230 NV 6160 GM 0.148 GN 0.0299 [ 0.001 s ] +346: CMIN -7.80 CAVG 0.46 CMAX 14.76 +346: LSD 4.03 +346: [16, 19] GM 0.4685278 NV 6160 GM 0.115 GN 0.0395 [ 0.003 s ] +346: CMIN -7.51 CAVG 0.46 CMAX 15.22 +346: LSD 3.59 +346: [16, 20] GM 0.4544649 NV 6161 GM 0.152 GN 0.026 [ 0.002 s ] +346: CMIN -7.71 CAVG 0.46 CMAX 14.89 +346: LSD 1.09 +346: [2] xf_out->m_type = 9, xf_in->m_type = 0 +346: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +346: bspline_xform_initialize +346: rdims = (5,5,5) +346: vox_per_rgn = (8,8,8) +346: cdims = (8 8 8) +346: ** Registration worker thread finished. +346: Writing transformation ... +346: Warping... +346: Running: plm_warp_native +346: Converting input image... +346: Converting xform... +346: bspline_xform_initialize +346: rdims = (5,5,5) +346: vox_per_rgn = (8,8,8) +346: cdims = (8 8 8) +346: Creating output vf... +346: Creating output volume... +346: Running native warper... +346: bspline_warp complete. +346: Back convert to original type... +346: > Convert vf to itk +346: > Conversion complete. +346: plm_warp_native is complete. +346: Saving image... +346: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha +346: Saving vf... +346: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-vf.mha +346: Load: 0.0596442 +346: Run: 0.070797 +346: Save: 0.0472801 +346: Total: 0.177721 +346: Finished! +346: +346: STDERR: +346: Not an error +111/578 Test #346: plm-bsp-gm-k .......................... Passed 0.39 sec +test 372 + Start 372: plm-bsp-regularize-analytic + +372: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +372: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +372: Test timeout computed to be: 1500 372: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 372: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic.txt 372: EXPECTED_ERRNO is -109/578 Test #326: plm-bsp-mse-l ......................... Passed 0.46 sec -test 379 - Start 379: plm-bsp-landmark-b - -379: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -379: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -379: Test timeout computed to be: 1500 -375: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -375: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt -375: EXPECTED_ERRNO is -379: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -379: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt -379: EXPECTED_ERRNO is -323: RETVAL: 0 -323: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -323: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -323: Launching registration worker thread -323: Inside registration worker thread -323: Doing registration stage -323: [1] xf_in->m_type = 0, xf_out->m_type = 0 -323: RESAMPLE 1 1: (2 2 2), (2 2 2) -323: RESAMPLE 1 1: (2 2 2), (2 2 2) -323: volume_calc_grad complete. -323: bspline_xform_initialize -323: rdims = (2,2,2) -323: vox_per_rgn = (11,11,11) -323: cdims = (5 5 5) -323: Algorithm flavor = k -323: Threading = 0 -323: >> Checking JH allocation -323: BSPLINE PARMS -323: max_its = 5 -323: max_feval = 5 -323: BSPLINE XFORM HEADER -323: vox_per_rgn = 11 11 11 -323: roi_offset = 0 0 0 -323: roi_dim = 19 19 19 -323: img_dc = 1 0 0 0 1 0 0 0 1 -323: BST METRICS -323: MET 110100 MSE 1.000000 -323: Setting nmax, mmax = 375 21 -323: >>> START -323: This problem is unconstrained. -323: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.024 s ] -323: CMIN 0.00 CAVG 0.00 CMAX 0.00 -323: LSD 0.00 -323: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.002 s ] -323: CMIN -0.07 CAVG 0.01 CMAX 0.68 -323: LSD 1.00 -323: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.012 s ] -323: CMIN -0.35 CAVG 0.05 CMAX 3.40 -323: LSD 5.00 -323: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.002 s ] -323: CMIN -1.48 CAVG 0.20 CMAX 14.26 -323: LSD 21.00 -323: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.001 s ] -323: CMIN -1.74 CAVG 0.44 CMAX 32.50 -323: LSD 27.95 -323: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.025 s ] -323: CMIN -1.73 CAVG 0.34 CMAX 23.99 -323: LSD 13.11 -323: [2] xf_out->m_type = 9, xf_in->m_type = 0 -323: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -323: bspline_xform_initialize -323: rdims = (2,2,2) -323: vox_per_rgn = (22,22,22) -323: cdims = (5 5 5) -323: ** Registration worker thread finished. -323: Writing transformation ... -323: Warping... -323: Running: plm_warp_native -323: Converting input image... -323: Converting xform... -323: bspline_xform_initialize -323: rdims = (2,2,2) -323: vox_per_rgn = (22,22,22) -323: cdims = (5 5 5) -323: Creating output vf... -323: Creating output volume... -323: Running native warper... -323: bspline_warp complete. -323: Back convert to original type... -323: > Convert vf to itk -323: > Conversion complete. -323: plm_warp_native is complete. -323: Saving image... -323: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha -323: Saving vf... -323: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-vf.mha -323: Load: 0.118334 -323: Run: 0.087517 -323: Save: 0.0986879 -323: Total: 0.304539 -323: Finished! -323: -323: STDERR: -323: Not an error -110/578 Test #323: plm-bsp-mse-k ......................... Passed 0.64 sec -test 382 - Start 382: plm-bsp-landmark-c - -382: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -382: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -382: Test timeout computed to be: 1500 337: RETVAL: 0 337: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 337: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha @@ -9160,28 +9304,28 @@ 337: Setting nmax, mmax = 1536 41 337: >>> START 337: This problem is unconstrained. -337: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.009 s ] +337: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.044 s ] 337: CMIN 0.01 CAVG 0.01 CMAX 0.01 337: LSD 0.00 -337: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.007 s ] +337: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.020 s ] 337: CMIN -0.26 CAVG 0.01 CMAX 0.05 337: LSD 1.00 -337: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.006 s ] +337: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.024 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.02 337: LSD 0.18 -337: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.013 s ] +337: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.024 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.01 337: LSD 0.09 -337: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.013 s ] +337: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.020 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 -337: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.017 s ] +337: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.004 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 -337: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.042 s ] +337: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.004 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 -337: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.031 s ] +337: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.024 s ] 337: CMIN -0.03 CAVG 0.01 CMAX 0.04 337: LSD 0.14 337: [ 5, 8] MI -0.4052844 NV 6859 GM -0.024 GN 0.00604 [ 0.004 s ] @@ -9190,7 +9334,7 @@ 337: [ 6, 9] MI -0.4053446 NV 6859 GM -0.069 GN 0.00892 [ 0.004 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.06 337: LSD 0.03 -337: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.004 s ] +337: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.005 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.07 337: LSD 0.05 337: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -9221,21 +9365,21 @@ 337: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha 337: Saving vf... 337: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-vf.mha -337: Load: 0.0265701 -337: Run: 0.229508 -337: Save: 0.11323 -337: Total: 0.369308 +337: Load: 0.0591822 +337: Run: 0.226241 +337: Save: 0.0600781 +337: Total: 0.345501 337: Finished! 337: 337: STDERR: 337: Not an error -111/578 Test #337: plm-bsp-mi-c .......................... Passed 0.65 sec -test 385 - Start 385: plm-bsp-landmark-d +112/578 Test #337: plm-bsp-mi-c .......................... Passed 0.60 sec +test 375 + Start 375: plm-bsp-regularize-numeric -385: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -385: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -385: Test timeout computed to be: 1500 +375: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +375: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +375: Test timeout computed to be: 1500 320: RETVAL: 0 320: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 320: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -9266,7 +9410,7 @@ 320: Setting nmax, mmax = 375 21 320: >>> START 320: This problem is unconstrained. -320: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.062 s ] +320: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.042 s ] 320: CMIN 0.00 CAVG 0.00 CMAX 0.00 320: LSD 0.00 320: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.056 s ] @@ -9275,13 +9419,13 @@ 320: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.056 s ] 320: CMIN -0.35 CAVG 0.05 CMAX 3.40 320: LSD 5.00 -320: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.052 s ] +320: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.044 s ] 320: CMIN -1.48 CAVG 0.20 CMAX 14.26 320: LSD 21.00 -320: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.036 s ] +320: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.052 s ] 320: CMIN -1.74 CAVG 0.44 CMAX 32.50 320: LSD 27.95 -320: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.064 s ] +320: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.048 s ] 320: CMIN -1.73 CAVG 0.34 CMAX 23.99 320: LSD 13.11 320: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -9312,182 +9456,132 @@ 320: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha 320: Saving vf... 320: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-vf.mha -320: Load: 0.042526 -320: Run: 0.351309 -320: Save: 0.040915 -320: Total: 0.43475 +320: Load: 0.0243938 +320: Run: 0.323245 +320: Save: 0.0959001 +320: Total: 0.443539 320: Finished! 320: 320: STDERR: 320: Not an error -112/578 Test #320: plm-bsp-mse-i ......................... Passed 0.73 sec -test 388 - Start 388: plm-bsp-landmark-e - -388: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -388: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -388: Test timeout computed to be: 1500 -385: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -385: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt -385: EXPECTED_ERRNO is -382: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -382: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt -382: EXPECTED_ERRNO is -346: RETVAL: 0 -346: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -346: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha -346: Launching registration worker thread -346: Inside registration worker thread -346: Doing registration stage -346: [1] xf_in->m_type = 0, xf_out->m_type = 0 -346: RESAMPLE 1 1: (2 2 2), (2 2 2) -346: RESAMPLE 1 1: (2 2 2), (2 2 2) -346: volume_calc_grad_mag complete. -346: volume_calc_grad_mag complete. -346: volume_calc_grad complete. -346: bspline_xform_initialize -346: rdims = (5,5,5) -346: vox_per_rgn = (4,4,4) -346: cdims = (8 8 8) -346: Algorithm flavor = k -346: Threading = 0 -346: >> Checking JH allocation -346: BSPLINE PARMS -346: max_its = 20 -346: max_feval = 20 -346: BSPLINE XFORM HEADER -346: vox_per_rgn = 4 4 4 -346: roi_offset = 0 0 0 -346: roi_dim = 19 19 19 -346: img_dc = 1 0 0 0 1 0 0 0 1 -346: BST METRICS -346: MET 110100 GM 1.000000 -346: Setting nmax, mmax = 1536 41 -346: >>> START -346: This problem is unconstrained. -346: [ 0, 0] GM 172.628 NV 6859 GM -29.170 GN 4.3 [ 0.002 s ] -346: CMIN 0.00 CAVG 0.00 CMAX 0.00 -346: LSD 0.00 -346: [ 0, 1] GM 167.918 NV 6859 GM -28.658 GN 4.22 [ 0.002 s ] -346: CMIN -0.13 CAVG 0.00 CMAX 0.22 -346: LSD 1.00 -346: [ 0, 2] GM 149.959 NV 6859 GM -26.618 GN 3.91 [ 0.002 s ] -346: CMIN -0.66 CAVG 0.02 CMAX 1.08 -346: LSD 5.00 -346: [ 0, 3] GM 86.734 NV 6751 GM -21.624 GN 3.16 [ 0.014 s ] -346: CMIN -2.76 CAVG 0.09 CMAX 4.52 -346: LSD 21.00 -346: [ 1, 4] GM 45.340 NV 6066 GM 12.985 GN 2.28 [ 0.002 s ] -346: CMIN -8.79 CAVG 0.42 CMAX 26.13 -346: LSD 77.01 -346: [ 2, 5] GM 7.1179175 NV 6185 GM -1.370 GN 0.385 [ 0.008 s ] -346: CMIN -7.46 CAVG 0.30 CMAX 17.43 -346: LSD 31.38 -346: [ 3, 6] GM 5.8718486 NV 6215 GM -1.061 GN 0.253 [ 0.002 s ] -346: CMIN -7.26 CAVG 0.31 CMAX 16.96 -346: LSD 4.23 -346: [ 4, 7] GM 4.1875200 NV 6252 GM -0.481 GN 0.302 [ 0.002 s ] -346: CMIN -7.17 CAVG 0.33 CMAX 15.50 -346: LSD 8.87 -346: [ 5, 8] GM 2.5404434 NV 6268 GM 0.199 GN 0.327 [ 0.010 s ] -346: CMIN -7.33 CAVG 0.37 CMAX 12.64 -346: LSD 13.58 -346: [ 6, 9] GM 1.5809063 NV 6272 GM 0.253 GN 0.261 [ 0.002 s ] -346: CMIN -7.57 CAVG 0.41 CMAX 16.21 -346: LSD 17.78 -346: [ 7, 10] GM 1.2611113 NV 6186 GM -0.858 GN 0.254 [ 0.010 s ] -346: CMIN -8.47 CAVG 0.41 CMAX 17.69 -346: LSD 6.01 -346: [ 8, 11] GM 0.8998204 NV 6202 GM -0.272 GN 0.0629 [ 0.002 s ] -346: CMIN -8.10 CAVG 0.41 CMAX 16.37 -346: LSD 4.02 -346: [ 9, 12] GM 0.8851209 NV 6200 GM -0.119 GN 0.0425 [ 0.002 s ] -346: CMIN -8.11 CAVG 0.41 CMAX 16.43 -346: LSD 1.40 -346: [10, 13] GM 0.8340189 NV 6185 GM -0.041 GN 0.0494 [ 0.010 s ] -346: CMIN -8.22 CAVG 0.42 CMAX 16.47 -346: LSD 2.71 -346: [11, 14] GM 0.7303342 NV 6158 GM 0.209 GN 0.0438 [ 0.002 s ] -346: CMIN -8.31 CAVG 0.43 CMAX 16.15 -346: LSD 3.16 -346: [12, 15] GM 0.6365445 NV 6149 GM -0.660 GN 0.078 [ 0.006 s ] -346: CMIN -8.30 CAVG 0.43 CMAX 15.18 -346: LSD 6.07 -346: [13, 16] GM 0.5679634 NV 6142 GM 0.051 GN 0.0445 [ 0.014 s ] -346: CMIN -8.24 CAVG 0.45 CMAX 14.83 -346: LSD 4.36 -346: [14, 17] GM 0.4986858 NV 6140 GM 0.219 GN 0.0371 [ 0.002 s ] -346: CMIN -8.07 CAVG 0.45 CMAX 14.65 -346: LSD 3.34 -346: [15, 18] GM 0.4631230 NV 6160 GM 0.148 GN 0.0299 [ 0.014 s ] -346: CMIN -7.80 CAVG 0.46 CMAX 14.76 -346: LSD 4.03 -346: [16, 19] GM 0.4685278 NV 6160 GM 0.115 GN 0.0395 [ 0.002 s ] -346: CMIN -7.51 CAVG 0.46 CMAX 15.22 -346: LSD 3.59 -346: [16, 20] GM 0.4544649 NV 6161 GM 0.152 GN 0.026 [ 0.002 s ] -346: CMIN -7.71 CAVG 0.46 CMAX 14.89 -346: LSD 1.09 -346: [2] xf_out->m_type = 9, xf_in->m_type = 0 -346: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -346: bspline_xform_initialize -346: rdims = (5,5,5) -346: vox_per_rgn = (8,8,8) -346: cdims = (8 8 8) -346: ** Registration worker thread finished. -346: Writing transformation ... -346: Warping... -346: Running: plm_warp_native -346: Converting input image... -346: Converting xform... -346: bspline_xform_initialize -346: rdims = (5,5,5) -346: vox_per_rgn = (8,8,8) -346: cdims = (8 8 8) -346: Creating output vf... -346: Creating output volume... -346: Running native warper... -346: bspline_warp complete. -346: Back convert to original type... -346: > Convert vf to itk -346: > Conversion complete. -346: plm_warp_native is complete. -346: Saving image... -346: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha -346: Saving vf... -346: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-vf.mha -346: Load: 0.116827 -346: Run: 0.170201 -346: Save: 0.084259 -346: Total: 0.371287 -346: Finished! -346: -346: STDERR: -346: Not an error -388: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -388: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt -388: EXPECTED_ERRNO is -113/578 Test #346: plm-bsp-gm-k .......................... Passed 0.71 sec -test 391 - Start 391: plm-bsp-dcos-a +113/578 Test #320: plm-bsp-mse-i ......................... Passed 0.64 sec +test 379 + Start 379: plm-bsp-landmark-b -391: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -391: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -391: Test timeout computed to be: 1500 -358: RETVAL: 0 -358: STDOUT: Loading fixed image [0]: gauss-ushort-1.mha -358: Loading moving image [0]: gauss-ushort-2.mha -358: Launching registration worker thread -358: Inside registration worker thread -358: Doing registration stage -358: [1] xf_in->m_type = 0, xf_out->m_type = 0 -358: RESAMPLE 1 1: (2 2 2), (2 2 2) -358: RESAMPLE 1 1: (2 2 2), (2 2 2) -358: volume_calc_grad complete. -358: bspline_xform_initialize -358: rdims = (2,2,2) -358: vox_per_rgn = (11,11,11) -358: cdims = (5 5 5) +379: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +379: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +379: Test timeout computed to be: 1500 +314: RETVAL: 0 +314: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +314: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +314: Launching registration worker thread +314: Inside registration worker thread +314: Doing registration stage +314: [1] xf_in->m_type = 0, xf_out->m_type = 0 +314: RESAMPLE 1 1: (2 2 2), (2 2 2) +314: RESAMPLE 1 1: (2 2 2), (2 2 2) +314: volume_calc_grad complete. +314: bspline_xform_initialize +314: rdims = (2,2,2) +314: vox_per_rgn = (11,11,11) +314: cdims = (5 5 5) +314: Algorithm flavor = g +314: Threading = 0 +314: >> Checking JH allocation +314: BSPLINE PARMS +314: max_its = 5 +314: max_feval = 5 +314: BSPLINE XFORM HEADER +314: vox_per_rgn = 11 11 11 +314: roi_offset = 0 0 0 +314: roi_dim = 19 19 19 +314: img_dc = 1 0 0 0 1 0 0 0 1 +314: BST METRICS +314: MET 110100 MSE 1.000000 +314: Setting nmax, mmax = 375 21 +314: >>> START +314: This problem is unconstrained. +314: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.067 s ] +314: CMIN 0.00 CAVG 0.00 CMAX 0.00 +314: LSD 0.00 +314: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.064 s ] +314: CMIN -0.07 CAVG 0.01 CMAX 0.68 +314: LSD 1.00 +314: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.032 s ] +314: CMIN -0.35 CAVG 0.05 CMAX 3.40 +314: LSD 5.00 +314: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.044 s ] +314: CMIN -1.48 CAVG 0.20 CMAX 14.26 +314: LSD 21.00 +314: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.044 s ] +314: CMIN -1.74 CAVG 0.44 CMAX 32.50 +314: LSD 27.95 +314: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.044 s ] +314: CMIN -1.73 CAVG 0.34 CMAX 23.99 +314: LSD 13.11 +314: [2] xf_out->m_type = 9, xf_in->m_type = 0 +314: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +314: bspline_xform_initialize +314: rdims = (2,2,2) +314: vox_per_rgn = (22,22,22) +314: cdims = (5 5 5) +314: ** Registration worker thread finished. +314: Writing transformation ... +314: Warping... +314: Running: plm_warp_native +314: Converting input image... +314: Converting xform... +314: bspline_xform_initialize +314: rdims = (2,2,2) +314: vox_per_rgn = (22,22,22) +314: cdims = (5 5 5) +314: Creating output vf... +314: Creating output volume... +314: Running native warper... +314: bspline_warp complete. +314: Back convert to original type... +314: > Convert vf to itk +314: > Conversion complete. +314: plm_warp_native is complete. +314: Saving image... +314: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha +314: Saving vf... +314: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-vf.mha +314: Load: 0.033215 +314: Run: 0.323912 +314: Save: 0.078541 +314: Total: 0.435668 +314: Finished! +314: +314: STDERR: +314: Not an error +114/578 Test #314: plm-bsp-mse-g ......................... Passed 0.68 sec +test 382 + Start 382: plm-bsp-landmark-c + +382: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +382: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +382: Test timeout computed to be: 1500 +375: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +375: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt +375: EXPECTED_ERRNO is +379: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +379: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt +379: EXPECTED_ERRNO is +358: RETVAL: 0 +358: STDOUT: Loading fixed image [0]: gauss-ushort-1.mha +358: Loading moving image [0]: gauss-ushort-2.mha +358: Launching registration worker thread +358: Inside registration worker thread +358: Doing registration stage +358: [1] xf_in->m_type = 0, xf_out->m_type = 0 +358: RESAMPLE 1 1: (2 2 2), (2 2 2) +358: RESAMPLE 1 1: (2 2 2), (2 2 2) +358: volume_calc_grad complete. +358: bspline_xform_initialize +358: rdims = (2,2,2) +358: vox_per_rgn = (11,11,11) +358: cdims = (5 5 5) 358: Algorithm flavor = h 358: Threading = 0 358: >> Checking JH allocation @@ -9504,19 +9598,19 @@ 358: Setting nmax, mmax = 375 21 358: >>> START 358: This problem is unconstrained. -358: [ 0, 0] MSE 18754.957 NV 6859 GM -2979.950 GN 852 [ 0.002 s ] +358: [ 0, 0] MSE 18754.957 NV 6859 GM -2979.950 GN 852 [ 0.001 s ] 358: CMIN 0.00 CAVG 0.00 CMAX 0.00 358: LSD 0.00 -358: [ 0, 1] MSE 17837.379 NV 6859 GM -2882.285 GN 824 [ 0.002 s ] +358: [ 0, 1] MSE 17837.379 NV 6859 GM -2882.285 GN 824 [ 0.001 s ] 358: CMIN -0.07 CAVG 0.01 CMAX 0.68 358: LSD 1.00 -358: [ 0, 2] MSE 14463.688 NV 6858 GM -2822.063 GN 824 [ 0.017 s ] +358: [ 0, 2] MSE 14463.688 NV 6858 GM -2822.063 GN 824 [ 0.001 s ] 358: CMIN -0.35 CAVG 0.05 CMAX 3.40 358: LSD 5.00 358: [ 0, 3] MSE 3828.428 NV 6286 GM -1585.519 GN 459 [ 0.001 s ] 358: CMIN -1.48 CAVG 0.20 CMAX 14.26 358: LSD 21.00 -358: [ 1, 4] MSE 3098.900 NV 5455 GM 1176.149 GN 399 [ 0.009 s ] +358: [ 1, 4] MSE 3098.900 NV 5455 GM 1176.149 GN 399 [ 0.001 s ] 358: CMIN -1.74 CAVG 0.44 CMAX 32.50 358: LSD 27.95 358: [ 2, 5] MSE 281.899 NV 5851 GM 54.406 GN 43.4 [ 0.001 s ] @@ -9550,21 +9644,24 @@ 358: Trying to write image to plm-bsp-ushort-img.mha 358: Saving vf... 358: Trying to write image to plm-bsp-ushort-vf.mha -358: Load: 0.075953 -358: Run: 0.0602548 -358: Save: 0.0947161 -358: Total: 0.230924 +358: Load: 0.101819 +358: Run: 0.0409029 +358: Save: 0.0580699 +358: Total: 0.200792 358: Finished! 358: 358: STDERR: 358: Not an error -114/578 Test #358: plm-bsp-ushort ........................ Passed 0.70 sec -test 394 - Start 394: plm-bsp-dcos-b +115/578 Test #358: plm-bsp-ushort ........................ Passed 0.60 sec +test 385 + Start 385: plm-bsp-landmark-d -394: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -394: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -394: Test timeout computed to be: 1500 +385: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +385: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +385: Test timeout computed to be: 1500 +382: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +382: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt +382: EXPECTED_ERRNO is 343: RETVAL: 0 343: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 343: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha @@ -9597,37 +9694,37 @@ 343: Setting nmax, mmax = 1536 41 343: >>> START 343: This problem is unconstrained. -343: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.028 s ] +343: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.032 s ] 343: CMIN 0.01 CAVG 0.01 CMAX 0.01 343: LSD 0.00 -343: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.025 s ] +343: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.020 s ] 343: CMIN -0.26 CAVG 0.01 CMAX 0.05 343: LSD 1.00 -343: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.040 s ] +343: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.024 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.02 343: LSD 0.18 -343: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.024 s ] +343: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.016 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.01 343: LSD 0.09 -343: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.024 s ] +343: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.022 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 -343: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.016 s ] +343: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.008 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 -343: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.024 s ] +343: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.004 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 -343: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.036 s ] +343: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.032 s ] 343: CMIN -0.03 CAVG 0.01 CMAX 0.04 343: LSD 0.14 343: [ 5, 8] MI -0.4052844 NV 6859 GM -0.024 GN 0.00604 [ 0.004 s ] 343: CMIN -0.03 CAVG 0.01 CMAX 0.05 343: LSD 0.04 -343: [ 6, 9] MI -0.4053446 NV 6859 GM -0.069 GN 0.00892 [ 0.004 s ] +343: [ 6, 9] MI -0.4053446 NV 6859 GM -0.069 GN 0.00892 [ 0.020 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.06 343: LSD 0.03 -343: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.004 s ] +343: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.008 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.07 343: LSD 0.05 343: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -9658,24 +9755,24 @@ 343: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha 343: Saving vf... 343: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-vf.mha -343: Load: 0.044301 -343: Run: 0.344477 -343: Save: 0.129158 -343: Total: 0.517936 +343: Load: 0.15377 +343: Run: 0.237607 +343: Save: 0.0763559 +343: Total: 0.467733 343: Finished! 343: 343: STDERR: 343: Not an error -115/578 Test #343: plm-bsp-mi-k .......................... Passed 0.81 sec -test 397 - Start 397: plm-bsp-dcos-c +116/578 Test #343: plm-bsp-mi-k .......................... Passed 0.74 sec +test 388 + Start 388: plm-bsp-landmark-e -397: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -397: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -397: Test timeout computed to be: 1500 -391: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -391: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt -391: EXPECTED_ERRNO is +388: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +388: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +388: Test timeout computed to be: 1500 +385: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +385: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt +385: EXPECTED_ERRNO is 361: RETVAL: 0 361: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha 361: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha @@ -9706,16 +9803,16 @@ 361: Setting nmax, mmax = 375 21 361: >>> START 361: This problem is unconstrained. -361: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.010 s ] +361: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.021 s ] 361: CMIN 0.00 CAVG 0.00 CMAX 0.00 361: LSD 0.00 -361: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.006 s ] +361: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.001 s ] 361: CMIN -0.07 CAVG 0.01 CMAX 0.68 361: LSD 1.00 361: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.001 s ] 361: CMIN -0.35 CAVG 0.05 CMAX 3.40 361: LSD 5.00 -361: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.001 s ] +361: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.013 s ] 361: CMIN -1.48 CAVG 0.20 CMAX 14.26 361: LSD 21.00 361: [ 1, 4] MSE 3098.536 NV 5455 GM 1176.092 GN 399 [ 0.001 s ] @@ -9752,121 +9849,21 @@ 361: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha 361: Saving vf... 361: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-vf.mha -361: Load: 0.102037 -361: Run: 0.072577 -361: Save: 0.0988839 -361: Total: 0.273498 +361: Load: 0.125829 +361: Run: 0.08002 +361: Save: 0.0633671 +361: Total: 0.269216 361: Finished! 361: 361: STDERR: 361: Not an error -116/578 Test #361: plm-bsp-double ........................ Passed 0.70 sec -test 400 - Start 400: plm-bsp-dcos-d - -400: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -400: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -400: Test timeout computed to be: 1500 -394: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -394: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt -394: EXPECTED_ERRNO is -314: RETVAL: 0 -314: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -314: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -314: Launching registration worker thread -314: Inside registration worker thread -314: Doing registration stage -314: [1] xf_in->m_type = 0, xf_out->m_type = 0 -314: RESAMPLE 1 1: (2 2 2), (2 2 2) -314: RESAMPLE 1 1: (2 2 2), (2 2 2) -314: volume_calc_grad complete. -314: bspline_xform_initialize -314: rdims = (2,2,2) -314: vox_per_rgn = (11,11,11) -314: cdims = (5 5 5) -314: Algorithm flavor = g -314: Threading = 0 -314: >> Checking JH allocation -314: BSPLINE PARMS -314: max_its = 5 -314: max_feval = 5 -314: BSPLINE XFORM HEADER -314: vox_per_rgn = 11 11 11 -314: roi_offset = 0 0 0 -314: roi_dim = 19 19 19 -314: img_dc = 1 0 0 0 1 0 0 0 1 -314: BST METRICS -314: MET 110100 MSE 1.000000 -314: Setting nmax, mmax = 375 21 -314: >>> START -314: This problem is unconstrained. -314: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.064 s ] -314: CMIN 0.00 CAVG 0.00 CMAX 0.00 -314: LSD 0.00 -314: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.052 s ] -314: CMIN -0.07 CAVG 0.01 CMAX 0.68 -314: LSD 1.00 -314: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.064 s ] -314: CMIN -0.35 CAVG 0.05 CMAX 3.40 -314: LSD 5.00 -314: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.062 s ] -314: CMIN -1.48 CAVG 0.20 CMAX 14.26 -314: LSD 21.00 -314: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.054 s ] -314: CMIN -1.74 CAVG 0.44 CMAX 32.50 -314: LSD 27.95 -314: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.080 s ] -314: CMIN -1.73 CAVG 0.34 CMAX 23.99 -314: LSD 13.11 -314: [2] xf_out->m_type = 9, xf_in->m_type = 0 -314: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -314: bspline_xform_initialize -314: rdims = (2,2,2) -314: vox_per_rgn = (22,22,22) -314: cdims = (5 5 5) -314: ** Registration worker thread finished. -314: Writing transformation ... -314: Warping... -314: Running: plm_warp_native -314: Converting input image... -314: Converting xform... -314: bspline_xform_initialize -314: rdims = (2,2,2) -314: vox_per_rgn = (22,22,22) -314: cdims = (5 5 5) -314: Creating output vf... -314: Creating output volume... -314: Running native warper... -314: bspline_warp complete. -314: Back convert to original type... -314: > Convert vf to itk -314: > Conversion complete. -314: plm_warp_native is complete. -314: Saving image... -314: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha -314: Saving vf... -314: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-vf.mha -314: Load: 0.0949531 -314: Run: 0.41972 -314: Save: 0.0769839 -314: Total: 0.591657 -314: Finished! -314: -314: STDERR: -314: Not an error -117/578 Test #314: plm-bsp-mse-g ......................... Passed 0.95 sec -test 403 - Start 403: plm-bsp-dcos-e +117/578 Test #361: plm-bsp-double ........................ Passed 0.65 sec +test 391 + Start 391: plm-bsp-dcos-a -403: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -403: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -403: Test timeout computed to be: 1500 -397: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -397: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt -397: EXPECTED_ERRNO is -400: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -400: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt -400: EXPECTED_ERRNO is +391: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +391: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +391: Test timeout computed to be: 1500 365: RETVAL: 0 365: STDOUT: Loading fixed image [0]: rect-2.mha 365: Loading moving image [0]: rect-3.mha @@ -9906,7 +9903,7 @@ 365: [ 0, 1] MSE 1311.345 NV 6859 GM 83.820 GN 22.8 [ 0.018 s ] 365: CMIN -0.60 CAVG -0.00 CMAX 0.08 365: LSD 1.00 -365: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.002 s ] +365: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.001 s ] 365: CMIN -2.99 CAVG -0.01 CMAX 0.42 365: LSD 5.00 365: [ 0, 3] MSE 827.300 NV 6859 GM 63.686 GN 17.5 [ 0.001 s ] @@ -9915,7 +9912,7 @@ 365: [ 1, 4] MSE 213.043 NV 6859 GM -16.873 GN 5.84 [ 0.017 s ] 365: CMIN -54.37 CAVG -0.20 CMAX 6.52 365: LSD 67.10 -365: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.014 s ] +365: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.001 s ] 365: CMIN -51.91 CAVG -0.18 CMAX 5.91 365: LSD 13.48 365: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -9940,27 +9937,30 @@ 365: plm_warp_native is complete. 365: Saving image... 365: Trying to write image to plm-bsp-char-output.mha -365: Load: 0.128265 -365: Run: 0.0916469 -365: Save: 0.0573761 -365: Total: 0.277288 +365: Load: 0.0661211 +365: Run: 0.058347 +365: Save: 0.056669 +365: Total: 0.181137 365: Finished! 365: 365: STDERR: 365: Not an error -118/578 Test #365: plm-bsp-char-output ................... Passed 0.72 sec -test 406 - Start 406: plm-bsp-dcos-f +118/578 Test #365: plm-bsp-char-output ................... Passed 0.50 sec +test 394 + Start 394: plm-bsp-dcos-b -406: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -406: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -406: Test timeout computed to be: 1500 -403: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -403: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt -403: EXPECTED_ERRNO is -406: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -406: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt -406: EXPECTED_ERRNO is +394: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +394: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +394: Test timeout computed to be: 1500 +391: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +391: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt +391: EXPECTED_ERRNO is +388: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +388: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt +388: EXPECTED_ERRNO is +394: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +394: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt +394: EXPECTED_ERRNO is 351: RETVAL: 0 351: STDOUT: Loading fixed image [0]: gauss-1.mha 351: Loading moving image [0]: gauss-2.mha @@ -9991,22 +9991,22 @@ 351: Setting nmax, mmax = 375 21 351: >>> START 351: This problem is unconstrained. -351: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.078 s ] +351: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.036 s ] 351: CMIN 0.00 CAVG 0.00 CMAX 0.00 351: LSD 0.00 -351: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.073 s ] +351: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.064 s ] 351: CMIN -0.07 CAVG 0.01 CMAX 0.68 351: LSD 1.00 -351: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.046 s ] +351: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.029 s ] 351: CMIN -0.35 CAVG 0.05 CMAX 3.40 351: LSD 5.00 -351: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.061 s ] +351: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.023 s ] 351: CMIN -1.48 CAVG 0.20 CMAX 14.26 351: LSD 21.00 -351: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.024 s ] +351: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.053 s ] 351: CMIN -1.74 CAVG 0.44 CMAX 32.50 351: LSD 27.95 -351: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.057 s ] +351: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.043 s ] 351: CMIN -1.73 CAVG 0.34 CMAX 23.99 351: LSD 13.11 351: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -10037,24 +10037,24 @@ 351: Trying to write image to plm-bsp-openmp-img.mha 351: Saving vf... 351: Trying to write image to plm-bsp-openmp-vf.mha -351: Load: 0.162488 -351: Run: 0.377429 -351: Save: 0.0730939 -351: Total: 0.613011 +351: Load: 0.0629621 +351: Run: 0.292953 +351: Save: 0.0539629 +351: Total: 0.409878 351: Finished! 351: 351: STDERR: 351: Not an error -119/578 Test #351: plm-bsp-openmp ........................ Passed 1.06 sec -test 409 - Start 409: plm-reg-multi-a +119/578 Test #351: plm-bsp-openmp ........................ Passed 0.73 sec +test 397 + Start 397: plm-bsp-dcos-c -409: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -409: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -409: Test timeout computed to be: 1500 -409: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -409: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt -409: EXPECTED_ERRNO is +397: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +397: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +397: Test timeout computed to be: 1500 +397: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +397: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt +397: EXPECTED_ERRNO is 369: RETVAL: 0 369: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 369: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha @@ -10088,22 +10088,22 @@ 369: Setting nmax, mmax = 6591 83 369: >>> START 369: This problem is unconstrained. -369: [ 0, 0] MSE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.078 s ] +369: [ 0, 0] MSE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.031 s ] 369: CMIN 0.00 CAVG 0.00 CMAX 0.00 369: LSD 0.00 -369: [ 0, 1] MSE 5484.124 NV 54872 GM 0.045 GN 27.8 [ 0.048 s ] +369: [ 0, 1] MSE 5484.124 NV 54872 GM 0.045 GN 27.8 [ 0.044 s ] 369: CMIN -0.16 CAVG -0.00 CMAX 0.22 369: LSD 1.00 -369: [ 0, 2] MSE 5266.236 NV 54872 GM 0.224 GN 26.4 [ 0.048 s ] +369: [ 0, 2] MSE 5266.236 NV 54872 GM 0.224 GN 26.4 [ 0.024 s ] 369: CMIN -0.81 CAVG 0.00 CMAX 1.12 369: LSD 5.00 -369: [ 0, 3] MSE 4484.536 NV 54872 GM 0.928 GN 20.9 [ 0.062 s ] +369: [ 0, 3] MSE 4484.536 NV 54872 GM 0.928 GN 20.9 [ 0.021 s ] 369: CMIN -3.39 CAVG 0.00 CMAX 4.70 369: LSD 21.00 -369: [ 1, 4] MSE 2493.238 NV 54872 GM 0.677 GN 15.1 [ 0.035 s ] +369: [ 1, 4] MSE 2493.238 NV 54872 GM 0.677 GN 15.1 [ 0.047 s ] 369: CMIN -13.49 CAVG -0.00 CMAX 18.05 369: LSD 60.54 -369: [ 2, 5] MSE 4765.919 NV 54872 GM 81.679 GN 34.3 [ 0.052 s ] +369: [ 2, 5] MSE 4765.919 NV 54872 GM 81.679 GN 34.3 [ 0.048 s ] 369: CMIN -43.65 CAVG -0.01 CMAX 57.84 369: LSD 218.24 369: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -10129,144 +10129,128 @@ 369: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-img.mha 369: Saving vf... 369: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha -369: Load: 0.128254 -369: Run: 0.335634 -369: Save: 0.060317 -369: Total: 0.524205 +369: Load: 0.0452449 +369: Run: 0.220824 +369: Save: 0.0580931 +369: Total: 0.324162 369: Finished! 369: 369: STDERR: 369: Not an error -120/578 Test #369: plm-bsp-regularize-none ............... Passed 1.06 sec -test 412 - Start 412: plm-reg-multi-b +120/578 Test #369: plm-bsp-regularize-none ............... Passed 0.84 sec +test 400 + Start 400: plm-bsp-dcos-d -412: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -412: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -412: Test timeout computed to be: 1500 -379: RETVAL: 0 -379: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha -379: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha -379: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv -379: Loading moving landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv -379: Launching registration worker thread -379: Inside registration worker thread -379: Doing registration stage -379: [1] xf_in->m_type = 0, xf_out->m_type = 0 -379: RESAMPLE 1 1: (2 2 2), (2 2 2) -379: RESAMPLE 1 1: (2 2 2), (2 2 2) -379: volume_calc_grad complete. -379: bspline_xform_initialize -379: Warning: vox_per_rgn was less than 4. -379: Warning: vox_per_rgn was less than 4. -379: Warning: vox_per_rgn was less than 4. -379: rdims = (5,5,5) -379: vox_per_rgn = (4,4,4) -379: cdims = (8 8 8) -379: Algorithm flavor = h -379: Threading = 0 -379: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 -379: >> Checking JH allocation -379: Computing landmark grid coordinates -379: image dc=-1 0 0 0 -1 0 0 0 1 -379: image or=250 250 -236.842 -379: image dm=19 19 19 -379: [0], (-51.7821 -52.1629 46.0528) -> (11.467712 11.482183 10.750000) -379: [1], (52.5439 -52.1629 46.053) -> (7.503327 11.482183 10.750008) -379: [2], (53.3054 53.6862 46.053) -> (7.474390 7.459919 10.750008) -379: [3], (-52.5436 52.9247 46.053) -> (11.496650 7.488857 10.750008) -379: [4], (-52.5436 -52.1629 -46.0525) -> (11.496650 11.482183 7.250000) -379: [5], (53.3054 -51.7821 -46.053) -> (7.474390 11.467712 7.249981) -379: [6], (52.1632 53.3054 -46.053) -> (7.517794 7.474390 7.249981) -379: [7], (-52.9244 53.3054 -46.053) -> (11.511120 7.474390 7.249981) -379: BSPLINE PARMS -379: max_its = 5 -379: max_feval = 5 -379: BSPLINE XFORM HEADER -379: vox_per_rgn = 4 4 4 -379: roi_offset = 0 0 0 -379: roi_dim = 19 19 19 -379: img_dc = -1 0 0 0 -1 0 0 0 1 -379: BST METRICS -379: MET 110100 MSE 1.000000 -379: Setting nmax, mmax = 1536 41 -379: >>> START -379: This problem is unconstrained. -379: [ 0, 0] SCORE 1785.722 NV 6859 GM -104.585 GN 27.6 [ 0.002 s ] -379: MSE 1339.480 LM 446.242 -379: CMIN 0.00 CAVG 0.00 CMAX 0.00 -379: LSD 0.00 -379: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.001 s ] -379: MSE 1303.402 LM 437.384 -379: CMIN -0.03 CAVG 0.00 CMAX 0.57 -379: LSD 1.00 -379: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.014 s ] -379: MSE 1164.662 LM 402.938 -379: CMIN -0.17 CAVG 0.01 CMAX 2.86 -379: LSD 5.00 -379: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.001 s ] -379: MSE 698.326 LM 280.914 -379: CMIN -0.71 CAVG 0.05 CMAX 12.03 -379: LSD 21.00 -379: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.006 s ] -379: MSE 81.402 LM 37.433 -379: CMIN -1.76 CAVG 0.19 CMAX 39.56 -379: LSD 55.80 -379: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.001 s ] -379: MSE 47.343 LM 22.393 -379: CMIN -3.07 CAVG 0.19 CMAX 44.32 -379: LSD 10.82 -379: [2] xf_out->m_type = 9, xf_in->m_type = 0 -379: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -379: bspline_xform_initialize -379: rdims = (5,5,5) -379: vox_per_rgn = (8,8,8) -379: cdims = (8 8 8) -379: ** Registration worker thread finished. -379: Writing transformation ... -379: Warping... -379: Running: plm_warp_native -379: Converting input image... -379: Converting xform... -379: bspline_xform_initialize -379: rdims = (5,5,5) -379: vox_per_rgn = (8,8,8) -379: cdims = (8 8 8) -379: Creating output vf... -379: Creating output volume... -379: Running native warper... -379: bspline_warp complete. -379: Back convert to original type... -379: > Convert vf to itk -379: > Conversion complete. -379: plm_warp_native is complete. -379: Saving image... -379: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha -379: Saving warped landmarks... -379: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-warped.fcsv -379: Saving vf... -379: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-vf.mha -379: Load: 0.13604 -379: Run: 0.0447919 -379: Save: 0.0854239 -379: Total: 0.266256 -379: Finished! -379: -379: STDERR: -379: Not an error -121/578 Test #379: plm-bsp-landmark-b .................... Passed 0.89 sec -test 415 - Start 415: plm-reg-dv-itk-translation +400: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +400: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +400: Test timeout computed to be: 1500 +388: RETVAL: 0 +388: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha +388: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha +388: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.txt +388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.txt +388: Loading moving landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.txt +388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.txt +388: Launching registration worker thread +388: Inside registration worker thread +388: Doing registration stage +388: [1] xf_in->m_type = 0, xf_out->m_type = 0 +388: RESAMPLE 1 1: (2 2 2), (2 2 2) +388: RESAMPLE 1 1: (2 2 2), (2 2 2) +388: volume_calc_grad complete. +388: bspline_xform_initialize +388: Warning: vox_per_rgn was less than 4. +388: Warning: vox_per_rgn was less than 4. +388: Warning: vox_per_rgn was less than 4. +388: rdims = (5,5,5) +388: vox_per_rgn = (4,4,4) +388: cdims = (8 8 8) +388: Algorithm flavor = h +388: Threading = 0 +388: Landmarks: 0 fixed, 0 moving, lambda = 1.000000 +388: >> Checking JH allocation +388: BSPLINE PARMS +388: max_its = 5 +388: max_feval = 5 +388: BSPLINE XFORM HEADER +388: vox_per_rgn = 4 4 4 +388: roi_offset = 0 0 0 +388: roi_dim = 19 19 19 +388: img_dc = -1 0 0 0 -1 0 0 0 1 +388: BST METRICS +388: MET 110100 MSE 1.000000 +388: Setting nmax, mmax = 1536 41 +388: >>> START +388: This problem is unconstrained. +388: [ 0, 0] MSE 1339.480 NV 6859 GM -84.834 GN 23.2 [ 0.002 s ] +388: CMIN 0.00 CAVG 0.00 CMAX 0.00 +388: LSD 0.00 +388: [ 0, 1] MSE 1303.294 NV 6859 GM -83.620 GN 22.8 [ 0.022 s ] +388: CMIN -0.04 CAVG 0.00 CMAX 0.59 +388: LSD 1.00 +388: [ 0, 2] MSE 1164.232 NV 6859 GM -78.768 GN 21.5 [ 0.001 s ] +388: CMIN -0.19 CAVG 0.01 CMAX 2.96 +388: LSD 5.00 +388: [ 0, 3] MSE 698.336 NV 6859 GM -59.420 GN 16.2 [ 0.001 s ] +388: CMIN -0.80 CAVG 0.05 CMAX 12.42 +388: LSD 21.00 +388: [ 1, 4] MSE 89.012 NV 6859 GM 0.171 GN 3.29 [ 0.012 s ] +388: CMIN -2.05 CAVG 0.17 CMAX 39.56 +388: LSD 52.33 +388: [ 2, 5] MSE 51.991 NV 6859 GM 2.502 GN 2.38 [ 0.005 s ] +388: CMIN -3.69 CAVG 0.18 CMAX 41.73 +388: LSD 11.03 +388: [2] xf_out->m_type = 9, xf_in->m_type = 0 +388: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +388: bspline_xform_initialize +388: rdims = (5,5,5) +388: vox_per_rgn = (8,8,8) +388: cdims = (8 8 8) +388: ** Registration worker thread finished. +388: Writing transformation ... +388: Warping... +388: Running: plm_warp_native +388: Converting input image... +388: Converting xform... +388: bspline_xform_initialize +388: rdims = (5,5,5) +388: vox_per_rgn = (8,8,8) +388: cdims = (8 8 8) +388: Creating output vf... +388: Creating output volume... +388: Running native warper... +388: bspline_warp complete. +388: Back convert to original type... +388: > Convert vf to itk +388: > Conversion complete. +388: plm_warp_native is complete. +388: Saving image... +388: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha +388: Saving warped landmarks... +388: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-warped.fcsv +388: Saving vf... +388: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-vf.mha +388: Load: 0.0231762 +388: Run: 0.0634251 +388: Save: 0.054642 +388: Total: 0.141243 +388: Finished! +388: +388: STDERR: +388: Not an error +121/578 Test #388: plm-bsp-landmark-e .................... Passed 0.51 sec +test 403 + Start 403: plm-bsp-dcos-e -415: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -415: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -415: Test timeout computed to be: 1500 -412: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -412: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt -412: EXPECTED_ERRNO is -415: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -415: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt -415: EXPECTED_ERRNO is +403: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +403: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +403: Test timeout computed to be: 1500 +400: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +400: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt +400: EXPECTED_ERRNO is +403: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +403: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt +403: EXPECTED_ERRNO is 382: RETVAL: 0 382: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 382: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha @@ -10319,11 +10303,11 @@ 382: MSE 1339.480 LM 446.242 382: CMIN 0.00 CAVG 0.00 CMAX 0.00 382: LSD 0.00 -382: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.001 s ] +382: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.018 s ] 382: MSE 1303.402 LM 437.384 382: CMIN -0.03 CAVG 0.00 CMAX 0.57 382: LSD 1.00 -382: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.008 s ] +382: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.001 s ] 382: MSE 1164.662 LM 402.938 382: CMIN -0.17 CAVG 0.01 CMAX 2.86 382: LSD 5.00 @@ -10331,7 +10315,7 @@ 382: MSE 698.326 LM 280.914 382: CMIN -0.71 CAVG 0.05 CMAX 12.03 382: LSD 21.00 -382: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.002 s ] +382: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.001 s ] 382: MSE 81.402 LM 37.433 382: CMIN -1.76 CAVG 0.19 CMAX 39.56 382: LSD 55.80 @@ -10384,202 +10368,211 @@ 382: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha 382: Saving vf... 382: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-vf.mha -382: Load: 0.0661459 -382: Run: 0.145595 -382: Save: 0.0397329 -382: Total: 0.251474 +382: Load: 0.055479 +382: Run: 0.182047 +382: Save: 0.0624342 +382: Total: 0.29996 382: Finished! 382: 382: STDERR: 382: Not an error -122/578 Test #382: plm-bsp-landmark-c .................... Passed 0.94 sec -test 424 - Start 424: plm-reg-process-a +122/578 Test #382: plm-bsp-landmark-c .................... Passed 0.68 sec +379: RETVAL: 0 +379: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha +379: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha +379: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv +379: Loading moving landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv +379: Launching registration worker thread +379: Inside registration worker thread +379: Doing registration stage +379: [1] xf_in->m_type = 0, xf_out->m_type = 0 +379: RESAMPLE 1 1: (2 2 2), (2 2 2) +379: RESAMPLE 1 1: (2 2 2), (2 2 2) +379: volume_calc_grad complete. +379: bspline_xform_initialize +379: Warning: vox_per_rgn was less than 4. +379: Warning: vox_per_rgn was less than 4. +379: Warning: vox_per_rgn was less than 4. +379: rdims = (5,5,5) +379: vox_per_rgn = (4,4,4) +379: cdims = (8 8 8) +379: Algorithm flavor = h +379: Threading = 0 +379: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 +379: >> Checking JH allocation +379: Computing landmark grid coordinates +379: image dc=-1 0 0 0 -1 0 0 0 1 +379: image or=250 250 -236.842 +379: image dm=19 19 19 +379: [0], (-51.7821 -52.1629 46.0528) -> (11.467712 11.482183 10.750000) +379: [1], (52.5439 -52.1629 46.053) -> (7.503327 11.482183 10.750008) +379: [2], (53.3054 53.6862 46.053) -> (7.474390 7.459919 10.750008) +379: [3], (-52.5436 52.9247 46.053) -> (11.496650 7.488857 10.750008) +379: [4], (-52.5436 -52.1629 -46.0525) -> (11.496650 11.482183 7.250000) +379: [5], (53.3054 -51.7821 -46.053) -> (7.474390 11.467712 7.249981) +379: [6], (52.1632 53.3054 -46.053) -> (7.517794 7.474390 7.249981) +379: [7], (-52.9244 53.3054 -46.053) -> (11.511120 7.474390 7.249981) +379: BSPLINE PARMS +379: max_its = 5 +379: max_feval = 5 +379: BSPLINE XFORM HEADER +379: vox_per_rgn = 4 4 4 +379: roi_offset = 0 0 0 +379: roi_dim = 19 19 19 +379: img_dc = -1 0 0 0 -1 0 0 0 1 +379: BST METRICS +379: MET 110100 MSE 1.000000 +379: Setting nmax, mmax = 1536 41 +379: >>> START +379: This problem is unconstrained. +379: [ 0, 0] SCORE 1785.722 NV 6859 GM -104.585 GN 27.6 [ 0.002 s ] +379: MSE 1339.480 LM 446.242 +379: CMIN 0.00 CAVG 0.00 CMAX 0.00 +379: LSD 0.00 +379: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.010 s ] +379: MSE 1303.402 LM 437.384 +379: CMIN -0.03 CAVG 0.00 CMAX 0.57 +379: LSD 1.00 +379: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.001 s ] +379: MSE 1164.662 LM 402.938 +379: CMIN -0.17 CAVG 0.01 CMAX 2.86 +379: LSD 5.00 +379: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.001 s ] +379: MSE 698.326 LM 280.914 +379: CMIN -0.71 CAVG 0.05 CMAX 12.03 +379: LSD 21.00 +379: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.034 s ] +379: MSE 81.402 LM 37.433 +379: CMIN -1.76 CAVG 0.19 CMAX 39.56 +379: LSD 55.80 +379: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.001 s ] +379: MSE 47.343 LM 22.393 +379: CMIN -3.07 CAVG 0.19 CMAX 44.32 +379: LSD 10.82 +379: [2] xf_out->m_type = 9, xf_in->m_type = 0 +379: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +379: bspline_xform_initialize +379: rdims = (5,5,5) +379: vox_per_rgn = (8,8,8) +379: cdims = (8 8 8) +379: ** Registration worker thread finished. +379: Writing transformation ... +379: Warping... +379: Running: plm_warp_native +379: Converting input image... +379: Converting xform... +379: bspline_xform_initialize +379: rdims = (5,5,5) +379: vox_per_rgn = (8,8,8) +379: cdims = (8 8 8) +379: Creating output vf... +379: Creating output volume... +379: Running native warper... +379: bspline_warp complete. +379: Back convert to original type... +379: > Convert vf to itk +379: > Conversion complete. +379: plm_warp_native is complete. +379: Saving image... +379: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha +379: Saving warped landmarks... +379: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-warped.fcsv +379: Saving vf... +379: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-vf.mha +379: Load: 0.107252 +379: Run: 0.0815561 +379: Save: 0.104048 +379: Total: 0.292856 +379: Finished! +379: +379: STDERR: +test 406 + Start 406: plm-bsp-dcos-f -424: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -424: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -424: Test timeout computed to be: 1500 -403: RETVAL: 0 -403: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -403: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha -403: Launching registration worker thread -403: Inside registration worker thread -403: Doing registration stage -403: [1] xf_in->m_type = 0, xf_out->m_type = 0 -403: RESAMPLE 1 1: (2 2 2), (2 2 2) -403: RESAMPLE 1 1: (2 2 2), (2 2 2) -403: volume_calc_grad complete. -403: bspline_xform_initialize -403: Warning: vox_per_rgn was less than 4. -403: Warning: vox_per_rgn was less than 4. -403: Warning: vox_per_rgn was less than 4. -403: rdims = (5,5,5) -403: vox_per_rgn = (4,4,4) -403: cdims = (8 8 8) -403: Algorithm flavor = h -403: Threading = 0 -403: >> Checking JH allocation -403: BSPLINE PARMS -403: max_its = 5 -403: max_feval = 5 -403: BSPLINE XFORM HEADER -403: vox_per_rgn = 4 4 4 -403: roi_offset = 0 0 0 -403: roi_dim = 19 19 19 -403: img_dc = 1 0 0 0 1 0 0 0 1 -403: BST METRICS -403: MET 110100 MSE 1.000000 -403: Setting nmax, mmax = 1536 41 -403: >>> START -403: This problem is unconstrained. -403: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.002 s ] -403: CMIN 0.00 CAVG 0.00 CMAX 0.00 -403: LSD 0.00 -403: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.030 s ] -403: CMIN -0.42 CAVG -0.00 CMAX 0.04 -403: LSD 1.00 -403: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.002 s ] -403: CMIN -2.08 CAVG -0.02 CMAX 0.22 -403: LSD 5.00 -403: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.022 s ] -403: CMIN -8.76 CAVG -0.07 CMAX 0.93 -403: LSD 21.00 -403: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.002 s ] -403: CMIN -35.44 CAVG -0.29 CMAX 3.78 -403: LSD 85.00 -403: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.026 s ] -403: CMIN -126.28 CAVG -0.93 CMAX 14.98 -403: LSD 199.65 -403: [2] xf_out->m_type = 9, xf_in->m_type = 0 -403: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -403: bspline_xform_initialize -403: rdims = (5,5,5) -403: vox_per_rgn = (8,8,8) -403: cdims = (8 8 8) -403: ** Registration worker thread finished. -403: Writing transformation ... -403: Warping... -403: Running: plm_warp_native -403: Converting input image... -403: Converting xform... -403: bspline_xform_initialize -403: rdims = (5,5,5) -403: vox_per_rgn = (8,8,8) -403: cdims = (8 8 8) -403: Creating output vf... -403: Creating output volume... -403: Running native warper... -403: bspline_warp complete. -403: Back convert to original type... -403: > Convert vf to itk -403: > Conversion complete. -403: plm_warp_native is complete. -403: Saving image... -403: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd -403: Saving vf... -403: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-vf.nrrd -403: Load: 0.0462601 -403: Run: 0.104052 -403: Save: 0.237511 -403: Total: 0.387823 -403: Finished! -403: -403: STDERR: -403: Not an error -123/578 Test #403: plm-bsp-dcos-e ........................ Passed 0.78 sec -test 427 - Start 427: plm-reg-trans-a +406: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +406: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +406: Test timeout computed to be: 1500 +379: Not an error +123/578 Test #379: plm-bsp-landmark-b .................... Passed 0.70 sec +test 409 + Start 409: plm-reg-multi-a -427: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -427: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -427: Test timeout computed to be: 1500 -406: RETVAL: 0 -406: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha -406: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -406: Launching registration worker thread -406: Inside registration worker thread -406: Doing registration stage -406: [1] xf_in->m_type = 0, xf_out->m_type = 0 -406: RESAMPLE 1 1: (2 2 2), (2 2 2) -406: RESAMPLE 1 1: (2 2 2), (2 2 2) -406: volume_calc_grad complete. -406: bspline_xform_initialize -406: Warning: vox_per_rgn was less than 4. -406: Warning: vox_per_rgn was less than 4. -406: Warning: vox_per_rgn was less than 4. -406: rdims = (5,5,5) -406: vox_per_rgn = (4,4,4) -406: cdims = (8 8 8) -406: Algorithm flavor = h -406: Threading = 0 -406: >> Checking JH allocation -406: BSPLINE PARMS -406: max_its = 5 -406: max_feval = 5 -406: BSPLINE XFORM HEADER -406: vox_per_rgn = 4 4 4 -406: roi_offset = 0 0 0 -406: roi_dim = 19 19 19 -406: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 -406: BST METRICS -406: MET 110100 MSE 1.000000 -406: Setting nmax, mmax = 1536 41 -406: >>> START -406: This problem is unconstrained. -406: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.008 s ] -406: CMIN 0.00 CAVG 0.00 CMAX 0.00 -406: LSD 0.00 -406: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.001 s ] -406: CMIN -0.09 CAVG 0.00 CMAX 0.49 -406: LSD 1.00 -406: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.001 s ] -406: CMIN -0.46 CAVG 0.01 CMAX 2.46 -406: LSD 5.00 -406: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.001 s ] -406: CMIN -1.93 CAVG 0.04 CMAX 10.33 -406: LSD 21.00 -406: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.029 s ] -406: CMIN -14.50 CAVG 0.20 CMAX 61.00 -406: LSD 95.90 -406: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.001 s ] -406: CMIN -12.15 CAVG 0.16 CMAX 47.74 -406: LSD 26.24 -406: [2] xf_out->m_type = 9, xf_in->m_type = 0 -406: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -406: bspline_xform_initialize -406: rdims = (5,5,5) -406: vox_per_rgn = (8,8,8) -406: cdims = (8 8 8) -406: ** Registration worker thread finished. -406: Writing transformation ... -406: Warping... -406: Running: plm_warp_native -406: Converting input image... -406: Converting xform... -406: bspline_xform_initialize -406: rdims = (5,5,5) -406: vox_per_rgn = (8,8,8) -406: cdims = (8 8 8) -406: Creating output vf... -406: Creating output volume... -406: Running native warper... -406: bspline_warp complete. -406: Back convert to original type... -406: > Convert vf to itk -406: > Conversion complete. -406: plm_warp_native is complete. -406: Saving image... -406: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd -406: Saving vf... -406: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-vf.nrrd -406: Load: 0.0999291 -406: Run: 0.0764511 -406: Save: 0.19946 -406: Total: 0.37584 -406: Finished! -406: -406: STDERR: -406: Not an error +409: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +409: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +409: Test timeout computed to be: 1500 +406: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +406: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt +406: EXPECTED_ERRNO is +298: RETVAL: 0 +298: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +298: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +298: Launching registration worker thread +298: Inside registration worker thread +298: Doing registration stage +298: [1] xf_in->m_type = 0, xf_out->m_type = 0 +298: Fixed image for this stage: +298: Dim = 38 38 38 +298: Origin = -25 -25 -25 +298: Spacing = 1.31579 1.31579 1.31579 +298: Direction Cosines = +298: 1 0 0 +298: 0 1 0 +298: 0 0 1 +298: Moving image for this stage: +298: Dim = 38 38 38 +298: Origin = -25 -25 -25 +298: Spacing = 1.31579 1.31579 1.31579 +298: Direction Cosines = +298: 1 0 0 +298: 0 1 0 +298: 0 0 1 +298: Starting ITK registration +298: StartEvent: +298: MSE [ 0, 0] 18945.891 [ 0.094 secs] +298: MSE [ 0, 1] 18140.496 [ 0.120 secs] +298: MSE [ 0, 2] 14979.440 [ 0.085 secs] +298: MSE [ 0, 3] 5390.861 [ 0.109 secs] +298: MSE [ 0, 4,319.84] 5390.861 * +298: MSE [ 1, 5] 4259.522 [ 0.112 secs] +298: MSE [ 1, 6,313.58] 4259.522 -1131.34 * +298: MSE [ 2, 7] 465.644 [ 0.128 secs] +298: MSE [ 2, 8,36.78] 465.644 -3793.88 * +298: MSE [ 3, 9] 382.530 [ 0.105 secs] +298: MSE [ 3, 10,21.77] 382.530 -83.11 * +298: MSE [ 4, 11] 289.494 [ 0.104 secs] +298: MSE [ 4, 12,13.35] 289.494 -93.04 * +298: MSE [ 5, 13] 226.103 [ 0.139 secs] +298: MSE [ 5, 14,21.50] 226.103 -63.39 * +298: EndEvent: +298: Too many iterations. Iterations = 6 +298: LBFGSBOptimizer: Failed user requeset +298: ITK registration complete +298: [2] xf_out->m_type = 6, xf_in->m_type = 0 +298: ** Registration worker thread finished. +298: Writing transformation ... +298: Warping... +298: plm_warp_itk: xform_to_itk_vf +298: plm_warp_itk: convert_to_itk +298: plm_warp_itk: warping... +298: Saving image... +298: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha +298: Saving vf... +298: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-vf.mha +298: Load: 0.017668 +298: Run: 1.06926 +298: Save: 0.229624 +298: Total: 1.31655 +298: Finished! +298: +298: STDERR: +298: Not an error +124/578 Test #298: plm-reg-itk-bspline ................... Passed 1.47 sec +test 412 + Start 412: plm-reg-multi-b + +412: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +412: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +412: Test timeout computed to be: 1500 385: RETVAL: 0 385: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 385: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha @@ -10630,23 +10623,23 @@ 385: MSE 1339.480 LM 446.242 385: CMIN 0.00 CAVG 0.00 CMAX 0.00 385: LSD 0.00 -385: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.026 s ] +385: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.014 s ] 385: MSE 1303.402 LM 437.384 385: CMIN -0.03 CAVG 0.00 CMAX 0.57 385: LSD 1.00 -385: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.002 s ] +385: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.001 s ] 385: MSE 1164.662 LM 402.938 385: CMIN -0.17 CAVG 0.01 CMAX 2.86 385: LSD 5.00 -385: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.029 s ] +385: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.017 s ] 385: MSE 698.326 LM 280.914 385: CMIN -0.71 CAVG 0.05 CMAX 12.03 385: LSD 21.00 -385: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.002 s ] +385: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.001 s ] 385: MSE 81.402 LM 37.433 385: CMIN -1.76 CAVG 0.19 CMAX 39.56 385: LSD 55.80 -385: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.030 s ] +385: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.022 s ] 385: MSE 47.343 LM 22.393 385: CMIN -3.07 CAVG 0.19 CMAX 44.32 385: LSD 10.82 @@ -10678,238 +10671,124 @@ 385: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha 385: Saving vf... 385: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-vf.mha -385: Load: 0.141626 -385: Run: 0.113723 -385: Save: 0.0952201 -385: Total: 0.350569 +385: Load: 0.110427 +385: Run: 0.0760231 +385: Save: 0.0740459 +385: Total: 0.260496 385: Finished! 385: 385: STDERR: 385: Not an error -424: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -424: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt -424: EXPECTED_ERRNO is -124/578 Test #406: plm-bsp-dcos-f ........................ Passed 0.76 sec -125/578 Test #385: plm-bsp-landmark-d .................... Passed 1.06 sec -test 430 - Start 430: plm-reg-trans-b - -430: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -430: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -430: Test timeout computed to be: 1500 -test 433 - Start 433: plm-reg-trans-mi-a - -433: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-mi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -433: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -433: Test timeout computed to be: 1500 -400: RETVAL: 0 -400: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha -400: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -400: Launching registration worker thread -400: Inside registration worker thread -400: Doing registration stage -400: [1] xf_in->m_type = 0, xf_out->m_type = 0 -400: RESAMPLE 1 1: (2 2 2), (2 2 2) -400: RESAMPLE 1 1: (2 2 2), (2 2 2) -400: volume_calc_grad complete. -400: bspline_xform_initialize -400: Warning: vox_per_rgn was less than 4. -400: Warning: vox_per_rgn was less than 4. -400: Warning: vox_per_rgn was less than 4. -400: rdims = (5,5,5) -400: vox_per_rgn = (4,4,4) -400: cdims = (8 8 8) -400: Algorithm flavor = c -400: Threading = 0 -400: >> Checking JH allocation -400: BSPLINE PARMS -400: max_its = 5 -400: max_feval = 5 -400: BSPLINE XFORM HEADER -400: vox_per_rgn = 4 4 4 -400: roi_offset = 0 0 0 -400: roi_dim = 19 19 19 -400: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 -400: BST METRICS -400: MET 110100 MSE 1.000000 -400: Setting nmax, mmax = 1536 41 -400: >>> START -400: This problem is unconstrained. -400: [ 0, 0] MSE 2326.658 NV 5814 GM -90.046 GN 30.1 [ 0.002 s ] -400: CMIN 0.00 CAVG 0.00 CMAX 0.00 -400: LSD 0.00 -400: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.002 s ] -400: CMIN -0.09 CAVG 0.00 CMAX 0.49 -400: LSD 1.00 -400: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.042 s ] -400: CMIN -0.46 CAVG 0.01 CMAX 2.46 -400: LSD 5.00 -400: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.002 s ] -400: CMIN -1.93 CAVG 0.04 CMAX 10.33 -400: LSD 21.00 -400: [ 1, 4] MSE 880.230 NV 5809 GM 22.704 GN 11.1 [ 0.022 s ] -400: CMIN -14.50 CAVG 0.20 CMAX 61.00 -400: LSD 95.90 -400: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.002 s ] -400: CMIN -12.15 CAVG 0.16 CMAX 47.74 -400: LSD 26.24 -400: [2] xf_out->m_type = 9, xf_in->m_type = 0 -400: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -400: bspline_xform_initialize -400: rdims = (5,5,5) -400: vox_per_rgn = (8,8,8) -400: cdims = (8 8 8) -400: ** Registration worker thread finished. -400: Writing transformation ... -400: Warping... -400: Running: plm_warp_native -400: Converting input image... -400: Converting xform... -400: bspline_xform_initialize -400: rdims = (5,5,5) -400: vox_per_rgn = (8,8,8) -400: cdims = (8 8 8) -400: Creating output vf... -400: Creating output volume... -400: Running native warper... -400: bspline_warp complete. -400: Back convert to original type... -400: > Convert vf to itk -400: > Conversion complete. -400: plm_warp_native is complete. -400: Saving image... -400: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd -400: Saving vf... -400: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-vf.nrrd -400: Load: 0.0841219 -400: Run: 0.099756 -400: Save: 0.239913 -400: Total: 0.423791 -400: Finished! -400: -400: STDERR: -400: Not an error -126/578 Test #400: plm-bsp-dcos-d ........................ Passed 0.88 sec -test 436 - Start 436: plm-reg-autores-a +125/578 Test #385: plm-bsp-landmark-d .................... Passed 0.66 sec +test 415 + Start 415: plm-reg-dv-itk-translation -436: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -436: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -436: Test timeout computed to be: 1500 -427: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -427: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt -427: EXPECTED_ERRNO is -430: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -430: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt -430: EXPECTED_ERRNO is -433: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -433: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt -433: EXPECTED_ERRNO is -388: RETVAL: 0 -388: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha -388: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha -388: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.txt -388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.txt -388: Loading moving landmarks: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.txt -388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.txt -388: Launching registration worker thread -388: Inside registration worker thread -388: Doing registration stage -388: [1] xf_in->m_type = 0, xf_out->m_type = 0 -388: RESAMPLE 1 1: (2 2 2), (2 2 2) -388: RESAMPLE 1 1: (2 2 2), (2 2 2) -388: volume_calc_grad complete. -388: bspline_xform_initialize -388: Warning: vox_per_rgn was less than 4. -388: Warning: vox_per_rgn was less than 4. -388: Warning: vox_per_rgn was less than 4. -388: rdims = (5,5,5) -388: vox_per_rgn = (4,4,4) -388: cdims = (8 8 8) -388: Algorithm flavor = h -388: Threading = 0 -388: Landmarks: 0 fixed, 0 moving, lambda = 1.000000 -388: >> Checking JH allocation -388: BSPLINE PARMS -388: max_its = 5 -388: max_feval = 5 -388: BSPLINE XFORM HEADER -388: vox_per_rgn = 4 4 4 -388: roi_offset = 0 0 0 -388: roi_dim = 19 19 19 -388: img_dc = -1 0 0 0 -1 0 0 0 1 -388: BST METRICS -388: MET 110100 MSE 1.000000 -388: Setting nmax, mmax = 1536 41 -388: >>> START -388: This problem is unconstrained. -388: [ 0, 0] MSE 1339.480 NV 6859 GM -84.834 GN 23.2 [ 0.002 s ] -388: CMIN 0.00 CAVG 0.00 CMAX 0.00 -388: LSD 0.00 -388: [ 0, 1] MSE 1303.294 NV 6859 GM -83.620 GN 22.8 [ 0.002 s ] -388: CMIN -0.04 CAVG 0.00 CMAX 0.59 -388: LSD 1.00 -388: [ 0, 2] MSE 1164.232 NV 6859 GM -78.768 GN 21.5 [ 0.010 s ] -388: CMIN -0.19 CAVG 0.01 CMAX 2.96 -388: LSD 5.00 -388: [ 0, 3] MSE 698.336 NV 6859 GM -59.420 GN 16.2 [ 0.002 s ] -388: CMIN -0.80 CAVG 0.05 CMAX 12.42 -388: LSD 21.00 -388: [ 1, 4] MSE 89.012 NV 6859 GM 0.171 GN 3.29 [ 0.002 s ] -388: CMIN -2.05 CAVG 0.17 CMAX 39.56 -388: LSD 52.33 -388: [ 2, 5] MSE 51.991 NV 6859 GM 2.502 GN 2.38 [ 0.002 s ] -388: CMIN -3.69 CAVG 0.18 CMAX 41.73 -388: LSD 11.03 -388: [2] xf_out->m_type = 9, xf_in->m_type = 0 -388: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -388: bspline_xform_initialize -388: rdims = (5,5,5) -388: vox_per_rgn = (8,8,8) -388: cdims = (8 8 8) -388: ** Registration worker thread finished. -388: Writing transformation ... -388: Warping... -388: Running: plm_warp_native -388: Converting input image... -388: Converting xform... -388: bspline_xform_initialize -388: rdims = (5,5,5) -388: vox_per_rgn = (8,8,8) -388: cdims = (8 8 8) -388: Creating output vf... -388: Creating output volume... -388: Running native warper... -388: bspline_warp complete. -388: Back convert to original type... -388: > Convert vf to itk -388: > Conversion complete. -388: plm_warp_native is complete. -388: Saving image... -388: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha -388: Saving warped landmarks... -388: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-warped.fcsv -388: Saving vf... -388: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-vf.mha -388: Load: 0.179894 -388: Run: 0.056114 -388: Save: 0.0712168 -388: Total: 0.307225 -388: Finished! -388: -388: STDERR: -388: Not an error -127/578 Test #388: plm-bsp-landmark-e .................... Passed 1.10 sec -436: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -436: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt -436: EXPECTED_ERRNO is -test 439 - Start 439: plm-reg-autores-b +415: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +415: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +415: Test timeout computed to be: 1500 +409: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +409: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt +409: EXPECTED_ERRNO is +412: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +412: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt +412: EXPECTED_ERRNO is +415: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +415: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt +415: EXPECTED_ERRNO is +391: RETVAL: 0 +391: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +391: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha +391: Launching registration worker thread +391: Inside registration worker thread +391: Doing registration stage +391: [1] xf_in->m_type = 0, xf_out->m_type = 0 +391: RESAMPLE 1 1: (2 2 2), (2 2 2) +391: RESAMPLE 1 1: (2 2 2), (2 2 2) +391: volume_calc_grad complete. +391: bspline_xform_initialize +391: Warning: vox_per_rgn was less than 4. +391: Warning: vox_per_rgn was less than 4. +391: Warning: vox_per_rgn was less than 4. +391: rdims = (5,5,5) +391: vox_per_rgn = (4,4,4) +391: cdims = (8 8 8) +391: Algorithm flavor = g +391: Threading = 0 +391: >> Checking JH allocation +391: BSPLINE PARMS +391: max_its = 5 +391: max_feval = 5 +391: BSPLINE XFORM HEADER +391: vox_per_rgn = 4 4 4 +391: roi_offset = 0 0 0 +391: roi_dim = 19 19 19 +391: img_dc = 1 0 0 0 1 0 0 0 1 +391: BST METRICS +391: MET 110100 MSE 1.000000 +391: Setting nmax, mmax = 1536 41 +391: >>> START +391: This problem is unconstrained. +391: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.055 s ] +391: CMIN 0.00 CAVG 0.00 CMAX 0.00 +391: LSD 0.00 +391: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.052 s ] +391: CMIN -0.42 CAVG -0.00 CMAX 0.04 +391: LSD 1.00 +391: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.052 s ] +391: CMIN -2.08 CAVG -0.02 CMAX 0.22 +391: LSD 5.00 +391: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.056 s ] +391: CMIN -8.76 CAVG -0.07 CMAX 0.93 +391: LSD 21.00 +391: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.028 s ] +391: CMIN -35.44 CAVG -0.29 CMAX 3.78 +391: LSD 85.00 +391: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.046 s ] +391: CMIN -126.28 CAVG -0.93 CMAX 14.98 +391: LSD 199.65 +391: [2] xf_out->m_type = 9, xf_in->m_type = 0 +391: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +391: bspline_xform_initialize +391: rdims = (5,5,5) +391: vox_per_rgn = (8,8,8) +391: cdims = (8 8 8) +391: ** Registration worker thread finished. +391: Writing transformation ... +391: Warping... +391: Running: plm_warp_native +391: Converting input image... +391: Converting xform... +391: bspline_xform_initialize +391: rdims = (5,5,5) +391: vox_per_rgn = (8,8,8) +391: cdims = (8 8 8) +391: Creating output vf... +391: Creating output volume... +391: Running native warper... +391: bspline_warp complete. +391: Back convert to original type... +391: > Convert vf to itk +391: > Conversion complete. +391: plm_warp_native is complete. +391: Saving image... +391: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd +391: Saving vf... +391: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-vf.nrrd +391: Load: 0.0414841 +391: Run: 0.307545 +391: Save: 0.0729899 +391: Total: 0.422019 +391: Finished! +391: +391: STDERR: +391: Not an error +126/578 Test #391: plm-bsp-dcos-a ........................ Passed 0.72 sec +test 424 + Start 424: plm-reg-process-a -439: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -439: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -439: Test timeout computed to be: 1500 +424: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +424: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +424: Test timeout computed to be: 1500 397: RETVAL: 0 397: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 397: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha @@ -10946,7 +10825,7 @@ 397: [ 0, 0] MSE 1969.041 NV 5719 GM 151.518 GN 29 [ 0.001 s ] 397: CMIN 0.00 CAVG 0.00 CMAX 0.00 397: LSD 0.00 -397: [ 0, 1] MSE 1948.894 NV 5719 GM 150.797 GN 28.8 [ 0.025 s ] +397: [ 0, 1] MSE 1948.894 NV 5719 GM 150.797 GN 28.8 [ 0.020 s ] 397: CMIN -0.42 CAVG -0.00 CMAX 0.04 397: LSD 1.00 397: [ 0, 2] MSE 1873.203 NV 5719 GM 152.313 GN 29.2 [ 0.001 s ] @@ -10955,7 +10834,7 @@ 397: [ 0, 3] MSE 1636.132 NV 5719 GM 148.988 GN 28.8 [ 0.001 s ] 397: CMIN -8.76 CAVG -0.07 CMAX 0.93 397: LSD 21.00 -397: [ 0, 4] MSE 1351.435 NV 5719 GM 79.113 GN 23.8 [ 0.026 s ] +397: [ 0, 4] MSE 1351.435 NV 5719 GM 79.113 GN 23.8 [ 0.001 s ] 397: CMIN -35.44 CAVG -0.29 CMAX 3.78 397: LSD 85.00 397: [ 1, 5] MSE 6291.440 NV 5719 GM -73.340 GN 33.2 [ 0.001 s ] @@ -10989,279 +10868,21 @@ 397: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd 397: Saving vf... 397: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-vf.nrrd -397: Load: 0.099987 -397: Run: 0.0799279 -397: Save: 0.232184 -397: Total: 0.412099 +397: Load: 0.129509 +397: Run: 0.0399411 +397: Save: 0.138594 +397: Total: 0.308044 397: Finished! 397: 397: STDERR: 397: Not an error -128/578 Test #397: plm-bsp-dcos-c ........................ Passed 1.00 sec -test 444 - Start 444: plm-compose-a - -444: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -444: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -444: Test timeout computed to be: 1500 -439: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -439: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt -439: EXPECTED_ERRNO is -444: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -444: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha -444: EXPECTED_ERRNO is -409: RETVAL: 0 -409: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -409: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha -409: Launching registration worker thread -409: Inside registration worker thread -409: Doing registration stage -409: [1] xf_in->m_type = 0, xf_out->m_type = 0 -409: Fixed image for this stage: -409: Dim = 19 19 19 -409: Origin = -236.842 -236.842 -236.842 -409: Spacing = 26.3158 26.3158 26.3158 -409: Direction Cosines = -409: 1 0 0 -409: 0 1 0 -409: 0 0 1 -409: Moving image for this stage: -409: Dim = 19 19 19 -409: Origin = -236.842 -236.842 -236.842 -409: Spacing = 26.3158 26.3158 26.3158 -409: Direction Cosines = -409: 1 0 0 -409: 0 1 0 -409: 0 0 1 -409: Initial Parameters = [0, 0, 0, 0, 0, 0] -409: Starting ITK registration -409: StartEvent: [0, 0, 0, 0, 0, 0] -409: MSE [ 0, 0,10.00] 2961.438 [2.1249902852512537e-23, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999996, -4.0038216958590105e-15, -4.177900900026794e-15] -409: :: [0, 0, 0, 0, 0, 0] -409: * -409: MSE [ 1, 1,10.00] 2086.091 [-2.2205298185013314e-18, -3.349986047568699e-7, 3.349986057214795e-7, -19.999999999999872, -9.9423571118298e-7, -9.942357120509572e-7] -875.35 -409: :: [2.1249902852512537e-23, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999996, -4.0038216958590105e-15, -4.177900900026794e-15] -409: * -409: MSE [ 2, 2, 5.00] 1944.674 [-1.9957785024470283e-17, -0.000002038776367804276, 0.0000020387763874089956, -15.000000000094076, -0.000022427961022415327, -0.000022427960964674192] -141.42 -409: :: [-2.2205298185013314e-18, -3.349986047568699e-7, 3.349986057214795e-7, -19.999999999999872, -9.9423571118298e-7, -9.942357120509572e-7] -409: * -409: MSE [ 3, 3, 2.50] 1989.993 [-8.785641913405714e-17, -0.000008253984619362118, 0.00000825398472625445, -17.499999999592845, -0.0000555725569053301, -0.000055572556397062066] 45.32 -409: MSE [ 4, 4, 2.50] 1946.484 [-1.7585120327959246e-14, -0.0010533617728833607, 0.001053361792799982, -19.999966305224685, -0.008992370046288408, -0.00899236992082999] -43.51 -409: EndEvent: [-1.7585120327959246e-14, -0.0010533617728833607, 0.001053361792799982, -19.999966305224685, -0.008992370046288408, -0.00899236992082999] -409: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. -409: ITK registration complete -409: [2] xf_out->m_type = 2, xf_in->m_type = 0 -409: Warping... -409: plm_warp_itk: xform_to_itk_vf -409: plm_warp_itk: convert_to_itk -409: plm_warp_itk: warping... -409: Saving image... -409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stage-1.mha -409: Doing registration stage -409: [1] xf_in->m_type = 2, xf_out->m_type = 0 -409: SUBSAMPLE: (1 1 1), (1 1 1) -409: volume_calc_grad complete. -409: kerx: 0.0000000000 1.0000000000 0.0000000000 -409: kery: 0.0000000000 1.0000000000 0.0000000000 -409: kerz: 0.0000000000 1.0000000000 0.0000000000 -409: MSE [ 0] 4770.7 (0.947) [ 0.004 secs] -409: MSE [ 1] 4770.7 (0.947) [ 0.008 secs] -409: MSE [ 2] 4770.7 (0.947) [ 0.006 secs] -409: MSE [ 3] 4770.7 (0.947) [ 0.014 secs] -409: MSE [ 4] 4770.7 (0.947) [ 0.005 secs] -409: Time for 5 iterations = 0.037222 (0.007444 sec / it) -409: [2] xf_out->m_type = 10, xf_in->m_type = 2 -409: Warping... -409: plm_warp_itk: xform_to_itk_vf -409: ** Registration worker thread finished. -409: plm_warp_itk: convert_to_itk -409: plm_warp_itk: warping... -409: Saving image... -409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-img.nrrd -409: Saving vf... -409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd -409: Load: 0.074157 -409: Run: 0.067744 -409: Save: 0.0123649 -409: Total: 0.154266 -409: Finished! -409: -409: STDERR: -409: Not an error -129/578 Test #409: plm-reg-multi-a ....................... Passed 0.79 sec -test 448 - Start 448: plm-compose-b - -448: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -448: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -448: Test timeout computed to be: 1500 -391: RETVAL: 0 -391: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -391: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha -391: Launching registration worker thread -391: Inside registration worker thread -391: Doing registration stage -391: [1] xf_in->m_type = 0, xf_out->m_type = 0 -391: RESAMPLE 1 1: (2 2 2), (2 2 2) -391: RESAMPLE 1 1: (2 2 2), (2 2 2) -391: volume_calc_grad complete. -391: bspline_xform_initialize -391: Warning: vox_per_rgn was less than 4. -391: Warning: vox_per_rgn was less than 4. -391: Warning: vox_per_rgn was less than 4. -391: rdims = (5,5,5) -391: vox_per_rgn = (4,4,4) -391: cdims = (8 8 8) -391: Algorithm flavor = g -391: Threading = 0 -391: >> Checking JH allocation -391: BSPLINE PARMS -391: max_its = 5 -391: max_feval = 5 -391: BSPLINE XFORM HEADER -391: vox_per_rgn = 4 4 4 -391: roi_offset = 0 0 0 -391: roi_dim = 19 19 19 -391: img_dc = 1 0 0 0 1 0 0 0 1 -391: BST METRICS -391: MET 110100 MSE 1.000000 -391: Setting nmax, mmax = 1536 41 -391: >>> START -391: This problem is unconstrained. -391: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.071 s ] -391: CMIN 0.00 CAVG 0.00 CMAX 0.00 -391: LSD 0.00 -391: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.100 s ] -391: CMIN -0.42 CAVG -0.00 CMAX 0.04 -391: LSD 1.00 -391: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.036 s ] -391: CMIN -2.08 CAVG -0.02 CMAX 0.22 -391: LSD 5.00 -391: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.112 s ] -391: CMIN -8.76 CAVG -0.07 CMAX 0.93 -391: LSD 21.00 -391: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.044 s ] -391: CMIN -35.44 CAVG -0.29 CMAX 3.78 -391: LSD 85.00 -391: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.076 s ] -391: CMIN -126.28 CAVG -0.93 CMAX 14.98 -391: LSD 199.65 -391: [2] xf_out->m_type = 9, xf_in->m_type = 0 -391: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -391: bspline_xform_initialize -391: rdims = (5,5,5) -391: vox_per_rgn = (8,8,8) -391: cdims = (8 8 8) -391: ** Registration worker thread finished. -391: Writing transformation ... -391: Warping... -391: Running: plm_warp_native -391: Converting input image... -391: Converting xform... -391: bspline_xform_initialize -391: rdims = (5,5,5) -391: vox_per_rgn = (8,8,8) -391: cdims = (8 8 8) -391: Creating output vf... -391: Creating output volume... -391: Running native warper... -391: bspline_warp complete. -391: Back convert to original type... -391: > Convert vf to itk -391: > Conversion complete. -391: plm_warp_native is complete. -391: Saving image... -391: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd -391: Saving vf... -391: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-vf.nrrd -391: Load: 0.080148 -391: Run: 0.455777 -391: Save: 0.144175 -391: Total: 0.6801 -391: Finished! -391: -391: STDERR: -391: Not an error -298: RETVAL: 0 -298: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -298: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -298: Launching registration worker thread -298: Inside registration worker thread -298: Doing registration stage -298: [1] xf_in->m_type = 0, xf_out->m_type = 0 -298: Fixed image for this stage: -298: Dim = 38 38 38 -298: Origin = -25 -25 -25 -298: Spacing = 1.31579 1.31579 1.31579 -298: Direction Cosines = -298: 1 0 0 -298: 0 1 0 -298: 0 0 1 -298: Moving image for this stage: -298: Dim = 38 38 38 -298: Origin = -25 -25 -25 -298: Spacing = 1.31579 1.31579 1.31579 -298: Direction Cosines = -298: 1 0 0 -298: 0 1 0 -298: 0 0 1 -298: Starting ITK registration -298: StartEvent: -298: MSE [ 0, 0] 18945.891 [ 0.158 secs] -298: MSE [ 0, 1] 18140.496 [ 0.211 secs] -298: MSE [ 0, 2] 14979.440 [ 0.196 secs] -298: MSE [ 0, 3] 5390.861 [ 0.131 secs] -298: MSE [ 0, 4,319.84] 5390.861 * -298: MSE [ 1, 5] 4259.522 [ 0.121 secs] -298: MSE [ 1, 6,313.58] 4259.522 -1131.34 * -298: MSE [ 2, 7] 465.644 [ 0.115 secs] -298: MSE [ 2, 8,36.78] 465.644 -3793.88 * -298: MSE [ 3, 9] 382.530 [ 0.136 secs] -298: MSE [ 3, 10,21.77] 382.530 -83.11 * -298: MSE [ 4, 11] 289.494 [ 0.183 secs] -298: MSE [ 4, 12,13.35] 289.494 -93.04 * -298: MSE [ 5, 13] 226.103 [ 0.223 secs] -298: MSE [ 5, 14,21.50] 226.103 -63.39 * -298: EndEvent: -298: Too many iterations. Iterations = 6 -298: LBFGSBOptimizer: Failed user requeset -298: ITK registration complete -298: [2] xf_out->m_type = 6, xf_in->m_type = 0 -298: ** Registration worker thread finished. -298: Writing transformation ... -298: Warping... -298: plm_warp_itk: xform_to_itk_vf -298: plm_warp_itk: convert_to_itk -298: plm_warp_itk: warping... -298: Saving image... -298: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha -298: Saving vf... -298: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-vf.mha -298: Load: 0.044421 -298: Run: 1.63969 -298: Save: 0.153183 -298: Total: 1.83729 -298: Finished! -298: -298: STDERR: -298: Not an error -130/578 Test #298: plm-reg-itk-bspline ................... Passed 2.04 sec -131/578 Test #391: plm-bsp-dcos-a ........................ Passed 1.17 sec -test 452 - Start 452: plm-compose-c - -452: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -452: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -452: Test timeout computed to be: 1500 -test 456 - Start 456: plm-resample-a +127/578 Test #397: plm-bsp-dcos-c ........................ Passed 0.67 sec +test 427 + Start 427: plm-reg-trans-a -456: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -456: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -456: Test timeout computed to be: 1500 -448: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -448: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha -448: EXPECTED_ERRNO is +427: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +427: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +427: Test timeout computed to be: 1500 394: RETVAL: 0 394: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 394: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha @@ -11295,22 +10916,22 @@ 394: Setting nmax, mmax = 1536 41 394: >>> START 394: This problem is unconstrained. -394: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.132 s ] +394: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.065 s ] 394: CMIN 0.00 CAVG 0.00 CMAX 0.00 394: LSD 0.00 -394: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.092 s ] +394: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.039 s ] 394: CMIN -0.09 CAVG 0.00 CMAX 0.49 394: LSD 1.00 -394: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.056 s ] +394: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.035 s ] 394: CMIN -0.46 CAVG 0.01 CMAX 2.46 394: LSD 5.00 -394: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.056 s ] +394: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.044 s ] 394: CMIN -1.93 CAVG 0.04 CMAX 10.33 394: LSD 21.00 -394: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.036 s ] +394: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.088 s ] 394: CMIN -14.50 CAVG 0.20 CMAX 61.00 394: LSD 95.90 -394: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.068 s ] +394: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.046 s ] 394: CMIN -12.15 CAVG 0.16 CMAX 47.74 394: LSD 26.24 394: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -11341,30 +10962,271 @@ 394: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd 394: Saving vf... 394: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-vf.nrrd -394: Load: 0.144171 -394: Run: 0.451845 -394: Save: 0.0902359 -394: Total: 0.686252 +394: Load: 0.0930541 +394: Run: 0.325983 +394: Save: 0.097532 +394: Total: 0.516569 394: Finished! 394: 394: STDERR: 394: Not an error -132/578 Test #394: plm-bsp-dcos-b ........................ Passed 1.15 sec -test 459 - Start 459: plm-resample-b +128/578 Test #394: plm-bsp-dcos-b ........................ Passed 0.73 sec +test 430 + Start 430: plm-reg-trans-b -459: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -459: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -459: Test timeout computed to be: 1500 -452: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -452: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha -452: EXPECTED_ERRNO is -456: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -456: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2 -456: EXPECTED_ERRNO is -459: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -459: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha -459: EXPECTED_ERRNO is +430: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +430: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +430: Test timeout computed to be: 1500 +424: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +424: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt +424: EXPECTED_ERRNO is +427: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +427: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt +427: EXPECTED_ERRNO is +430: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +430: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt +430: EXPECTED_ERRNO is +400: RETVAL: 0 +400: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha +400: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +400: Launching registration worker thread +400: Inside registration worker thread +400: Doing registration stage +400: [1] xf_in->m_type = 0, xf_out->m_type = 0 +400: RESAMPLE 1 1: (2 2 2), (2 2 2) +400: RESAMPLE 1 1: (2 2 2), (2 2 2) +400: volume_calc_grad complete. +400: bspline_xform_initialize +400: Warning: vox_per_rgn was less than 4. +400: Warning: vox_per_rgn was less than 4. +400: Warning: vox_per_rgn was less than 4. +400: rdims = (5,5,5) +400: vox_per_rgn = (4,4,4) +400: cdims = (8 8 8) +400: Algorithm flavor = c +400: Threading = 0 +400: >> Checking JH allocation +400: BSPLINE PARMS +400: max_its = 5 +400: max_feval = 5 +400: BSPLINE XFORM HEADER +400: vox_per_rgn = 4 4 4 +400: roi_offset = 0 0 0 +400: roi_dim = 19 19 19 +400: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 +400: BST METRICS +400: MET 110100 MSE 1.000000 +400: Setting nmax, mmax = 1536 41 +400: >>> START +400: This problem is unconstrained. +400: [ 0, 0] MSE 2326.658 NV 5814 GM -90.046 GN 30.1 [ 0.001 s ] +400: CMIN 0.00 CAVG 0.00 CMAX 0.00 +400: LSD 0.00 +400: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.005 s ] +400: CMIN -0.09 CAVG 0.00 CMAX 0.49 +400: LSD 1.00 +400: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.002 s ] +400: CMIN -0.46 CAVG 0.01 CMAX 2.46 +400: LSD 5.00 +400: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.001 s ] +400: CMIN -1.93 CAVG 0.04 CMAX 10.33 +400: LSD 21.00 +400: [ 1, 4] MSE 880.230 NV 5809 GM 22.704 GN 11.1 [ 0.001 s ] +400: CMIN -14.50 CAVG 0.20 CMAX 61.00 +400: LSD 95.90 +400: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.005 s ] +400: CMIN -12.15 CAVG 0.16 CMAX 47.74 +400: LSD 26.24 +400: [2] xf_out->m_type = 9, xf_in->m_type = 0 +400: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +400: bspline_xform_initialize +400: rdims = (5,5,5) +400: vox_per_rgn = (8,8,8) +400: cdims = (8 8 8) +400: ** Registration worker thread finished. +400: Writing transformation ... +400: Warping... +400: Running: plm_warp_native +400: Converting input image... +400: Converting xform... +400: bspline_xform_initialize +400: rdims = (5,5,5) +400: vox_per_rgn = (8,8,8) +400: cdims = (8 8 8) +400: Creating output vf... +400: Creating output volume... +400: Running native warper... +400: bspline_warp complete. +400: Back convert to original type... +400: > Convert vf to itk +400: > Conversion complete. +400: plm_warp_native is complete. +400: Saving image... +400: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd +400: Saving vf... +400: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-vf.nrrd +400: Load: 0.036689 +400: Run: 0.033772 +400: Save: 0.079303 +400: Total: 0.149764 +400: Finished! +400: +400: STDERR: +400: Not an error +129/578 Test #400: plm-bsp-dcos-d ........................ Passed 0.44 sec +test 433 + Start 433: plm-reg-trans-mi-a + +433: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-mi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +433: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +433: Test timeout computed to be: 1500 +433: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +433: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt +433: EXPECTED_ERRNO is +415: RETVAL: 0 +415: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +415: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +415: Launching registration worker thread +415: Inside registration worker thread +415: Doing registration stage +415: [1] xf_in->m_type = 0, xf_out->m_type = 0 +415: Fixed image for this stage: +415: Dim = 19 19 19 +415: Origin = -24.3421 -24.3421 -24.3421 +415: Spacing = 2.63158 2.63158 2.63158 +415: Direction Cosines = +415: 1 0 0 +415: 0 1 0 +415: 0 0 1 +415: Moving image for this stage: +415: Dim = 19 19 19 +415: Origin = -24.3421 -24.3421 -24.3421 +415: Spacing = 2.63158 2.63158 2.63158 +415: Direction Cosines = +415: 1 0 0 +415: 0 1 0 +415: 0 0 1 +415: Initial Parameters = [0, 0, 0] +415: Starting ITK registration +415: StartEvent: [0, 0, 0] +415: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987488, -0.004883617032987256] +415: :: [0, 0, 0] +415: * +415: MSE [ 1, 1, 5.00] 1.116 [5.318441699151528, 1.2366948554205819, 1.2366948554205908] -18755.12 +415: :: [9.999997615028182, -0.004883617032987488, -0.004883617032987256] +415: * +415: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085832, 0.5310844064631243, 0.5310844064631259] 5543.49 +415: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442488, -0.0704547497505017, -0.07045474975050225] -4090.90 +415: MSE [ 4, 4, 1.25] 4.252 [10.130622373667467, 0.8052975809356713, 0.8052975809356699] -1449.45 +415: EndEvent: [10.130622373667467, 0.8052975809356713, 0.8052975809356699] +415: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. +415: ITK registration complete +415: [2] xf_out->m_type = 1, xf_in->m_type = 0 +415: ** Registration worker thread finished. +415: Writing transformation ... +415: Warping... +415: plm_warp_itk: xform_to_itk_vf +415: plm_warp_itk: convert_to_itk +415: plm_warp_itk: warping... +415: Saving image... +415: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd +415: Saving vf... +415: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-vf.nrrd +415: Load: 0.0199411 +415: Run: 0.0147619 +415: Save: 0.0401611 +415: Total: 0.0748641 +415: Finished! +415: +415: STDERR: +415: Not an error +403: RETVAL: 0 +403: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +403: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha +403: Launching registration worker thread +403: Inside registration worker thread +403: Doing registration stage +403: [1] xf_in->m_type = 0, xf_out->m_type = 0 +403: RESAMPLE 1 1: (2 2 2), (2 2 2) +403: RESAMPLE 1 1: (2 2 2), (2 2 2) +403: volume_calc_grad complete. +403: bspline_xform_initialize +403: Warning: vox_per_rgn was less than 4. +403: Warning: vox_per_rgn was less than 4. +403: Warning: vox_per_rgn was less than 4. +403: rdims = (5,5,5) +403: vox_per_rgn = (4,4,4) +403: cdims = (8 8 8) +403: Algorithm flavor = h +403: Threading = 0 +403: >> Checking JH allocation +403: BSPLINE PARMS +403: max_its = 5 +403: max_feval = 5 +403: BSPLINE XFORM HEADER +403: vox_per_rgn = 4 4 4 +403: roi_offset = 0 0 0 +403: roi_dim = 19 19 19 +403: img_dc = 1 0 0 0 1 0 0 0 1 +403: BST METRICS +403: MET 110100 MSE 1.000000 +403: Setting nmax, mmax = 1536 41 +403: >>> START +403: This problem is unconstrained. +403: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.006 s ] +403: CMIN 0.00 CAVG 0.00 CMAX 0.00 +403: LSD 0.00 +403: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.001 s ] +403: CMIN -0.42 CAVG -0.00 CMAX 0.04 +403: LSD 1.00 +403: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.001 s ] +403: CMIN -2.08 CAVG -0.02 CMAX 0.22 +403: LSD 5.00 +403: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.009 s ] +403: CMIN -8.76 CAVG -0.07 CMAX 0.93 +403: LSD 21.00 +403: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.001 s ] +403: CMIN -35.44 CAVG -0.29 CMAX 3.78 +403: LSD 85.00 +403: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.001 s ] +403: CMIN -126.28 CAVG -0.93 CMAX 14.98 +403: LSD 199.65 +403: [2] xf_out->m_type = 9, xf_in->m_type = 0 +403: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +403: bspline_xform_initialize +403: rdims = (5,5,5) +403: vox_per_rgn = (8,8,8) +403: cdims = (8 8 8) +403: ** Registration worker thread finished. +403: Writing transformation ... +403: Warping... +403: Running: plm_warp_native +403: Converting input image... +403: Converting xform... +403: bspline_xform_initialize +403: rdims = (5,5,5) +403: vox_per_rgn = (8,8,8) +403: cdims = (8 8 8) +403: Creating output vf... +403: Creating output volume... +403: Running native warper... +403: bspline_warp complete. +403: Back convert to original type... +403: > Convert vf to itk +403: > Conversion complete. +403: plm_warp_native is complete. +403: Saving image... +403: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd +403: Saving vf... +403: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-vf.nrrd +403: Load: 0.0323899 +403: Run: 0.0368421 +403: Save: 0.147549 +403: Total: 0.216781 +403: Finished! +403: +403: STDERR: +403: Not an error 424: RETVAL: 0 424: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 424: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha @@ -11378,24 +11240,229 @@ 424: plm_warp_itk: warping... 424: Saving image... 424: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha -424: Load: 0.0424881 -424: Run: 0.0011189 -424: Save: 0.00594115 -424: Total: 0.0495481 +424: Load: 0.06127 +424: Run: 0.00154901 +424: Save: 0.00325894 +424: Total: 0.0660779 424: Finished! 424: 424: STDERR: 424: Not an error -133/578 Test #424: plm-reg-process-a ..................... Passed 0.49 sec -test 462 - Start 462: plm-resample-c +130/578 Test #403: plm-bsp-dcos-e ........................ Passed 0.47 sec +131/578 Test #415: plm-reg-dv-itk-translation ............ Passed 0.35 sec +132/578 Test #424: plm-reg-process-a ..................... Passed 0.23 sec +test 436 + Start 436: plm-reg-autores-a -462: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -462: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -462: Test timeout computed to be: 1500 -462: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -462: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha -462: EXPECTED_ERRNO is +436: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +436: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +436: Test timeout computed to be: 1500 +test 439 + Start 439: plm-reg-autores-b + +439: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +439: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +439: Test timeout computed to be: 1500 +test 444 + Start 444: plm-compose-a + +444: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +444: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +444: Test timeout computed to be: 1500 +436: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +436: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt +436: EXPECTED_ERRNO is +439: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +439: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt +439: EXPECTED_ERRNO is +406: RETVAL: 0 +406: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha +406: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +406: Launching registration worker thread +406: Inside registration worker thread +406: Doing registration stage +406: [1] xf_in->m_type = 0, xf_out->m_type = 0 +406: RESAMPLE 1 1: (2 2 2), (2 2 2) +406: RESAMPLE 1 1: (2 2 2), (2 2 2) +406: volume_calc_grad complete. +406: bspline_xform_initialize +406: Warning: vox_per_rgn was less than 4. +406: Warning: vox_per_rgn was less than 4. +406: Warning: vox_per_rgn was less than 4. +406: rdims = (5,5,5) +406: vox_per_rgn = (4,4,4) +406: cdims = (8 8 8) +406: Algorithm flavor = h +406: Threading = 0 +406: >> Checking JH allocation +406: BSPLINE PARMS +406: max_its = 5 +406: max_feval = 5 +406: BSPLINE XFORM HEADER +406: vox_per_rgn = 4 4 4 +406: roi_offset = 0 0 0 +406: roi_dim = 19 19 19 +406: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 +406: BST METRICS +406: MET 110100 MSE 1.000000 +406: Setting nmax, mmax = 1536 41 +406: >>> START +406: This problem is unconstrained. +406: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.008 s ] +406: CMIN 0.00 CAVG 0.00 CMAX 0.00 +406: LSD 0.00 +406: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.001 s ] +406: CMIN -0.09 CAVG 0.00 CMAX 0.49 +406: LSD 1.00 +406: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.001 s ] +406: CMIN -0.46 CAVG 0.01 CMAX 2.46 +406: LSD 5.00 +406: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.001 s ] +406: CMIN -1.93 CAVG 0.04 CMAX 10.33 +406: LSD 21.00 +406: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.001 s ] +406: CMIN -14.50 CAVG 0.20 CMAX 61.00 +406: LSD 95.90 +406: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.001 s ] +406: CMIN -12.15 CAVG 0.16 CMAX 47.74 +406: LSD 26.24 +406: [2] xf_out->m_type = 9, xf_in->m_type = 0 +406: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +406: bspline_xform_initialize +406: rdims = (5,5,5) +406: vox_per_rgn = (8,8,8) +406: cdims = (8 8 8) +406: ** Registration worker thread finished. +406: Writing transformation ... +406: Warping... +406: Running: plm_warp_native +406: Converting input image... +406: Converting xform... +406: bspline_xform_initialize +406: rdims = (5,5,5) +406: vox_per_rgn = (8,8,8) +406: cdims = (8 8 8) +406: Creating output vf... +406: Creating output volume... +406: Running native warper... +406: bspline_warp complete. +406: Back convert to original type... +406: > Convert vf to itk +406: > Conversion complete. +406: plm_warp_native is complete. +406: Saving image... +406: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd +406: Saving vf... +406: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-vf.nrrd +406: Load: 0.0588381 +406: Run: 0.033349 +406: Save: 0.11475 +406: Total: 0.206937 +406: Finished! +406: +406: STDERR: +406: Not an error +133/578 Test #406: plm-bsp-dcos-f ........................ Passed 0.46 sec +test 448 + Start 448: plm-compose-b + +448: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +448: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +448: Test timeout computed to be: 1500 +448: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +448: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha +448: EXPECTED_ERRNO is +409: RETVAL: 0 +409: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +409: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha +409: Launching registration worker thread +409: Inside registration worker thread +409: Doing registration stage +409: [1] xf_in->m_type = 0, xf_out->m_type = 0 +409: Fixed image for this stage: +409: Dim = 19 19 19 +409: Origin = -236.842 -236.842 -236.842 +409: Spacing = 26.3158 26.3158 26.3158 +409: Direction Cosines = +409: 1 0 0 +409: 0 1 0 +409: 0 0 1 +409: Moving image for this stage: +409: Dim = 19 19 19 +409: Origin = -236.842 -236.842 -236.842 +409: Spacing = 26.3158 26.3158 26.3158 +409: Direction Cosines = +409: 1 0 0 +409: 0 1 0 +409: 0 0 1 +409: Initial Parameters = [0, 0, 0, 0, 0, 0] +409: Starting ITK registration +409: StartEvent: [0, 0, 0, 0, 0, 0] +409: MSE [ 0, 0,10.00] 2961.438 [1.5937427139384403e-23, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999996, -3.916782093775119e-15, -4.177900900026794e-15] +409: :: [0, 0, 0, 0, 0, 0] +409: * +409: MSE [ 1, 1,10.00] 2086.091 [-2.2899249183270948e-18, -3.349986047567983e-7, 3.3499860572135157e-7, -19.999999999999872, -9.942357105408222e-7, -9.942357096917045e-7] -875.35 +409: :: [1.5937427139384403e-23, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999996, -3.916782093775119e-15, -4.177900900026794e-15] +409: * +409: MSE [ 2, 2, 5.00] 1944.674 [-2.4151546575091274e-17, -0.000002038776367823306, 0.0000020387763875273003, -15.000000000094076, -0.000022427961016997613, -0.00002242796096565782] -141.42 +409: :: [-2.2899249183270948e-18, -3.349986047567983e-7, 3.3499860572135157e-7, -19.999999999999872, -9.942357105408222e-7, -9.942357096917045e-7] +409: * +409: MSE [ 3, 3, 2.50] 1989.993 [-1.292065732385147e-16, -0.00000825398461951269, 0.000008253984726235724, -17.499999999592845, -0.000055572556918867714, -0.00005557255639553352] 45.32 +409: MSE [ 4, 4, 2.50] 1946.484 [-2.6328836927304168e-14, -0.0010533617729022483, 0.0010533617928150964, -19.999966305224685, -0.00899237004548959, -0.00899236992115818] -43.51 +409: EndEvent: [-2.6328836927304168e-14, -0.0010533617729022483, 0.0010533617928150964, -19.999966305224685, -0.00899237004548959, -0.00899236992115818] +409: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. +409: ITK registration complete +409: [2] xf_out->m_type = 2, xf_in->m_type = 0 +409: Warping... +409: plm_warp_itk: xform_to_itk_vf +409: plm_warp_itk: convert_to_itk +409: plm_warp_itk: warping... +409: Saving image... +409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stage-1.mha +409: Doing registration stage +409: [1] xf_in->m_type = 2, xf_out->m_type = 0 +409: SUBSAMPLE: (1 1 1), (1 1 1) +409: volume_calc_grad complete. +409: kerx: 0.0000000000 1.0000000000 0.0000000000 +409: kery: 0.0000000000 1.0000000000 0.0000000000 +409: kerz: 0.0000000000 1.0000000000 0.0000000000 +409: MSE [ 0] 4770.7 (0.947) [ 0.012 secs] +409: MSE [ 1] 4770.7 (0.947) [ 0.004 secs] +409: MSE [ 2] 4770.7 (0.947) [ 0.007 secs] +409: MSE [ 3] 4770.7 (0.947) [ 0.004 secs] +409: MSE [ 4] 4770.7 (0.947) [ 0.004 secs] +409: Time for 5 iterations = 0.030955 (0.006191 sec / it) +409: [2] xf_out->m_type = 10, xf_in->m_type = 2 +409: ** Registration worker thread finished. +409: Warping... +409: plm_warp_itk: xform_to_itk_vf +409: plm_warp_itk: convert_to_itk +409: plm_warp_itk: warping... +409: Saving image... +409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-img.nrrd +409: Saving vf... +409: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd +409: Load: 0.018496 +409: Run: 0.0536311 +409: Save: 0.0138209 +409: Total: 0.085948 +409: Finished! +409: +409: STDERR: +409: Not an error +134/578 Test #409: plm-reg-multi-a ....................... Passed 0.51 sec +test 452 + Start 452: plm-compose-c + +452: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +452: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +452: Test timeout computed to be: 1500 +444: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +444: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha +444: EXPECTED_ERRNO is +452: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +452: PARMS is compose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha +452: EXPECTED_ERRNO is 372: RETVAL: 0 372: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 372: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha @@ -11431,28 +11498,28 @@ 372: Setting nmax, mmax = 6591 83 372: >>> START 372: This problem is unconstrained. -372: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.206 s ] -372: MSE 5540.166 RM 0.000 [ 0.113 | 0.092 ] +372: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.154 s ] +372: MSE 5540.166 RM 0.000 [ 0.050 | 0.104 ] 372: CMIN 0.00 CAVG 0.00 CMAX 0.00 372: LSD 0.00 -372: [ 0, 1] SCORE 5484.176 NV 54872 GM 0.045 GN 27.7 [ 0.159 s ] -372: MSE 5484.124 RM 0.052 [ 0.055 | 0.104 ] +372: [ 0, 1] SCORE 5484.176 NV 54872 GM 0.045 GN 27.7 [ 0.152 s ] +372: MSE 5484.124 RM 0.052 [ 0.040 | 0.112 ] 372: CMIN -0.16 CAVG -0.00 CMAX 0.22 372: LSD 1.00 -372: [ 0, 2] SCORE 5267.543 NV 54872 GM 0.224 GN 25.9 [ 0.192 s ] -372: MSE 5266.236 RM 1.307 [ 0.048 | 0.144 ] +372: [ 0, 2] SCORE 5267.543 NV 54872 GM 0.224 GN 25.9 [ 0.172 s ] +372: MSE 5266.236 RM 1.307 [ 0.054 | 0.118 ] 372: CMIN -0.81 CAVG 0.00 CMAX 1.12 372: LSD 5.00 -372: [ 0, 3] SCORE 4507.597 NV 54872 GM 0.928 GN 18.7 [ 0.224 s ] -372: MSE 4484.536 RM 23.060 [ 0.060 | 0.164 ] +372: [ 0, 3] SCORE 4507.597 NV 54872 GM 0.928 GN 18.7 [ 0.100 s ] +372: MSE 4484.536 RM 23.060 [ 0.028 | 0.072 ] 372: CMIN -3.39 CAVG 0.00 CMAX 4.70 372: LSD 21.00 -372: [ 1, 4] SCORE 3149.129 NV 54872 GM 4.968 GN 2.36 [ 0.147 s ] -372: MSE 2955.678 RM 193.451 [ 0.051 | 0.096 ] +372: [ 1, 4] SCORE 3149.129 NV 54872 GM 4.968 GN 2.36 [ 0.119 s ] +372: MSE 2955.678 RM 193.451 [ 0.028 | 0.091 ] 372: CMIN -10.06 CAVG -0.00 CMAX 13.65 372: LSD 42.53 -372: [ 2, 5] SCORE 3079.150 NV 54872 GM -1.061 GN 2.72 [ 0.095 s ] -372: MSE 2880.344 RM 198.806 [ 0.035 | 0.060 ] +372: [ 2, 5] SCORE 3079.150 NV 54872 GM -1.061 GN 2.72 [ 0.111 s ] +372: MSE 2880.344 RM 198.806 [ 0.025 | 0.086 ] 372: CMIN -10.75 CAVG -0.00 CMAX 13.43 372: LSD 6.23 372: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -11478,31 +11545,323 @@ 372: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-img.mha 372: Saving vf... 372: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha -372: Load: 0.128952 -372: Run: 1.04683 -372: Save: 0.0481639 -372: Total: 1.22395 +372: Load: 0.0593159 +372: Run: 0.840961 +372: Save: 0.061332 +372: Total: 0.961609 372: Finished! 372: 372: STDERR: 372: Not an error -134/578 Test #372: plm-bsp-regularize-analytic ........... Passed 1.67 sec -test 465 - Start 465: plm-scale-a +135/578 Test #372: plm-bsp-regularize-analytic ........... Passed 1.41 sec +test 456 + Start 456: plm-resample-a -465: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=scale;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -465: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -465: Test timeout computed to be: 1500 -465: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -465: PARMS is scale;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha -465: EXPECTED_ERRNO is +456: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +456: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +456: Test timeout computed to be: 1500 +456: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +456: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2 +456: EXPECTED_ERRNO is +448: RETVAL: 0 +448: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha +448: Finished! +448: +448: STDERR: +448: Not an error +136/578 Test #448: plm-compose-b ......................... Passed 0.14 sec +test 459 + Start 459: plm-resample-b + +459: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +459: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +459: Test timeout computed to be: 1500 +459: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +459: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha +459: EXPECTED_ERRNO is 444: RETVAL: 0 444: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha 444: Finished! 444: 444: STDERR: 444: Not an error -135/578 Test #444: plm-compose-a ......................... Passed 0.31 sec +137/578 Test #444: plm-compose-a ......................... Passed 0.20 sec +test 462 + Start 462: plm-resample-c + +462: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +462: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +462: Test timeout computed to be: 1500 +462: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +462: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha +462: EXPECTED_ERRNO is +439: RETVAL: 0 +439: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +439: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +439: Launching registration worker thread +439: Inside registration worker thread +439: Doing registration stage +439: [1] xf_in->m_type = 0, xf_out->m_type = 0 +439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) +439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) +439: volume_calc_grad complete. +439: Computing grid search extent. +439: Dimension 0, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) +439: Dimension 1, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) +439: Dimension 2, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) +439: Native grid search extent: (-10.2493, 10.2493), (-10.2493, 10.2493), (-10.2493, 10.2493) +439: [0 0 0] 17568.3 * +439: Global grid search +439: [-10.2493 -10.2493 -10.2493] 102040 +439: [-6.14958 -10.2493 -10.2493] 87035.1 +439: [-2.04986 -10.2493 -10.2493] 73504.3 +439: [2.04986 -10.2493 -10.2493] 61973.2 +439: [6.14958 -10.2493 -10.2493] 57083.1 +439: [10.2493 -10.2493 -10.2493] 60324.8 +439: [-10.2493 -6.14958 -10.2493] 86358.6 +439: [-6.14958 -6.14958 -10.2493] 71329.7 +439: [-2.04986 -6.14958 -10.2493] 57402.6 +439: [2.04986 -6.14958 -10.2493] 45155 +439: [6.14958 -6.14958 -10.2493] 38807.6 +439: [10.2493 -6.14958 -10.2493] 39786.3 +439: [-10.2493 -2.04986 -10.2493] 79223.6 +439: [-6.14958 -2.04986 -10.2493] 64102 +439: [-2.04986 -2.04986 -10.2493] 49890.5 +439: [2.04986 -2.04986 -10.2493] 37200.4 +439: [6.14958 -2.04986 -10.2493] 30089.3 +439: [10.2493 -2.04986 -10.2493] 29962.9 +439: [-10.2493 2.04986 -10.2493] 79216.3 +439: [-6.14958 2.04986 -10.2493] 64097.4 +439: [-2.04986 2.04986 -10.2493] 49887.5 +439: [2.04986 2.04986 -10.2493] 37198.2 +439: [6.14958 2.04986 -10.2493] 30087.7 +439: [10.2493 2.04986 -10.2493] 29961.4 +439: [-10.2493 6.14958 -10.2493] 86370.3 +439: [-6.14958 6.14958 -10.2493] 71349.9 +439: [-2.04986 6.14958 -10.2493] 57424.9 +439: [2.04986 6.14958 -10.2493] 45174.8 +439: [6.14958 6.14958 -10.2493] 38826.9 +439: [10.2493 6.14958 -10.2493] 39808.1 +439: [-10.2493 10.2493 -10.2493] 101908 +439: [-6.14958 10.2493 -10.2493] 86978.3 +439: [-2.04986 10.2493 -10.2493] 73484.1 +439: [2.04986 10.2493 -10.2493] 61959.1 +439: [6.14958 10.2493 -10.2493] 57074.3 +439: [10.2493 10.2493 -10.2493] 60322.2 +439: [-10.2493 -10.2493 -6.14958] 86358.6 +439: [-6.14958 -10.2493 -6.14958] 71329.7 +439: [-2.04986 -10.2493 -6.14958] 57402.6 +439: [2.04986 -10.2493 -6.14958] 45155 +439: [6.14958 -10.2493 -6.14958] 38807.6 +439: [10.2493 -10.2493 -6.14958] 39786.3 +439: [-10.2493 -6.14958 -6.14958] 72037.7 +439: [-6.14958 -6.14958 -6.14958] 56910.4 +439: [-2.04986 -6.14958 -6.14958] 42538.4 +439: [2.04986 -6.14958 -6.14958] 29552 +439: [6.14958 -6.14958 -6.14958] 21798.9 +439: [10.2493 -6.14958 -6.14958] 20651.8 +439: [-10.2493 -2.04986 -6.14958] 65471 +439: [-6.14958 -2.04986 -6.14958] 50210.2 +439: [-2.04986 -2.04986 -6.14958] 35524.7 +439: [2.04986 -2.04986 -6.14958] 22079 +439: [6.14958 -2.04986 -6.14958] 13577.1 * +439: [10.2493 -2.04986 -6.14958] 11376 * +439: [-10.2493 2.04986 -6.14958] 65464.7 +439: [-6.14958 2.04986 -6.14958] 50206.4 +439: [-2.04986 2.04986 -6.14958] 35522.4 +439: [2.04986 2.04986 -6.14958] 22077.6 +439: [6.14958 2.04986 -6.14958] 13576.2 +439: [10.2493 2.04986 -6.14958] 11375.4 * +439: [-10.2493 6.14958 -6.14958] 72046.3 +439: [-6.14958 6.14958 -6.14958] 56926.2 +439: [-2.04986 6.14958 -6.14958] 42555.4 +439: [2.04986 6.14958 -6.14958] 29566.2 +439: [6.14958 6.14958 -6.14958] 21812 +439: [10.2493 6.14958 -6.14958] 20666.5 +439: [-10.2493 10.2493 -6.14958] 86238.7 +439: [-6.14958 10.2493 -6.14958] 71277.5 +439: [-2.04986 10.2493 -6.14958] 57383.1 +439: [2.04986 10.2493 -6.14958] 45141 +439: [6.14958 10.2493 -6.14958] 38798.2 +439: [10.2493 10.2493 -6.14958] 39782.4 +439: [-10.2493 -10.2493 -2.04986] 79223.6 +439: [-6.14958 -10.2493 -2.04986] 64102 +439: [-2.04986 -10.2493 -2.04986] 49890.5 +439: [2.04986 -10.2493 -2.04986] 37200.4 +439: [6.14958 -10.2493 -2.04986] 30089.3 +439: [10.2493 -10.2493 -2.04986] 29962.9 +439: [-10.2493 -6.14958 -2.04986] 65471 +439: [-6.14958 -6.14958 -2.04986] 50210.2 +439: [-2.04986 -6.14958 -2.04986] 35524.7 +439: [2.04986 -6.14958 -2.04986] 22079 +439: [6.14958 -6.14958 -2.04986] 13577.1 +439: [10.2493 -6.14958 -2.04986] 11376 +439: [-10.2493 -2.04986 -2.04986] 59138.3 +439: [-6.14958 -2.04986 -2.04986] 43721.4 +439: [-2.04986 -2.04986 -2.04986] 28705.1 +439: [2.04986 -2.04986 -2.04986] 14788.4 +439: [6.14958 -2.04986 -2.04986] 5539.07 * +439: [10.2493 -2.04986 -2.04986] 2301.37 * +439: [-10.2493 2.04986 -2.04986] 59132.6 +439: [-6.14958 2.04986 -2.04986] 43718 +439: [-2.04986 2.04986 -2.04986] 28703.3 +439: [2.04986 2.04986 -2.04986] 14787.4 +439: [6.14958 2.04986 -2.04986] 5538.67 +439: [10.2493 2.04986 -2.04986] 2301.27 * +439: [-10.2493 6.14958 -2.04986] 65478.6 +439: [-6.14958 6.14958 -2.04986] 50224.3 +439: [-2.04986 6.14958 -2.04986] 35539.7 +439: [2.04986 6.14958 -2.04986] 22091 +439: [6.14958 6.14958 -2.04986] 13587.7 +439: [10.2493 6.14958 -2.04986] 11387.8 +439: [-10.2493 10.2493 -2.04986] 79111.5 +439: [-6.14958 10.2493 -2.04986] 64054.3 +439: [-2.04986 10.2493 -2.04986] 49873.8 +439: [2.04986 10.2493 -2.04986] 37188.9 +439: [6.14958 10.2493 -2.04986] 30082.5 +439: [10.2493 10.2493 -2.04986] 29961.4 +439: [-10.2493 -10.2493 2.04986] 79216.3 +439: [-6.14958 -10.2493 2.04986] 64097.4 +439: [-2.04986 -10.2493 2.04986] 49887.5 +439: [2.04986 -10.2493 2.04986] 37198.2 +439: [6.14958 -10.2493 2.04986] 30087.7 +439: [10.2493 -10.2493 2.04986] 29961.4 +439: [-10.2493 -6.14958 2.04986] 65464.7 +439: [-6.14958 -6.14958 2.04986] 50206.4 +439: [-2.04986 -6.14958 2.04986] 35522.4 +439: [2.04986 -6.14958 2.04986] 22077.6 +439: [6.14958 -6.14958 2.04986] 13576.2 +439: [10.2493 -6.14958 2.04986] 11375.4 +439: [-10.2493 -2.04986 2.04986] 59132.6 +439: [-6.14958 -2.04986 2.04986] 43718 +439: [-2.04986 -2.04986 2.04986] 28703.3 +439: [2.04986 -2.04986 2.04986] 14787.4 +439: [6.14958 -2.04986 2.04986] 5538.67 +439: [10.2493 -2.04986 2.04986] 2301.27 * +439: [-10.2493 2.04986 2.04986] 59126.8 +439: [-6.14958 2.04986 2.04986] 43714.7 +439: [-2.04986 2.04986 2.04986] 28701.5 +439: [2.04986 2.04986 2.04986] 14786.4 +439: [6.14958 2.04986 2.04986] 5538.27 +439: [10.2493 2.04986 2.04986] 2301.18 * +439: [-10.2493 6.14958 2.04986] 65472.3 +439: [-6.14958 6.14958 2.04986] 50220.5 +439: [-2.04986 6.14958 2.04986] 35537.5 +439: [2.04986 6.14958 2.04986] 22089.6 +439: [6.14958 6.14958 2.04986] 13586.9 +439: [10.2493 6.14958 2.04986] 11387.2 +439: [-10.2493 10.2493 2.04986] 79104.4 +439: [-6.14958 10.2493 2.04986] 64049.8 +439: [-2.04986 10.2493 2.04986] 49870.9 +439: [2.04986 10.2493 2.04986] 37186.9 +439: [6.14958 10.2493 2.04986] 30080.9 +439: [10.2493 10.2493 2.04986] 29960.1 +439: [-10.2493 -10.2493 6.14958] 86370.3 +439: [-6.14958 -10.2493 6.14958] 71349.9 +439: [-2.04986 -10.2493 6.14958] 57424.9 +439: [2.04986 -10.2493 6.14958] 45174.8 +439: [6.14958 -10.2493 6.14958] 38826.9 +439: [10.2493 -10.2493 6.14958] 39808.1 +439: [-10.2493 -6.14958 6.14958] 72046.3 +439: [-6.14958 -6.14958 6.14958] 56926.2 +439: [-2.04986 -6.14958 6.14958] 42555.4 +439: [2.04986 -6.14958 6.14958] 29566.2 +439: [6.14958 -6.14958 6.14958] 21812 +439: [10.2493 -6.14958 6.14958] 20666.5 +439: [-10.2493 -2.04986 6.14958] 65478.6 +439: [-6.14958 -2.04986 6.14958] 50224.3 +439: [-2.04986 -2.04986 6.14958] 35539.7 +439: [2.04986 -2.04986 6.14958] 22091 +439: [6.14958 -2.04986 6.14958] 13587.7 +439: [10.2493 -2.04986 6.14958] 11387.8 +439: [-10.2493 2.04986 6.14958] 65472.4 +439: [-6.14958 2.04986 6.14958] 50220.5 +439: [-2.04986 2.04986 6.14958] 35537.5 +439: [2.04986 2.04986 6.14958] 22089.6 +439: [6.14958 2.04986 6.14958] 13586.9 +439: [10.2493 2.04986 6.14958] 11387.2 +439: [-10.2493 6.14958 6.14958] 72055.1 +439: [-6.14958 6.14958 6.14958] 56942.1 +439: [-2.04986 6.14958 6.14958] 42572.7 +439: [2.04986 6.14958 6.14958] 29580.5 +439: [6.14958 6.14958 6.14958] 21825.4 +439: [10.2493 6.14958 6.14958] 20681.4 +439: [-10.2493 10.2493 6.14958] 86251.4 +439: [-6.14958 10.2493 6.14958] 71298.8 +439: [-2.04986 10.2493 6.14958] 57406.5 +439: [2.04986 10.2493 6.14958] 45161.9 +439: [6.14958 10.2493 6.14958] 38818.7 +439: [10.2493 10.2493 6.14958] 39805.5 +439: [-10.2493 -10.2493 10.2493] 101908 +439: [-6.14958 -10.2493 10.2493] 86978.3 +439: [-2.04986 -10.2493 10.2493] 73484.1 +439: [2.04986 -10.2493 10.2493] 61959.1 +439: [6.14958 -10.2493 10.2493] 57074.3 +439: [10.2493 -10.2493 10.2493] 60322.2 +439: [-10.2493 -6.14958 10.2493] 86238.7 +439: [-6.14958 -6.14958 10.2493] 71277.5 +439: [-2.04986 -6.14958 10.2493] 57383.1 +439: [2.04986 -6.14958 10.2493] 45141 +439: [6.14958 -6.14958 10.2493] 38798.2 +439: [10.2493 -6.14958 10.2493] 39782.4 +439: [-10.2493 -2.04986 10.2493] 79111.5 +439: [-6.14958 -2.04986 10.2493] 64054.3 +439: [-2.04986 -2.04986 10.2493] 49873.8 +439: [2.04986 -2.04986 10.2493] 37188.9 +439: [6.14958 -2.04986 10.2493] 30082.5 +439: [10.2493 -2.04986 10.2493] 29961.4 +439: [-10.2493 2.04986 10.2493] 79104.4 +439: [-6.14958 2.04986 10.2493] 64049.8 +439: [-2.04986 2.04986 10.2493] 49870.9 +439: [2.04986 2.04986 10.2493] 37186.9 +439: [6.14958 2.04986 10.2493] 30081 +439: [10.2493 2.04986 10.2493] 29960.1 +439: [-10.2493 6.14958 10.2493] 86251.4 +439: [-6.14958 6.14958 10.2493] 71298.8 +439: [-2.04986 6.14958 10.2493] 57406.5 +439: [2.04986 6.14958 10.2493] 45161.9 +439: [6.14958 6.14958 10.2493] 38818.7 +439: [10.2493 6.14958 10.2493] 39805.5 +439: [-10.2493 10.2493 10.2493] 101782 +439: [-6.14958 10.2493 10.2493] 86927.9 +439: [-2.04986 10.2493 10.2493] 73469.9 +439: [2.04986 10.2493 10.2493] 61951.1 +439: [6.14958 10.2493 10.2493] 57072 +439: [10.2493 10.2493 10.2493] 60327 +439: [2] xf_out->m_type = 1, xf_in->m_type = 0 +439: ** Registration worker thread finished. +439: Warping... +439: plm_warp_itk: xform_to_itk_vf +439: plm_warp_itk: convert_to_itk +439: plm_warp_itk: warping... +439: Saving image... +439: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha +439: Load: 0.0217049 +439: Run: 0.0653372 +439: Save: 0.00435996 +439: Total: 0.0914021 +439: Finished! +439: +439: STDERR: +439: Not an error +138/578 Test #439: plm-reg-autores-b ..................... Passed 0.24 sec +test 465 + Start 465: plm-scale-a + +465: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=scale;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +465: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +465: Test timeout computed to be: 1500 +452: RETVAL: 0 +452: STDOUT: bspline_xform_initialize +452: rdims = (2,2,2) +452: vox_per_rgn = (22,22,22) +452: cdims = (5 5 5) +452: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha +452: Finished! +452: +452: STDERR: +452: Not an error +139/578 Test #452: plm-compose-c ......................... Passed 0.16 sec test 468 Start 468: plm-scale-vf-a @@ -11512,86 +11871,6 @@ 468: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 468: PARMS is scale;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 468: EXPECTED_ERRNO is -415: RETVAL: 0 -415: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -415: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -415: Launching registration worker thread -415: Inside registration worker thread -415: Doing registration stage -415: [1] xf_in->m_type = 0, xf_out->m_type = 0 -415: Fixed image for this stage: -415: Dim = 19 19 19 -415: Origin = -24.3421 -24.3421 -24.3421 -415: Spacing = 2.63158 2.63158 2.63158 -415: Direction Cosines = -415: 1 0 0 -415: 0 1 0 -415: 0 0 1 -415: Moving image for this stage: -415: Dim = 19 19 19 -415: Origin = -24.3421 -24.3421 -24.3421 -415: Spacing = 2.63158 2.63158 2.63158 -415: Direction Cosines = -415: 1 0 0 -415: 0 1 0 -415: 0 0 1 -415: Initial Parameters = [0, 0, 0] -415: Starting ITK registration -415: StartEvent: [0, 0, 0] -415: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987453, -0.004883617032986772] -415: :: [0, 0, 0] -415: * -415: MSE [ 1, 1, 5.00] 1.116 [5.318441699151488, 1.2366948554205894, 1.2366948554204342] -18755.12 -415: :: [9.999997615028182, -0.004883617032987453, -0.004883617032986772] -415: * -415: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085816, 0.5310844064631238, 0.5310844064630558] 5543.49 -415: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442492, -0.07045474975050436, -0.0704547497504936] -4090.90 -415: MSE [ 4, 4, 1.25] 4.252 [10.13062237366743, 0.805297580935725, 0.8052975809356303] -1449.45 -415: EndEvent: [10.13062237366743, 0.805297580935725, 0.8052975809356303] -415: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. -415: ITK registration complete -415: [2] xf_out->m_type = 1, xf_in->m_type = 0 -415: ** Registration worker thread finished. -415: Writing transformation ... -415: Warping... -415: plm_warp_itk: xform_to_itk_vf -415: plm_warp_itk: convert_to_itk -415: plm_warp_itk: warping... -415: Saving image... -415: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd -415: Saving vf... -415: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-vf.nrrd -415: Load: 0.0679801 -415: Run: 0.0479581 -415: Save: 0.049511 -415: Total: 0.165449 -415: Finished! -415: -415: STDERR: -415: Not an error -136/578 Test #415: plm-reg-dv-itk-translation ............ Passed 0.84 sec -test 474 - Start 474: plm-thumbnail-a - -474: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -474: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -474: Test timeout computed to be: 1500 -448: RETVAL: 0 -448: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha -448: Finished! -448: -448: STDERR: -448: Not an error -137/578 Test #448: plm-compose-b ......................... Passed 0.26 sec -test 477 - Start 477: plm-thumbnail-b - -477: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -477: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -477: Test timeout computed to be: 1500 -474: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -474: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2 -474: EXPECTED_ERRNO is 436: RETVAL: 0 436: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 436: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -11833,15 +12112,46 @@ 436: plm_warp_itk: warping... 436: Saving image... 436: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha -436: Load: 0.0344591 -436: Run: 0.064791 -436: Save: 0.00740004 -436: Total: 0.10665 +436: Load: 0.031404 +436: Run: 0.0873909 +436: Save: 0.00318098 +436: Total: 0.121976 436: Finished! 436: 436: STDERR: 436: Not an error -138/578 Test #436: plm-reg-autores-a ..................... Passed 0.47 sec +140/578 Test #436: plm-reg-autores-a ..................... Passed 0.30 sec +test 474 + Start 474: plm-thumbnail-a + +474: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +474: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +474: Test timeout computed to be: 1500 +465: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +465: PARMS is scale;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha +465: EXPECTED_ERRNO is +474: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +474: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2 +474: EXPECTED_ERRNO is +456: RETVAL: 0 +456: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha +456: +456: STDERR: +456: Not an error +459: RETVAL: 0 +459: STDOUT: Time = 0.001201 seconds +459: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha +459: +459: STDERR: +459: Not an error +141/578 Test #456: plm-resample-a ........................ Passed 0.20 sec +test 477 + Start 477: plm-thumbnail-b + +477: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +477: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +477: Test timeout computed to be: 1500 +142/578 Test #459: plm-resample-b ........................ Passed 0.16 sec test 480 Start 480: plm-thumbnail-c @@ -11854,12 +12164,12 @@ 480: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 480: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png;--spacing;2;--auto-adjust 480: EXPECTED_ERRNO is -456: RETVAL: 0 -456: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha -456: -456: STDERR: -456: Not an error -139/578 Test #456: plm-resample-a ........................ Passed 0.33 sec +468: RETVAL: 0 +468: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd +468: +468: STDERR: +468: Not an error +143/578 Test #468: plm-scale-vf-a ........................ Passed 0.13 sec test 483 Start 483: plm-intersect @@ -11869,40 +12179,45 @@ 483: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 483: PARMS is intersect;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 483: EXPECTED_ERRNO is -468: RETVAL: 0 -468: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd -468: -468: STDERR: -468: Not an error -140/578 Test #468: plm-scale-vf-a ........................ Passed 0.20 sec +462: RETVAL: 0 +462: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha +462: +462: STDERR: +462: Not an error +144/578 Test #462: plm-resample-c ........................ Passed 0.23 sec test 486 Start 486: plm-union 486: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-union" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=union;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 486: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 486: Test timeout computed to be: 1500 -486: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -486: PARMS is union;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha -486: EXPECTED_ERRNO is -465: RETVAL: 0 -465: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd -465: -465: STDERR: -465: Not an error -141/578 Test #465: plm-scale-a ........................... Passed 0.34 sec +474: RETVAL: 0 +474: STDOUT: Time = 0.000131 seconds +474: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png +474: +474: STDERR: +474: Not an error +145/578 Test #474: plm-thumbnail-a ....................... Passed 0.15 sec test 489 Start 489: plm-threshold-a 489: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha;--above;-888" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 489: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 489: Test timeout computed to be: 1500 -474: RETVAL: 0 -474: STDOUT: Time = 0.000176 seconds -474: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png -474: -474: STDERR: -474: Not an error -142/578 Test #474: plm-thumbnail-a ....................... Passed 0.25 sec +489: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +489: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha;--above;-888 +489: EXPECTED_ERRNO is +486: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +486: PARMS is union;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha +486: EXPECTED_ERRNO is +480: RETVAL: 0 +480: STDOUT: Time = 0.000189 seconds +480: Auto-adjusting intensities... +480: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png +480: +480: STDERR: +480: Not an error +146/578 Test #480: plm-thumbnail-c ....................... Passed 0.20 sec test 492 Start 492: plm-threshold-b @@ -11910,1185 +12225,434 @@ 492: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 492: Test timeout computed to be: 1500 477: RETVAL: 0 -477: STDOUT: Time = 0.000118 seconds +477: STDOUT: Time = 0.000168 seconds 477: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png 477: 477: STDERR: 477: Not an error -143/578 Test #477: plm-thumbnail-b ....................... Passed 0.26 sec +147/578 Test #477: plm-thumbnail-b ....................... Passed 0.22 sec test 495 Start 495: plm-threshold-c 495: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha;--range;-900,-888" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 495: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 495: Test timeout computed to be: 1500 -480: RETVAL: 0 -480: STDOUT: Time = 0.000150 seconds -480: Auto-adjusting intensities... -480: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png -480: -480: STDERR: -480: Not an error -144/578 Test #480: plm-thumbnail-c ....................... Passed 0.24 sec +492: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +492: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha;--below;-900 +492: EXPECTED_ERRNO is +427: RETVAL: 0 +427: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +427: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +427: Launching registration worker thread +427: Inside registration worker thread +427: Doing registration stage +427: [1] xf_in->m_type = 0, xf_out->m_type = 0 +427: RESAMPLE 1 1: (1 1 1), (1 1 1) +427: RESAMPLE 1 1: (1 1 1), (1 1 1) +427: volume_calc_grad complete. +427: Computing grid search extent. +427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) +427: [0 0 0] 18945.9 * +427: Global grid search +427: [-10 -10 -10] 109949 +427: [-6 -10 -10] 96800 +427: [-2 -10 -10] 79011.9 +427: [2 -10 -10] 66244.1 +427: [6 -10 -10] 61932.6 +427: [10 -10 -10] 63642.7 +427: [-10 -6 -10] 95633.9 +427: [-6 -6 -10] 81703.4 +427: [-2 -6 -10] 63642.4 +427: [2 -6 -10] 49838.6 +427: [6 -6 -10] 43366.8 +427: [10 -6 -10] 43154 +427: [-10 -2 -10] 84842.6 +427: [-6 -2 -10] 71049.9 +427: [-2 -2 -10] 53542.3 +427: [2 -2 -10] 39751 +427: [6 -2 -10] 32450.7 +427: [10 -2 -10] 31286.8 +427: [-10 2 -10] 84829.9 +427: [-6 2 -10] 71041.2 +427: [-2 2 -10] 53536.6 +427: [2 2 -10] 39746.7 +427: [6 2 -10] 32446.9 +427: [10 2 -10] 31283.5 +427: [-10 6 -10] 95561.4 +427: [-6 6 -10] 81658.4 +427: [-2 6 -10] 63613.3 +427: [2 6 -10] 49813.8 +427: [6 6 -10] 43342.5 +427: [10 6 -10] 43131.5 +427: [-10 10 -10] 109668 +427: [-6 10 -10] 96633.8 +427: [-2 10 -10] 78907 +427: [2 10 -10] 66152.1 +427: [6 10 -10] 61839.3 +427: [10 10 -10] 63556.7 +427: [-10 -10 -6] 95633.9 +427: [-6 -10 -6] 81703.4 +427: [-2 -10 -6] 63642.4 +427: [2 -10 -6] 49838.6 +427: [6 -10 -6] 43366.8 +427: [10 -10 -6] 43154 +427: [-10 -6 -6] 82028.8 +427: [-6 -6 -6] 67247.9 +427: [-2 -6 -6] 48818.3 +427: [2 -6 -6] 33916.9 +427: [6 -6 -6] 25278 +427: [10 -6 -6] 23165.8 +427: [-10 -2 -6] 72112.1 +427: [-6 -2 -6] 57467.9 +427: [-2 -2 -6] 39558.4 +427: [2 -2 -6] 24681.2 +427: [6 -2 -6] 15293.3 * +427: [10 -2 -6] 12314.7 * +427: [-10 2 -6] 72100.9 +427: [-6 2 -6] 57460.6 +427: [-2 2 -6] 39554 +427: [2 2 -6] 24678.2 +427: [6 2 -6] 15291.1 +427: [10 2 -6] 12313 * +427: [-10 6 -6] 81963.5 +427: [-6 6 -6] 67208.4 +427: [-2 6 -6] 48793.6 +427: [2 6 -6] 33896.7 +427: [6 6 -6] 25258.7 +427: [10 6 -6] 23148.6 +427: [-10 10 -6] 95379.4 +427: [-6 10 -6] 81554.8 +427: [-2 10 -6] 63550.9 +427: [2 10 -6] 49759.6 +427: [6 10 -6] 43287.7 +427: [10 10 -6] 43082.4 +427: [-10 -10 -2] 84842.6 +427: [-6 -10 -2] 71049.9 +427: [-2 -10 -2] 53542.3 +427: [2 -10 -2] 39751 +427: [6 -10 -2] 32450.7 +427: [10 -10 -2] 31286.8 +427: [-10 -6 -2] 72112.1 +427: [-6 -6 -2] 57467.9 +427: [-2 -6 -2] 39558.4 +427: [2 -6 -2] 24681.2 +427: [6 -6 -2] 15293.3 +427: [10 -6 -2] 12314.7 +427: [-10 -2 -2] 63010.9 +427: [-6 -2 -2] 48498.1 +427: [-2 -2 -2] 31072.4 +427: [2 -2 -2] 16224.1 +427: [6 -2 -2] 6155.79 * +427: [10 -2 -2] 2386.22 * +427: [-10 2 -2] 63000.9 +427: [-6 2 -2] 48491.8 +427: [-2 2 -2] 31068.8 +427: [2 2 -2] 16221.9 +427: [6 2 -2] 6154.44 +427: [10 2 -2] 2385.44 * +427: [-10 6 -2] 72052.8 +427: [-6 6 -2] 57432.4 +427: [-2 6 -2] 39536.8 +427: [2 6 -2] 24663.8 +427: [6 6 -2] 15277.1 +427: [10 6 -2] 12300.5 +427: [-10 10 -2] 84610.1 +427: [-6 10 -2] 70915.1 +427: [-2 10 -2] 53460.4 +427: [2 10 -2] 39681 +427: [6 10 -2] 32381 +427: [10 10 -2] 31224.4 +427: [-10 -10 2] 84829.9 +427: [-6 -10 2] 71041.2 +427: [-2 -10 2] 53536.6 +427: [2 -10 2] 39746.7 +427: [6 -10 2] 32446.9 +427: [10 -10 2] 31283.5 +427: [-10 -6 2] 72100.9 +427: [-6 -6 2] 57460.6 +427: [-2 -6 2] 39554 +427: [2 -6 2] 24678.2 +427: [6 -6 2] 15291.1 +427: [10 -6 2] 12313 +427: [-10 -2 2] 63000.9 +427: [-6 -2 2] 48491.8 +427: [-2 -2 2] 31068.8 +427: [2 -2 2] 16221.9 +427: [6 -2 2] 6154.44 +427: [10 -2 2] 2385.44 +427: [-10 2 2] 62990.9 +427: [-6 2 2] 48485.5 +427: [-2 2 2] 31065.2 +427: [2 2 2] 16219.7 +427: [6 2 2] 6153.1 +427: [10 2 2] 2384.66 * +427: [-10 6 2] 72041.7 +427: [-6 6 2] 57425.2 +427: [-2 6 2] 39532.4 +427: [2 6 2] 24660.8 +427: [6 6 2] 15274.9 +427: [10 6 2] 12298.9 +427: [-10 10 2] 84597.7 +427: [-6 10 2] 70906.7 +427: [-2 10 2] 53454.9 +427: [2 10 2] 39676.9 +427: [6 10 2] 32377.5 +427: [10 10 2] 31221.4 +427: [-10 -10 6] 95561.4 +427: [-6 -10 6] 81658.4 +427: [-2 -10 6] 63613.3 +427: [2 -10 6] 49813.8 +427: [6 -10 6] 43342.5 +427: [10 -10 6] 43131.5 +427: [-10 -6 6] 81963.5 +427: [-6 -6 6] 67208.4 +427: [-2 -6 6] 48793.6 +427: [2 -6 6] 33896.7 +427: [6 -6 6] 25258.7 +427: [10 -6 6] 23148.6 +427: [-10 -2 6] 72052.8 +427: [-6 -2 6] 57432.4 +427: [-2 -2 6] 39536.8 +427: [2 -2 6] 24663.8 +427: [6 -2 6] 15277.1 +427: [10 -2 6] 12300.5 +427: [-10 2 6] 72041.7 +427: [-6 2 6] 57425.2 +427: [-2 2 6] 39532.4 +427: [2 2 6] 24660.8 +427: [6 2 6] 15274.9 +427: [10 2 6] 12298.9 +427: [-10 6 6] 81898.9 +427: [-6 6 6] 67169.4 +427: [-2 6 6] 48769.5 +427: [2 6 6] 33876.9 +427: [6 6 6] 25240 +427: [10 6 6] 23132 +427: [-10 10 6] 95309.5 +427: [-6 10 6] 81512.3 +427: [-2 10 6] 63524.1 +427: [2 10 6] 49737.2 +427: [6 10 6] 43266 +427: [10 10 6] 43062.8 +427: [-10 -10 10] 109668 +427: [-6 -10 10] 96633.8 +427: [-2 -10 10] 78907 +427: [2 -10 10] 66152.1 +427: [6 -10 10] 61839.3 +427: [10 -10 10] 63556.7 +427: [-10 -6 10] 95379.4 +427: [-6 -6 10] 81554.8 +427: [-2 -6 10] 63550.9 +427: [2 -6 10] 49759.6 +427: [6 -6 10] 43287.7 +427: [10 -6 10] 43082.4 +427: [-10 -2 10] 84610.1 +427: [-6 -2 10] 70915.1 +427: [-2 -2 10] 53460.4 +427: [2 -2 10] 39681 +427: [6 -2 10] 32381 +427: [10 -2 10] 31224.4 +427: [-10 2 10] 84597.7 +427: [-6 2 10] 70906.7 +427: [-2 2 10] 53454.9 +427: [2 2 10] 39676.9 +427: [6 2 10] 32377.5 +427: [10 2 10] 31221.4 +427: [-10 6 10] 95309.5 +427: [-6 6 10] 81512.3 +427: [-2 6 10] 63524.1 +427: [2 6 10] 49737.2 +427: [6 6 10] 43266 +427: [10 6 10] 43062.8 +427: [-10 10 10] 109399 +427: [-6 10 10] 96478.4 +427: [-2 10 10] 78812.5 +427: [2 10 10] 66070.4 +427: [6 10 10] 61757.4 +427: [10 10 10] 63483 +427: [2] xf_out->m_type = 1, xf_in->m_type = 0 +427: [1] xf_in->m_type = 1, xf_out->m_type = 0 +427: RESAMPLE 1 1: (1 1 1), (1 1 1) +427: RESAMPLE 1 1: (1 1 1), (1 1 1) +427: volume_calc_grad complete. +427: Computing grid search extent. +427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) +427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) +427: [10 2 2] 2384.66 * +427: Local grid search +427: [6.4 -1.6 -1.6] 4439.65 +427: [8.8 -1.6 -1.6] 1771.35 * +427: [11.2 -1.6 -1.6] 1856.67 +427: [13.6 -1.6 -1.6] 4787.36 +427: [6.4 0.8 -1.6] 3954.1 +427: [8.8 0.8 -1.6] 1244.73 * +427: [11.2 0.8 -1.6] 1300.61 +427: [13.6 0.8 -1.6] 4226.79 +427: [6.4 3.2 -1.6] 6520.93 +427: [8.8 3.2 -1.6] 3949.58 +427: [11.2 3.2 -1.6] 4155.43 +427: [13.6 3.2 -1.6] 7178.92 +427: [6.4 5.6 -1.6] 12337.8 +427: [8.8 5.6 -1.6] 10089.9 +427: [11.2 5.6 -1.6] 10636.9 +427: [13.6 5.6 -1.6] 13872 +427: [6.4 -1.6 0.8] 3954.1 +427: [8.8 -1.6 0.8] 1244.73 * +427: [11.2 -1.6 0.8] 1300.61 +427: [13.6 -1.6 0.8] 4226.79 +427: [6.4 0.8 0.8] 3466.53 +427: [8.8 0.8 0.8] 715.907 * +427: [11.2 0.8 0.8] 742.224 +427: [13.6 0.8 0.8] 3663.89 +427: [6.4 3.2 0.8] 6031.02 +427: [8.8 3.2 0.8] 3418.24 +427: [11.2 3.2 0.8] 3594.38 +427: [13.6 3.2 0.8] 6613.31 +427: [6.4 5.6 0.8] 11844.3 +427: [8.8 5.6 0.8] 9554.72 +427: [11.2 5.6 0.8] 10071.8 +427: [13.6 5.6 0.8] 13302.2 +427: [6.4 -1.6 3.2] 6520.93 +427: [8.8 -1.6 3.2] 3949.58 +427: [11.2 -1.6 3.2] 4155.43 +427: [13.6 -1.6 3.2] 7178.92 +427: [6.4 0.8 3.2] 6031.02 +427: [8.8 0.8 3.2] 3418.24 +427: [11.2 0.8 3.2] 3594.38 +427: [13.6 0.8 3.2] 6613.31 +427: [6.4 3.2 3.2] 8673.76 +427: [8.8 3.2 3.2] 6203.3 +427: [11.2 3.2 3.2] 6533.85 +427: [13.6 3.2 3.2] 9652.77 +427: [6.4 5.6 3.2] 14655.7 +427: [8.8 5.6 3.2] 12518.1 +427: [11.2 5.6 3.2] 13199.5 +427: [13.6 5.6 3.2] 16535.7 +427: [6.4 -1.6 5.6] 12337.8 +427: [8.8 -1.6 5.6] 10089.9 +427: [11.2 -1.6 5.6] 10636.9 +427: [13.6 -1.6 5.6] 13872 +427: [6.4 0.8 5.6] 11844.3 +427: [8.8 0.8 5.6] 9554.72 +427: [11.2 0.8 5.6] 10071.8 +427: [13.6 0.8 5.6] 13302.2 +427: [6.4 3.2 5.6] 14655.7 +427: [8.8 3.2 5.6] 12518.1 +427: [11.2 3.2 5.6] 13199.5 +427: [13.6 3.2 5.6] 16535.7 +427: [6.4 5.6 5.6] 20999.9 +427: [8.8 5.6 5.6] 19216 +427: [11.2 5.6 5.6] 20269.6 +427: [13.6 5.6 5.6] 23835.8 +427: [2] xf_out->m_type = 1, xf_in->m_type = 1 +427: ** Registration worker thread finished. +427: Warping... +427: plm_warp_itk: xform_to_itk_vf +427: plm_warp_itk: convert_to_itk +427: plm_warp_itk: warping... +427: Saving image... +427: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha +427: Load: 0.019058 +427: Run: 0.515962 +427: Save: 0.014683 +427: Total: 0.549703 +427: Finished! +427: +427: STDERR: +427: Not an error +495: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +495: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha;--range;-900,-888 +495: EXPECTED_ERRNO is +148/578 Test #427: plm-reg-trans-a ....................... Passed 0.80 sec test 501 Start 501: plm-warp-a 501: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 501: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 501: Test timeout computed to be: 1500 -489: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -489: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha;--above;-888 -489: EXPECTED_ERRNO is -439: RETVAL: 0 -439: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -439: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -439: Launching registration worker thread -439: Inside registration worker thread -439: Doing registration stage -439: [1] xf_in->m_type = 0, xf_out->m_type = 0 -439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) -439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) -439: volume_calc_grad complete. -439: Computing grid search extent. -439: Dimension 0, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) -439: Dimension 1, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) -439: Dimension 2, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) -439: Native grid search extent: (-10.2493, 10.2493), (-10.2493, 10.2493), (-10.2493, 10.2493) -439: [0 0 0] 17568.3 * -439: Global grid search -439: [-10.2493 -10.2493 -10.2493] 102040 -439: [-6.14958 -10.2493 -10.2493] 87035.1 -439: [-2.04986 -10.2493 -10.2493] 73504.3 -439: [2.04986 -10.2493 -10.2493] 61973.2 -439: [6.14958 -10.2493 -10.2493] 57083.1 -439: [10.2493 -10.2493 -10.2493] 60324.8 -439: [-10.2493 -6.14958 -10.2493] 86358.6 -439: [-6.14958 -6.14958 -10.2493] 71329.7 -439: [-2.04986 -6.14958 -10.2493] 57402.6 -439: [2.04986 -6.14958 -10.2493] 45155 -439: [6.14958 -6.14958 -10.2493] 38807.6 -439: [10.2493 -6.14958 -10.2493] 39786.3 -439: [-10.2493 -2.04986 -10.2493] 79223.6 -439: [-6.14958 -2.04986 -10.2493] 64102 -439: [-2.04986 -2.04986 -10.2493] 49890.5 -439: [2.04986 -2.04986 -10.2493] 37200.4 -439: [6.14958 -2.04986 -10.2493] 30089.3 -439: [10.2493 -2.04986 -10.2493] 29962.9 -439: [-10.2493 2.04986 -10.2493] 79216.3 -439: [-6.14958 2.04986 -10.2493] 64097.4 -439: [-2.04986 2.04986 -10.2493] 49887.5 -439: [2.04986 2.04986 -10.2493] 37198.2 -439: [6.14958 2.04986 -10.2493] 30087.7 -439: [10.2493 2.04986 -10.2493] 29961.4 -439: [-10.2493 6.14958 -10.2493] 86370.3 -439: [-6.14958 6.14958 -10.2493] 71349.9 -439: [-2.04986 6.14958 -10.2493] 57424.9 -439: [2.04986 6.14958 -10.2493] 45174.8 -439: [6.14958 6.14958 -10.2493] 38826.9 -439: [10.2493 6.14958 -10.2493] 39808.1 -439: [-10.2493 10.2493 -10.2493] 101908 -439: [-6.14958 10.2493 -10.2493] 86978.3 -439: [-2.04986 10.2493 -10.2493] 73484.1 -439: [2.04986 10.2493 -10.2493] 61959.1 -439: [6.14958 10.2493 -10.2493] 57074.3 -439: [10.2493 10.2493 -10.2493] 60322.2 -439: [-10.2493 -10.2493 -6.14958] 86358.6 -439: [-6.14958 -10.2493 -6.14958] 71329.7 -439: [-2.04986 -10.2493 -6.14958] 57402.6 -439: [2.04986 -10.2493 -6.14958] 45155 -439: [6.14958 -10.2493 -6.14958] 38807.6 -439: [10.2493 -10.2493 -6.14958] 39786.3 -439: [-10.2493 -6.14958 -6.14958] 72037.7 -439: [-6.14958 -6.14958 -6.14958] 56910.4 -439: [-2.04986 -6.14958 -6.14958] 42538.4 -439: [2.04986 -6.14958 -6.14958] 29552 -439: [6.14958 -6.14958 -6.14958] 21798.9 -439: [10.2493 -6.14958 -6.14958] 20651.8 -439: [-10.2493 -2.04986 -6.14958] 65471 -439: [-6.14958 -2.04986 -6.14958] 50210.2 -439: [-2.04986 -2.04986 -6.14958] 35524.7 -439: [2.04986 -2.04986 -6.14958] 22079 -439: [6.14958 -2.04986 -6.14958] 13577.1 * -439: [10.2493 -2.04986 -6.14958] 11376 * -439: [-10.2493 2.04986 -6.14958] 65464.7 -439: [-6.14958 2.04986 -6.14958] 50206.4 -439: [-2.04986 2.04986 -6.14958] 35522.4 -439: [2.04986 2.04986 -6.14958] 22077.6 -439: [6.14958 2.04986 -6.14958] 13576.2 -439: [10.2493 2.04986 -6.14958] 11375.4 * -439: [-10.2493 6.14958 -6.14958] 72046.3 -439: [-6.14958 6.14958 -6.14958] 56926.2 -439: [-2.04986 6.14958 -6.14958] 42555.4 -439: [2.04986 6.14958 -6.14958] 29566.2 -439: [6.14958 6.14958 -6.14958] 21812 -439: [10.2493 6.14958 -6.14958] 20666.5 -439: [-10.2493 10.2493 -6.14958] 86238.7 -439: [-6.14958 10.2493 -6.14958] 71277.5 -439: [-2.04986 10.2493 -6.14958] 57383.1 -439: [2.04986 10.2493 -6.14958] 45141 -439: [6.14958 10.2493 -6.14958] 38798.2 -439: [10.2493 10.2493 -6.14958] 39782.4 -439: [-10.2493 -10.2493 -2.04986] 79223.6 -439: [-6.14958 -10.2493 -2.04986] 64102 -439: [-2.04986 -10.2493 -2.04986] 49890.5 -439: [2.04986 -10.2493 -2.04986] 37200.4 -439: [6.14958 -10.2493 -2.04986] 30089.3 -439: [10.2493 -10.2493 -2.04986] 29962.9 -439: [-10.2493 -6.14958 -2.04986] 65471 -439: [-6.14958 -6.14958 -2.04986] 50210.2 -439: [-2.04986 -6.14958 -2.04986] 35524.7 -439: [2.04986 -6.14958 -2.04986] 22079 -439: [6.14958 -6.14958 -2.04986] 13577.1 -439: [10.2493 -6.14958 -2.04986] 11376 -439: [-10.2493 -2.04986 -2.04986] 59138.3 -439: [-6.14958 -2.04986 -2.04986] 43721.4 -439: [-2.04986 -2.04986 -2.04986] 28705.1 -439: [2.04986 -2.04986 -2.04986] 14788.4 -439: [6.14958 -2.04986 -2.04986] 5539.07 * -439: [10.2493 -2.04986 -2.04986] 2301.37 * -439: [-10.2493 2.04986 -2.04986] 59132.6 -439: [-6.14958 2.04986 -2.04986] 43718 -439: [-2.04986 2.04986 -2.04986] 28703.3 -439: [2.04986 2.04986 -2.04986] 14787.4 -439: [6.14958 2.04986 -2.04986] 5538.67 -439: [10.2493 2.04986 -2.04986] 2301.27 * -439: [-10.2493 6.14958 -2.04986] 65478.6 -439: [-6.14958 6.14958 -2.04986] 50224.3 -439: [-2.04986 6.14958 -2.04986] 35539.7 -439: [2.04986 6.14958 -2.04986] 22091 -439: [6.14958 6.14958 -2.04986] 13587.7 -439: [10.2493 6.14958 -2.04986] 11387.8 -439: [-10.2493 10.2493 -2.04986] 79111.5 -439: [-6.14958 10.2493 -2.04986] 64054.3 -439: [-2.04986 10.2493 -2.04986] 49873.8 -439: [2.04986 10.2493 -2.04986] 37188.9 -439: [6.14958 10.2493 -2.04986] 30082.5 -439: [10.2493 10.2493 -2.04986] 29961.4 -439: [-10.2493 -10.2493 2.04986] 79216.3 -439: [-6.14958 -10.2493 2.04986] 64097.4 -439: [-2.04986 -10.2493 2.04986] 49887.5 -439: [2.04986 -10.2493 2.04986] 37198.2 -439: [6.14958 -10.2493 2.04986] 30087.7 -439: [10.2493 -10.2493 2.04986] 29961.4 -439: [-10.2493 -6.14958 2.04986] 65464.7 -439: [-6.14958 -6.14958 2.04986] 50206.4 -439: [-2.04986 -6.14958 2.04986] 35522.4 -439: [2.04986 -6.14958 2.04986] 22077.6 -439: [6.14958 -6.14958 2.04986] 13576.2 -439: [10.2493 -6.14958 2.04986] 11375.4 -439: [-10.2493 -2.04986 2.04986] 59132.6 -439: [-6.14958 -2.04986 2.04986] 43718 -439: [-2.04986 -2.04986 2.04986] 28703.3 -439: [2.04986 -2.04986 2.04986] 14787.4 -439: [6.14958 -2.04986 2.04986] 5538.67 -439: [10.2493 -2.04986 2.04986] 2301.27 * -439: [-10.2493 2.04986 2.04986] 59126.8 -439: [-6.14958 2.04986 2.04986] 43714.7 -439: [-2.04986 2.04986 2.04986] 28701.5 -439: [2.04986 2.04986 2.04986] 14786.4 -439: [6.14958 2.04986 2.04986] 5538.27 -439: [10.2493 2.04986 2.04986] 2301.18 * -439: [-10.2493 6.14958 2.04986] 65472.3 -439: [-6.14958 6.14958 2.04986] 50220.5 -439: [-2.04986 6.14958 2.04986] 35537.5 -439: [2.04986 6.14958 2.04986] 22089.6 -439: [6.14958 6.14958 2.04986] 13586.9 -439: [10.2493 6.14958 2.04986] 11387.2 -439: [-10.2493 10.2493 2.04986] 79104.4 -439: [-6.14958 10.2493 2.04986] 64049.8 -439: [-2.04986 10.2493 2.04986] 49870.9 -439: [2.04986 10.2493 2.04986] 37186.9 -439: [6.14958 10.2493 2.04986] 30080.9 -439: [10.2493 10.2493 2.04986] 29960.1 -439: [-10.2493 -10.2493 6.14958] 86370.3 -439: [-6.14958 -10.2493 6.14958] 71349.9 -439: [-2.04986 -10.2493 6.14958] 57424.9 -439: [2.04986 -10.2493 6.14958] 45174.8 -439: [6.14958 -10.2493 6.14958] 38826.9 -439: [10.2493 -10.2493 6.14958] 39808.1 -439: [-10.2493 -6.14958 6.14958] 72046.3 -439: [-6.14958 -6.14958 6.14958] 56926.2 -439: [-2.04986 -6.14958 6.14958] 42555.4 -439: [2.04986 -6.14958 6.14958] 29566.2 -439: [6.14958 -6.14958 6.14958] 21812 -439: [10.2493 -6.14958 6.14958] 20666.5 -439: [-10.2493 -2.04986 6.14958] 65478.6 -439: [-6.14958 -2.04986 6.14958] 50224.3 -439: [-2.04986 -2.04986 6.14958] 35539.7 -439: [2.04986 -2.04986 6.14958] 22091 -439: [6.14958 -2.04986 6.14958] 13587.7 -439: [10.2493 -2.04986 6.14958] 11387.8 -439: [-10.2493 2.04986 6.14958] 65472.4 -439: [-6.14958 2.04986 6.14958] 50220.5 -439: [-2.04986 2.04986 6.14958] 35537.5 -439: [2.04986 2.04986 6.14958] 22089.6 -439: [6.14958 2.04986 6.14958] 13586.9 -439: [10.2493 2.04986 6.14958] 11387.2 -439: [-10.2493 6.14958 6.14958] 72055.1 -439: [-6.14958 6.14958 6.14958] 56942.1 -439: [-2.04986 6.14958 6.14958] 42572.7 -439: [2.04986 6.14958 6.14958] 29580.5 -439: [6.14958 6.14958 6.14958] 21825.4 -439: [10.2493 6.14958 6.14958] 20681.4 -439: [-10.2493 10.2493 6.14958] 86251.4 -439: [-6.14958 10.2493 6.14958] 71298.8 -439: [-2.04986 10.2493 6.14958] 57406.5 -439: [2.04986 10.2493 6.14958] 45161.9 -439: [6.14958 10.2493 6.14958] 38818.7 -439: [10.2493 10.2493 6.14958] 39805.5 -439: [-10.2493 -10.2493 10.2493] 101908 -439: [-6.14958 -10.2493 10.2493] 86978.3 -439: [-2.04986 -10.2493 10.2493] 73484.1 -439: [2.04986 -10.2493 10.2493] 61959.1 -439: [6.14958 -10.2493 10.2493] 57074.3 -439: [10.2493 -10.2493 10.2493] 60322.2 -439: [-10.2493 -6.14958 10.2493] 86238.7 -439: [-6.14958 -6.14958 10.2493] 71277.5 -439: [-2.04986 -6.14958 10.2493] 57383.1 -439: [2.04986 -6.14958 10.2493] 45141 -439: [6.14958 -6.14958 10.2493] 38798.2 -439: [10.2493 -6.14958 10.2493] 39782.4 -439: [-10.2493 -2.04986 10.2493] 79111.5 -439: [-6.14958 -2.04986 10.2493] 64054.3 -439: [-2.04986 -2.04986 10.2493] 49873.8 -439: [2.04986 -2.04986 10.2493] 37188.9 -439: [6.14958 -2.04986 10.2493] 30082.5 -439: [10.2493 -2.04986 10.2493] 29961.4 -439: [-10.2493 2.04986 10.2493] 79104.4 -439: [-6.14958 2.04986 10.2493] 64049.8 -439: [-2.04986 2.04986 10.2493] 49870.9 -439: [2.04986 2.04986 10.2493] 37186.9 -439: [6.14958 2.04986 10.2493] 30081 -439: [10.2493 2.04986 10.2493] 29960.1 -439: [-10.2493 6.14958 10.2493] 86251.4 -439: [-6.14958 6.14958 10.2493] 71298.8 -439: [-2.04986 6.14958 10.2493] 57406.5 -439: [2.04986 6.14958 10.2493] 45161.9 -439: [6.14958 6.14958 10.2493] 38818.7 -439: [10.2493 6.14958 10.2493] 39805.5 -439: [-10.2493 10.2493 10.2493] 101782 -439: [-6.14958 10.2493 10.2493] 86927.9 -439: [-2.04986 10.2493 10.2493] 73469.9 -439: [2.04986 10.2493 10.2493] 61951.1 -439: [6.14958 10.2493 10.2493] 57072 -439: [10.2493 10.2493 10.2493] 60327 -439: [2] xf_out->m_type = 1, xf_in->m_type = 0 -439: ** Registration worker thread finished. -439: Warping... -439: plm_warp_itk: xform_to_itk_vf -439: plm_warp_itk: convert_to_itk -439: plm_warp_itk: warping... -439: Saving image... -439: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha -439: Load: 0.092005 -439: Run: 0.160188 -439: Save: 0.005301 -439: Total: 0.257494 -439: Finished! -439: -439: STDERR: -439: Not an error -459: RETVAL: 0 -459: STDOUT: Time = 0.000918 seconds -459: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha -459: -459: STDERR: -459: Not an error -462: RETVAL: 0 -462: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha -462: -462: STDERR: -462: Not an error -145/578 Test #439: plm-reg-autores-b ..................... Passed 0.66 sec -146/578 Test #459: plm-resample-b ........................ Passed 0.51 sec -147/578 Test #462: plm-resample-c ........................ Passed 0.42 sec +486: RETVAL: 0 +486: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha +486: +486: STDERR: +486: Not an error +149/578 Test #486: plm-union ............................. Passed 0.16 sec test 504 Start 504: plm-warp-b 504: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 504: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 504: Test timeout computed to be: 1500 +501: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +501: PARMS is warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha +501: EXPECTED_ERRNO is +504: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +504: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha;--default-value;0 +504: EXPECTED_ERRNO is +489: RETVAL: 0 +489: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha +489: +489: STDERR: +489: Not an error +150/578 Test #489: plm-threshold-a ....................... Passed 0.17 sec test 509 Start 509: plm-warp-c 509: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha;--interpolation;nn;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 509: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 509: Test timeout computed to be: 1500 +483: RETVAL: 0 +483: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha +483: +483: STDERR: +483: Not an error +151/578 Test #483: plm-intersect ......................... Passed 0.23 sec test 512 Start 512: plm-warp-d 512: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha;--interpolation;nn;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 512: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 512: Test timeout computed to be: 1500 -495: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -495: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha;--range;-900,-888 -495: EXPECTED_ERRNO is -501: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -501: PARMS is warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha -501: EXPECTED_ERRNO is -483: RETVAL: 0 -483: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha -483: -483: STDERR: -483: Not an error -148/578 Test #483: plm-intersect ......................... Passed 0.22 sec +465: RETVAL: 0 +465: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd +465: +465: STDERR: +465: Not an error +512: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +512: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha;--interpolation;nn;--default-value;0 +512: EXPECTED_ERRNO is +152/578 Test #465: plm-scale-a ........................... Passed 0.39 sec test 515 Start 515: plm-warp-f 515: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd;--default-value;0;--harden-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 515: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 515: Test timeout computed to be: 1500 -492: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -492: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha;--below;-900 -492: EXPECTED_ERRNO is -452: RETVAL: 0 -452: STDOUT: bspline_xform_initialize -452: rdims = (2,2,2) -452: vox_per_rgn = (22,22,22) -452: cdims = (5 5 5) -452: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha -452: Finished! -452: -452: STDERR: -452: Not an error -149/578 Test #452: plm-compose-c ......................... Passed 0.56 sec -test 518 - Start 518: plm-warp-g - -518: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -518: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -518: Test timeout computed to be: 1500 509: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 509: PARMS is warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha;--interpolation;nn;--default-value;0 509: EXPECTED_ERRNO is -504: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -504: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha;--default-value;0 -504: EXPECTED_ERRNO is -512: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -512: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha;--interpolation;nn;--default-value;0 -512: EXPECTED_ERRNO is 515: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 515: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd;--default-value;0;--harden-linear-xf 515: EXPECTED_ERRNO is -518: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -518: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf -518: EXPECTED_ERRNO is -486: RETVAL: 0 -486: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha -486: -486: STDERR: -486: Not an error -150/578 Test #486: plm-union ............................. Passed 0.34 sec -test 521 - Start 521: plm-warp-h - -521: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -521: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -521: Test timeout computed to be: 1500 -521: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -521: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf -521: EXPECTED_ERRNO is -489: RETVAL: 0 -489: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha -489: -489: STDERR: -489: Not an error -151/578 Test #489: plm-threshold-a ....................... Passed 0.39 sec -test 524 - Start 524: plm-warp-i - -524: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -524: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -524: Test timeout computed to be: 1500 -504: RETVAL: 0 -504: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) -504: bspline_xform_initialize -504: rdims = (3,3,3) -504: vox_per_rgn = (15,15,15) -504: cdims = (6 6 6) -504: Setting PIH from XFORM -504: PIH is: -504: Origin = -25.0000 -25.0000 -25.0000 -504: Size = 38 38 38 -504: Spacing = 1.3158 1.3158 1.3158 -504: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -504: Rt_study_warp: Warping m_img -504: Running: plm_warp_native -504: Converting input image... -504: Converting xform... -504: bspline_xform_initialize -504: rdims = (3,3,3) -504: vox_per_rgn = (15,15,15) -504: cdims = (6 6 6) -504: Creating output vf... -504: Creating output volume... -504: Running native warper... -504: bspline_warp complete. -504: Back convert to original type... -504: > Convert vf to itk -504: > Conversion complete. -504: plm_warp_native is complete. -504: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha) -504: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha -504: Rt_study_warp: Saving vf. -504: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha -504: Rt_study_warp: warp and save ss. -504: Finished! -504: -504: STDERR: -504: Not an error -152/578 Test #504: plm-warp-b ............................ Passed 0.35 sec -test 527 - Start 527: plm-xf-convert-a - -527: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -527: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -527: Test timeout computed to be: 1500 -515: RETVAL: 0 -515: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm) -515: Setting PIH from M_IMG -515: PIH is: -515: Origin = -243.4211 -243.4211 -243.4211 -515: Size = 38 38 38 -515: Spacing = 13.1579 13.1579 13.1579 -515: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -515: Rt_study_warp: Warping m_img -515: plm_warp_itk: xform_to_itk_vf -515: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd) -515: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd -515: Rt_study_warp: warp and save ss. -515: Finished! -515: -515: STDERR: -515: Not an error -495: RETVAL: 0 -495: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha -495: -495: STDERR: -495: Not an error -512: RETVAL: 0 -512: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) -512: bspline_xform_initialize -512: rdims = (3,3,3) -512: vox_per_rgn = (15,15,15) -512: cdims = (6 6 6) -512: Setting PIH from XFORM -512: PIH is: -512: Origin = -25.0000 -25.0000 -25.0000 -512: Size = 38 38 38 -512: Spacing = 1.3158 1.3158 1.3158 -512: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -512: Rt_study_warp: Warping m_img -512: Running: plm_warp_native -512: Converting input image... -512: Converting xform... -512: bspline_xform_initialize -512: rdims = (3,3,3) -512: vox_per_rgn = (15,15,15) -512: cdims = (6 6 6) -512: Creating output vf... -512: Creating output volume... -512: Running native warper... -512: bspline_warp complete. -512: Back convert to original type... -512: > Convert vf to itk -512: > Conversion complete. -512: plm_warp_native is complete. -512: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha) -512: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha -512: Rt_study_warp: Saving vf. -512: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha -512: Rt_study_warp: warp and save ss. -512: Finished! -512: -512: STDERR: -512: Not an error -524: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -524: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf -524: EXPECTED_ERRNO is -153/578 Test #495: plm-threshold-c ....................... Passed 0.39 sec -154/578 Test #512: plm-warp-d ............................ Passed 0.36 sec -155/578 Test #515: plm-warp-f ............................ Passed 0.34 sec -test 531 - Start 531: plm-xf-convert-d-warp-1 - -531: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -531: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -531: Test timeout computed to be: 1500 -test 534 - Start 534: plm-xf-convert-d-warp-2 - -534: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -534: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -534: Test timeout computed to be: 1500 -test 540 - Start 540: plm-xf-convert-h - -540: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -540: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -540: Test timeout computed to be: 1500 -527: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -527: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125; -527: EXPECTED_ERRNO is 492: RETVAL: 0 492: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha 492: 492: STDERR: 492: Not an error -156/578 Test #492: plm-threshold-b ....................... Passed 0.43 sec -test 543 - Start 543: plm-xf-convert-i - -543: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -543: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -543: Test timeout computed to be: 1500 -531: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -531: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd -531: EXPECTED_ERRNO is -540: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -540: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf -540: EXPECTED_ERRNO is -534: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -534: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd -534: EXPECTED_ERRNO is -543: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -543: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf -543: EXPECTED_ERRNO is -518: RETVAL: 0 -518: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm) -518: Setting PIH from M_IMG -518: PIH is: -518: Origin = -243.4211 -243.4211 -243.4211 -518: Size = 38 38 38 -518: Spacing = 13.1579 13.1579 13.1579 -518: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -518: Rt_study_warp: Warping m_img -518: plm_warp_itk: xform_to_itk_vf -518: plm_warp_itk: convert_to_itk -518: plm_warp_itk: warping... -518: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd) -518: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd -518: Rt_study_warp: warp and save ss. -518: Finished! -518: -518: STDERR: -518: Not an error -157/578 Test #518: plm-warp-g ............................ Passed 0.41 sec -test 546 - Start 546: xf-invert-vf-zero-1 - -546: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-zero-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -546: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -546: Test timeout computed to be: 1500 -509: RETVAL: 0 -509: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) -509: bspline_xform_initialize -509: rdims = (3,3,3) -509: vox_per_rgn = (15,15,15) -509: cdims = (6 6 6) -509: Setting PIH from XFORM -509: PIH is: -509: Origin = -25.0000 -25.0000 -25.0000 -509: Size = 38 38 38 -509: Spacing = 1.3158 1.3158 1.3158 -509: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -509: Rt_study_warp: Warping m_img -509: plm_warp_itk: xform_to_itk_vf -509: plm_warp_itk: convert_to_itk -509: plm_warp_itk: warping... -509: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha) -509: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha -509: Rt_study_warp: Saving vf. -509: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha -509: Rt_study_warp: warp and save ss. -509: Finished! -509: -509: STDERR: -509: Not an error -158/578 Test #509: plm-warp-c ............................ Passed 0.45 sec -test 549 - Start 549: xf-invert-vf-trans-1 - -549: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-trans-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -549: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -549: Test timeout computed to be: 1500 -546: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -546: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha -546: EXPECTED_ERRNO is -549: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -549: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10 -549: EXPECTED_ERRNO is -501: RETVAL: 0 -501: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) -501: bspline_xform_initialize -501: rdims = (3,3,3) -501: vox_per_rgn = (15,15,15) -501: cdims = (6 6 6) -501: Setting PIH from XFORM -501: PIH is: -501: Origin = -25.0000 -25.0000 -25.0000 -501: Size = 38 38 38 -501: Spacing = 1.3158 1.3158 1.3158 -501: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -501: Rt_study_warp: Warping m_img -501: plm_warp_itk: xform_to_itk_vf -501: plm_warp_itk: convert_to_itk -501: plm_warp_itk: warping... -501: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha) -501: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha -501: Rt_study_warp: Saving vf. -501: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha -501: Rt_study_warp: warp and save ss. -501: Finished! -501: -501: STDERR: -501: Not an error -159/578 Test #501: plm-warp-a ............................ Passed 0.56 sec -test 556 - Start 556: proton-dose-1 - -556: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -556: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -556: Test timeout computed to be: 1500 -556: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -556: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt -556: EXPECTED_ERRNO is -524: RETVAL: 0 -524: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt) -524: Setting PIH from M_IMG -524: PIH is: -524: Origin = -25.0000 -25.0000 -25.0000 -524: Size = 38 38 38 -524: Spacing = 1.3158 1.3158 1.3158 -524: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -524: Rt_study_warp: Warping m_img -524: plm_warp_itk: xform_to_itk_vf -524: plm_warp_itk: convert_to_itk -524: plm_warp_itk: warping... -524: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd) -524: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd -524: Rt_study_warp: warp and save ss. -524: Finished! -524: -524: STDERR: -524: Not an error -160/578 Test #524: plm-warp-i ............................ Passed 0.29 sec -test 559 - Start 559: proton-dose-4a - -559: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -559: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -559: Test timeout computed to be: 1500 -527: RETVAL: 0 -527: STDOUT: bspline_xform_initialize -527: rdims = (1,1,1) -527: vox_per_rgn = (4,4,4) -527: cdims = (4 4 4) -527: about to xform_convert -527: Converting to (itk) vector field -527: did xform_convert -527: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha -527: -527: STDERR: -527: Not an error -161/578 Test #527: plm-xf-convert-a ...................... Passed 0.30 sec -test 562 - Start 562: proton-dose-4d - -562: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -562: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -562: Test timeout computed to be: 1500 -540: RETVAL: 0 -540: STDOUT: about to xform_convert -540: Converting to (itk) vector field -540: did xform_convert -540: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd -540: -540: STDERR: -540: Not an error -162/578 Test #540: plm-xf-convert-h ...................... Passed 0.30 sec -test 565 - Start 565: proton-dose-5a - -565: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -565: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -565: Test timeout computed to be: 1500 -559: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -559: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt -559: EXPECTED_ERRNO is -543: RETVAL: 0 -543: STDOUT: bspline_xform_initialize -543: rdims = (1,1,1) -543: vox_per_rgn = (4,4,4) -543: cdims = (4 4 4) -543: about to xform_convert -543: Converting to (itk) vector field -543: did xform_convert -543: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd -543: -543: STDERR: -543: Not an error -163/578 Test #543: plm-xf-convert-i ...................... Passed 0.31 sec -test 568 - Start 568: proton-dose-5d - -568: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -568: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -568: Test timeout computed to be: 1500 -565: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -565: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt -565: EXPECTED_ERRNO is -562: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -562: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt -562: EXPECTED_ERRNO is -568: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -568: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt -568: EXPECTED_ERRNO is -521: RETVAL: 0 -521: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt) -521: Setting PIH from M_IMG -521: PIH is: -521: Origin = -25.0000 -25.0000 -25.0000 -521: Size = 38 38 38 -521: Spacing = 1.3158 1.3158 1.3158 -521: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -521: Rt_study_warp: Warping m_img -521: plm_warp_itk: xform_to_itk_vf -521: plm_warp_itk: convert_to_itk -521: plm_warp_itk: warping... -521: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd) -521: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd -521: Rt_study_warp: warp and save ss. -521: Finished! -521: -521: STDERR: -521: Not an error -164/578 Test #521: plm-warp-h ............................ Passed 0.53 sec -test 571 - Start 571: proton-dose-6a - -571: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-6a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -571: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -571: Test timeout computed to be: 1500 -549: RETVAL: 0 -549: STDOUT: Paste and smooth loop -549: Iteration 0/10 -549: Convolving -549: Iteration 1/10 -549: Convolving -549: Iteration 2/10 -549: Convolving -549: Iteration 3/10 -549: Convolving -549: Iteration 4/10 -549: Convolving -549: Iteration 5/10 -549: Convolving -549: Iteration 6/10 -549: Convolving -549: Iteration 7/10 -549: Convolving -549: Iteration 8/10 -549: Convolving -549: Iteration 9/10 -549: Convolving -549: Done. -549: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha -549: -549: STDERR: -549: Not an error -165/578 Test #549: xf-invert-vf-trans-1 .................. Passed 0.32 sec -test 39 - Start 39: rect-10 - -39: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -39: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -39: Test timeout computed to be: 1500 -534: RETVAL: 0 -534: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm) -534: BSplineDeformableTransform (0x560bed32c000) -534: RTTI typeinfo: itk::BSplineDeformableTransform -534: Reference Count: 3 -534: Modified Time: 1477 -534: Debug: Off -534: Object Name: -534: Observers: -534: none -534: CoefficientImage: [ 0x560bed32b700, 0x560bed322ce0, 0x560bed322fa0 ] -534: ValidRegion: ImageRegion (0x560bed32c148) -534: Dimension: 3 -534: Index: [1, 1, 1] -534: Size: [3, 3, 3] -534: -534: BulkTransform: 0x560bed323b50 -534: WeightsFunction: 0x560bed339690 -534: BulkTransformType: IdentityTransform -534: GridOrigin: [-53.2895, -53.2895, -53.2895] -534: GridSpacing: [28.9474, 28.9474, 28.9474] -534: GridDirection: 1 0 0 -534: 0 1 0 -534: 0 0 1 -534: -534: GridRegion: ImageRegion (0x560bed32b908) -534: Dimension: 3 -534: Index: [0, 0, 0] -534: Size: [5, 5, 5] -534: -534: Setting PIH from M_IMG -534: PIH is: -534: Origin = -25.0000 -25.0000 -25.0000 -534: Size = 38 38 38 -534: Spacing = 1.3158 1.3158 1.3158 -534: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -534: Rt_study_warp: Warping m_img -534: plm_warp_itk: xform_to_itk_vf -534: plm_warp_itk: convert_to_itk -534: plm_warp_itk: warping... -534: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd) -534: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd -534: Rt_study_warp: warp and save ss. -534: Finished! -534: -534: STDERR: -534: Not an error -166/578 Test #534: plm-xf-convert-d-warp-2 ............... Passed 0.42 sec -test 42 - Start 42: rect-11 - -42: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-11" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -42: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -42: Test timeout computed to be: 1500 -571: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -571: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt -571: EXPECTED_ERRNO is -39: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -39: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50 -39: EXPECTED_ERRNO is -531: RETVAL: 0 -531: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt) -531: bspline_xform_initialize -531: rdims = (2,2,2) -531: vox_per_rgn = (11,11,11) -531: cdims = (5 5 5) -531: Setting PIH from XFORM -531: PIH is: -531: Origin = -24.3421 -24.3421 -24.3421 -531: Size = 19 19 19 -531: Spacing = 2.6316 2.6316 2.6316 -531: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -531: Rt_study_warp: Warping m_img -531: Running: plm_warp_native -531: Converting input image... -531: Converting xform... -531: bspline_xform_initialize -531: rdims = (2,2,2) -531: vox_per_rgn = (11,11,11) -531: cdims = (5 5 5) -531: Creating output vf... -531: Creating output volume... -531: Running native warper... -531: bspline_warp complete. -531: Back convert to original type... -531: > Convert vf to itk -531: > Conversion complete. -531: plm_warp_native is complete. -531: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd) -531: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd -531: Rt_study_warp: warp and save ss. -531: Finished! -531: -531: STDERR: -531: Not an error -167/578 Test #531: plm-xf-convert-d-warp-1 ............... Passed 0.45 sec -test 51 - Start 51: rect-19 - -51: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-19" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -51: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -51: Test timeout computed to be: 1500 -42: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -42: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60 -42: EXPECTED_ERRNO is -546: RETVAL: 0 -546: STDOUT: Paste and smooth loop -546: Iteration 0/20 -546: Convolving -546: Iteration 1/20 -546: Convolving -546: Iteration 2/20 -546: Convolving -546: Iteration 3/20 -546: Convolving -546: Iteration 4/20 -546: Convolving -546: Iteration 5/20 -546: Convolving -546: Iteration 6/20 -546: Convolving -546: Iteration 7/20 -546: Convolving -546: Iteration 8/20 -546: Convolving -546: Iteration 9/20 -546: Convolving -546: Iteration 10/20 -546: Convolving -546: Iteration 11/20 -546: Convolving -546: Iteration 12/20 -546: Convolving -546: Iteration 13/20 -546: Convolving -546: Iteration 14/20 -546: Convolving -546: Iteration 15/20 -546: Convolving -546: Iteration 16/20 -546: Convolving -546: Iteration 17/20 -546: Convolving -546: Iteration 18/20 -546: Convolving -546: Iteration 19/20 -546: Convolving -546: Done. -546: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha -546: -546: STDERR: -546: Not an error -51: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -51: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150 -51: EXPECTED_ERRNO is -168/578 Test #546: xf-invert-vf-zero-1 ................... Passed 0.42 sec -test 53 - Start 53: rectarr-01 - -53: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -53: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -53: Test timeout computed to be: 1500 -53: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -53: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5 -53: EXPECTED_ERRNO is -412: RETVAL: 0 -412: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha -412: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha -412: Launching registration worker thread -412: Inside registration worker thread -412: Doing registration stage -412: [1] xf_in->m_type = 0, xf_out->m_type = 0 -412: RESAMPLE 1 1: (4 4 4), (4 4 4) -412: RESAMPLE 1 1: (4 4 4), (4 4 4) -412: volume_calc_grad complete. -412: bspline_xform_initialize -412: Warning: vox_per_rgn was less than 4. -412: Warning: vox_per_rgn was less than 4. -412: Warning: vox_per_rgn was less than 4. -412: rdims = (3,3,3) -412: vox_per_rgn = (4,4,4) -412: cdims = (6 6 6) -412: Algorithm flavor = g -412: Threading = 0 -412: >> Checking JH allocation -412: BSPLINE PARMS -412: max_its = 20 -412: max_feval = 20 -412: BSPLINE XFORM HEADER -412: vox_per_rgn = 4 4 4 -412: roi_offset = 0 0 0 -412: roi_dim = 9 9 9 -412: img_dc = 1 0 0 0 1 0 0 0 1 -412: BST METRICS -412: MET 110100 MSE 1.000000 -412: Setting nmax, mmax = 648 27 -412: >>> START -412: This problem is unconstrained. -412: [ 0, 0] MSE 1310.066 NV 729 GM 32.312 GN 10.8 [ 0.059 s ] -412: CMIN 0.00 CAVG 0.00 CMAX 0.00 -412: LSD 0.00 -412: [ 0, 1] MSE 1295.068 NV 729 GM 32.107 GN 10.8 [ 0.020 s ] -412: CMIN -0.80 CAVG -0.00 CMAX 0.03 -412: LSD 1.00 -412: [ 0, 2] MSE 1236.886 NV 729 GM 31.289 GN 10.5 [ 0.040 s ] -412: CMIN -3.98 CAVG -0.02 CMAX 0.14 -412: LSD 5.00 -412: [ 0, 3] MSE 1033.121 NV 729 GM 28.011 GN 9.4 [ 0.020 s ] -412: CMIN -16.73 CAVG -0.10 CMAX 0.57 -412: LSD 21.00 -412: [ 1, 4] MSE 1227.425 NV 729 GM -31.287 GN 10.6 [ 0.036 s ] -412: CMIN -130.39 CAVG -0.75 CMAX 15.78 -412: LSD 145.43 -412: [ 1, 5] MSE 666.262 NV 729 GM 16.009 GN 5.49 [ 0.044 s ] -412: CMIN -63.32 CAVG -0.36 CMAX 6.81 -412: LSD 59.61 -412: [ 2, 6] MSE 1232.974 NV 729 GM -31.573 GN 10.6 [ 0.032 s ] -412: CMIN -133.31 CAVG -0.76 CMAX 26.37 -412: LSD 96.76 -412: [ 2, 7] MSE 663.364 NV 729 GM -16.837 GN 5.81 [ 0.020 s ] -412: CMIN -74.19 CAVG -0.42 CMAX 9.85 -412: LSD 15.03 -412: [ 3, 8] MSE 654.961 NV 729 GM -10.617 GN 3.9 [ 0.040 s ] -412: CMIN -69.17 CAVG -0.40 CMAX 9.75 -412: LSD 6.20 -412: [ 4, 9] MSE 648.056 NV 729 GM 16.849 GN 5.74 [ 0.020 s ] -412: CMIN -59.17 CAVG -0.35 CMAX 12.07 -412: LSD 13.05 -412: [ 4, 10] MSE 648.518 NV 729 GM 6.481 GN 2.37 [ 0.053 s ] -412: CMIN -64.64 CAVG -0.37 CMAX 10.80 -412: LSD 5.91 -412: [ 5, 11] MSE 642.586 NV 729 GM -2.800 GN 1.61 [ 0.023 s ] -412: CMIN -65.72 CAVG -0.38 CMAX 12.16 -412: LSD 3.39 -412: [ 6, 12] MSE 621.446 NV 729 GM -3.050 GN 1.62 [ 0.030 s ] -412: CMIN -65.92 CAVG -0.39 CMAX 17.36 -412: LSD 11.87 -412: [ 6, 13] MSE 550.866 NV 729 GM -6.628 GN 2.45 [ 0.033 s ] -412: CMIN -66.69 CAVG -0.41 CMAX 38.13 -412: LSD 59.33 -412: [ 7, 14] MSE 512.605 NV 729 GM -3.857 GN 1.62 [ 0.044 s ] -412: CMIN -62.22 CAVG -0.42 CMAX 47.82 -412: LSD 24.85 -412: [ 7, 15] MSE 447.450 NV 729 GM 1.527 GN 1.38 [ 0.038 s ] -412: CMIN -86.57 CAVG -0.48 CMAX 86.57 -412: LSD 124.23 -412: [ 7, 16] MSE 464.351 NV 729 GM 2.120 GN 1.3 [ 0.018 s ] -412: CMIN -65.28 CAVG -0.45 CMAX 65.28 -412: LSD 69.63 -412: [ 8, 17] MSE 472.701 NV 729 GM -6.632 GN 2.42 [ 0.024 s ] -412: CMIN -65.88 CAVG -0.45 CMAX 65.88 -412: LSD 10.76 -412: [ 8, 18] MSE 465.428 NV 729 GM 2.619 GN 1.34 [ 0.024 s ] -412: CMIN -65.36 CAVG -0.45 CMAX 65.36 -412: LSD 1.50 -412: [ 8, 19] MSE 464.475 NV 729 GM 2.117 GN 1.3 [ 0.024 s ] -412: CMIN -65.29 CAVG -0.45 CMAX 65.29 -412: LSD 0.17 -412: [ 8, 20] MSE 464.365 NV 729 GM 2.120 GN 1.3 [ 0.016 s ] -412: CMIN -65.28 CAVG -0.45 CMAX 65.28 -412: LSD 0.02 -412: [2] xf_out->m_type = 9, xf_in->m_type = 0 -412: Doing registration stage -412: [1] xf_in->m_type = 9, xf_out->m_type = 0 -412: RESAMPLE 1 1: (1 1 1), (1 1 1) -412: RESAMPLE 1 1: (1 1 1), (1 1 1) -412: volume_calc_grad complete. -412: bspline_xform_initialize -412: Warning: vox_per_rgn was less than 4. -412: Warning: vox_per_rgn was less than 4. -412: Warning: vox_per_rgn was less than 4. -412: rdims = (10,10,10) -412: vox_per_rgn = (4,4,4) -412: cdims = (13 13 13) -412: Algorithm flavor = g -412: Threading = 0 -412: >> Checking JH allocation -412: BSPLINE PARMS -412: max_its = 20 -412: max_feval = 20 -412: BSPLINE XFORM HEADER -412: vox_per_rgn = 4 4 4 -412: roi_offset = 0 0 0 -412: roi_dim = 38 38 38 -412: img_dc = 1 0 0 0 1 0 0 0 1 -412: BST METRICS -412: MET 110100 MSE 1.000000 -412: Setting nmax, mmax = 6591 83 -412: >>> START -412: This problem is unconstrained. -412: [ 0, 0] MSE 2187.416 NV 54548 GM -54.885 GN 20.1 [ 0.028 s ] -412: CMIN -34.32 CAVG -2.98 CMAX 34.99 -412: LSD 0.00 -412: [ 0, 1] MSE 2164.676 NV 54548 GM -53.547 GN 19.7 [ 0.036 s ] -412: CMIN -34.32 CAVG -2.98 CMAX 34.99 -412: LSD 1.00 -412: [ 0, 2] MSE 2077.643 NV 54548 GM -48.153 GN 18.1 [ 0.036 s ] -412: CMIN -34.32 CAVG -2.98 CMAX 34.99 -412: LSD 5.00 -412: [ 1, 3] MSE 1531.465 NV 54548 GM -5.028 GN 6.72 [ 0.035 s ] -412: CMIN -34.32 CAVG -2.97 CMAX 34.99 -412: LSD 49.50 -412: [ 2, 4] MSE 1454.329 NV 54548 GM 33.264 GN 9.36 [ 0.017 s ] -412: CMIN -34.74 CAVG -2.96 CMAX 34.99 -412: LSD 27.82 -412: [ 3, 5] MSE 1285.873 NV 54548 GM 41.621 GN 9.3 [ 0.047 s ] -412: CMIN -38.62 CAVG -2.96 CMAX 34.99 -412: LSD 33.32 -412: [ 4, 6] MSE 601.694 NV 54548 GM -58.120 GN 12.7 [ 0.040 s ] -412: CMIN -66.67 CAVG -3.01 CMAX 47.45 -412: LSD 225.15 -412: [ 5, 7] MSE 543.836 NV 54548 GM 31.901 GN 9.57 [ 0.020 s ] -412: CMIN -66.22 CAVG -2.99 CMAX 59.99 -412: LSD 53.14 -412: [ 6, 8] MSE 418.242 NV 54548 GM 12.804 GN 3.31 [ 0.030 s ] -412: CMIN -65.97 CAVG -3.00 CMAX 53.84 -412: LSD 23.35 -412: [ 7, 9] MSE 404.446 NV 54548 GM -9.046 GN 2.82 [ 0.023 s ] -412: CMIN -67.92 CAVG -3.00 CMAX 54.77 -412: LSD 12.26 -412: [ 8, 10] MSE 385.397 NV 54548 GM -5.940 GN 2.61 [ 0.023 s ] -412: CMIN -68.58 CAVG -3.00 CMAX 55.54 -412: LSD 8.37 -412: [ 9, 11] MSE 330.971 NV 54548 GM -28.234 GN 4.05 [ 0.023 s ] -412: CMIN -72.02 CAVG -3.01 CMAX 62.09 -412: LSD 44.90 -412: [10, 12] MSE 292.026 NV 54548 GM -5.908 GN 2.66 [ 0.023 s ] -412: CMIN -74.57 CAVG -3.00 CMAX 67.66 -412: LSD 33.62 -412: [11, 13] MSE 251.369 NV 54548 GM 4.024 GN 2.37 [ 0.031 s ] -412: CMIN -84.98 CAVG -2.99 CMAX 73.83 -412: LSD 50.34 -412: [12, 14] MSE 228.758 NV 54548 GM 11.643 GN 4.01 [ 0.031 s ] -412: CMIN -98.90 CAVG -2.97 CMAX 76.10 -412: LSD 60.96 -412: [13, 15] MSE 306.308 NV 54548 GM 49.796 GN 7.96 [ 0.020 s ] -412: CMIN -130.24 CAVG -2.94 CMAX 83.22 -412: LSD 135.53 -412: [13, 16] MSE 226.800 NV 54548 GM 20.941 GN 4.12 [ 0.051 s ] -412: CMIN -103.93 CAVG -2.96 CMAX 76.84 -412: LSD 21.75 -412: [14, 17] MSE 205.578 NV 54548 GM 24.444 GN 3.6 [ 0.028 s ] -412: CMIN -117.55 CAVG -2.96 CMAX 78.37 -412: LSD 53.89 -412: [15, 18] MSE 158.105 NV 54548 GM 6.383 GN 1.69 [ 0.023 s ] -412: CMIN -116.51 CAVG -2.96 CMAX 72.95 -412: LSD 24.10 -412: [16, 19] MSE 139.232 NV 54548 GM -1.923 GN 1.28 [ 0.024 s ] -412: CMIN -119.83 CAVG -2.96 CMAX 72.22 -412: LSD 15.80 -412: [17, 20] MSE 119.453 NV 54548 GM -6.009 GN 1.45 [ 0.034 s ] -412: CMIN -128.50 CAVG -2.96 CMAX 71.16 -412: LSD 33.91 -412: [2] xf_out->m_type = 9, xf_in->m_type = 9 -412: ** Registration worker thread finished. -412: Warping... -412: Running: plm_warp_native -412: Converting input image... -412: Converting xform... -412: bspline_xform_initialize -412: rdims = (10,10,10) -412: vox_per_rgn = (4,4,4) -412: cdims = (13 13 13) -412: Creating output volume... -412: Running native warper... -412: bspline_warp complete. -412: Back convert to original type... -412: plm_warp_native is complete. -412: Saving image... -412: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd -412: Load: 0.0921922 -412: Run: 1.33645 -412: Save: 0.0307169 -412: Total: 1.45936 -412: Finished! -412: -412: STDERR: -412: Not an error -169/578 Test #412: plm-reg-multi-b ....................... Passed 2.12 sec -test 54 - Start 54: rectarr-02 +153/578 Test #492: plm-threshold-b ....................... Passed 0.17 sec +test 518 + Start 518: plm-warp-g -54: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -54: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -54: Test timeout computed to be: 1500 +518: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +518: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +518: Test timeout computed to be: 1500 +518: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +518: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf +518: EXPECTED_ERRNO is 430: RETVAL: 0 430: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 430: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -13407,21 +12971,324 @@ 430: plm_warp_itk: warping... 430: Saving image... 430: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha -430: Load: 0.0396471 -430: Run: 1.41592 -430: Save: 0.00356197 -430: Total: 1.45913 +430: Load: 0.0508521 +430: Run: 0.492652 +430: Save: 0.013031 +430: Total: 0.556535 430: Finished! 430: 430: STDERR: 430: Not an error -170/578 Test #430: plm-reg-trans-b ....................... Passed 1.74 sec -test 55 - Start 55: rectarr-m-01 +154/578 Test #430: plm-reg-trans-b ....................... Passed 0.96 sec +test 521 + Start 521: plm-warp-h -55: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -55: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -55: Test timeout computed to be: 1500 +521: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +521: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +521: Test timeout computed to be: 1500 +521: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +521: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf +521: EXPECTED_ERRNO is +501: RETVAL: 0 +501: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) +501: bspline_xform_initialize +501: rdims = (3,3,3) +501: vox_per_rgn = (15,15,15) +501: cdims = (6 6 6) +501: Setting PIH from XFORM +501: PIH is: +501: Origin = -25.0000 -25.0000 -25.0000 +501: Size = 38 38 38 +501: Spacing = 1.3158 1.3158 1.3158 +501: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +501: Rt_study_warp: Warping m_img +501: plm_warp_itk: xform_to_itk_vf +501: plm_warp_itk: convert_to_itk +501: plm_warp_itk: warping... +501: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha) +501: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha +501: Rt_study_warp: Saving vf. +501: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha +501: Rt_study_warp: warp and save ss. +501: Finished! +501: +501: STDERR: +501: Not an error +155/578 Test #501: plm-warp-a ............................ Passed 0.23 sec +test 524 + Start 524: plm-warp-i + +524: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +524: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +524: Test timeout computed to be: 1500 +509: RETVAL: 0 +509: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) +509: bspline_xform_initialize +509: rdims = (3,3,3) +509: vox_per_rgn = (15,15,15) +509: cdims = (6 6 6) +509: Setting PIH from XFORM +509: PIH is: +509: Origin = -25.0000 -25.0000 -25.0000 +509: Size = 38 38 38 +509: Spacing = 1.3158 1.3158 1.3158 +509: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +509: Rt_study_warp: Warping m_img +509: plm_warp_itk: xform_to_itk_vf +509: plm_warp_itk: convert_to_itk +509: plm_warp_itk: warping... +509: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha) +509: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha +509: Rt_study_warp: Saving vf. +509: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha +509: Rt_study_warp: warp and save ss. +509: Finished! +509: +509: STDERR: +509: Not an error +156/578 Test #509: plm-warp-c ............................ Passed 0.21 sec +524: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +524: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf +524: EXPECTED_ERRNO is +504: RETVAL: 0 +504: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) +504: bspline_xform_initialize +504: rdims = (3,3,3) +504: vox_per_rgn = (15,15,15) +504: cdims = (6 6 6) +504: Setting PIH from XFORM +504: PIH is: +504: Origin = -25.0000 -25.0000 -25.0000 +504: Size = 38 38 38 +504: Spacing = 1.3158 1.3158 1.3158 +504: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +504: Rt_study_warp: Warping m_img +504: Running: plm_warp_native +504: Converting input image... +504: Converting xform... +504: bspline_xform_initialize +504: rdims = (3,3,3) +504: vox_per_rgn = (15,15,15) +504: cdims = (6 6 6) +504: Creating output vf... +504: Creating output volume... +504: Running native warper... +504: bspline_warp complete. +504: Back convert to original type... +504: > Convert vf to itk +504: > Conversion complete. +504: plm_warp_native is complete. +504: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha) +504: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha +504: Rt_study_warp: Saving vf. +504: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha +504: Rt_study_warp: warp and save ss. +504: Finished! +504: +504: STDERR: +test 527 + Start 527: plm-xf-convert-a + +527: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +527: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +527: Test timeout computed to be: 1500 +527: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +527: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125; +527: EXPECTED_ERRNO is +504: Not an error +157/578 Test #504: plm-warp-b ............................ Passed 0.37 sec +test 531 + Start 531: plm-xf-convert-d-warp-1 + +531: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +531: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +531: Test timeout computed to be: 1500 +527: RETVAL: 0 +527: STDOUT: bspline_xform_initialize +527: rdims = (1,1,1) +527: vox_per_rgn = (4,4,4) +527: cdims = (4 4 4) +527: about to xform_convert +527: Converting to (itk) vector field +527: did xform_convert +527: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha +527: +527: STDERR: +527: Not an error +158/578 Test #527: plm-xf-convert-a ...................... Passed 0.12 sec +512: RETVAL: 0 +512: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-2.txt) +512: bspline_xform_initialize +512: rdims = (3,3,3) +512: vox_per_rgn = (15,15,15) +512: cdims = (6 6 6) +512: Setting PIH from XFORM +512: PIH is: +512: Origin = -25.0000 -25.0000 -25.0000 +512: Size = 38 38 38 +512: Spacing = 1.3158 1.3158 1.3158 +512: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +512: Rt_study_warp: Warping m_img +512: Running: plm_warp_native +512: Converting input image... +512: Converting xform... +512: bspline_xform_initialize +512: rdims = (3,3,3) +512: vox_per_rgn = (15,15,15) +512: cdims = (6 6 6) +512: Creating output vf... +512: Creating output volume... +512: Running native warper... +512: bspline_warp complete. +512: Back convert to original type... +512: > Convert vf to itk +512: > Conversion complete. +512: plm_warp_native is complete. +512: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha) +512: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha +512: Rt_study_warp: Saving vf. +512: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha +512: Rt_study_warp: warp and save ss. +512: Finished! +512: +512: STDERR: +512: Not an error +test 534 + Start 534: plm-xf-convert-d-warp-2 + +534: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +534: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +534: Test timeout computed to be: 1500 +518: RETVAL: 0 +518: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm) +518: Setting PIH from M_IMG +518: PIH is: +518: Origin = -243.4211 -243.4211 -243.4211 +518: Size = 38 38 38 +518: Spacing = 13.1579 13.1579 13.1579 +518: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +518: Rt_study_warp: Warping m_img +518: plm_warp_itk: xform_to_itk_vf +518: plm_warp_itk: convert_to_itk +518: plm_warp_itk: warping... +518: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd) +518: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd +518: Rt_study_warp: warp and save ss. +518: Finished! +518: +518: STDERR: +518: Not an error +524: RETVAL: 0 +524: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt) +524: Setting PIH from M_IMG +524: PIH is: +524: Origin = -25.0000 -25.0000 -25.0000 +524: Size = 38 38 38 +524: Spacing = 1.3158 1.3158 1.3158 +524: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +524: Rt_study_warp: Warping m_img +524: plm_warp_itk: xform_to_itk_vf +524: plm_warp_itk: convert_to_itk +524: plm_warp_itk: warping... +524: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd) +524: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd +524: Rt_study_warp: warp and save ss. +524: Finished! +524: +524: STDERR: +524: Not an error +495: RETVAL: 0 +495: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha +495: +495: STDERR: +495: Not an error +515: RETVAL: 0 +515: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-affine-a.tfm) +515: Setting PIH from M_IMG +515: PIH is: +515: Origin = -243.4211 -243.4211 -243.4211 +515: Size = 38 38 38 +515: Spacing = 13.1579 13.1579 13.1579 +515: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +515: Rt_study_warp: Warping m_img +515: plm_warp_itk: xform_to_itk_vf +515: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd) +515: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd +515: Rt_study_warp: warp and save ss. +515: Finished! +515: +515: STDERR: +515: Not an error +159/578 Test #512: plm-warp-d ............................ Passed 0.40 sec +160/578 Test #518: plm-warp-g ............................ Passed 0.32 sec +161/578 Test #524: plm-warp-i ............................ Passed 0.21 sec +162/578 Test #495: plm-threshold-c ....................... Passed 0.47 sec +163/578 Test #515: plm-warp-f ............................ Passed 0.38 sec +531: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +531: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd +531: EXPECTED_ERRNO is +test 540 + Start 540: plm-xf-convert-h + +540: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +540: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +540: Test timeout computed to be: 1500 +test 543 + Start 543: plm-xf-convert-i + +543: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +543: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +543: Test timeout computed to be: 1500 +test 546 + Start 546: xf-invert-vf-zero-1 + +546: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-zero-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +546: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +546: Test timeout computed to be: 1500 +test 549 + Start 549: xf-invert-vf-trans-1 + +549: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-trans-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +549: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +549: Test timeout computed to be: 1500 +test 556 + Start 556: proton-dose-1 + +556: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +556: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +556: Test timeout computed to be: 1500 +534: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +534: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd +534: EXPECTED_ERRNO is +521: RETVAL: 0 +521: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-translation-1.txt) +521: Setting PIH from M_IMG +521: PIH is: +521: Origin = -25.0000 -25.0000 -25.0000 +521: Size = 38 38 38 +521: Spacing = 1.3158 1.3158 1.3158 +521: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +521: Rt_study_warp: Warping m_img +521: plm_warp_itk: xform_to_itk_vf +521: plm_warp_itk: convert_to_itk +521: plm_warp_itk: warping... +521: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd) +521: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd +521: Rt_study_warp: warp and save ss. +521: Finished! +521: +521: STDERR: +521: Not an error +164/578 Test #521: plm-warp-h ............................ Passed 0.30 sec +540: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +540: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf +540: EXPECTED_ERRNO is +test 559 + Start 559: proton-dose-4a + +559: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +559: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +559: Test timeout computed to be: 1500 111: RETVAL: 0 111: STDOUT: Reconstructing... 111: Processing image 0 @@ -13444,635 +13311,21 @@ 111: Processing image 17 111: Processing image 18 111: Processing image 19 -111: I/O time (total) = 0.0229506 -111: I/O time (per image) = 0.00114753 +111: I/O time (total) = 0.00148678 +111: I/O time (per image) = 7.43389e-05 111: Filter time = 0 111: Filter time (per image) = 0 -111: Backprojection time = 4.14651 -111: Backprojection time (per image) = 0.207326 +111: Backprojection time = 3.29202 +111: Backprojection time (per image) = 0.164601 111: Writing output volume(s)... 111: done. 111: 111: 111: STDERR: 111: Not an error -171/578 Test #111: fdk-cpu-d ............................. Passed 4.60 sec -test 56 - Start 56: rectarr-m-02 - -56: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -56: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -56: Test timeout computed to be: 1500 -54: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -54: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5 -54: EXPECTED_ERRNO is -55: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -55: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13 -55: EXPECTED_ERRNO is -39: RETVAL: 0 -39: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha -39: -39: STDERR: -39: Not an error -56: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -56: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13 -56: EXPECTED_ERRNO is -172/578 Test #39: rect-10 ............................... Passed 0.25 sec -test 61 - Start 61: roi-1 - -61: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=roi-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -61: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -61: Test timeout computed to be: 1500 -61: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -61: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300 -61: EXPECTED_ERRNO is -51: RETVAL: 0 -51: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha -51: -51: STDERR: -51: Not an error -173/578 Test #51: rect-19 ............................... Passed 0.26 sec -test 65 - Start 65: sphere-4 - -65: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -65: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -65: Test timeout computed to be: 1500 -42: RETVAL: 0 -42: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha -42: -42: STDERR: -42: Not an error -174/578 Test #42: rect-11 ............................... Passed 0.30 sec -test 77 - Start 77: vf-zero-stats - -77: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-zero-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -77: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -77: Test timeout computed to be: 1500 -65: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -65: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150 -65: EXPECTED_ERRNO is -54: RETVAL: 0 -54: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha -54: -54: STDERR: -54: Not an error -175/578 Test #54: rectarr-02 ............................ Passed 0.16 sec -test 79 - Start 79: vf-trans-1-stats - -79: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -79: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -79: Test timeout computed to be: 1500 -77: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -77: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha -77: EXPECTED_ERRNO is -79: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -79: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha -79: EXPECTED_ERRNO is -55: RETVAL: 0 -55: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha -55: -55: STDERR: -55: Not an error -176/578 Test #55: rectarr-m-01 .......................... Passed 0.20 sec -test 81 - Start 81: vf-trans-2-stats - -81: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -81: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -81: Test timeout computed to be: 1500 -81: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -81: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha -81: EXPECTED_ERRNO is -53: RETVAL: 0 -53: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha -53: -53: STDERR: -53: Not an error -177/578 Test #53: rectarr-01 ............................ Passed 0.36 sec -test 83 - Start 83: vf-radial-1-stats - -83: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -83: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -83: Test timeout computed to be: 1500 -427: RETVAL: 0 -427: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -427: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -427: Launching registration worker thread -427: Inside registration worker thread -427: Doing registration stage -427: [1] xf_in->m_type = 0, xf_out->m_type = 0 -427: RESAMPLE 1 1: (1 1 1), (1 1 1) -427: RESAMPLE 1 1: (1 1 1), (1 1 1) -427: volume_calc_grad complete. -427: Computing grid search extent. -427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) -427: [0 0 0] 18945.9 * -427: Global grid search -427: [-10 -10 -10] 109949 -427: [-6 -10 -10] 96800 -427: [-2 -10 -10] 79011.9 -427: [2 -10 -10] 66244.1 -427: [6 -10 -10] 61932.6 -427: [10 -10 -10] 63642.7 -427: [-10 -6 -10] 95633.9 -427: [-6 -6 -10] 81703.4 -427: [-2 -6 -10] 63642.4 -427: [2 -6 -10] 49838.6 -427: [6 -6 -10] 43366.8 -427: [10 -6 -10] 43154 -427: [-10 -2 -10] 84842.6 -427: [-6 -2 -10] 71049.9 -427: [-2 -2 -10] 53542.3 -427: [2 -2 -10] 39751 -427: [6 -2 -10] 32450.7 -427: [10 -2 -10] 31286.8 -427: [-10 2 -10] 84829.9 -427: [-6 2 -10] 71041.2 -427: [-2 2 -10] 53536.6 -427: [2 2 -10] 39746.7 -427: [6 2 -10] 32446.9 -427: [10 2 -10] 31283.5 -427: [-10 6 -10] 95561.4 -427: [-6 6 -10] 81658.4 -427: [-2 6 -10] 63613.3 -427: [2 6 -10] 49813.8 -427: [6 6 -10] 43342.5 -427: [10 6 -10] 43131.5 -427: [-10 10 -10] 109668 -427: [-6 10 -10] 96633.8 -427: [-2 10 -10] 78907 -427: [2 10 -10] 66152.1 -427: [6 10 -10] 61839.3 -427: [10 10 -10] 63556.7 -427: [-10 -10 -6] 95633.9 -427: [-6 -10 -6] 81703.4 -427: [-2 -10 -6] 63642.4 -427: [2 -10 -6] 49838.6 -427: [6 -10 -6] 43366.8 -427: [10 -10 -6] 43154 -427: [-10 -6 -6] 82028.8 -427: [-6 -6 -6] 67247.9 -427: [-2 -6 -6] 48818.3 -427: [2 -6 -6] 33916.9 -427: [6 -6 -6] 25278 -427: [10 -6 -6] 23165.8 -427: [-10 -2 -6] 72112.1 -427: [-6 -2 -6] 57467.9 -427: [-2 -2 -6] 39558.4 -427: [2 -2 -6] 24681.2 -427: [6 -2 -6] 15293.3 * -427: [10 -2 -6] 12314.7 * -427: [-10 2 -6] 72100.9 -427: [-6 2 -6] 57460.6 -427: [-2 2 -6] 39554 -427: [2 2 -6] 24678.2 -427: [6 2 -6] 15291.1 -427: [10 2 -6] 12313 * -427: [-10 6 -6] 81963.5 -427: [-6 6 -6] 67208.4 -427: [-2 6 -6] 48793.6 -427: [2 6 -6] 33896.7 -427: [6 6 -6] 25258.7 -427: [10 6 -6] 23148.6 -427: [-10 10 -6] 95379.4 -427: [-6 10 -6] 81554.8 -427: [-2 10 -6] 63550.9 -427: [2 10 -6] 49759.6 -427: [6 10 -6] 43287.7 -427: [10 10 -6] 43082.4 -427: [-10 -10 -2] 84842.6 -427: [-6 -10 -2] 71049.9 -427: [-2 -10 -2] 53542.3 -427: [2 -10 -2] 39751 -427: [6 -10 -2] 32450.7 -427: [10 -10 -2] 31286.8 -427: [-10 -6 -2] 72112.1 -427: [-6 -6 -2] 57467.9 -427: [-2 -6 -2] 39558.4 -427: [2 -6 -2] 24681.2 -427: [6 -6 -2] 15293.3 -427: [10 -6 -2] 12314.7 -427: [-10 -2 -2] 63010.9 -427: [-6 -2 -2] 48498.1 -427: [-2 -2 -2] 31072.4 -427: [2 -2 -2] 16224.1 -427: [6 -2 -2] 6155.79 * -427: [10 -2 -2] 2386.22 * -427: [-10 2 -2] 63000.9 -427: [-6 2 -2] 48491.8 -427: [-2 2 -2] 31068.8 -427: [2 2 -2] 16221.9 -427: [6 2 -2] 6154.44 -427: [10 2 -2] 2385.44 * -427: [-10 6 -2] 72052.8 -427: [-6 6 -2] 57432.4 -427: [-2 6 -2] 39536.8 -427: [2 6 -2] 24663.8 -427: [6 6 -2] 15277.1 -427: [10 6 -2] 12300.5 -427: [-10 10 -2] 84610.1 -427: [-6 10 -2] 70915.1 -427: [-2 10 -2] 53460.4 -427: [2 10 -2] 39681 -427: [6 10 -2] 32381 -427: [10 10 -2] 31224.4 -427: [-10 -10 2] 84829.9 -427: [-6 -10 2] 71041.2 -427: [-2 -10 2] 53536.6 -427: [2 -10 2] 39746.7 -427: [6 -10 2] 32446.9 -427: [10 -10 2] 31283.5 -427: [-10 -6 2] 72100.9 -427: [-6 -6 2] 57460.6 -427: [-2 -6 2] 39554 -427: [2 -6 2] 24678.2 -427: [6 -6 2] 15291.1 -427: [10 -6 2] 12313 -427: [-10 -2 2] 63000.9 -427: [-6 -2 2] 48491.8 -427: [-2 -2 2] 31068.8 -427: [2 -2 2] 16221.9 -427: [6 -2 2] 6154.44 -427: [10 -2 2] 2385.44 -427: [-10 2 2] 62990.9 -427: [-6 2 2] 48485.5 -427: [-2 2 2] 31065.2 -427: [2 2 2] 16219.7 -427: [6 2 2] 6153.1 -427: [10 2 2] 2384.66 * -427: [-10 6 2] 72041.7 -427: [-6 6 2] 57425.2 -427: [-2 6 2] 39532.4 -427: [2 6 2] 24660.8 -427: [6 6 2] 15274.9 -427: [10 6 2] 12298.9 -427: [-10 10 2] 84597.7 -427: [-6 10 2] 70906.7 -427: [-2 10 2] 53454.9 -427: [2 10 2] 39676.9 -427: [6 10 2] 32377.5 -427: [10 10 2] 31221.4 -427: [-10 -10 6] 95561.4 -427: [-6 -10 6] 81658.4 -427: [-2 -10 6] 63613.3 -427: [2 -10 6] 49813.8 -427: [6 -10 6] 43342.5 -427: [10 -10 6] 43131.5 -427: [-10 -6 6] 81963.5 -427: [-6 -6 6] 67208.4 -427: [-2 -6 6] 48793.6 -427: [2 -6 6] 33896.7 -427: [6 -6 6] 25258.7 -427: [10 -6 6] 23148.6 -427: [-10 -2 6] 72052.8 -427: [-6 -2 6] 57432.4 -427: [-2 -2 6] 39536.8 -427: [2 -2 6] 24663.8 -427: [6 -2 6] 15277.1 -427: [10 -2 6] 12300.5 -427: [-10 2 6] 72041.7 -427: [-6 2 6] 57425.2 -427: [-2 2 6] 39532.4 -427: [2 2 6] 24660.8 -427: [6 2 6] 15274.9 -427: [10 2 6] 12298.9 -427: [-10 6 6] 81898.9 -427: [-6 6 6] 67169.4 -427: [-2 6 6] 48769.5 -427: [2 6 6] 33876.9 -427: [6 6 6] 25240 -427: [10 6 6] 23132 -427: [-10 10 6] 95309.5 -427: [-6 10 6] 81512.3 -427: [-2 10 6] 63524.1 -427: [2 10 6] 49737.2 -427: [6 10 6] 43266 -427: [10 10 6] 43062.8 -427: [-10 -10 10] 109668 -427: [-6 -10 10] 96633.8 -427: [-2 -10 10] 78907 -427: [2 -10 10] 66152.1 -427: [6 -10 10] 61839.3 -427: [10 -10 10] 63556.7 -427: [-10 -6 10] 95379.4 -427: [-6 -6 10] 81554.8 -427: [-2 -6 10] 63550.9 -427: [2 -6 10] 49759.6 -427: [6 -6 10] 43287.7 -427: [10 -6 10] 43082.4 -427: [-10 -2 10] 84610.1 -427: [-6 -2 10] 70915.1 -427: [-2 -2 10] 53460.4 -427: [2 -2 10] 39681 -427: [6 -2 10] 32381 -427: [10 -2 10] 31224.4 -427: [-10 2 10] 84597.7 -427: [-6 2 10] 70906.7 -427: [-2 2 10] 53454.9 -427: [2 2 10] 39676.9 -427: [6 2 10] 32377.5 -427: [10 2 10] 31221.4 -427: [-10 6 10] 95309.5 -427: [-6 6 10] 81512.3 -427: [-2 6 10] 63524.1 -427: [2 6 10] 49737.2 -427: [6 6 10] 43266 -427: [10 6 10] 43062.8 -427: [-10 10 10] 109399 -427: [-6 10 10] 96478.4 -427: [-2 10 10] 78812.5 -427: [2 10 10] 66070.4 -427: [6 10 10] 61757.4 -427: [10 10 10] 63483 -427: [2] xf_out->m_type = 1, xf_in->m_type = 0 -427: [1] xf_in->m_type = 1, xf_out->m_type = 0 -427: RESAMPLE 1 1: (1 1 1), (1 1 1) -427: RESAMPLE 1 1: (1 1 1), (1 1 1) -427: volume_calc_grad complete. -427: Computing grid search extent. -427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) -427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) -427: [10 2 2] 2384.66 * -427: Local grid search -427: [6.4 -1.6 -1.6] 4439.65 -427: [8.8 -1.6 -1.6] 1771.35 * -427: [11.2 -1.6 -1.6] 1856.67 -427: [13.6 -1.6 -1.6] 4787.36 -427: [6.4 0.8 -1.6] 3954.1 -427: [8.8 0.8 -1.6] 1244.73 * -427: [11.2 0.8 -1.6] 1300.61 -427: [13.6 0.8 -1.6] 4226.79 -427: [6.4 3.2 -1.6] 6520.93 -427: [8.8 3.2 -1.6] 3949.58 -427: [11.2 3.2 -1.6] 4155.43 -427: [13.6 3.2 -1.6] 7178.92 -427: [6.4 5.6 -1.6] 12337.8 -427: [8.8 5.6 -1.6] 10089.9 -427: [11.2 5.6 -1.6] 10636.9 -427: [13.6 5.6 -1.6] 13872 -427: [6.4 -1.6 0.8] 3954.1 -427: [8.8 -1.6 0.8] 1244.73 * -427: [11.2 -1.6 0.8] 1300.61 -427: [13.6 -1.6 0.8] 4226.79 -427: [6.4 0.8 0.8] 3466.53 -427: [8.8 0.8 0.8] 715.907 * -427: [11.2 0.8 0.8] 742.224 -427: [13.6 0.8 0.8] 3663.89 -427: [6.4 3.2 0.8] 6031.02 -427: [8.8 3.2 0.8] 3418.24 -427: [11.2 3.2 0.8] 3594.38 -427: [13.6 3.2 0.8] 6613.31 -427: [6.4 5.6 0.8] 11844.3 -427: [8.8 5.6 0.8] 9554.72 -427: [11.2 5.6 0.8] 10071.8 -427: [13.6 5.6 0.8] 13302.2 -427: [6.4 -1.6 3.2] 6520.93 -427: [8.8 -1.6 3.2] 3949.58 -427: [11.2 -1.6 3.2] 4155.43 -427: [13.6 -1.6 3.2] 7178.92 -427: [6.4 0.8 3.2] 6031.02 -427: [8.8 0.8 3.2] 3418.24 -427: [11.2 0.8 3.2] 3594.38 -427: [13.6 0.8 3.2] 6613.31 -427: [6.4 3.2 3.2] 8673.76 -427: [8.8 3.2 3.2] 6203.3 -427: [11.2 3.2 3.2] 6533.85 -427: [13.6 3.2 3.2] 9652.77 -427: [6.4 5.6 3.2] 14655.7 -427: [8.8 5.6 3.2] 12518.1 -427: [11.2 5.6 3.2] 13199.5 -427: [13.6 5.6 3.2] 16535.7 -427: [6.4 -1.6 5.6] 12337.8 -427: [8.8 -1.6 5.6] 10089.9 -427: [11.2 -1.6 5.6] 10636.9 -427: [13.6 -1.6 5.6] 13872 -427: [6.4 0.8 5.6] 11844.3 -427: [8.8 0.8 5.6] 9554.72 -427: [11.2 0.8 5.6] 10071.8 -427: [13.6 0.8 5.6] 13302.2 -427: [6.4 3.2 5.6] 14655.7 -427: [8.8 3.2 5.6] 12518.1 -427: [11.2 3.2 5.6] 13199.5 -427: [13.6 3.2 5.6] 16535.7 -427: [6.4 5.6 5.6] 20999.9 -427: [8.8 5.6 5.6] 19216 -427: [11.2 5.6 5.6] 20269.6 -427: [13.6 5.6 5.6] 23835.8 -427: [2] xf_out->m_type = 1, xf_in->m_type = 1 -427: ** Registration worker thread finished. -427: Warping... -427: plm_warp_itk: xform_to_itk_vf -427: plm_warp_itk: convert_to_itk -427: plm_warp_itk: warping... -427: Saving image... -427: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha -427: Load: 0.0919349 -427: Run: 1.48416 -427: Save: 0.00317502 -427: Total: 1.57927 -427: Finished! -427: -427: STDERR: -427: Not an error -178/578 Test #427: plm-reg-trans-a ....................... Passed 2.04 sec -test 85 - Start 85: plm-compare-a - -85: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -85: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -85: Test timeout computed to be: 1500 -56: RETVAL: 0 -56: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha -56: -56: STDERR: -56: Not an error -179/578 Test #56: rectarr-m-02 .......................... Passed 0.28 sec -test 87 - Start 87: plm-compare-b - -87: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -87: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -87: Test timeout computed to be: 1500 -83: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -83: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha -83: EXPECTED_ERRNO is -85: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -85: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -85: EXPECTED_ERRNO is -87: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -87: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha -87: EXPECTED_ERRNO is -61: RETVAL: 0 -61: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha -61: -61: STDERR: -61: Not an error -180/578 Test #61: roi-1 ................................. Passed 0.31 sec -test 89 - Start 89: plm-compare-c - -89: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -89: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -89: Test timeout computed to be: 1500 -65: RETVAL: 0 -65: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha -65: -65: STDERR: -65: Not an error -181/578 Test #65: sphere-4 .............................. Passed 0.26 sec -test 92 - Start 92: plm-diff-a-stats - -92: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -92: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -92: Test timeout computed to be: 1500 -92: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -92: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha -92: EXPECTED_ERRNO is -89: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -89: PARMS is compare;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha -89: EXPECTED_ERRNO is -79: RETVAL: 0 -79: STDOUT: Min: 10.000 0.000 0.000 -79: Mean: 10.000 0.000 0.000 -79: Max: 10.000 0.000 0.000 -79: Mean abs: 10.000 0.000 0.000 -79: Ave len: 10.000 -79: Jacobian: MINJAC 1 MAXJAC 1 -79: Energy: MINDIL 0 MAXDIL 0 -79: MAXSTRAIN 0 TOTSTRAIN 0 -79: Second derivatives: MINSECDER 0 MAXSECDER 0 -79: AVESECDER 0 INTSECDER 0 -79: Max second derivative at: (1 1 1) -79: -79: STDERR: -79: Not an error -182/578 Test #79: vf-trans-1-stats ...................... Passed 0.29 sec -test 95 - Start 95: plm-diff-b-stats - -95: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -95: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -95: Test timeout computed to be: 1500 -95: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -95: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha -95: EXPECTED_ERRNO is -81: RETVAL: 0 -81: STDOUT: Min: 0.000 10.000 0.000 -81: Mean: 0.000 10.000 0.000 -81: Max: 0.000 10.000 0.000 -81: Mean abs: 0.000 10.000 0.000 -81: Ave len: 10.000 -81: Jacobian: MINJAC 1 MAXJAC 1 -81: Energy: MINDIL 0 MAXDIL 0 -81: MAXSTRAIN 0 TOTSTRAIN 0 -81: Second derivatives: MINSECDER 0 MAXSECDER 0 -81: AVESECDER 0 INTSECDER 0 -81: Max second derivative at: (1 1 1) -81: -81: STDERR: -81: Not an error -183/578 Test #81: vf-trans-2-stats ...................... Passed 0.27 sec -test 97 - Start 97: demons-a - -97: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=demons-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/demons" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=-m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -97: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -97: Test timeout computed to be: 1500 -97: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/demons -97: PARMS is -m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -97: EXPECTED_ERRNO is -87: RETVAL: 0 -87: STDOUT: Min: 10.000 -10.000 0.000 -87: Mean: 10.000 -10.000 0.000 -87: Max: 10.000 -10.000 0.000 -87: Mean abs: 10.000 10.000 0.000 -87: Ave len: 14.142 -87: -87: STDERR: -87: Not an error -184/578 Test #87: plm-compare-b ......................... Passed 0.26 sec -test 100 - Start 100: drr-a-stats - -100: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -100: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -100: Test timeout computed to be: 1500 -100: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -100: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm -100: EXPECTED_ERRNO is -77: RETVAL: 0 -77: STDOUT: Min: 0.000 0.000 0.000 -77: Mean: 0.000 0.000 0.000 -77: Max: 0.000 0.000 0.000 -77: Mean abs: 0.000 0.000 0.000 -77: Ave len: 0.000 -77: Jacobian: MINJAC 1 MAXJAC 1 -77: Energy: MINDIL 0 MAXDIL 0 -77: MAXSTRAIN 0 TOTSTRAIN 0 -77: Second derivatives: MINSECDER 0 MAXSECDER 0 -77: AVESECDER 0 INTSECDER 0 -77: Max second derivative at: (1 1 1) -77: -77: STDERR: -77: Not an error -185/578 Test #77: vf-zero-stats ......................... Passed 0.46 sec -test 103 - Start 103: drr-b-stats - -103: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-b/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -103: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -103: Test timeout computed to be: 1500 -92: RETVAL: 0 -92: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872 -92: -92: STDERR: -92: Not an error -103: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -103: PARMS is stats;drr-b/out_0010.pfm -103: EXPECTED_ERRNO is -186/578 Test #92: plm-diff-a-stats ...................... Passed 0.25 sec -test 106 - Start 106: drr-c-stats - -106: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-c/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -106: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -106: Test timeout computed to be: 1500 -106: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -106: PARMS is stats;drr-c/out_0010.pfm -106: EXPECTED_ERRNO is -95: RETVAL: 0 -95: STDOUT: Min: 10.000 -10.000 0.000 -95: Mean: 10.000 -10.000 0.000 -95: Max: 10.000 -10.000 0.000 -95: Mean abs: 10.000 10.000 0.000 -95: Ave len: 14.142 -95: Jacobian: MINJAC 1 MAXJAC 1 -95: Energy: MINDIL 0 MAXDIL 0 -95: MAXSTRAIN 0 TOTSTRAIN 0 -95: Second derivatives: MINSECDER 0 MAXSECDER 0 -95: AVESECDER 0 INTSECDER 0 -95: Max second derivative at: (1 1 1) -95: -95: STDERR: -95: Not an error -187/578 Test #95: plm-diff-b-stats ...................... Passed 0.28 sec -test 109 - Start 109: fdk-cpu-a-stats - -109: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -109: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -109: Test timeout computed to be: 1500 +543: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +543: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf +543: EXPECTED_ERRNO is 375: RETVAL: 0 375: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 375: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha @@ -14107,28 +13360,28 @@ 375: Setting nmax, mmax = 6591 83 375: >>> START 375: This problem is unconstrained. -375: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.781 s ] -375: MSE 5540.166 RM 0.000 [ 0.076 | 0.705 ] +375: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.481 s ] +375: MSE 5540.166 RM 0.000 [ 0.060 | 0.421 ] 375: CMIN 0.00 CAVG 0.00 CMAX 0.00 375: LSD 0.00 -375: [ 0, 1] SCORE 5484.185 NV 54872 GM 0.045 GN 27.7 [ 0.554 s ] -375: MSE 5484.124 RM 0.061 [ 0.040 | 0.514 ] +375: [ 0, 1] SCORE 5484.185 NV 54872 GM 0.045 GN 27.7 [ 0.292 s ] +375: MSE 5484.124 RM 0.061 [ 0.024 | 0.268 ] 375: CMIN -0.16 CAVG -0.00 CMAX 0.22 375: LSD 1.00 -375: [ 0, 2] SCORE 5267.761 NV 54872 GM 0.224 GN 25.8 [ 0.479 s ] -375: MSE 5266.236 RM 1.525 [ 0.036 | 0.442 ] +375: [ 0, 2] SCORE 5267.761 NV 54872 GM 0.224 GN 25.8 [ 0.226 s ] +375: MSE 5266.236 RM 1.525 [ 0.024 | 0.203 ] 375: CMIN -0.81 CAVG 0.00 CMAX 1.12 375: LSD 5.00 -375: [ 0, 3] SCORE 4511.430 NV 54872 GM 0.928 GN 18.4 [ 0.506 s ] -375: MSE 4484.536 RM 26.894 [ 0.040 | 0.465 ] +375: [ 0, 3] SCORE 4511.430 NV 54872 GM 0.928 GN 18.4 [ 0.187 s ] +375: MSE 4484.536 RM 26.894 [ 0.034 | 0.153 ] 375: CMIN -3.39 CAVG 0.00 CMAX 4.70 375: LSD 21.00 -375: [ 1, 4] SCORE 3229.400 NV 54872 GM 1.898 GN 2.39 [ 0.291 s ] -375: MSE 3018.981 RM 210.419 [ 0.024 | 0.267 ] +375: [ 1, 4] SCORE 3229.400 NV 54872 GM 1.898 GN 2.39 [ 0.155 s ] +375: MSE 3018.981 RM 210.419 [ 0.018 | 0.137 ] 375: CMIN -9.73 CAVG -0.00 CMAX 13.18 375: LSD 40.25 -375: [ 2, 5] SCORE 3185.099 NV 54872 GM 4.098 GN 2.08 [ 0.299 s ] -375: MSE 2976.101 RM 208.998 [ 0.023 | 0.276 ] +375: [ 2, 5] SCORE 3185.099 NV 54872 GM 4.098 GN 2.08 [ 0.201 s ] +375: MSE 2976.101 RM 208.998 [ 0.016 | 0.185 ] 375: CMIN -9.60 CAVG -0.00 CMAX 13.44 375: LSD 5.50 375: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -14154,352 +13407,577 @@ 375: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-img.mha 375: Saving vf... 375: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha -375: Load: 0.135917 -375: Run: 3.11079 -375: Save: 0.0509341 -375: Total: 3.29764 +375: Load: 0.047365 +375: Run: 1.63966 +375: Save: 0.172459 +375: Total: 1.85949 375: Finished! 375: 375: STDERR: 375: Not an error -188/578 Test #375: plm-bsp-regularize-numeric ............ Passed 3.73 sec -test 112 - Start 112: fdk-cpu-d-stats - -112: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -112: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -112: Test timeout computed to be: 1500 -89: RETVAL: 0 -89: STDOUT: Mask enabled. 512 / 54872 voxels inside mask -89: Min: 10.000 -10.000 0.000 -89: Mean: 10.000 -10.000 0.000 -89: Max: 10.000 -10.000 0.000 -89: Mean abs: 10.000 10.000 0.000 -89: Ave len: 14.142 -89: Min (mask): 10.000 -10.000 0.000 -89: Mean (mask): 10.000 -10.000 0.000 -89: Max (mask): 10.000 -10.000 0.000 -89: Mean abs (mask): 10.000 10.000 0.000 -89: Ave len (mask): 14.142 -89: -89: STDERR: -89: Not an error -189/578 Test #89: plm-compare-c ......................... Passed 0.38 sec -test 115 - Start 115: landmark-warp-a-stats-1 +165/578 Test #111: fdk-cpu-d ............................. Passed 3.80 sec +166/578 Test #375: plm-bsp-regularize-numeric ............ Passed 2.20 sec +test 562 + Start 562: proton-dose-4d -115: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -115: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -115: Test timeout computed to be: 1500 -109: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -109: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha -109: EXPECTED_ERRNO is -112: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -112: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha -112: EXPECTED_ERRNO is -85: RETVAL: 0 -85: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 -85: MAE 85.100204 MSE 18945.890625 -85: DIF 54872 NUM 54872 -85: -85: STDERR: -85: Not an error -190/578 Test #85: plm-compare-a ......................... Passed 0.47 sec -test 117 - Start 117: landmark-warp-a-stats-2 +562: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +562: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +562: Test timeout computed to be: 1500 +test 565 + Start 565: proton-dose-5a -117: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -117: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -117: Test timeout computed to be: 1500 -115: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -115: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha -115: EXPECTED_ERRNO is -83: RETVAL: 0 -83: STDOUT: Min: -9.993 -9.993 -9.993 -83: Mean: 0.000 0.000 0.000 -83: Max: 9.993 9.993 9.993 -83: Mean abs: 5.157 5.157 5.157 -83: Ave len: 9.998 -83: Jacobian: MINJAC 1.05079 MAXJAC 2.37037 -83: Energy: MINDIL 0.0502 MAXDIL 1 -83: MAXSTRAIN 1.5 TOTSTRAIN 5055.08 -83: Second derivatives: MINSECDER 0 MAXSECDER 0.114 -83: AVESECDER 0.000227 INTSECDER 2.84e+04 -83: Max second derivative at: (20 19 17) -83: -83: STDERR: -83: Not an error -191/578 Test #83: vf-radial-1-stats ..................... Passed 0.52 sec -test 120 - Start 120: landmark-warp-b-stats-1 +565: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +565: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +565: Test timeout computed to be: 1500 +549: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +549: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10 +549: EXPECTED_ERRNO is +546: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +546: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha +546: EXPECTED_ERRNO is +556: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +556: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt +556: EXPECTED_ERRNO is +562: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +562: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt +562: EXPECTED_ERRNO is +559: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +559: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt +559: EXPECTED_ERRNO is +565: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +565: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt +565: EXPECTED_ERRNO is +412: RETVAL: 0 +412: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha +412: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha +412: Launching registration worker thread +412: Inside registration worker thread +412: Doing registration stage +412: [1] xf_in->m_type = 0, xf_out->m_type = 0 +412: RESAMPLE 1 1: (4 4 4), (4 4 4) +412: RESAMPLE 1 1: (4 4 4), (4 4 4) +412: volume_calc_grad complete. +412: bspline_xform_initialize +412: Warning: vox_per_rgn was less than 4. +412: Warning: vox_per_rgn was less than 4. +412: Warning: vox_per_rgn was less than 4. +412: rdims = (3,3,3) +412: vox_per_rgn = (4,4,4) +412: cdims = (6 6 6) +412: Algorithm flavor = g +412: Threading = 0 +412: >> Checking JH allocation +412: BSPLINE PARMS +412: max_its = 20 +412: max_feval = 20 +412: BSPLINE XFORM HEADER +412: vox_per_rgn = 4 4 4 +412: roi_offset = 0 0 0 +412: roi_dim = 9 9 9 +412: img_dc = 1 0 0 0 1 0 0 0 1 +412: BST METRICS +412: MET 110100 MSE 1.000000 +412: Setting nmax, mmax = 648 27 +412: >>> START +412: This problem is unconstrained. +412: [ 0, 0] MSE 1310.066 NV 729 GM 32.312 GN 10.8 [ 0.030 s ] +412: CMIN 0.00 CAVG 0.00 CMAX 0.00 +412: LSD 0.00 +412: [ 0, 1] MSE 1295.068 NV 729 GM 32.107 GN 10.8 [ 0.029 s ] +412: CMIN -0.80 CAVG -0.00 CMAX 0.03 +412: LSD 1.00 +412: [ 0, 2] MSE 1236.886 NV 729 GM 31.289 GN 10.5 [ 0.039 s ] +412: CMIN -3.98 CAVG -0.02 CMAX 0.14 +412: LSD 5.00 +412: [ 0, 3] MSE 1033.121 NV 729 GM 28.011 GN 9.4 [ 0.032 s ] +412: CMIN -16.73 CAVG -0.10 CMAX 0.57 +412: LSD 21.00 +412: [ 1, 4] MSE 1227.425 NV 729 GM -31.287 GN 10.6 [ 0.064 s ] +412: CMIN -130.39 CAVG -0.75 CMAX 15.78 +412: LSD 145.43 +412: [ 1, 5] MSE 666.262 NV 729 GM 16.009 GN 5.49 [ 0.020 s ] +412: CMIN -63.32 CAVG -0.36 CMAX 6.81 +412: LSD 59.61 +412: [ 2, 6] MSE 1232.974 NV 729 GM -31.573 GN 10.6 [ 0.036 s ] +412: CMIN -133.31 CAVG -0.76 CMAX 26.37 +412: LSD 96.76 +412: [ 2, 7] MSE 663.364 NV 729 GM -16.837 GN 5.81 [ 0.016 s ] +412: CMIN -74.19 CAVG -0.42 CMAX 9.85 +412: LSD 15.03 +412: [ 3, 8] MSE 654.961 NV 729 GM -10.617 GN 3.9 [ 0.048 s ] +412: CMIN -69.17 CAVG -0.40 CMAX 9.75 +412: LSD 6.20 +412: [ 4, 9] MSE 648.056 NV 729 GM 16.849 GN 5.74 [ 0.016 s ] +412: CMIN -59.17 CAVG -0.35 CMAX 12.07 +412: LSD 13.05 +412: [ 4, 10] MSE 648.518 NV 729 GM 6.481 GN 2.37 [ 0.032 s ] +412: CMIN -64.64 CAVG -0.37 CMAX 10.80 +412: LSD 5.91 +412: [ 5, 11] MSE 642.586 NV 729 GM -2.800 GN 1.61 [ 0.036 s ] +412: CMIN -65.72 CAVG -0.38 CMAX 12.16 +412: LSD 3.39 +412: [ 6, 12] MSE 621.446 NV 729 GM -3.050 GN 1.62 [ 0.024 s ] +412: CMIN -65.92 CAVG -0.39 CMAX 17.36 +412: LSD 11.87 +412: [ 6, 13] MSE 550.866 NV 729 GM -6.628 GN 2.45 [ 0.032 s ] +412: CMIN -66.69 CAVG -0.41 CMAX 38.13 +412: LSD 59.33 +412: [ 7, 14] MSE 512.605 NV 729 GM -3.857 GN 1.62 [ 0.016 s ] +412: CMIN -62.22 CAVG -0.42 CMAX 47.82 +412: LSD 24.85 +412: [ 7, 15] MSE 447.450 NV 729 GM 1.527 GN 1.38 [ 0.032 s ] +412: CMIN -86.57 CAVG -0.48 CMAX 86.57 +412: LSD 124.23 +412: [ 7, 16] MSE 464.351 NV 729 GM 2.120 GN 1.3 [ 0.016 s ] +412: CMIN -65.28 CAVG -0.45 CMAX 65.28 +412: LSD 69.63 +412: [ 8, 17] MSE 472.701 NV 729 GM -6.632 GN 2.42 [ 0.020 s ] +412: CMIN -65.88 CAVG -0.45 CMAX 65.88 +412: LSD 10.76 +412: [ 8, 18] MSE 465.428 NV 729 GM 2.619 GN 1.34 [ 0.032 s ] +412: CMIN -65.36 CAVG -0.45 CMAX 65.36 +412: LSD 1.50 +412: [ 8, 19] MSE 464.475 NV 729 GM 2.117 GN 1.3 [ 0.032 s ] +412: CMIN -65.29 CAVG -0.45 CMAX 65.29 +412: LSD 0.17 +412: [ 8, 20] MSE 464.365 NV 729 GM 2.120 GN 1.3 [ 0.032 s ] +412: CMIN -65.28 CAVG -0.45 CMAX 65.28 +412: LSD 0.02 +412: [2] xf_out->m_type = 9, xf_in->m_type = 0 +412: Doing registration stage +412: [1] xf_in->m_type = 9, xf_out->m_type = 0 +412: RESAMPLE 1 1: (1 1 1), (1 1 1) +412: RESAMPLE 1 1: (1 1 1), (1 1 1) +412: volume_calc_grad complete. +412: bspline_xform_initialize +412: Warning: vox_per_rgn was less than 4. +412: Warning: vox_per_rgn was less than 4. +412: Warning: vox_per_rgn was less than 4. +412: rdims = (10,10,10) +412: vox_per_rgn = (4,4,4) +412: cdims = (13 13 13) +412: Algorithm flavor = g +412: Threading = 0 +412: >> Checking JH allocation +412: BSPLINE PARMS +412: max_its = 20 +412: max_feval = 20 +412: BSPLINE XFORM HEADER +412: vox_per_rgn = 4 4 4 +412: roi_offset = 0 0 0 +412: roi_dim = 38 38 38 +412: img_dc = 1 0 0 0 1 0 0 0 1 +412: BST METRICS +412: MET 110100 MSE 1.000000 +412: Setting nmax, mmax = 6591 83 +412: >>> START +412: This problem is unconstrained. +412: [ 0, 0] MSE 2187.416 NV 54548 GM -54.885 GN 20.1 [ 0.020 s ] +412: CMIN -34.32 CAVG -2.98 CMAX 34.99 +412: LSD 0.00 +412: [ 0, 1] MSE 2164.676 NV 54548 GM -53.547 GN 19.7 [ 0.028 s ] +412: CMIN -34.32 CAVG -2.98 CMAX 34.99 +412: LSD 1.00 +412: [ 0, 2] MSE 2077.643 NV 54548 GM -48.153 GN 18.1 [ 0.052 s ] +412: CMIN -34.32 CAVG -2.98 CMAX 34.99 +412: LSD 5.00 +412: [ 1, 3] MSE 1531.465 NV 54548 GM -5.028 GN 6.72 [ 0.017 s ] +412: CMIN -34.32 CAVG -2.97 CMAX 34.99 +412: LSD 49.50 +412: [ 2, 4] MSE 1454.329 NV 54548 GM 33.264 GN 9.36 [ 0.031 s ] +412: CMIN -34.74 CAVG -2.96 CMAX 34.99 +412: LSD 27.82 +412: [ 3, 5] MSE 1285.873 NV 54548 GM 41.621 GN 9.3 [ 0.024 s ] +412: CMIN -38.62 CAVG -2.96 CMAX 34.99 +412: LSD 33.32 +412: [ 4, 6] MSE 601.694 NV 54548 GM -58.120 GN 12.7 [ 0.021 s ] +412: CMIN -66.67 CAVG -3.01 CMAX 47.45 +412: LSD 225.15 +412: [ 5, 7] MSE 543.836 NV 54548 GM 31.901 GN 9.57 [ 0.071 s ] +412: CMIN -66.22 CAVG -2.99 CMAX 59.99 +412: LSD 53.14 +412: [ 6, 8] MSE 418.242 NV 54548 GM 12.804 GN 3.31 [ 0.032 s ] +412: CMIN -65.97 CAVG -3.00 CMAX 53.84 +412: LSD 23.35 +412: [ 7, 9] MSE 404.446 NV 54548 GM -9.046 GN 2.82 [ 0.016 s ] +412: CMIN -67.92 CAVG -3.00 CMAX 54.77 +412: LSD 12.26 +412: [ 8, 10] MSE 385.397 NV 54548 GM -5.940 GN 2.61 [ 0.015 s ] +412: CMIN -68.58 CAVG -3.00 CMAX 55.54 +412: LSD 8.37 +412: [ 9, 11] MSE 330.971 NV 54548 GM -28.234 GN 4.05 [ 0.015 s ] +412: CMIN -72.02 CAVG -3.01 CMAX 62.09 +412: LSD 44.90 +412: [10, 12] MSE 292.026 NV 54548 GM -5.908 GN 2.66 [ 0.015 s ] +412: CMIN -74.57 CAVG -3.00 CMAX 67.66 +412: LSD 33.62 +412: [11, 13] MSE 251.369 NV 54548 GM 4.024 GN 2.37 [ 0.015 s ] +412: CMIN -84.98 CAVG -2.99 CMAX 73.83 +412: LSD 50.34 +412: [12, 14] MSE 228.758 NV 54548 GM 11.643 GN 4.01 [ 0.015 s ] +412: CMIN -98.90 CAVG -2.97 CMAX 76.10 +412: LSD 60.96 +412: [13, 15] MSE 306.308 NV 54548 GM 49.796 GN 7.96 [ 0.015 s ] +412: CMIN -130.24 CAVG -2.94 CMAX 83.22 +412: LSD 135.53 +412: [13, 16] MSE 226.800 NV 54548 GM 20.941 GN 4.12 [ 0.019 s ] +412: CMIN -103.93 CAVG -2.96 CMAX 76.84 +412: LSD 21.75 +412: [14, 17] MSE 205.578 NV 54548 GM 24.444 GN 3.6 [ 0.026 s ] +412: CMIN -117.55 CAVG -2.96 CMAX 78.37 +412: LSD 53.89 +412: [15, 18] MSE 158.105 NV 54548 GM 6.383 GN 1.69 [ 0.025 s ] +412: CMIN -116.51 CAVG -2.96 CMAX 72.95 +412: LSD 24.10 +412: [16, 19] MSE 139.232 NV 54548 GM -1.923 GN 1.28 [ 0.026 s ] +412: CMIN -119.83 CAVG -2.96 CMAX 72.22 +412: LSD 15.80 +412: [17, 20] MSE 119.453 NV 54548 GM -6.009 GN 1.45 [ 0.016 s ] +412: CMIN -128.50 CAVG -2.96 CMAX 71.16 +412: LSD 33.91 +412: [2] xf_out->m_type = 9, xf_in->m_type = 9 +412: ** Registration worker thread finished. +412: Warping... +412: Running: plm_warp_native +412: Converting input image... +412: Converting xform... +412: bspline_xform_initialize +412: rdims = (10,10,10) +412: vox_per_rgn = (4,4,4) +412: cdims = (13 13 13) +412: Creating output volume... +412: Running native warper... +412: bspline_warp complete. +412: Back convert to original type... +412: plm_warp_native is complete. +412: Saving image... +412: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd +412: Load: 0.0502949 +412: Run: 1.18191 +412: Save: 0.0573962 +412: Total: 1.2896 +412: Finished! +412: +412: STDERR: +412: Not an error +540: RETVAL: 0 +540: STDOUT: about to xform_convert +540: Converting to (itk) vector field +540: did xform_convert +540: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd +540: +540: STDERR: +540: Not an error +167/578 Test #412: plm-reg-multi-b ....................... Passed 1.56 sec +test 568 + Start 568: proton-dose-5d -120: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -120: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -120: Test timeout computed to be: 1500 -100: RETVAL: 0 -100: STDOUT: Image center: 63.5 63.5 -100: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 -100: MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384 -100: -100: STDERR: -100: Not an error -192/578 Test #100: drr-a-stats ........................... Passed 0.24 sec -103: RETVAL: 0 -103: STDOUT: Image center: 63.5 63.5 -103: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 -103: MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384 -103: -103: STDERR: -test 122 - Start 122: landmark-warp-b-stats-2 +568: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +568: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +568: Test timeout computed to be: 1500 +168/578 Test #540: plm-xf-convert-h ...................... Passed 0.16 sec +test 571 + Start 571: proton-dose-6a -122: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -122: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -122: Test timeout computed to be: 1500 -103: Not an error -193/578 Test #103: drr-b-stats ........................... Passed 0.20 sec -test 125 - Start 125: landmark-warp-c-stats-1 +571: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-6a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +571: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +571: Test timeout computed to be: 1500 +568: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +568: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt +568: EXPECTED_ERRNO is +543: RETVAL: 0 +543: STDOUT: bspline_xform_initialize +543: rdims = (1,1,1) +543: vox_per_rgn = (4,4,4) +543: cdims = (4 4 4) +543: about to xform_convert +543: Converting to (itk) vector field +543: did xform_convert +543: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd +543: +543: STDERR: +543: Not an error +169/578 Test #543: plm-xf-convert-i ...................... Passed 0.19 sec +test 39 + Start 39: rect-10 -125: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -125: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -125: Test timeout computed to be: 1500 -117: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -117: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha -117: EXPECTED_ERRNO is -120: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -120: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha -120: EXPECTED_ERRNO is -122: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -122: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha -122: EXPECTED_ERRNO is -125: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -125: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha -125: EXPECTED_ERRNO is -106: RETVAL: 0 -106: STDOUT: Image center: 63.5 63.5 -106: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 -106: MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384 -106: -106: STDERR: -106: Not an error -194/578 Test #106: drr-c-stats ........................... Passed 0.25 sec -test 127 - Start 127: landmark-warp-c-stats-2 +39: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +39: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +39: Test timeout computed to be: 1500 +571: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +571: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt +571: EXPECTED_ERRNO is +546: RETVAL: 0 +546: STDOUT: Paste and smooth loop +546: Iteration 0/20 +546: Convolving +546: Iteration 1/20 +546: Convolving +546: Iteration 2/20 +546: Convolving +546: Iteration 3/20 +546: Convolving +546: Iteration 4/20 +546: Convolving +546: Iteration 5/20 +546: Convolving +546: Iteration 6/20 +546: Convolving +546: Iteration 7/20 +546: Convolving +546: Iteration 8/20 +546: Convolving +546: Iteration 9/20 +546: Convolving +546: Iteration 10/20 +546: Convolving +546: Iteration 11/20 +546: Convolving +546: Iteration 12/20 +546: Convolving +546: Iteration 13/20 +546: Convolving +546: Iteration 14/20 +546: Convolving +546: Iteration 15/20 +546: Convolving +546: Iteration 16/20 +546: Convolving +546: Iteration 17/20 +546: Convolving +546: Iteration 18/20 +546: Convolving +546: Iteration 19/20 +546: Convolving +546: Done. +546: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha +546: +546: STDERR: +546: Not an error +39: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +39: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50 +39: EXPECTED_ERRNO is +170/578 Test #546: xf-invert-vf-zero-1 ................... Passed 0.20 sec +534: RETVAL: 0 +534: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm) +534: BSplineDeformableTransform (0x5636d74e3860) +534: RTTI typeinfo: itk::BSplineDeformableTransform +534: Reference Count: 3 +534: Modified Time: 1477 +534: Debug: Off +534: Object Name: +534: Observers: +534: none +534: CoefficientImage: [ 0x5636d74e2ef0, 0x5636d74dbcf0, 0x5636d74dbfb0 ] +534: ValidRegion: ImageRegion (0x5636d74e39a8) +534: Dimension: 3 +534: Index: [1, 1, 1] +534: Size: [3, 3, 3] +534: +534: BulkTransform: 0x5636d74dc8f0 +534: WeightsFunction: 0x5636d74f0f10 +534: BulkTransformType: IdentityTransform +534: GridOrigin: [-53.2895, -53.2895, -53.2895] +534: GridSpacing: [28.9474, 28.9474, 28.9474] +534: GridDirection: 1 0 0 +534: 0 1 0 +534: 0 0 1 +534: +534: GridRegion: ImageRegion (0x5636d74e30f8) +534: Dimension: 3 +534: Index: [0, 0, 0] +534: Size: [5, 5, 5] +534: +534: Setting PIH from M_IMG +534: PIH is: +534: Origin = -25.0000 -25.0000 -25.0000 +534: Size = 38 38 38 +534: Spacing = 1.3158 1.3158 1.3158 +534: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +534: Rt_study_warp: Warping m_img +534: plm_warp_itk: xform_to_itk_vf +534: plm_warp_itk: convert_to_itk +534: plm_warp_itk: warping... +534: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd) +534: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd +534: Rt_study_warp: warp and save ss. +534: Finished! +534: +534: STDERR: +test 42 + Start 42: rect-11 -127: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -127: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -127: Test timeout computed to be: 1500 -127: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -127: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha -127: EXPECTED_ERRNO is -109: RETVAL: 0 -109: STDOUT: MIN -1000.000000 AVE -999.859619 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 -109: -109: STDERR: -109: Not an error -195/578 Test #109: fdk-cpu-a-stats ....................... Passed 0.30 sec -test 131 - Start 131: plm-add-a-stats +42: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-11" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +42: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +42: Test timeout computed to be: 1500 +534: Not an error +171/578 Test #534: plm-xf-convert-d-warp-2 ............... Passed 0.24 sec +test 51 + Start 51: rect-19 -131: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -131: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -131: Test timeout computed to be: 1500 -120: RETVAL: 0 -120: STDOUT: MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872 -120: -120: STDERR: -120: Not an error -196/578 Test #120: landmark-warp-b-stats-1 ............... Passed 0.25 sec -test 134 - Start 134: plm-add-b-stats +51: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-19" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +51: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +51: Test timeout computed to be: 1500 +42: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +42: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60 +42: EXPECTED_ERRNO is +51: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +51: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150 +51: EXPECTED_ERRNO is +531: RETVAL: 0 +531: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-xf-convert.txt) +531: bspline_xform_initialize +531: rdims = (2,2,2) +531: vox_per_rgn = (11,11,11) +531: cdims = (5 5 5) +531: Setting PIH from XFORM +531: PIH is: +531: Origin = -24.3421 -24.3421 -24.3421 +531: Size = 19 19 19 +531: Spacing = 2.6316 2.6316 2.6316 +531: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +531: Rt_study_warp: Warping m_img +531: Running: plm_warp_native +531: Converting input image... +531: Converting xform... +531: bspline_xform_initialize +531: rdims = (2,2,2) +531: vox_per_rgn = (11,11,11) +531: cdims = (5 5 5) +531: Creating output vf... +531: Creating output volume... +531: Running native warper... +531: bspline_warp complete. +531: Back convert to original type... +531: > Convert vf to itk +531: > Conversion complete. +531: plm_warp_native is complete. +531: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd) +531: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd +531: Rt_study_warp: warp and save ss. +531: Finished! +531: +531: STDERR: +531: Not an error +172/578 Test #531: plm-xf-convert-d-warp-1 ............... Passed 0.30 sec +test 53 + Start 53: rectarr-01 -134: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -134: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -134: Test timeout computed to be: 1500 -131: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -131: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd -131: EXPECTED_ERRNO is -125: RETVAL: 0 -125: STDOUT: MIN -1000.000122 AVE -991.665894 MAX 0.000000 NONZERO 54484 NUMVOX 54872 -125: -125: STDERR: -125: Not an error -197/578 Test #125: landmark-warp-c-stats-1 ............... Passed 0.25 sec -test 137 - Start 137: plm-add-vf-a-stats +53: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +53: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +53: Test timeout computed to be: 1500 +53: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +53: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5 +53: EXPECTED_ERRNO is +549: RETVAL: 0 +549: STDOUT: Paste and smooth loop +549: Iteration 0/10 +549: Convolving +549: Iteration 1/10 +549: Convolving +549: Iteration 2/10 +549: Convolving +549: Iteration 3/10 +549: Convolving +549: Iteration 4/10 +549: Convolving +549: Iteration 5/10 +549: Convolving +549: Iteration 6/10 +549: Convolving +549: Iteration 7/10 +549: Convolving +549: Iteration 8/10 +549: Convolving +549: Iteration 9/10 +549: Convolving +549: Done. +549: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha +549: +549: STDERR: +549: Not an error +173/578 Test #549: xf-invert-vf-trans-1 .................. Passed 0.25 sec +test 54 + Start 54: rectarr-02 -137: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -137: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -137: Test timeout computed to be: 1500 -122: RETVAL: 0 -122: STDOUT: Min: -30.672 -0.800 -0.000 -122: Mean: -1.500 0.018 0.000 -122: Max: 0.000 1.506 0.000 -122: Mean abs: 1.500 0.042 0.000 -122: Ave len: 1.502 -122: Jacobian: MINJAC 0.647844 MAXJAC 1.23013 -122: Energy: MINDIL -0.353 MAXDIL 0.231386 -122: MAXSTRAIN 0.259 TOTSTRAIN 179.715 -122: Second derivatives: MINSECDER 0 MAXSECDER 0.0443 -122: AVESECDER 0.000472 INTSECDER 5.89e+04 -122: Max second derivative at: (17 23 15) -122: -122: STDERR: -122: Not an error -134: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -134: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd -134: EXPECTED_ERRNO is -117: RETVAL: 0 -117: STDOUT: Min: -62.465 -4.112 -0.000 -117: Mean: -22.960 0.011 0.000 -117: Max: 16.278 4.199 0.000 -117: Mean abs: 25.589 1.505 0.000 -117: Ave len: 25.766 -117: Jacobian: MINJAC 1.12686 MAXJAC 1.15895 -117: Energy: MINDIL 0.128 MAXDIL 0.157995 -117: MAXSTRAIN 0.171 TOTSTRAIN 7133.92 -117: Second derivatives: MINSECDER 2.92e-10 MAXSECDER 0.000557 -117: AVESECDER 7.93e-07 INTSECDER 99.2 -117: Max second derivative at: (24 15 22) -117: -117: STDERR: -117: Not an error -198/578 Test #122: landmark-warp-b-stats-2 ............... Passed 0.27 sec -112: RETVAL: 0 -112: STDOUT: MIN -1000.000000 AVE -999.848633 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 -112: -112: STDERR: -test 140 - Start 140: plm-add-vf-b-stats +54: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +54: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +54: Test timeout computed to be: 1500 +54: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +54: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5 +54: EXPECTED_ERRNO is +39: RETVAL: 0 +39: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha +39: +39: STDERR: +39: Not an error +174/578 Test #39: rect-10 ............................... Passed 0.12 sec +test 55 + Start 55: rectarr-m-01 -140: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -140: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -140: Test timeout computed to be: 1500 -112: Not an error -199/578 Test #112: fdk-cpu-d-stats ....................... Passed 0.34 sec -200/578 Test #117: landmark-warp-a-stats-2 ............... Passed 0.31 sec -test 143 - Start 143: plm-adjust-a-stats +55: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +55: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +55: Test timeout computed to be: 1500 +51: RETVAL: 0 +51: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha +51: +51: STDERR: +51: Not an error +175/578 Test #51: rect-19 ............................... Passed 0.10 sec +test 56 + Start 56: rectarr-m-02 -143: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -143: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -143: Test timeout computed to be: 1500 -test 146 - Start 146: plm-adjust-b-stats +56: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +56: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +56: Test timeout computed to be: 1500 +55: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +55: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13 +55: EXPECTED_ERRNO is +42: RETVAL: 0 +42: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha +42: +42: STDERR: +42: Not an error +176/578 Test #42: rect-11 ............................... Passed 0.13 sec +test 61 + Start 61: roi-1 -146: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -146: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -146: Test timeout computed to be: 1500 -137: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -137: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd -137: EXPECTED_ERRNO is -556: RETVAL: 0 -556: STDOUT: -556: [PLAN] -556: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha -556: target : -556: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha -556: debug : 0 -556: dose norm : 70 -556: -556: [SETTINGS] -556: flavor: a ** -556: homo_approx: n ** -556: ray_step: 1 ** -556: aperture_out: ** -556: proj_dose_out: ** -556: proj_img_out: ** -556: range_comp_out: ** -556: sigma_out: ** -556: wed_out: ** -556: beam_weight: 1 ** -556: -556: [GEOMETRY & APERTURE] -556: source: 0 -2000 0 ** -556: isocenter: 0 0 0 ** -556: vup: 0 0 1 ** -556: offset: 1500 ** -556: ap_center in pixels: 10 10 ** -556: i_res: 21 21 ** -556: spacing: 1 1 ** -556: source_size: 0 ** -556: ap_file_in: ** -556: rc_file_in: ** -556: smearing: 0 ** -556: -556: [PEAK] -556: E0: P0 -556: spread: P0 -556: weight: P0 -556: -556: Start dose calculation Beam 1 -556: Plan_calc::compute_beam_dose(beam) entry -- -556: Setting RVRTS = 1 -556: FPD = 347.500001, BPD = 647.528776 -556: 21 21 301 -556: Setting RVRTS = 1 -556: FPD = 347.500001, BPD = 647.528776 -556: 21 21 301 -556: Priority 4. Prescription depths detected. Any target depth will not be considered. -556: prescription min/max: 70 mm, 90 mm. -556: -556: 16 Mono-energetic BP used: -556: 111 110 109 108 107 106 105 104 103 102 101 100 99 98 97 96 -556: Adding peak to sobp (111.000000, 1.000000, 0.892866) [0.010000, 111.000000] -556: Adding peak to sobp (110.000000, 1.000000, 0.199040) [0.010000, 111.000000] -556: Adding peak to sobp (109.000000, 1.000000, 0.226753) [0.010000, 111.000000] -556: Adding peak to sobp (108.000000, 1.000000, 0.173442) [0.010000, 111.000000] -556: Adding peak to sobp (107.000000, 1.000000, 0.151005) [0.010000, 111.000000] -556: Adding peak to sobp (106.000000, 1.000000, 0.133983) [0.010000, 111.000000] -556: Adding peak to sobp (105.000000, 1.000000, 0.120333) [0.010000, 111.000000] -556: Adding peak to sobp (104.000000, 1.000000, 0.111431) [0.010000, 111.000000] -556: Adding peak to sobp (103.000000, 1.000000, 0.102203) [0.010000, 111.000000] -556: Adding peak to sobp (102.000000, 1.000000, 0.095667) [0.010000, 111.000000] -556: Adding peak to sobp (101.000000, 1.000000, 0.089522) [0.010000, 111.000000] -556: Adding peak to sobp (100.000000, 1.000000, 0.084473) [0.010000, 111.000000] -556: Adding peak to sobp (99.000000, 1.000000, 0.079452) [0.010000, 111.000000] -556: Adding peak to sobp (98.000000, 1.000000, 0.078322) [0.010000, 111.000000] -556: Adding peak to sobp (97.000000, 1.000000, 0.063062) [0.010000, 111.000000] -556: Adding peak to sobp (96.000000, 1.000000, 0.099306) [0.010000, 111.000000] -556: **** (1) -556: Raw dose at the maximum (0, -30, 0) : 0.999508 A.U. -556: Dose normalized at the maximum to 1 x 70 Gy. -556: Primary PB num. x, y: 21, 21, primary PB res. x, y: 1 PB/mm, 1 PB/mm -556: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha -556: Sigma: 0.000000 seconds -556: Calc: 1.094914 seconds -556: IO: 0.046928 seconds -556: Reformat: 0.000000 seconds -556: Misc: 0.010711 seconds -556: done. -556: -556: Total execution time : 1.204137 seconds. -556: -556: STDERR: -556: Not an error -201/578 Test #556: proton-dose-1 ......................... Passed 1.50 sec -test 149 - Start 149: plm-adjust-c-stats +61: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=roi-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +61: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +61: Test timeout computed to be: 1500 +56: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +56: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13 +56: EXPECTED_ERRNO is +53: RETVAL: 0 +53: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha +53: +53: STDERR: +53: Not an error +177/578 Test #53: rectarr-01 ............................ Passed 0.12 sec +test 65 + Start 65: sphere-4 -149: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -149: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -149: Test timeout computed to be: 1500 -115: RETVAL: 0 -115: STDOUT: MIN -1000.000000 AVE -991.799744 MAX 0.000000 NONZERO 54494 NUMVOX 54872 -115: -115: STDERR: -115: Not an error -202/578 Test #115: landmark-warp-a-stats-1 ............... Passed 0.35 sec -test 152 - Start 152: plm-adjust-d-stats +65: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +65: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +65: Test timeout computed to be: 1500 +61: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +61: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300 +61: EXPECTED_ERRNO is +65: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +65: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150 +65: EXPECTED_ERRNO is +54: RETVAL: 0 +54: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha +54: +54: STDERR: +54: Not an error +178/578 Test #54: rectarr-02 ............................ Passed 0.12 sec +test 77 + Start 77: vf-zero-stats -152: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -152: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -152: Test timeout computed to be: 1500 -140: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -140: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd -140: EXPECTED_ERRNO is +77: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-zero-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +77: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +77: Test timeout computed to be: 1500 433: RETVAL: 0 433: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 433: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -14818,14 +14296,430 @@ 433: plm_warp_itk: warping... 433: Saving image... 433: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha -433: Load: 0.0639651 -433: Run: 2.36706 -433: Save: 0.00733209 -433: Total: 2.43836 +433: Load: 0.0353329 +433: Run: 1.13099 +433: Save: 0.00447702 +433: Total: 1.1708 433: Finished! 433: 433: STDERR: 433: Not an error +179/578 Test #433: plm-reg-trans-mi-a .................... Passed 1.55 sec +test 79 + Start 79: vf-trans-1-stats + +79: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +79: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +79: Test timeout computed to be: 1500 +77: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +77: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha +77: EXPECTED_ERRNO is +79: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +79: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha +79: EXPECTED_ERRNO is +55: RETVAL: 0 +55: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha +55: +55: STDERR: +55: Not an error +180/578 Test #55: rectarr-m-01 .......................... Passed 0.14 sec +test 81 + Start 81: vf-trans-2-stats + +81: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +81: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +81: Test timeout computed to be: 1500 +81: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +81: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha +81: EXPECTED_ERRNO is +56: RETVAL: 0 +56: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha +56: +56: STDERR: +56: Not an error +181/578 Test #56: rectarr-m-02 .......................... Passed 0.14 sec +test 83 + Start 83: vf-radial-1-stats + +83: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +83: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +83: Test timeout computed to be: 1500 +65: RETVAL: 0 +65: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha +65: +65: STDERR: +65: Not an error +182/578 Test #65: sphere-4 .............................. Passed 0.11 sec +test 85 + Start 85: plm-compare-a + +85: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +85: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +85: Test timeout computed to be: 1500 +83: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +83: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha +83: EXPECTED_ERRNO is +61: RETVAL: 0 +61: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha +61: +61: STDERR: +61: Not an error +183/578 Test #61: roi-1 ................................. Passed 0.15 sec +test 87 + Start 87: plm-compare-b + +87: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +87: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +87: Test timeout computed to be: 1500 +85: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +85: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +85: EXPECTED_ERRNO is +87: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +87: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha +87: EXPECTED_ERRNO is +79: RETVAL: 0 +79: STDOUT: Min: 10.000 0.000 0.000 +79: Mean: 10.000 0.000 0.000 +79: Max: 10.000 0.000 0.000 +79: Mean abs: 10.000 0.000 0.000 +79: Ave len: 10.000 +79: Jacobian: MINJAC 1 MAXJAC 1 +79: Energy: MINDIL 0 MAXDIL 0 +79: MAXSTRAIN 0 TOTSTRAIN 0 +79: Second derivatives: MINSECDER 0 MAXSECDER 0 +79: AVESECDER 0 INTSECDER 0 +79: Max second derivative at: (1 1 1) +79: +79: STDERR: +79: Not an error +184/578 Test #79: vf-trans-1-stats ...................... Passed 0.14 sec +test 89 + Start 89: plm-compare-c + +89: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +89: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +89: Test timeout computed to be: 1500 +77: RETVAL: 0 +77: STDOUT: Min: 0.000 0.000 0.000 +77: Mean: 0.000 0.000 0.000 +77: Max: 0.000 0.000 0.000 +77: Mean abs: 0.000 0.000 0.000 +77: Ave len: 0.000 +77: Jacobian: MINJAC 1 MAXJAC 1 +77: Energy: MINDIL 0 MAXDIL 0 +77: MAXSTRAIN 0 TOTSTRAIN 0 +77: Second derivatives: MINSECDER 0 MAXSECDER 0 +77: AVESECDER 0 INTSECDER 0 +77: Max second derivative at: (1 1 1) +77: +77: STDERR: +77: Not an error +185/578 Test #77: vf-zero-stats ......................... Passed 0.17 sec +test 92 + Start 92: plm-diff-a-stats + +92: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +92: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +92: Test timeout computed to be: 1500 +81: RETVAL: 0 +81: STDOUT: Min: 0.000 10.000 0.000 +81: Mean: 0.000 10.000 0.000 +81: Max: 0.000 10.000 0.000 +81: Mean abs: 0.000 10.000 0.000 +81: Ave len: 10.000 +81: Jacobian: MINJAC 1 MAXJAC 1 +81: Energy: MINDIL 0 MAXDIL 0 +81: MAXSTRAIN 0 TOTSTRAIN 0 +81: Second derivatives: MINSECDER 0 MAXSECDER 0 +81: AVESECDER 0 INTSECDER 0 +81: Max second derivative at: (1 1 1) +81: +81: STDERR: +81: Not an error +89: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +89: PARMS is compare;--mask;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha +89: EXPECTED_ERRNO is +186/578 Test #81: vf-trans-2-stats ...................... Passed 0.12 sec +test 95 + Start 95: plm-diff-b-stats + +95: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +95: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +95: Test timeout computed to be: 1500 +92: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +92: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha +92: EXPECTED_ERRNO is +95: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +95: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha +95: EXPECTED_ERRNO is +83: RETVAL: 0 +83: STDOUT: Min: -9.993 -9.993 -9.993 +83: Mean: 0.000 0.000 0.000 +83: Max: 9.993 9.993 9.993 +83: Mean abs: 5.157 5.157 5.157 +83: Ave len: 9.998 +83: Jacobian: MINJAC 1.05079 MAXJAC 2.37037 +83: Energy: MINDIL 0.0502 MAXDIL 1 +83: MAXSTRAIN 1.5 TOTSTRAIN 5055.08 +83: Second derivatives: MINSECDER 0 MAXSECDER 0.114 +83: AVESECDER 0.000227 INTSECDER 2.84e+04 +83: Max second derivative at: (20 19 17) +83: +83: STDERR: +87: RETVAL: 0 +87: STDOUT: Min: 10.000 -10.000 0.000 +87: Mean: 10.000 -10.000 0.000 +87: Max: 10.000 -10.000 0.000 +87: Mean abs: 10.000 10.000 0.000 +87: Ave len: 14.142 +87: +87: STDERR: +85: RETVAL: 0 +85: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 +85: MAE 85.100204 MSE 18945.890625 +85: DIF 54872 NUM 54872 +85: +85: STDERR: +87: Not an error +85: Not an error +187/578 Test #87: plm-compare-b ......................... Passed 0.12 sec +83: Not an error +test 97 + Start 97: demons-a + +97: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=demons-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/demons" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=-m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +97: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +97: Test timeout computed to be: 1500 +188/578 Test #85: plm-compare-a ......................... Passed 0.13 sec +189/578 Test #83: vf-radial-1-stats ..................... Passed 0.14 sec +test 100 + Start 100: drr-a-stats + +100: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +100: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +100: Test timeout computed to be: 1500 +test 103 + Start 103: drr-b-stats + +103: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-b/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +103: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +103: Test timeout computed to be: 1500 +97: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/demons +97: PARMS is -m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +97: EXPECTED_ERRNO is +103: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +103: PARMS is stats;drr-b/out_0010.pfm +103: EXPECTED_ERRNO is +100: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +100: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm +100: EXPECTED_ERRNO is +92: RETVAL: 0 +92: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872 +92: +92: STDERR: +92: Not an error +89: RETVAL: 0 +89: STDOUT: Mask enabled. 512 / 54872 voxels inside mask +89: Min: 10.000 -10.000 0.000 +89: Mean: 10.000 -10.000 0.000 +89: Max: 10.000 -10.000 0.000 +89: Mean abs: 10.000 10.000 0.000 +89: Ave len: 14.142 +89: Min (mask): 10.000 -10.000 0.000 +89: Mean (mask): 10.000 -10.000 0.000 +89: Max (mask): 10.000 -10.000 0.000 +89: Mean abs (mask): 10.000 10.000 0.000 +89: Ave len (mask): 14.142 +89: +89: STDERR: +89: Not an error +95: RETVAL: 0 +95: STDOUT: Min: 10.000 -10.000 0.000 +95: Mean: 10.000 -10.000 0.000 +95: Max: 10.000 -10.000 0.000 +95: Mean abs: 10.000 10.000 0.000 +95: Ave len: 14.142 +95: Jacobian: MINJAC 1 MAXJAC 1 +95: Energy: MINDIL 0 MAXDIL 0 +95: MAXSTRAIN 0 TOTSTRAIN 0 +95: Second derivatives: MINSECDER 0 MAXSECDER 0 +95: AVESECDER 0 INTSECDER 0 +95: Max second derivative at: (1 1 1) +95: +95: STDERR: +95: Not an error +190/578 Test #92: plm-diff-a-stats ...................... Passed 0.13 sec +test 106 + Start 106: drr-c-stats + +106: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-c/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +106: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +106: Test timeout computed to be: 1500 +191/578 Test #89: plm-compare-c ......................... Passed 0.14 sec +192/578 Test #95: plm-diff-b-stats ...................... Passed 0.12 sec +test 109 + Start 109: fdk-cpu-a-stats + +109: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +109: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +109: Test timeout computed to be: 1500 +test 112 + Start 112: fdk-cpu-d-stats + +112: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +112: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +112: Test timeout computed to be: 1500 +556: RETVAL: 0 +556: STDOUT: +556: [PLAN] +556: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha +556: target : +556: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha +556: debug : 0 +556: dose norm : 70 +556: +556: [SETTINGS] +556: flavor: a ** +556: homo_approx: n ** +556: ray_step: 1 ** +556: aperture_out: ** +556: proj_dose_out: ** +556: proj_img_out: ** +556: range_comp_out: ** +556: sigma_out: ** +556: wed_out: ** +556: beam_weight: 1 ** +556: +556: [GEOMETRY & APERTURE] +556: source: 0 -2000 0 ** +556: isocenter: 0 0 0 ** +556: vup: 0 0 1 ** +556: offset: 1500 ** +556: ap_center in pixels: 10 10 ** +556: i_res: 21 21 ** +556: spacing: 1 1 ** +556: source_size: 0 ** +556: ap_file_in: ** +556: rc_file_in: ** +556: smearing: 0 ** +556: +556: [PEAK] +556: E0: P0 +556: spread: P0 +556: weight: P0 +556: +556: Start dose calculation Beam 1 +556: Plan_calc::compute_beam_dose(beam) entry -- +556: Setting RVRTS = 1 +556: FPD = 347.500001, BPD = 647.528776 +556: 21 21 301 +556: Setting RVRTS = 1 +556: FPD = 347.500001, BPD = 647.528776 +556: 21 21 301 +556: Priority 4. Prescription depths detected. Any target depth will not be considered. +556: prescription min/max: 70 mm, 90 mm. +556: +556: 16 Mono-energetic BP used: +556: 111 110 109 108 107 106 105 104 103 102 101 100 99 98 97 96 +556: Adding peak to sobp (111.000000, 1.000000, 0.892866) [0.010000, 111.000000] +556: Adding peak to sobp (110.000000, 1.000000, 0.199040) [0.010000, 111.000000] +556: Adding peak to sobp (109.000000, 1.000000, 0.226753) [0.010000, 111.000000] +556: Adding peak to sobp (108.000000, 1.000000, 0.173442) [0.010000, 111.000000] +556: Adding peak to sobp (107.000000, 1.000000, 0.151005) [0.010000, 111.000000] +556: Adding peak to sobp (106.000000, 1.000000, 0.133983) [0.010000, 111.000000] +556: Adding peak to sobp (105.000000, 1.000000, 0.120333) [0.010000, 111.000000] +556: Adding peak to sobp (104.000000, 1.000000, 0.111431) [0.010000, 111.000000] +556: Adding peak to sobp (103.000000, 1.000000, 0.102203) [0.010000, 111.000000] +556: Adding peak to sobp (102.000000, 1.000000, 0.095667) [0.010000, 111.000000] +556: Adding peak to sobp (101.000000, 1.000000, 0.089522) [0.010000, 111.000000] +556: Adding peak to sobp (100.000000, 1.000000, 0.084473) [0.010000, 111.000000] +556: Adding peak to sobp (99.000000, 1.000000, 0.079452) [0.010000, 111.000000] +556: Adding peak to sobp (98.000000, 1.000000, 0.078322) [0.010000, 111.000000] +556: Adding peak to sobp (97.000000, 1.000000, 0.063062) [0.010000, 111.000000] +556: Adding peak to sobp (96.000000, 1.000000, 0.099306) [0.010000, 111.000000] +556: **** (1) +556: Raw dose at the maximum (0, -30, 0) : 0.999508 A.U. +556: Dose normalized at the maximum to 1 x 70 Gy. +556: Primary PB num. x, y: 21, 21, primary PB res. x, y: 1 PB/mm, 1 PB/mm +556: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha +556: Sigma: 0.000000 seconds +556: Calc: 0.476573 seconds +556: IO: 0.018358 seconds +556: Reformat: 0.000000 seconds +556: Misc: 0.002758 seconds +556: done. +556: +556: Total execution time : 0.510020 seconds. +556: +556: STDERR: +556: Not an error +193/578 Test #556: proton-dose-1 ......................... Passed 0.68 sec +test 115 + Start 115: landmark-warp-a-stats-1 + +115: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +115: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +115: Test timeout computed to be: 1500 +106: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +106: PARMS is stats;drr-c/out_0010.pfm +106: EXPECTED_ERRNO is +109: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +109: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha +109: EXPECTED_ERRNO is +112: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +112: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha +112: EXPECTED_ERRNO is +115: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +115: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha +115: EXPECTED_ERRNO is +103: RETVAL: 0 +103: STDOUT: Image center: 63.5 63.5 +103: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 +103: MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384 +103: +103: STDERR: +103: Not an error +100: RETVAL: 0 +100: STDOUT: Image center: 63.5 63.5 +100: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 +100: MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384 +100: +100: STDERR: +100: Not an error +194/578 Test #103: drr-b-stats ........................... Passed 0.14 sec +test 117 + Start 117: landmark-warp-a-stats-2 + +117: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +117: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +117: Test timeout computed to be: 1500 +195/578 Test #100: drr-a-stats ........................... Passed 0.14 sec +test 120 + Start 120: landmark-warp-b-stats-1 + +120: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +120: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +120: Test timeout computed to be: 1500 +117: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +117: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha +117: EXPECTED_ERRNO is +120: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +120: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha +120: EXPECTED_ERRNO is +106: RETVAL: 0 +106: STDOUT: Image center: 63.5 63.5 +106: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 +106: MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384 +106: +106: STDERR: +106: Not an error +196/578 Test #106: drr-c-stats ........................... Passed 0.12 sec +test 122 + Start 122: landmark-warp-b-stats-2 + +122: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +122: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +122: Test timeout computed to be: 1500 97: RETVAL: 0 97: STDOUT: Fixed = /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 97: Moving = /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -14839,57 +14733,57 @@ 97: kerx: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 97: kery: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 97: kerz: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 -97: MSE [ 0] 18945.6 (1.000) [ 0.015 secs] -97: MSE [ 1] 18945.6 (1.000) [ 0.008 secs] -97: MSE [ 2] 18980.9 (0.995) [ 0.011 secs] +97: MSE [ 0] 18945.6 (1.000) [ 0.003 secs] +97: MSE [ 1] 18945.6 (1.000) [ 0.002 secs] +97: MSE [ 2] 18980.9 (0.995) [ 0.002 secs] 97: MSE [ 3] 18885.4 (0.970) [ 0.002 secs] -97: MSE [ 4] 18084.9 (0.966) [ 0.006 secs] -97: MSE [ 5] 17034.7 (0.966) [ 0.007 secs] -97: MSE [ 6] 15346.9 (0.946) [ 0.009 secs] +97: MSE [ 4] 18084.9 (0.966) [ 0.002 secs] +97: MSE [ 5] 17034.7 (0.966) [ 0.002 secs] +97: MSE [ 6] 15346.9 (0.946) [ 0.002 secs] 97: MSE [ 7] 14427.2 (0.940) [ 0.002 secs] 97: MSE [ 8] 13561.7 (0.935) [ 0.002 secs] -97: MSE [ 9] 12732.2 (0.928) [ 0.008 secs] -97: MSE [ 10] 12276.6 (0.923) [ 0.003 secs] +97: MSE [ 9] 12732.2 (0.928) [ 0.002 secs] +97: MSE [ 10] 12276.6 (0.923) [ 0.002 secs] 97: MSE [ 11] 11827.4 (0.920) [ 0.002 secs] -97: MSE [ 12] 11399.6 (0.920) [ 0.006 secs] +97: MSE [ 12] 11399.6 (0.920) [ 0.002 secs] 97: MSE [ 13] 11078.4 (0.919) [ 0.002 secs] -97: MSE [ 14] 10787.4 (0.918) [ 0.011 secs] -97: MSE [ 15] 10317.6 (0.915) [ 0.011 secs] -97: MSE [ 16] 9735.2 (0.913) [ 0.003 secs] -97: MSE [ 17] 9362.8 (0.911) [ 0.010 secs] -97: MSE [ 18] 8947.5 (0.909) [ 0.010 secs] -97: MSE [ 19] 8534.4 (0.899) [ 0.003 secs] -97: MSE [ 20] 7953.5 (0.895) [ 0.011 secs] -97: MSE [ 21] 7656.6 (0.893) [ 0.010 secs] -97: MSE [ 22] 7364.0 (0.892) [ 0.003 secs] -97: MSE [ 23] 7174.2 (0.892) [ 0.010 secs] -97: MSE [ 24] 6956.3 (0.891) [ 0.012 secs] -97: MSE [ 25] 6512.1 (0.890) [ 0.003 secs] -97: MSE [ 26] 6079.0 (0.890) [ 0.011 secs] -97: MSE [ 27] 5716.1 (0.889) [ 0.011 secs] -97: MSE [ 28] 5454.8 (0.889) [ 0.003 secs] -97: MSE [ 29] 5201.5 (0.889) [ 0.007 secs] -97: MSE [ 30] 5013.3 (0.888) [ 0.011 secs] -97: MSE [ 31] 4840.3 (0.888) [ 0.003 secs] -97: MSE [ 32] 4652.0 (0.887) [ 0.011 secs] -97: MSE [ 33] 4400.6 (0.886) [ 0.011 secs] -97: MSE [ 34] 4085.1 (0.883) [ 0.003 secs] -97: MSE [ 35] 3778.0 (0.882) [ 0.011 secs] -97: MSE [ 36] 3521.6 (0.882) [ 0.011 secs] -97: MSE [ 37] 3308.2 (0.882) [ 0.003 secs] -97: MSE [ 38] 3126.2 (0.881) [ 0.011 secs] -97: MSE [ 39] 2988.9 (0.881) [ 0.011 secs] +97: MSE [ 14] 10787.4 (0.918) [ 0.002 secs] +97: MSE [ 15] 10317.6 (0.915) [ 0.002 secs] +97: MSE [ 16] 9735.2 (0.913) [ 0.002 secs] +97: MSE [ 17] 9362.8 (0.911) [ 0.002 secs] +97: MSE [ 18] 8947.5 (0.909) [ 0.002 secs] +97: MSE [ 19] 8534.4 (0.899) [ 0.002 secs] +97: MSE [ 20] 7953.5 (0.895) [ 0.002 secs] +97: MSE [ 21] 7656.6 (0.893) [ 0.002 secs] +97: MSE [ 22] 7364.0 (0.892) [ 0.002 secs] +97: MSE [ 23] 7174.2 (0.892) [ 0.002 secs] +97: MSE [ 24] 6956.3 (0.891) [ 0.002 secs] +97: MSE [ 25] 6512.1 (0.890) [ 0.002 secs] +97: MSE [ 26] 6079.0 (0.890) [ 0.002 secs] +97: MSE [ 27] 5716.1 (0.889) [ 0.002 secs] +97: MSE [ 28] 5454.8 (0.889) [ 0.002 secs] +97: MSE [ 29] 5201.5 (0.889) [ 0.002 secs] +97: MSE [ 30] 5013.3 (0.888) [ 0.002 secs] +97: MSE [ 31] 4840.3 (0.888) [ 0.002 secs] +97: MSE [ 32] 4652.0 (0.887) [ 0.002 secs] +97: MSE [ 33] 4400.6 (0.886) [ 0.002 secs] +97: MSE [ 34] 4085.1 (0.883) [ 0.002 secs] +97: MSE [ 35] 3778.0 (0.882) [ 0.002 secs] +97: MSE [ 36] 3521.6 (0.882) [ 0.002 secs] +97: MSE [ 37] 3308.2 (0.882) [ 0.002 secs] +97: MSE [ 38] 3126.2 (0.881) [ 0.002 secs] +97: MSE [ 39] 2988.9 (0.881) [ 0.002 secs] 97: MSE [ 40] 2836.4 (0.880) [ 0.002 secs] -97: MSE [ 41] 2736.6 (0.881) [ 0.011 secs] -97: MSE [ 42] 2623.3 (0.880) [ 0.010 secs] -97: MSE [ 43] 2426.1 (0.880) [ 0.003 secs] -97: MSE [ 44] 2271.4 (0.879) [ 0.003 secs] -97: MSE [ 45] 2112.0 (0.880) [ 0.015 secs] +97: MSE [ 41] 2736.6 (0.881) [ 0.002 secs] +97: MSE [ 42] 2623.3 (0.880) [ 0.002 secs] +97: MSE [ 43] 2426.1 (0.880) [ 0.002 secs] +97: MSE [ 44] 2271.4 (0.879) [ 0.002 secs] +97: MSE [ 45] 2112.0 (0.880) [ 0.002 secs] 97: MSE [ 46] 1926.2 (0.879) [ 0.002 secs] -97: MSE [ 47] 1775.3 (0.880) [ 0.005 secs] -97: MSE [ 48] 1621.0 (0.878) [ 0.003 secs] -97: MSE [ 49] 1504.3 (0.878) [ 0.011 secs] -97: Time for 50 iterations = 0.374833 (0.007497 sec / it) +97: MSE [ 47] 1775.3 (0.880) [ 0.002 secs] +97: MSE [ 48] 1621.0 (0.878) [ 0.002 secs] +97: MSE [ 49] 1504.3 (0.878) [ 0.002 secs] +97: Time for 50 iterations = 0.103789 (0.002076 sec / it) 97: Min: 1.248 -5.701 -5.701 97: Mean: 3.443 0.016 0.016 97: Max: 7.379 5.617 5.617 @@ -14906,32 +14800,168 @@ 97: 97: STDERR: 97: Not an error +197/578 Test #97: demons-a .............................. Passed 0.21 sec +test 125 + Start 125: landmark-warp-c-stats-1 + +125: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +125: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +125: Test timeout computed to be: 1500 +122: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +122: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha +122: EXPECTED_ERRNO is +115: RETVAL: 0 +115: STDOUT: MIN -1000.000000 AVE -991.799744 MAX 0.000000 NONZERO 54494 NUMVOX 54872 +115: +115: STDERR: +115: Not an error +198/578 Test #115: landmark-warp-a-stats-1 ............... Passed 0.14 sec +test 127 + Start 127: landmark-warp-c-stats-2 + +127: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +127: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +127: Test timeout computed to be: 1500 +125: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +125: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha +125: EXPECTED_ERRNO is +127: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +127: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha +127: EXPECTED_ERRNO is +112: RETVAL: 0 +112: STDOUT: MIN -1000.000000 AVE -999.848633 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 +112: +112: STDERR: +109: RETVAL: 0 +109: STDOUT: MIN -1000.000000 AVE -999.859619 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 +109: +109: STDERR: +112: Not an error +109: Not an error +199/578 Test #109: fdk-cpu-a-stats ....................... Passed 0.17 sec +test 131 + Start 131: plm-add-a-stats + +131: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +131: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +131: Test timeout computed to be: 1500 +200/578 Test #112: fdk-cpu-d-stats ....................... Passed 0.17 sec +test 134 + Start 134: plm-add-b-stats + +134: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +134: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +134: Test timeout computed to be: 1500 +120: RETVAL: 0 +120: STDOUT: MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872 +120: +120: STDERR: +120: Not an error +201/578 Test #120: landmark-warp-b-stats-1 ............... Passed 0.12 sec +test 137 + Start 137: plm-add-vf-a-stats + +137: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +137: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +137: Test timeout computed to be: 1500 +131: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +131: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd +131: EXPECTED_ERRNO is +134: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +134: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd +134: EXPECTED_ERRNO is +117: RETVAL: 0 +117: STDOUT: Min: -62.465 -4.112 -0.000 +117: Mean: -22.960 0.011 0.000 +117: Max: 16.278 4.199 0.000 +117: Mean abs: 25.589 1.505 0.000 +117: Ave len: 25.766 +117: Jacobian: MINJAC 1.12686 MAXJAC 1.15895 +117: Energy: MINDIL 0.128 MAXDIL 0.157995 +117: MAXSTRAIN 0.171 TOTSTRAIN 7133.92 +117: Second derivatives: MINSECDER 2.92e-10 MAXSECDER 0.000557 +117: AVESECDER 7.93e-07 INTSECDER 99.2 +117: Max second derivative at: (24 15 22) +117: +117: STDERR: +117: Not an error +202/578 Test #117: landmark-warp-a-stats-2 ............... Passed 0.13 sec +test 140 + Start 140: plm-add-vf-b-stats + +140: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +140: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +140: Test timeout computed to be: 1500 +137: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +137: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd +137: EXPECTED_ERRNO is +140: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +140: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd +140: EXPECTED_ERRNO is +122: RETVAL: 0 +122: STDOUT: Min: -30.672 -0.800 -0.000 +122: Mean: -1.500 0.018 0.000 +122: Max: 0.000 1.506 0.000 +122: Mean abs: 1.500 0.042 0.000 +122: Ave len: 1.502 +122: Jacobian: MINJAC 0.647844 MAXJAC 1.23013 +122: Energy: MINDIL -0.353 MAXDIL 0.231386 +122: MAXSTRAIN 0.259 TOTSTRAIN 179.715 +122: Second derivatives: MINSECDER 0 MAXSECDER 0.0443 +122: AVESECDER 0.000472 INTSECDER 5.89e+04 +122: Max second derivative at: (17 23 15) +122: +122: STDERR: +122: Not an error +203/578 Test #122: landmark-warp-b-stats-2 ............... Passed 0.14 sec +test 143 + Start 143: plm-adjust-a-stats + +143: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +143: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +143: Test timeout computed to be: 1500 +125: RETVAL: 0 +125: STDOUT: MIN -1000.000122 AVE -991.665894 MAX 0.000000 NONZERO 54484 NUMVOX 54872 +125: +125: STDERR: +125: Not an error +204/578 Test #125: landmark-warp-c-stats-1 ............... Passed 0.13 sec +test 146 + Start 146: plm-adjust-b-stats + +146: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +146: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +146: Test timeout computed to be: 1500 143: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 143: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd 143: EXPECTED_ERRNO is -203/578 Test #433: plm-reg-trans-mi-a .................... Passed 2.82 sec -204/578 Test #97: demons-a .............................. Passed 0.63 sec -test 155 - Start 155: plm-adjust-e-stats - -155: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -155: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -155: Test timeout computed to be: 1500 -test 158 - Start 158: plm-adjust-f-stats - -158: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -158: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -158: Test timeout computed to be: 1500 146: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 146: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd 146: EXPECTED_ERRNO is -152: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -152: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd -152: EXPECTED_ERRNO is -149: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -149: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd -149: EXPECTED_ERRNO is +134: RETVAL: 0 +134: STDOUT: MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872 +134: +134: STDERR: +134: Not an error +131: RETVAL: 0 +131: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 +131: +131: STDERR: +205/578 Test #134: plm-add-b-stats ....................... Passed 0.11 sec +test 149 + Start 149: plm-adjust-c-stats + +149: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +149: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +149: Test timeout computed to be: 1500 +131: Not an error +206/578 Test #131: plm-add-a-stats ....................... Passed 0.12 sec +test 152 + Start 152: plm-adjust-d-stats + +152: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +152: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +152: Test timeout computed to be: 1500 127: RETVAL: 0 127: STDOUT: Min: -27.760 -0.518 -0.000 127: Mean: -1.562 0.019 0.000 @@ -14947,265 +14977,537 @@ 127: 127: STDERR: 127: Not an error -205/578 Test #127: landmark-warp-c-stats-2 ............... Passed 0.27 sec -test 161 - Start 161: plm-adjust-g-stats +207/578 Test #127: landmark-warp-c-stats-2 ............... Passed 0.15 sec +test 155 + Start 155: plm-adjust-e-stats -161: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -161: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -161: Test timeout computed to be: 1500 +155: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +155: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +155: Test timeout computed to be: 1500 +137: RETVAL: 0 +137: STDOUT: Min: 20.000 0.000 0.000 +137: Mean: 20.000 0.000 0.000 +137: Max: 20.000 0.000 0.000 +137: Mean abs: 20.000 0.000 0.000 +137: Ave len: 20.000 +137: Jacobian: MINJAC 1 MAXJAC 1 +137: Energy: MINDIL 0 MAXDIL 0 +137: MAXSTRAIN 0 TOTSTRAIN 0 +137: Second derivatives: MINSECDER 0 MAXSECDER 0 +137: AVESECDER 0 INTSECDER 0 +137: Max second derivative at: (1 1 1) +137: +137: STDERR: +137: Not an error +149: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +149: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd +149: EXPECTED_ERRNO is +208/578 Test #137: plm-add-vf-a-stats .................... Passed 0.12 sec +test 158 + Start 158: plm-adjust-f-stats + +158: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +158: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +158: Test timeout computed to be: 1500 +152: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +152: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd +152: EXPECTED_ERRNO is 155: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 155: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd 155: EXPECTED_ERRNO is 158: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 158: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd 158: EXPECTED_ERRNO is +140: RETVAL: 0 +140: STDOUT: Min: 5.000 5.000 0.000 +140: Mean: 5.000 5.000 0.000 +140: Max: 5.000 5.000 0.000 +140: Mean abs: 5.000 5.000 0.000 +140: Ave len: 7.071 +140: Jacobian: MINJAC 1 MAXJAC 1 +140: Energy: MINDIL 0 MAXDIL 0 +140: MAXSTRAIN 0 TOTSTRAIN 0 +140: Second derivatives: MINSECDER 0 MAXSECDER 0 +140: AVESECDER 0 INTSECDER 0 +140: Max second derivative at: (1 1 1) +140: +140: STDERR: +140: Not an error +209/578 Test #140: plm-add-vf-b-stats .................... Passed 0.14 sec +test 161 + Start 161: plm-adjust-g-stats + +161: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +161: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +161: Test timeout computed to be: 1500 161: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 161: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd 161: EXPECTED_ERRNO is -131: RETVAL: 0 -131: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 -131: -131: STDERR: -131: Not an error -206/578 Test #131: plm-add-a-stats ....................... Passed 0.25 sec +143: RETVAL: 0 +143: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 +143: +143: STDERR: +143: Not an error +210/578 Test #143: plm-adjust-a-stats .................... Passed 0.12 sec test 164 Start 164: plm-adjust-h-stats 164: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 164: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 164: Test timeout computed to be: 1500 -164: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -164: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd -164: EXPECTED_ERRNO is -134: RETVAL: 0 -134: STDOUT: MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872 -134: -134: STDERR: -134: Not an error -207/578 Test #134: plm-add-b-stats ....................... Passed 0.28 sec +146: RETVAL: 0 +146: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 +146: +146: STDERR: +146: Not an error +211/578 Test #146: plm-adjust-b-stats .................... Passed 0.12 sec test 167 Start 167: plm-adjust-i-stats 167: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 167: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 167: Test timeout computed to be: 1500 -149: RETVAL: 0 -149: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 -149: -149: STDERR: -149: Not an error -143: RETVAL: 0 -143: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 -143: -143: STDERR: -143: Not an error -208/578 Test #149: plm-adjust-c-stats .................... Passed 0.23 sec +167: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +167: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd +167: EXPECTED_ERRNO is +152: RETVAL: 0 +152: STDOUT: MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872 +152: +152: STDERR: +164: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +164: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd +164: EXPECTED_ERRNO is +152: Not an error +559: RETVAL: 0 +559: STDOUT: +559: [PLAN] +559: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha +559: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha +559: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha +559: debug : 0 +559: dose norm : 100 +559: +559: [SETTINGS] +559: flavor: a ** +559: homo_approx: n ** +559: ray_step: 1 ** +559: aperture_out: ** +559: proj_dose_out: ** +559: proj_img_out: ** +559: range_comp_out: ** +559: sigma_out: ** +559: wed_out: ** +559: beam_weight: 1 ** +559: +559: [GEOMETRY & APERTURE] +559: source: 0 -2000 0 ** +559: isocenter: 0 0 0 ** +559: vup: 0 0 1 ** +559: offset: 1500 ** +559: ap_center in pixels: 20 20 ** +559: i_res: 41 41 ** +559: spacing: 3.75 3.75 ** +559: source_size: 0 ** +212/578 Test #152: plm-adjust-d-stats .................... Passed 0.12 sec test 170 Start 170: plm-adjust-j-stats 170: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-j-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 170: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 170: Test timeout computed to be: 1500 -209/578 Test #143: plm-adjust-a-stats .................... Passed 0.26 sec +559: ap_file_in: ** +559: rc_file_in: ** +559: smearing: 5 ** +559: +559: [PEAK] +559: E0: P0 +559: spread: P0 +559: weight: P0 +559: +559: Start dose calculation Beam 1 +559: Plan_calc::compute_beam_dose(beam) entry -- +559: Setting RVRTS = 1 +559: FPD = 347.500001, BPD = 649.116731 +559: 41 41 302 +559: Setting RVRTS = 1 +559: FPD = 347.500001, BPD = 649.116731 +559: 41 41 302 +559: Setting RVRTS = 1 +559: FPD = 347.500001, BPD = 649.116731 +559: 41 41 302 +559: Priority 5. Target detected. +559: Computing beam modifiers for passive target +559: Compute target wepl_min_max... +559: Apply lateral smearing to the target... +559: Smearing = 5.000000, Smearing_ap = 3.750000 +559: Strel size = (1,1), (3,3) +559: 0 1 0 +559: 1 1 1 +559: 0 1 0 +559: Apply proximal and distal ... +559: Compute max wed... +559: Compute the aperture... +559: Compute range compensator... +559: Max wed in the target is 117.554 mm. +559: Min wed in the target is 88.5526 mm. +559: ires = 41 41 +559: proj_vol dim = 41 41 302 +559: prescription min/max: 88.5526 mm, 117.554 mm. +559: +559: 22 Mono-energetic BP used: +559: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 +559: Adding peak to sobp (130.000000, 1.000000, 0.895612) [0.010000, 140.000000] +559: Adding peak to sobp (129.000000, 1.000000, 0.143334) [0.010000, 140.000000] +559: Adding peak to sobp (128.000000, 1.000000, 0.216499) [0.010000, 140.000000] +559: Adding peak to sobp (127.000000, 1.000000, 0.160917) [0.010000, 140.000000] +559: Adding peak to sobp (126.000000, 1.000000, 0.140926) [0.010000, 140.000000] +559: Adding peak to sobp (125.000000, 1.000000, 0.124814) [0.010000, 140.000000] +559: Adding peak to sobp (124.000000, 1.000000, 0.113261) [0.010000, 140.000000] +559: Adding peak to sobp (123.000000, 1.000000, 0.102876) [0.010000, 140.000000] +559: Adding peak to sobp (122.000000, 1.000000, 0.096644) [0.010000, 140.000000] +559: Adding peak to sobp (121.000000, 1.000000, 0.089393) [0.010000, 140.000000] +559: Adding peak to sobp (120.000000, 1.000000, 0.083935) [0.010000, 140.000000] +559: Adding peak to sobp (119.000000, 1.000000, 0.078956) [0.010000, 140.000000] +559: Adding peak to sobp (118.000000, 1.000000, 0.074957) [0.010000, 140.000000] +559: Adding peak to sobp (117.000000, 1.000000, 0.071067) [0.010000, 140.000000] +559: Adding peak to sobp (116.000000, 1.000000, 0.067803) [0.010000, 140.000000] +559: Adding peak to sobp (115.000000, 1.000000, 0.064859) [0.010000, 140.000000] +559: Adding peak to sobp (114.000000, 1.000000, 0.062045) [0.010000, 140.000000] +559: Adding peak to sobp (113.000000, 1.000000, 0.059730) [0.010000, 140.000000] +559: Adding peak to sobp (112.000000, 1.000000, 0.057228) [0.010000, 140.000000] +559: Adding peak to sobp (111.000000, 1.000000, 0.056709) [0.010000, 140.000000] +559: Adding peak to sobp (110.000000, 1.000000, 0.045556) [0.010000, 140.000000] +559: Adding peak to sobp (109.000000, 1.000000, 0.079095) [0.010000, 140.000000] +559: **** (1) +559: Raw dose at the maximum (15, 15, 10) : 1.016 A.U. +559: Dose normalized at the maximum to 1 x 100%. +559: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm +559: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha +559: Sigma: 0.000000 seconds +559: Calc: 0.893732 seconds +559: IO: 0.023736 seconds +559: Reformat: 0.000000 seconds +559: Misc: 0.009483 seconds +559: done. +559: +559: Total execution time : 0.942719 seconds. +559: +559: STDERR: +559: Not an error +213/578 Test #559: proton-dose-4a ........................ Passed 1.08 sec test 173 Start 173: plm-boundary-a-stats 173: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 173: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 173: Test timeout computed to be: 1500 -167: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -167: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd -167: EXPECTED_ERRNO is -146: RETVAL: 0 -146: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 -146: -146: STDERR: -146: Not an error -210/578 Test #146: plm-adjust-b-stats .................... Passed 0.27 sec -170: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -170: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd -170: EXPECTED_ERRNO is -173: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -173: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd -173: EXPECTED_ERRNO is +155: RETVAL: 0 +155: STDOUT: MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872 +155: +155: STDERR: +155: Not an error +149: RETVAL: 0 +149: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 +149: +149: STDERR: +149: Not an error +214/578 Test #155: plm-adjust-e-stats .................... Passed 0.13 sec test 176 Start 176: plm-boundary-b-stats 176: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 176: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 176: Test timeout computed to be: 1500 -161: RETVAL: 0 -161: STDOUT: MIN -0.025301 AVE -0.000000 MAX 0.287606 NONZERO 54872 NUMVOX 54872 -161: -161: STDERR: -161: Not an error -211/578 Test #161: plm-adjust-g-stats .................... Passed 0.22 sec +215/578 Test #149: plm-adjust-c-stats .................... Passed 0.14 sec +170: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +170: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd +170: EXPECTED_ERRNO is test 179 Start 179: plm-boundary-c-stats 179: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 179: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 179: Test timeout computed to be: 1500 -137: RETVAL: 0 -137: STDOUT: Min: 20.000 0.000 0.000 -137: Mean: 20.000 0.000 0.000 -137: Max: 20.000 0.000 0.000 -137: Mean abs: 20.000 0.000 0.000 -137: Ave len: 20.000 -137: Jacobian: MINJAC 1 MAXJAC 1 -137: Energy: MINDIL 0 MAXDIL 0 -137: MAXSTRAIN 0 TOTSTRAIN 0 -137: Second derivatives: MINSECDER 0 MAXSECDER 0 -137: AVESECDER 0 INTSECDER 0 -137: Max second derivative at: (1 1 1) -137: -137: STDERR: -137: Not an error -155: RETVAL: 0 -155: STDOUT: MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872 -155: -155: STDERR: -155: Not an error -176: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -176: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd -176: EXPECTED_ERRNO is -212/578 Test #137: plm-add-vf-a-stats .................... Passed 0.33 sec +158: RETVAL: 0 +158: STDOUT: MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872 +158: +158: STDERR: +158: Not an error +173: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +173: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd +173: EXPECTED_ERRNO is +216/578 Test #158: plm-adjust-f-stats .................... Passed 0.13 sec test 182 Start 182: plm-boundary-d-stats 182: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 182: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 182: Test timeout computed to be: 1500 -213/578 Test #155: plm-adjust-e-stats .................... Passed 0.28 sec -test 185 - Start 185: plm-boundary-e-stats - -185: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -185: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -185: Test timeout computed to be: 1500 +176: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +176: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd +176: EXPECTED_ERRNO is 179: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 179: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd 179: EXPECTED_ERRNO is +161: RETVAL: 0 +161: STDOUT: MIN -0.025301 AVE -0.000000 MAX 0.287606 NONZERO 54872 NUMVOX 54872 +161: +161: STDERR: +161: Not an error 182: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 182: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd 182: EXPECTED_ERRNO is -158: RETVAL: 0 -158: STDOUT: MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872 -158: -158: STDERR: -158: Not an error -152: RETVAL: 0 -152: STDOUT: MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872 -152: -152: STDERR: -152: Not an error -214/578 Test #158: plm-adjust-f-stats .................... Passed 0.29 sec +217/578 Test #161: plm-adjust-g-stats .................... Passed 0.12 sec +test 185 + Start 185: plm-boundary-e-stats + +185: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +185: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +185: Test timeout computed to be: 1500 +185: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +185: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd +185: EXPECTED_ERRNO is +565: RETVAL: 0 +565: STDOUT: +565: [PLAN] +565: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha +565: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha +565: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha +565: debug : 0 +565: dose norm : 100 +565: +565: [SETTINGS] +565: flavor: a ** +565: homo_approx: n ** +565: ray_step: 1 ** +565: aperture_out: ** +565: proj_dose_out: ** +565: proj_img_out: ** +565: range_comp_out: ** +565: sigma_out: ** +565: wed_out: ** +565: beam_weight: 1 ** +565: +565: [GEOMETRY & APERTURE] +565: source: 0 -2000 0 ** +565: isocenter: 0 0 0 ** +565: vup: 0 0 1 ** +565: offset: 1500 ** +565: ap_center in pixels: 20 20 ** +565: i_res: 41 41 ** +565: spacing: 3.75 3.75 ** +565: source_size: 0 ** +565: ap_file_in: ** +565: rc_file_in: ** +565: smearing: 5 ** +565: +565: [PEAK] +565: E0: P0 +565: spread: P0 +565: weight: P0 +565: +565: Start dose calculation Beam 1 +565: Plan_calc::compute_beam_dose(beam) entry -- +565: Setting RVRTS = 1 +565: FPD = 347.500001, BPD = 649.116731 +565: 41 41 302 +565: Setting RVRTS = 1 +565: FPD = 347.500001, BPD = 649.116731 +565: 41 41 302 +565: Setting RVRTS = 1 +565: FPD = 347.500001, BPD = 649.116731 +565: 41 41 302 +565: Priority 5. Target detected. +565: Compute target wepl_min_max... +565: Apply lateral smearing to the target... +565: Smearing = 5.000000, Smearing_ap = 3.750000 +565: Strel size = (1,1), (3,3) +565: 0 1 0 +565: 1 1 1 +565: 0 1 0 +565: Apply proximal and distal ... +565: Compute max wed... +565: Compute the aperture... +565: Max wed in the target is 117.554 mm. +565: Min wed in the target is 88.5523 mm. +565: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. +565: Min and max energies for treating the PTV: 109 MeV and 130 MeV. +565: +565: 22 Mono-energetic BP used: +565: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 +565: Optimization of the particle number map for any mono-energetic slice in progress... +565: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] +565: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. +565: Dose normalized at the maximum to 1 x 100%. +565: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm +565: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha +565: Sigma: 0.000000 seconds +565: Calc: 0.958329 seconds +565: IO: 0.027446 seconds +565: Reformat: 0.000000 seconds +565: Misc: 0.019090 seconds +565: done. +565: +565: Total execution time : 1.020474 seconds. +565: +565: STDERR: +565: Not an error +218/578 Test #565: proton-dose-5a ........................ Passed 1.14 sec test 188 Start 188: plm-convert-dicom-a-stats 188: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 188: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 188: Test timeout computed to be: 1500 -215/578 Test #152: plm-adjust-d-stats .................... Passed 0.32 sec +188: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +188: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha +188: EXPECTED_ERRNO is +164: RETVAL: 0 +164: STDOUT: MIN -0.283680 AVE -0.248078 MAX 0.156631 NONZERO 54872 NUMVOX 54872 +164: +164: STDERR: +164: Not an error +219/578 Test #164: plm-adjust-h-stats .................... Passed 0.12 sec test 191 Start 191: plm-convert-dicom-b-stats 191: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/dicom_info" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 191: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 191: Test timeout computed to be: 1500 -140: RETVAL: 0 -140: STDOUT: Min: 5.000 5.000 0.000 -140: Mean: 5.000 5.000 0.000 -140: Max: 5.000 5.000 0.000 -140: Mean abs: 5.000 5.000 0.000 -140: Ave len: 7.071 -140: Jacobian: MINJAC 1 MAXJAC 1 -140: Energy: MINDIL 0 MAXDIL 0 -140: MAXSTRAIN 0 TOTSTRAIN 0 -140: Second derivatives: MINSECDER 0 MAXSECDER 0 -140: AVESECDER 0 INTSECDER 0 -140: Max second derivative at: (1 1 1) -140: -140: STDERR: -140: Not an error -216/578 Test #140: plm-add-vf-b-stats .................... Passed 0.35 sec +191: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/dicom_info +191: PARMS is --input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm +191: EXPECTED_ERRNO is +167: RETVAL: 0 +167: STDOUT: MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872 +167: +167: STDERR: +167: Not an error +220/578 Test #167: plm-adjust-i-stats .................... Passed 0.14 sec test 194 Start 194: plm-convert-dicom-c-stats 194: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 194: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 194: Test timeout computed to be: 1500 -185: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -185: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd -185: EXPECTED_ERRNO is -191: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/dicom_info -191: PARMS is --input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm -191: EXPECTED_ERRNO is -188: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -188: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha -188: EXPECTED_ERRNO is -194: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -194: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha -194: EXPECTED_ERRNO is -164: RETVAL: 0 -164: STDOUT: MIN -0.283680 AVE -0.248078 MAX 0.156631 NONZERO 54872 NUMVOX 54872 -164: -164: STDERR: -164: Not an error -217/578 Test #164: plm-adjust-h-stats .................... Passed 0.26 sec +170: RETVAL: 0 +170: STDOUT: MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872 +170: +170: STDERR: +170: Not an error +221/578 Test #170: plm-adjust-j-stats .................... Passed 0.12 sec test 200 Start 200: plm-convert-dicom-donut-a-stats 200: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 200: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 200: Test timeout computed to be: 1500 -200: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -200: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd -200: EXPECTED_ERRNO is -167: RETVAL: 0 -167: STDOUT: MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872 -167: -167: STDERR: -167: Not an error -218/578 Test #167: plm-adjust-i-stats .................... Passed 0.25 sec +173: RETVAL: 0 +173: STDOUT: MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000 +173: +173: STDERR: +173: Not an error +222/578 Test #173: plm-boundary-a-stats .................. Passed 0.12 sec test 203 Start 203: plm-convert-dicom-donut-b-stats 203: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 203: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 203: Test timeout computed to be: 1500 +194: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +194: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha +194: EXPECTED_ERRNO is 176: RETVAL: 0 176: STDOUT: MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000 176: 176: STDERR: +182: RETVAL: 0 +182: STDOUT: MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000 +182: +182: STDERR: 176: Not an error -219/578 Test #176: plm-boundary-b-stats .................. Passed 0.25 sec +182: Not an error +179: RETVAL: 0 +179: STDOUT: MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000 +179: +179: STDERR: +179: Not an error +200: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +200: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd +200: EXPECTED_ERRNO is +223/578 Test #176: plm-boundary-b-stats .................. Passed 0.12 sec test 207 Start 207: plm-convert-cxt-stats 207: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-cxt-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 207: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 207: Test timeout computed to be: 1500 +224/578 Test #179: plm-boundary-c-stats .................. Passed 0.12 sec +225/578 Test #182: plm-boundary-d-stats .................. Passed 0.12 sec +test 209 + Start 209: plm-convert-prefix-fcsv + +209: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-prefix-fcsv" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +209: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +209: Test timeout computed to be: 1500 +test 211 + Start 211: plm-convert-dose-scale-stats + +211: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dose-scale-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +211: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +211: Test timeout computed to be: 1500 203: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 203: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd 203: EXPECTED_ERRNO is -173: RETVAL: 0 -173: STDOUT: MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000 -173: -173: STDERR: -173: Not an error +207: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +207: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha +207: EXPECTED_ERRNO is +185: RETVAL: 0 +185: STDOUT: MIN 0.000000 AVE 2.142000 MAX 56.000000 NONZERO 840 NUMVOX 8000 +185: +185: STDERR: +185: Not an error +209: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +209: PARMS is convert;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5 +209: EXPECTED_ERRNO is +226/578 Test #185: plm-boundary-e-stats .................. Passed 0.12 sec +test 214 + Start 214: plm-crop-a-stats + +214: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +214: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +214: Test timeout computed to be: 1500 191: RETVAL: 0 191: STDOUT: Reading input file: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm 191: Specific Character Set = ISO_IR 100 191: Image Type = DERIVED\SECONDARY\AXIAL -191: Instance Creation Date = 20261009 -191: Instance Creation Time = 085722 +191: Instance Creation Date = 20250907 +191: Instance Creation Time = 044647 191: SOP Class UID = 1.2.840.10008.5.1.4.1.1.2 -191: SOP Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.56909.1791579444.673210 -191: Study Date = 20261009 +191: SOP Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.387349.1757170009.639321 +191: Study Date = 20250907 191: Series Date = -191: Study Time = 085722 +191: Study Time = 044647 191: Series Time = 191: Accession Number = 191: Modality = CT @@ -15217,7 +15519,7 @@ 191: Operators' Name = 191: Manufacturer's Model Name = Plastimatch 191: Patient's Name = ANONYMOUS -191: Patient ID = PL648466398389852 +191: Patient ID = PL276187073056329 191: Patient's Birth Date = 191: Patient's Sex = O 191: Slice Thickness = 13.157895 @@ -15225,15 +15527,15 @@ 191: Device Serial Number = 191: Software Version(s) = 1.10.0 191: Patient Position = FFS -191: Study Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.56909.1791579444.673190 -191: Series Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.56909.1791579444.673207 +191: Study Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.387349.1757170009.639301 +191: Series Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.387349.1757170009.639318 191: Study ID = 191: Series Number = 191: Acquisition Number = 191: Instance Number = 0 191: Image Position (Patient) = -243.421051\-243.421051\-243.421051 191: Image Orientation (Patient) = 1.000000\0.000000\0.000000\0.000000\1.000000\0.000000 -191: Frame of Reference UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.56909.1791579444.673191 +191: Frame of Reference UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.387349.1757170009.639302 191: Position Reference Indicator = SP 191: Slice Location = -243.421051 191: Samples per Pixel = 1 @@ -15253,89 +15555,138 @@ 191: 191: STDERR: 191: Not an error -220/578 Test #173: plm-boundary-a-stats .................. Passed 0.29 sec -test 209 - Start 209: plm-convert-prefix-fcsv - -209: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-prefix-fcsv" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -209: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -209: Test timeout computed to be: 1500 -182: RETVAL: 0 -182: STDOUT: MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000 -182: -182: STDERR: -182: Not an error -221/578 Test #182: plm-boundary-d-stats .................. Passed 0.25 sec -222/578 Test #191: plm-convert-dicom-b-stats ............. Passed 0.21 sec -test 211 - Start 211: plm-convert-dose-scale-stats - -211: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dose-scale-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -211: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -211: Test timeout computed to be: 1500 -test 214 - Start 214: plm-crop-a-stats - -214: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -214: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -214: Test timeout computed to be: 1500 -170: RETVAL: 0 -170: STDOUT: MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872 -170: -170: STDERR: -170: Not an error -207: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -207: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha -207: EXPECTED_ERRNO is -223/578 Test #170: plm-adjust-j-stats .................... Passed 0.32 sec +227/578 Test #191: plm-convert-dicom-b-stats ............. Passed 0.07 sec +211: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +211: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha +211: EXPECTED_ERRNO is test 217 Start 217: plm-crop-b-stats 217: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 217: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 217: Test timeout computed to be: 1500 -179: RETVAL: 0 -179: STDOUT: MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000 -179: -179: STDERR: -179: Not an error -224/578 Test #179: plm-boundary-c-stats .................. Passed 0.28 sec +571: RETVAL: 0 +571: STDOUT: +571: [PLAN] +571: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha +571: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha +571: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha +571: debug : 0 +571: dose norm : 100 +571: +571: [SETTINGS] +571: flavor: a ** +571: homo_approx: n ** +571: ray_step: 1 ** +571: aperture_out: ** +571: proj_dose_out: ** +571: proj_img_out: ** +571: range_comp_out: ** +571: sigma_out: ** +571: wed_out: ** +571: beam_weight: 1 ** +571: +571: [GEOMETRY & APERTURE] +571: source: 0 -2000 0 ** +571: isocenter: 0 0 0 ** +571: vup: 0 0 1 ** +571: offset: 1500 ** +571: ap_center in pixels: 20 20 ** +571: i_res: 41 41 ** +571: spacing: 3.75 3.75 ** +571: source_size: 0 ** +571: ap_file_in: ** +571: rc_file_in: ** +571: smearing: 5 ** +571: +571: [PEAK] +571: E0: P0 +571: spread: P0 +571: weight: P0 +571: +571: Start dose calculation Beam 1 +571: Plan_calc::compute_beam_dose(beam) entry -- +571: Setting RVRTS = 1 +571: FPD = 347.500001, BPD = 649.116731 +571: 41 41 302 +571: Setting RVRTS = 1 +571: FPD = 347.500001, BPD = 649.116731 +571: 41 41 302 +571: Setting RVRTS = 1 +571: FPD = 347.500001, BPD = 649.116731 +571: 41 41 302 +571: Priority 5. Target detected. +571: Compute target wepl_min_max... +571: Apply lateral smearing to the target... +571: Smearing = 5.000000, Smearing_ap = 3.750000 +571: Strel size = (1,1), (3,3) +571: 0 1 0 +571: 1 1 1 +571: 0 1 0 +571: Apply proximal and distal ... +571: Compute max wed... +571: Compute the aperture... +571: Max wed in the target is 117.554 mm. +571: Min wed in the target is 88.5523 mm. +571: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. +571: Min and max energies for treating the PTV: 109 MeV and 130 MeV. +571: +571: 22 Mono-energetic BP used: +571: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 +571: Optimization of the particle number map for any mono-energetic slice in progress... +571: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] +571: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. +571: Dose normalized at the maximum to 1 x 100%. +571: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm +571: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha +571: Sigma: 0.000000 seconds +571: Calc: 0.913757 seconds +571: IO: 0.046831 seconds +571: Reformat: 0.000000 seconds +571: Misc: 0.004576 seconds +571: done. +571: +571: Total execution time : 0.981899 seconds. +571: +571: STDERR: +571: Not an error +214: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +214: PARMS is header;plm-crop-a.mha +214: EXPECTED_ERRNO is +228/578 Test #571: proton-dose-6a ........................ Passed 1.13 sec test 220 Start 220: plm-crop-c-stats 220: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-c.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 220: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 220: Test timeout computed to be: 1500 -185: RETVAL: 0 -185: STDOUT: MIN 0.000000 AVE 2.142000 MAX 56.000000 NONZERO 840 NUMVOX 8000 -185: -185: STDERR: -185: Not an error -209: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -209: PARMS is convert;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5 -209: EXPECTED_ERRNO is -214: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -214: PARMS is header;plm-crop-a.mha -214: EXPECTED_ERRNO is -225/578 Test #185: plm-boundary-e-stats .................. Passed 0.27 sec -test 222 - Start 222: plm-dice-a - -222: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -222: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -222: Test timeout computed to be: 1500 -211: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -211: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha -211: EXPECTED_ERRNO is -217: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -217: PARMS is header;plm-crop-b.mha -217: EXPECTED_ERRNO is 220: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 220: PARMS is header;plm-crop-c.mha 220: EXPECTED_ERRNO is -222: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -222: PARMS is dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha -222: EXPECTED_ERRNO is +217: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +217: PARMS is header;plm-crop-b.mha +217: EXPECTED_ERRNO is 188: RETVAL: 0 188: STDOUT: SS_IMAGE: At most 16 structures 188: S 0 NVOX 1648003 @@ -15357,7 +15708,19 @@ 188: 188: STDERR: 188: Not an error -226/578 Test #188: plm-convert-dicom-a-stats ............. Passed 0.33 sec +229/578 Test #188: plm-convert-dicom-a-stats ............. Passed 0.15 sec +test 222 + Start 222: plm-dice-a + +222: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +222: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +222: Test timeout computed to be: 1500 +194: RETVAL: 0 +194: STDOUT: MIN 0.000000 AVE 0.000280 MAX 1.000000 NONZERO 280 NUMVOX 1000000 +194: +194: STDERR: +194: Not an error +230/578 Test #194: plm-convert-dicom-c-stats ............. Passed 0.12 sec test 224 Start 224: plm-dice-b @@ -15385,190 +15748,16 @@ 200: 200: STDERR: 200: Not an error -224: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -224: PARMS is dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha -224: EXPECTED_ERRNO is -227/578 Test #200: plm-convert-dicom-donut-a-stats ....... Passed 0.26 sec +231/578 Test #200: plm-convert-dicom-donut-a-stats ....... Passed 0.12 sec +222: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +222: PARMS is dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha +222: EXPECTED_ERRNO is test 226 Start 226: plm-dice-c 226: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 226: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 226: Test timeout computed to be: 1500 -194: RETVAL: 0 -194: STDOUT: MIN 0.000000 AVE 0.000280 MAX 1.000000 NONZERO 280 NUMVOX 1000000 -194: -194: STDERR: -194: Not an error -228/578 Test #194: plm-convert-dicom-c-stats ............. Passed 0.37 sec -test 232 - Start 232: plm-dice-d - -232: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -232: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -232: Test timeout computed to be: 1500 -226: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -226: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha -226: EXPECTED_ERRNO is -232: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -232: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha -232: EXPECTED_ERRNO is -559: RETVAL: 0 -559: STDOUT: -559: [PLAN] -559: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha -559: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha -559: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha -559: debug : 0 -559: dose norm : 100 -559: -559: [SETTINGS] -559: flavor: a ** -559: homo_approx: n ** -559: ray_step: 1 ** -559: aperture_out: ** -559: proj_dose_out: ** -559: proj_img_out: ** -559: range_comp_out: ** -559: sigma_out: ** -559: wed_out: ** -559: beam_weight: 1 ** -559: -559: [GEOMETRY & APERTURE] -559: source: 0 -2000 0 ** -559: isocenter: 0 0 0 ** -559: vup: 0 0 1 ** -559: offset: 1500 ** -559: ap_center in pixels: 20 20 ** -559: i_res: 41 41 ** -559: spacing: 3.75 3.75 ** -559: source_size: 0 ** -559: ap_file_in: ** -559: rc_file_in: ** -559: smearing: 5 ** -559: -559: [PEAK] -559: E0: P0 -559: spread: P0 -559: weight: P0 -559: -559: Start dose calculation Beam 1 -559: Plan_calc::compute_beam_dose(beam) entry -- -559: Setting RVRTS = 1 -559: FPD = 347.500001, BPD = 649.116731 -559: 41 41 302 -559: Setting RVRTS = 1 -559: FPD = 347.500001, BPD = 649.116731 -559: 41 41 302 -559: Setting RVRTS = 1 -559: FPD = 347.500001, BPD = 649.116731 -559: 41 41 302 -559: Priority 5. Target detected. -559: Computing beam modifiers for passive target -559: Compute target wepl_min_max... -559: Apply lateral smearing to the target... -559: Smearing = 5.000000, Smearing_ap = 3.750000 -559: Strel size = (1,1), (3,3) -559: 0 1 0 -559: 1 1 1 -559: 0 1 0 -559: Apply proximal and distal ... -559: Compute max wed... -559: Compute the aperture... -559: Compute range compensator... -559: Max wed in the target is 117.554 mm. -559: Min wed in the target is 88.5526 mm. -559: ires = 41 41 -559: proj_vol dim = 41 41 302 -559: prescription min/max: 88.5526 mm, 117.554 mm. -559: -559: 22 Mono-energetic BP used: -559: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 -559: Adding peak to sobp (130.000000, 1.000000, 0.895612) [0.010000, 140.000000] -559: Adding peak to sobp (129.000000, 1.000000, 0.143334) [0.010000, 140.000000] -559: Adding peak to sobp (128.000000, 1.000000, 0.216499) [0.010000, 140.000000] -559: Adding peak to sobp (127.000000, 1.000000, 0.160917) [0.010000, 140.000000] -559: Adding peak to sobp (126.000000, 1.000000, 0.140926) [0.010000, 140.000000] -559: Adding peak to sobp (125.000000, 1.000000, 0.124814) [0.010000, 140.000000] -559: Adding peak to sobp (124.000000, 1.000000, 0.113261) [0.010000, 140.000000] -559: Adding peak to sobp (123.000000, 1.000000, 0.102876) [0.010000, 140.000000] -559: Adding peak to sobp (122.000000, 1.000000, 0.096644) [0.010000, 140.000000] -559: Adding peak to sobp (121.000000, 1.000000, 0.089393) [0.010000, 140.000000] -559: Adding peak to sobp (120.000000, 1.000000, 0.083935) [0.010000, 140.000000] -559: Adding peak to sobp (119.000000, 1.000000, 0.078956) [0.010000, 140.000000] -559: Adding peak to sobp (118.000000, 1.000000, 0.074957) [0.010000, 140.000000] -559: Adding peak to sobp (117.000000, 1.000000, 0.071067) [0.010000, 140.000000] -559: Adding peak to sobp (116.000000, 1.000000, 0.067803) [0.010000, 140.000000] -559: Adding peak to sobp (115.000000, 1.000000, 0.064859) [0.010000, 140.000000] -559: Adding peak to sobp (114.000000, 1.000000, 0.062045) [0.010000, 140.000000] -559: Adding peak to sobp (113.000000, 1.000000, 0.059730) [0.010000, 140.000000] -559: Adding peak to sobp (112.000000, 1.000000, 0.057228) [0.010000, 140.000000] -559: Adding peak to sobp (111.000000, 1.000000, 0.056709) [0.010000, 140.000000] -559: Adding peak to sobp (110.000000, 1.000000, 0.045556) [0.010000, 140.000000] -559: Adding peak to sobp (109.000000, 1.000000, 0.079095) [0.010000, 140.000000] -559: **** (1) -559: Raw dose at the maximum (15, 15, 10) : 1.016 A.U. -559: Dose normalized at the maximum to 1 x 100%. -559: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm -559: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha -559: Sigma: 0.000000 seconds -559: Calc: 1.738121 seconds -559: IO: 0.079910 seconds -559: Reformat: 0.000000 seconds -559: Misc: 0.012101 seconds -559: done. -559: -559: Total execution time : 1.869835 seconds. -559: -559: STDERR: -559: Not an error -229/578 Test #559: proton-dose-4a ........................ Passed 2.19 sec -test 238 - Start 238: plm-dice-e - -238: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -238: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -238: Test timeout computed to be: 1500 -220: RETVAL: 0 -220: STDOUT: Type = float -220: Planes = 1 -220: Origin = -9.2105 -9.2105 -9.2105 -220: Size = 15 15 15 -220: Spacing = 1.3158 1.3158 1.3158 -220: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -220: -220: STDERR: -220: Not an error -230/578 Test #220: plm-crop-c-stats ...................... Passed 0.24 sec -test 241 - Start 241: plm-dice-f - -241: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -241: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -241: Test timeout computed to be: 1500 -238: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -238: PARMS is dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd -238: EXPECTED_ERRNO is -217: RETVAL: 0 -217: STDOUT: Type = float -217: Planes = 1 -217: Origin = -14.4737 3.9474 -11.8421 -217: Size = 19 11 4 -217: Spacing = 1.3158 1.3158 1.3158 -217: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -217: -217: STDERR: -241: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -241: PARMS is dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd -241: EXPECTED_ERRNO is -217: Not an error -231/578 Test #217: plm-crop-b-stats ...................... Passed 0.28 sec -test 245 - Start 245: plm-dmap-b - -245: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -245: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -245: Test timeout computed to be: 1500 203: RETVAL: 0 203: STDOUT: SS_IMAGE: At most 16 structures 203: S 0 NVOX 1924 @@ -15590,34 +15779,19 @@ 203: 203: STDERR: 203: Not an error -232/578 Test #203: plm-convert-dicom-donut-b-stats ....... Passed 0.36 sec -test 247 - Start 247: plm-dvh-a - -247: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -247: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -247: Test timeout computed to be: 1500 -222: RETVAL: 0 -222: STDOUT: CENTER_OF_MASS -222: ref 4.18425e-05 7.62939e-06 7.62939e-06 -222: cmp 19.7369 7.62939e-06 7.62939e-06 -222: TP: 384 -222: TN: 54296 -222: FN: 128 -222: FP: 64 -222: DICE: 0.800000 -222: SE: 0.750000 -222: SP: 0.998823 -222: -222: STDERR: -222: Not an error -233/578 Test #222: plm-dice-a ............................ Passed 0.28 sec -test 250 - Start 250: plm-dvh-b +232/578 Test #203: plm-convert-dicom-donut-b-stats ....... Passed 0.13 sec +test 232 + Start 232: plm-dice-d -250: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -250: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -250: Test timeout computed to be: 1500 +232: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +232: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +232: Test timeout computed to be: 1500 +224: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +224: PARMS is dice;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha +224: EXPECTED_ERRNO is +226: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +226: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha +226: EXPECTED_ERRNO is 207: RETVAL: 0 207: STDOUT: SS_IMAGE: At most 16 structures 207: S 0 NVOX 1648003 @@ -15639,6 +15813,25 @@ 207: 207: STDERR: 207: Not an error +233/578 Test #207: plm-convert-cxt-stats ................. Passed 0.13 sec +test 238 + Start 238: plm-dice-e + +238: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +238: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +238: Test timeout computed to be: 1500 +211: RETVAL: 0 +211: STDOUT: MIN 0.000000 AVE 0.294533 MAX 77.699997 NONZERO 208 NUMVOX 54872 +211: +211: STDERR: +211: Not an error +234/578 Test #211: plm-convert-dose-scale-stats .......... Passed 0.13 sec +test 241 + Start 241: plm-dice-f + +241: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +241: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +241: Test timeout computed to be: 1500 214: RETVAL: 0 214: STDOUT: Type = float 214: Planes = 1 @@ -15649,69 +15842,6 @@ 214: 214: STDERR: 214: Not an error -245: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -245: PARMS is dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance -245: EXPECTED_ERRNO is -234/578 Test #207: plm-convert-cxt-stats ................. Passed 0.34 sec -test 253 - Start 253: plm-dvh-c - -253: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -253: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -253: Test timeout computed to be: 1500 -235/578 Test #214: plm-crop-a-stats ...................... Passed 0.33 sec -test 257 - Start 257: plm-fill-a-stats - -257: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -257: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -257: Test timeout computed to be: 1500 -211: RETVAL: 0 -211: STDOUT: MIN 0.000000 AVE 0.294533 MAX 77.699997 NONZERO 208 NUMVOX 54872 -211: -211: STDERR: -211: Not an error -247: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -247: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv -247: EXPECTED_ERRNO is -250: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -250: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv -250: EXPECTED_ERRNO is -236/578 Test #211: plm-convert-dose-scale-stats .......... Passed 0.35 sec -test 260 - Start 260: plm-mask-a-stats - -260: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -260: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -260: Test timeout computed to be: 1500 -253: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -253: PARMS is dvh;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv -253: EXPECTED_ERRNO is -257: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -257: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha -257: EXPECTED_ERRNO is -260: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -260: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha -260: EXPECTED_ERRNO is -226: RETVAL: 0 -226: STDOUT: Hausdorff distance = 26.315790 -226: Avg average Hausdorff distance = 3.406955 -226: Max average Hausdorff distance = 4.934211 -226: Percent (0.95) Hausdorff distance = 19.736843 -226: Hausdorff distance (boundary) = 26.315790 -226: Avg average Hausdorff distance (boundary) = 7.115030 -226: Max average Hausdorff distance (boundary) = 8.534851 -226: Percent (0.95) Hausdorff distance (boundary) = 26.315790 -226: -226: STDERR: -226: Not an error -237/578 Test #226: plm-dice-c ............................ Passed 0.23 sec -test 263 - Start 263: plm-gamma-a-stats - -263: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -263: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -263: Test timeout computed to be: 1500 209: RETVAL: 0 209: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt 209: Setting PIH from M_SS_IMG @@ -15768,592 +15898,9 @@ 209: 209: STDERR: 209: Not an error -238/578 Test #209: plm-convert-prefix-fcsv ............... Passed 0.41 sec -test 266 - Start 266: plm-gamma-b-stats - -266: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -266: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -266: Test timeout computed to be: 1500 -565: RETVAL: 0 -565: STDOUT: -565: [PLAN] -565: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha -565: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha -565: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha -565: debug : 0 -565: dose norm : 100 -565: -565: [SETTINGS] -565: flavor: a ** -565: homo_approx: n ** -565: ray_step: 1 ** -565: aperture_out: ** -565: proj_dose_out: ** -565: proj_img_out: ** -565: range_comp_out: ** -565: sigma_out: ** -565: wed_out: ** -565: beam_weight: 1 ** -565: -565: [GEOMETRY & APERTURE] -565: source: 0 -2000 0 ** -565: isocenter: 0 0 0 ** -565: vup: 0 0 1 ** -565: offset: 1500 ** -565: ap_center in pixels: 20 20 ** -565: i_res: 41 41 ** -565: spacing: 3.75 3.75 ** -565: source_size: 0 ** -565: ap_file_in: ** -565: rc_file_in: ** -565: smearing: 5 ** -565: -565: [PEAK] -565: E0: P0 -565: spread: P0 -565: weight: P0 -565: -565: Start dose calculation Beam 1 -565: Plan_calc::compute_beam_dose(beam) entry -- -565: Setting RVRTS = 1 -565: FPD = 347.500001, BPD = 649.116731 -565: 41 41 302 -565: Setting RVRTS = 1 -565: FPD = 347.500001, BPD = 649.116731 -565: 41 41 302 -565: Setting RVRTS = 1 -565: FPD = 347.500001, BPD = 649.116731 -565: 41 41 302 -565: Priority 5. Target detected. -565: Compute target wepl_min_max... -565: Apply lateral smearing to the target... -565: Smearing = 5.000000, Smearing_ap = 3.750000 -565: Strel size = (1,1), (3,3) -565: 0 1 0 -565: 1 1 1 -565: 0 1 0 -565: Apply proximal and distal ... -565: Compute max wed... -565: Compute the aperture... -565: Max wed in the target is 117.554 mm. -565: Min wed in the target is 88.5523 mm. -565: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. -565: Min and max energies for treating the PTV: 109 MeV and 130 MeV. -565: -565: 22 Mono-energetic BP used: -565: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 -565: Optimization of the particle number map for any mono-energetic slice in progress... -565: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] -565: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. -565: Dose normalized at the maximum to 1 x 100%. -565: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm -565: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha -565: Sigma: 0.000000 seconds -565: Calc: 1.914139 seconds -565: IO: 0.067413 seconds -565: Reformat: 0.000000 seconds -565: Misc: 0.027888 seconds -565: done. -565: -565: Total execution time : 2.042256 seconds. -565: -565: STDERR: -565: Not an error -263: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -263: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha -263: EXPECTED_ERRNO is -239/578 Test #565: proton-dose-5a ........................ Passed 2.32 sec -test 268 - Start 268: plm-gamma-c - -268: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -268: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -268: Test timeout computed to be: 1500 -232: RETVAL: 0 -232: STDOUT: Hausdorff distance = 45.580288 -232: Avg average Hausdorff distance = 7.072703 -232: Max average Hausdorff distance = 12.121115 -232: Percent (0.95) Hausdorff distance = 22.694012 -232: Hausdorff distance (boundary) = 45.580288 -232: Avg average Hausdorff distance (boundary) = 14.894061 -232: Max average Hausdorff distance (boundary) = 18.384613 -232: Percent (0.95) Hausdorff distance (boundary) = 32.894737 -232: -232: STDERR: -232: Not an error -240/578 Test #232: plm-dice-d ............................ Passed 0.27 sec -test 270 - Start 270: plm-gamma-d - -270: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -270: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -270: Test timeout computed to be: 1500 -268: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -268: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha -268: EXPECTED_ERRNO is -266: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -266: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha -266: EXPECTED_ERRNO is -270: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -270: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha -270: EXPECTED_ERRNO is -224: RETVAL: 0 -224: STDOUT: Time = 0.000618 seconds -224: Time = 0.000652 seconds -224: CENTER_OF_MASS -224: ref 8.39233e-05 8.47711e-06 8.47711e-06 -224: cmp 8.39233e-05 8.47711e-06 8.47711e-06 -224: TP: 729 -224: TN: 103094 -224: FN: 0 -224: FP: 0 -224: DICE: 1.000000 -224: SE: 1.000000 -224: SP: 1.000000 -224: -224: STDERR: -224: Not an error -241/578 Test #224: plm-dice-b ............................ Passed 0.38 sec -test 273 - Start 273: plm-maximum-a-stats - -273: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -273: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -273: Test timeout computed to be: 1500 -238: RETVAL: 0 -238: STDOUT: CENTER_OF_MASS -238: ref 0 0 7.5 -238: cmp 0 0 5 -238: TP: 22120 -238: TN: 6300 -238: FN: 1580 -238: FP: 0 -238: DICE: 0.965517 -238: SE: 0.933333 -238: SP: 1.000000 -238: Hausdorff distance = 5.000000 -238: Avg average Hausdorff distance = 0.100000 -238: Max average Hausdorff distance = 0.200000 -238: Percent (0.95) Hausdorff distance = 1.000000 -238: Hausdorff distance (boundary) = 5.000000 -238: Avg average Hausdorff distance (boundary) = 0.315653 -238: Max average Hausdorff distance (boundary) = 0.453390 -238: Percent (0.95) Hausdorff distance (boundary) = 3.000000 -238: -238: STDERR: -238: Not an error -242/578 Test #238: plm-dice-e ............................ Passed 0.31 sec -273: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -273: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd -273: EXPECTED_ERRNO is -test 276 - Start 276: plm-multiply-a-stats - -276: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -276: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -276: Test timeout computed to be: 1500 -241: RETVAL: 0 -241: STDOUT: CENTER_OF_MASS -241: ref 0 0 7.5 -241: cmp 0 0 7.5 -241: TP: 17380 -241: TN: 4620 -241: FN: 0 -241: FP: 0 -241: DICE: 1.000000 -241: SE: 1.000000 -241: SP: 1.000000 -241: Hausdorff distance = 0.000000 -241: Avg average Hausdorff distance = 0.000000 -241: Max average Hausdorff distance = 0.000000 -241: Percent (0.95) Hausdorff distance = 0.000000 -241: Hausdorff distance (boundary) = 0.000000 -241: Avg average Hausdorff distance (boundary) = 0.000000 -241: Max average Hausdorff distance (boundary) = 0.000000 -241: Percent (0.95) Hausdorff distance (boundary) = 0.000000 -241: -241: STDERR: -241: Not an error -243/578 Test #241: plm-dice-f ............................ Passed 0.29 sec -test 279 - Start 279: plm-multiply-vf-a-stats - -279: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -279: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -279: Test timeout computed to be: 1500 -276: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -276: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd -276: EXPECTED_ERRNO is -279: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -279: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd -279: EXPECTED_ERRNO is -250: RETVAL: 0 -250: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt -250: Creating Histogram... -250: Your Histogram will have 256 bins and will be 0.500000 Gy large -250: checking voxel size... -250: 13.1579 13.1579 13.1579 -250: 13.1579 13.1579 13.1579 -250: Dose and ss-img have the same size. Resample not necessary. -250: -250: STDERR: -250: Not an error -247: RETVAL: 0 -247: STDOUT: Creating Histogram... -247: Your Histogram will have 256 bins and will be 0.500000 Gy large -247: checking voxel size... -247: 13.1579 13.1579 13.1579 -247: 13.1579 13.1579 13.1579 -247: Dose and ss-img have the same size. Resample not necessary. -247: -247: STDERR: -244/578 Test #250: plm-dvh-b ............................. Passed 0.29 sec -test 283 - Start 283: plm-reg-align-center-stats - -283: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-align-center-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -283: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -283: Test timeout computed to be: 1500 -247: Not an error -245/578 Test #247: plm-dvh-a ............................. Passed 0.31 sec -test 286 - Start 286: plm-reg-itk-translation-stats - -286: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -286: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -286: Test timeout computed to be: 1500 -283: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -283: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha -283: EXPECTED_ERRNO is -257: RETVAL: 0 -257: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 -257: -257: STDERR: -257: Not an error -246/578 Test #257: plm-fill-a-stats ...................... Passed 0.31 sec -test 289 - Start 289: plm-reg-itk-rigid-a-stats-1 - -289: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -289: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -289: Test timeout computed to be: 1500 -286: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -286: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha -286: EXPECTED_ERRNO is -263: RETVAL: 0 -263: STDOUT: MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000 -263: -263: STDERR: -263: Not an error -247/578 Test #263: plm-gamma-a-stats ..................... Passed 0.26 sec -test 291 - Start 291: plm-reg-itk-rigid-a-stats-2 - -291: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -291: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -291: Test timeout computed to be: 1500 -289: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -289: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha -289: EXPECTED_ERRNO is -291: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -291: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha -291: EXPECTED_ERRNO is -260: RETVAL: 0 -260: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 -260: -260: STDERR: -260: Not an error -248/578 Test #260: plm-mask-a-stats ...................... Passed 0.37 sec -test 294 - Start 294: plm-reg-itk-similarity-stats-1 - -294: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -294: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -294: Test timeout computed to be: 1500 -294: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -294: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha -294: EXPECTED_ERRNO is -245: RETVAL: 0 -245: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha -245: -245: STDERR: -245: Not an error -249/578 Test #245: plm-dmap-b ............................ Passed 0.46 sec -test 296 - Start 296: plm-reg-itk-similarity-stats-2 - -296: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -296: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -296: Test timeout computed to be: 1500 -276: RETVAL: 0 -276: STDOUT: MIN -0.000000 AVE 0.000000 MAX -0.000000 NONZERO 0 NUMVOX 54872 -276: -276: STDERR: -276: Not an error -253: RETVAL: 0 -253: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502728RTDOSE -253: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502729RTSTRUCT -253: Found DCM_ReferencedFrameOfReferenceSequence! -253: Found DCM_RTReferencedStudySequence! -253: Trying to load rt dose. -253: Load: DoseGridScaling = 0.000000 -253: RTDOSE: dim = 38 38 38 -253: ipp = -243.421005 -243.421005 -243.421005 -253: spc = 13.157900 13.157900 13.157900 -253: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -253: Bits_alloc: 32 -253: Bits_stored: 32 -253: High_bit: 31 -253: Pixel_rep: 0 -253: rc = 1, length = 109744, npix = 54872 -253: Trying to load rt structure set. -253: Adding structure (1), Foreground -253: Structure 1 has color 255\0\0 -253: Rasterizing... -253: Converting... -253: Finished rasterization. -253: Time = 0.021996 seconds -253: Creating Histogram... -253: Your Histogram will have 256 bins and will be 0.500000 Gy large -253: checking voxel size... -253: 0.215872 0.215872 13.1579 -253: 0.215872 0.215872 13.1579 -253: Dose and ss-img have the same size. Resample not necessary. -253: -253: STDERR: -253: Not an error -273: RETVAL: 0 -273: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 -273: -273: STDERR: -250/578 Test #253: plm-dvh-c ............................. Passed 0.48 sec -251/578 Test #276: plm-multiply-a-stats .................. Passed 0.25 sec -273: Not an error -test 299 - Start 299: plm-reg-itk-bspline-stats-1 - -299: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-bspline-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -299: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -299: Test timeout computed to be: 1500 -test 303 - Start 303: plm-reg-itk-demons-stats-2 - -303: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -303: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -303: Test timeout computed to be: 1500 -296: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -296: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha -296: EXPECTED_ERRNO is -268: RETVAL: 0 -268: STDOUT: Gamma dose max is 70.000000 -268: Time = 0.000360 seconds -268: Gamma calculation is under progress... -268: analysis threshold = 7.00 Gy -268: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha -268: Pass rate = 90.719998 % -268: -268: STDERR: -268: Not an error -252/578 Test #268: plm-gamma-c ........................... Passed 0.40 sec -253/578 Test #273: plm-maximum-a-stats ................... Passed 0.32 sec -test 305 - Start 305: plm-reg-itk-demons-diff - -305: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-diff" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -305: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -305: Test timeout computed to be: 1500 -test 307 - Start 307: plm-reg-itk-demons-logd - -307: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -307: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -307: Test timeout computed to be: 1500 -286: RETVAL: 0 -286: STDOUT: MIN -999.914246 AVE -677.557922 MAX 0.000000 NONZERO 43320 NUMVOX 54872 -286: -286: STDERR: -286: Not an error -254/578 Test #286: plm-reg-itk-translation-stats ......... Passed 0.21 sec -266: RETVAL: 0 -266: STDOUT: MIN 0.000000 AVE 0.250000 MAX 2.000000 NONZERO 1000 NUMVOX 8000 -266: -266: STDERR: -test 309 - Start 309: plm-reg-itk-demons-sym-logd - -309: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-sym-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -309: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -309: Test timeout computed to be: 1500 -266: Not an error -299: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -299: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha -299: EXPECTED_ERRNO is -255/578 Test #266: plm-gamma-b-stats ..................... Passed 0.43 sec -test 312 - Start 312: plm-bsp-mse-c-stats - -312: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -312: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -312: Test timeout computed to be: 1500 -279: RETVAL: 0 -279: STDOUT: Min: 100.000 100.000 100.000 -279: Mean: 100.000 100.000 100.000 -279: Max: 100.000 100.000 100.000 -279: Mean abs: 100.000 100.000 100.000 -279: Ave len: 173.205 -279: Jacobian: MINJAC 1 MAXJAC 1 -279: Energy: MINDIL 0 MAXDIL 0 -279: MAXSTRAIN 0 TOTSTRAIN 0 -279: Second derivatives: MINSECDER 0 MAXSECDER 0 -279: AVESECDER 0 INTSECDER 0 -279: Max second derivative at: (1 1 1) -279: -279: STDERR: -279: Not an error -256/578 Test #279: plm-multiply-vf-a-stats ............... Passed 0.28 sec -test 315 - Start 315: plm-bsp-mse-g-stats - -315: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -315: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -315: Test timeout computed to be: 1500 -303: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -303: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha -303: EXPECTED_ERRNO is -305: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -305: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt -305: EXPECTED_ERRNO is -307: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -307: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt -307: EXPECTED_ERRNO is -312: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -312: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha -312: EXPECTED_ERRNO is -309: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -309: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt -309: EXPECTED_ERRNO is -315: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -315: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha -315: EXPECTED_ERRNO is -270: RETVAL: 0 -270: STDOUT: Gamma dose max is 70.000000 -270: Time = 0.005638 seconds -270: Gamma calculation is under progress... -270: analysis threshold = 7.00 Gy -270: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha -270: Pass rate = 89.999998 % -270: -270: STDERR: -270: Not an error -257/578 Test #270: plm-gamma-d ........................... Passed 0.48 sec -test 318 - Start 318: plm-bsp-mse-h-stats - -318: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -318: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -318: Test timeout computed to be: 1500 -283: RETVAL: 0 -283: STDOUT: MIN -0.000061 AVE 0.000001 MAX 0.000061 -283: MAE 0.000002 MSE 0.000000 -283: DIF 2274 NUM 54872 -283: -283: STDERR: -283: Not an error -289: RETVAL: 0 -289: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 -289: -289: STDERR: -289: Not an error -258/578 Test #283: plm-reg-align-center-stats ............ Passed 0.31 sec -test 321 - Start 321: plm-bsp-mse-i-stats - -321: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -321: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -321: Test timeout computed to be: 1500 -259/578 Test #289: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.28 sec -test 324 - Start 324: plm-bsp-mse-k-stats - -324: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -324: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -324: Test timeout computed to be: 1500 -318: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -318: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha -318: EXPECTED_ERRNO is -321: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -321: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha -321: EXPECTED_ERRNO is -324: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -324: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha -324: EXPECTED_ERRNO is -299: RETVAL: 0 -299: STDOUT: MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872 -299: -299: STDERR: -299: Not an error -260/578 Test #299: plm-reg-itk-bspline-stats-1 ........... Passed 0.17 sec -test 327 - Start 327: plm-bsp-mse-l-stats - -327: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-l-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -327: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -327: Test timeout computed to be: 1500 -291: RETVAL: 0 -291: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 -291: -291: STDERR: -291: Not an error -261/578 Test #291: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.32 sec -test 329 - Start 329: plm-bsp-mse-o - -329: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-o" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -329: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -329: Test timeout computed to be: 1500 -294: RETVAL: 0 -294: STDOUT: MIN -1000.000000 AVE -981.187012 MAX 0.000000 NONZERO 54152 NUMVOX 54872 -294: -294: STDERR: -294: Not an error -262/578 Test #294: plm-reg-itk-similarity-stats-1 ........ Passed 0.28 sec -test 331 - Start 331: plm-bsp-mse-p - -331: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-p" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -331: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -331: Test timeout computed to be: 1500 -327: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -327: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha -327: EXPECTED_ERRNO is -329: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -329: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt -329: EXPECTED_ERRNO is -331: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -331: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt -331: EXPECTED_ERRNO is +238: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +238: PARMS is dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd +238: EXPECTED_ERRNO is 562: RETVAL: 0 562: STDOUT: 562: [PLAN] @@ -16655,233 +16202,136 @@ 562: Dose normalized at the maximum to 1 x 100%. 562: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 562: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha -562: Sigma: 0.194678 seconds -562: Calc: 2.333845 seconds -562: IO: 0.053425 seconds -562: Reformat: 0.024275 seconds -562: Misc: 0.011148 seconds +562: Sigma: 0.076888 seconds +562: Calc: 1.080442 seconds +562: IO: 0.027987 seconds +562: Reformat: 0.008989 seconds +562: Misc: 0.009456 seconds 562: done. 562: -562: Total execution time : 2.625740 seconds. +562: Total execution time : 1.203949 seconds. 562: 562: STDERR: 562: Not an error -263/578 Test #562: proton-dose-4d ........................ Passed 2.97 sec -test 333 - Start 333: plm-bsp-mse-q - -333: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-q" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -333: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -333: Test timeout computed to be: 1500 -571: RETVAL: 0 -571: STDOUT: -571: [PLAN] -571: patient : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha -571: target : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha -571: dose_out : /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha -571: debug : 0 -571: dose norm : 100 -571: -571: [SETTINGS] -571: flavor: a ** -571: homo_approx: n ** -571: ray_step: 1 ** -571: aperture_out: ** -571: proj_dose_out: ** -571: proj_img_out: ** -571: range_comp_out: ** -571: sigma_out: ** -571: wed_out: ** -571: beam_weight: 1 ** -571: -571: [GEOMETRY & APERTURE] -571: source: 0 -2000 0 ** -571: isocenter: 0 0 0 ** -571: vup: 0 0 1 ** -571: offset: 1500 ** -571: ap_center in pixels: 20 20 ** -571: i_res: 41 41 ** -571: spacing: 3.75 3.75 ** -571: source_size: 0 ** -571: ap_file_in: ** -571: rc_file_in: ** -571: smearing: 5 ** -571: -571: [PEAK] -571: E0: P0 -571: spread: P0 -571: weight: P0 -571: -571: Start dose calculation Beam 1 -571: Plan_calc::compute_beam_dose(beam) entry -- -571: Setting RVRTS = 1 -571: FPD = 347.500001, BPD = 649.116731 -571: 41 41 302 -571: Setting RVRTS = 1 -571: FPD = 347.500001, BPD = 649.116731 -571: 41 41 302 -571: Setting RVRTS = 1 -571: FPD = 347.500001, BPD = 649.116731 -571: 41 41 302 -571: Priority 5. Target detected. -571: Compute target wepl_min_max... -571: Apply lateral smearing to the target... -571: Smearing = 5.000000, Smearing_ap = 3.750000 -571: Strel size = (1,1), (3,3) -571: 0 1 0 -571: 1 1 1 -571: 0 1 0 -571: Apply proximal and distal ... -571: Compute max wed... -571: Compute the aperture... -571: Max wed in the target is 117.554 mm. -571: Min wed in the target is 88.5523 mm. -571: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. -571: Min and max energies for treating the PTV: 109 MeV and 130 MeV. -571: -571: 22 Mono-energetic BP used: -571: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 -571: Optimization of the particle number map for any mono-energetic slice in progress... -571: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] -571: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. -571: Dose normalized at the maximum to 1 x 100%. -571: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm -571: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha -571: Sigma: 0.000000 seconds -571: Calc: 2.411736 seconds -571: IO: 0.068718 seconds -571: Reformat: 0.000000 seconds -571: Misc: 0.009995 seconds -571: done. -571: -571: Total execution time : 2.540247 seconds. -571: -571: STDERR: -571: Not an error -264/578 Test #571: proton-dose-6a ........................ Passed 2.89 sec -312: RETVAL: 0 -312: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -312: -312: STDERR: -312: Not an error -265/578 Test #312: plm-bsp-mse-c-stats ................... Passed 0.22 sec -test 335 - Start 335: plm-bsp-mse-r +232: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +232: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha +232: EXPECTED_ERRNO is +235/578 Test #562: proton-dose-4d ........................ Passed 1.36 sec +236/578 Test #209: plm-convert-prefix-fcsv ............... Passed 0.15 sec +237/578 Test #214: plm-crop-a-stats ...................... Passed 0.13 sec +test 245 + Start 245: plm-dmap-b -335: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-r" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -335: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -335: Test timeout computed to be: 1500 -test 338 - Start 338: plm-bsp-mi-c-stats +245: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +245: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +245: Test timeout computed to be: 1500 +test 247 + Start 247: plm-dvh-a -338: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -338: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -338: Test timeout computed to be: 1500 -333: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -333: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt -333: EXPECTED_ERRNO is -296: RETVAL: 0 -296: STDOUT: MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872 -296: -296: STDERR: -296: Not an error -266/578 Test #296: plm-reg-itk-similarity-stats-2 ........ Passed 0.31 sec -test 341 - Start 341: plm-bsp-mi-c-2-stats +247: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +247: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +247: Test timeout computed to be: 1500 +test 250 + Start 250: plm-dvh-b -341: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -341: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -341: Test timeout computed to be: 1500 -335: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -335: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt -335: EXPECTED_ERRNO is -338: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -338: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha -338: EXPECTED_ERRNO is -341: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -341: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha -341: EXPECTED_ERRNO is -315: RETVAL: 0 -315: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -315: -315: STDERR: -315: Not an error -267/578 Test #315: plm-bsp-mse-g-stats ................... Passed 0.28 sec -test 344 - Start 344: plm-bsp-mi-k-stats +250: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +250: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +250: Test timeout computed to be: 1500 +217: RETVAL: 0 +217: STDOUT: Type = float +217: Planes = 1 +217: Origin = -14.4737 3.9474 -11.8421 +217: Size = 19 11 4 +217: Spacing = 1.3158 1.3158 1.3158 +217: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +217: +217: STDERR: +217: Not an error +241: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +241: PARMS is dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd +241: EXPECTED_ERRNO is +238/578 Test #217: plm-crop-b-stats ...................... Passed 0.13 sec +test 253 + Start 253: plm-dvh-c -344: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -344: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -344: Test timeout computed to be: 1500 -321: RETVAL: 0 -321: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -321: -321: STDERR: -321: Not an error -303: RETVAL: 0 -303: STDOUT: MIN -999.914856 AVE -754.915161 MAX 0.000000 NONZERO 47950 NUMVOX 54872 -303: -303: STDERR: -344: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -344: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha -344: EXPECTED_ERRNO is -268/578 Test #321: plm-bsp-mse-i-stats ................... Passed 0.24 sec -test 347 - Start 347: plm-bsp-gm-k-stats +253: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +253: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +253: Test timeout computed to be: 1500 +245: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +245: PARMS is dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance +245: EXPECTED_ERRNO is +247: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +247: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv +247: EXPECTED_ERRNO is +220: RETVAL: 0 +220: STDOUT: Type = float +220: Planes = 1 +220: Origin = -9.2105 -9.2105 -9.2105 +220: Size = 15 15 15 +220: Spacing = 1.3158 1.3158 1.3158 +220: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +220: +220: STDERR: +220: Not an error +239/578 Test #220: plm-crop-c-stats ...................... Passed 0.14 sec +test 257 + Start 257: plm-fill-a-stats -347: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-gm-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -347: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -347: Test timeout computed to be: 1500 -303: Not an error -269/578 Test #303: plm-reg-itk-demons-stats-2 ............ Passed 0.35 sec -test 349 - Start 349: plm-bsp-sm-multi-a +257: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +257: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +257: Test timeout computed to be: 1500 +250: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +250: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv +250: EXPECTED_ERRNO is +253: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +253: PARMS is dvh;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv +253: EXPECTED_ERRNO is +257: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +257: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha +257: EXPECTED_ERRNO is +222: RETVAL: 0 +222: STDOUT: CENTER_OF_MASS +222: ref 4.18425e-05 7.62939e-06 7.62939e-06 +222: cmp 19.7369 7.62939e-06 7.62939e-06 +222: TP: 384 +222: TN: 54296 +222: FN: 128 +222: FP: 64 +222: DICE: 0.800000 +222: SE: 0.750000 +222: SP: 0.998823 +222: +222: STDERR: +222: Not an error +240/578 Test #222: plm-dice-a ............................ Passed 0.12 sec +test 260 + Start 260: plm-mask-a-stats -349: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-sm-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -349: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -349: Test timeout computed to be: 1500 -318: RETVAL: 0 -318: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -318: -318: STDERR: -318: Not an error -270/578 Test #318: plm-bsp-mse-h-stats ................... Passed 0.26 sec -test 352 - Start 352: plm-bsp-openmp-stats +260: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +260: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +260: Test timeout computed to be: 1500 +260: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +260: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha +260: EXPECTED_ERRNO is +226: RETVAL: 0 +226: STDOUT: Hausdorff distance = 26.315790 +226: Avg average Hausdorff distance = 3.406955 +226: Max average Hausdorff distance = 4.934211 +226: Percent (0.95) Hausdorff distance = 19.736843 +226: Hausdorff distance (boundary) = 26.315790 +226: Avg average Hausdorff distance (boundary) = 7.115030 +226: Max average Hausdorff distance (boundary) = 8.534851 +226: Percent (0.95) Hausdorff distance (boundary) = 26.315790 +226: +226: STDERR: +226: Not an error +241/578 Test #226: plm-dice-c ............................ Passed 0.15 sec +test 263 + Start 263: plm-gamma-a-stats -352: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -352: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -352: Test timeout computed to be: 1500 -347: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -347: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha -347: EXPECTED_ERRNO is -349: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -349: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt -349: EXPECTED_ERRNO is -352: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -352: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha -352: EXPECTED_ERRNO is +263: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +263: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +263: Test timeout computed to be: 1500 568: RETVAL: 0 568: STDOUT: 568: [PLAN] @@ -17182,36 +16632,618 @@ 568: Trying to write mebs in /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d-pn.txt 568: Ap 41 41 568: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha -568: Sigma: 0.148972 seconds -568: Calc: 2.634194 seconds -568: IO: 0.053608 seconds -568: Reformat: 0.028233 seconds -568: Misc: 0.021307 seconds +568: Sigma: 0.080058 seconds +568: Calc: 1.081823 seconds +568: IO: 0.028805 seconds +568: Reformat: 0.017419 seconds +568: Misc: 0.007398 seconds 568: done. 568: -568: Total execution time : 2.887816 seconds. +568: Total execution time : 1.216043 seconds. 568: 568: STDERR: 568: Not an error -324: RETVAL: 0 -324: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -324: -324: STDERR: -271/578 Test #568: proton-dose-5d ........................ Passed 3.12 sec -test 354 - Start 354: plm-bsp-resume +232: RETVAL: 0 +232: STDOUT: Hausdorff distance = 45.580288 +232: Avg average Hausdorff distance = 7.072703 +232: Max average Hausdorff distance = 12.121115 +232: Percent (0.95) Hausdorff distance = 22.694012 +232: Hausdorff distance (boundary) = 45.580288 +232: Avg average Hausdorff distance (boundary) = 14.894061 +232: Max average Hausdorff distance (boundary) = 18.384613 +232: Percent (0.95) Hausdorff distance (boundary) = 32.894737 +232: +232: STDERR: +232: Not an error +224: RETVAL: 0 +224: STDOUT: Time = 0.000659 seconds +224: Time = 0.000687 seconds +224: CENTER_OF_MASS +224: ref 8.39233e-05 8.47711e-06 8.47711e-06 +224: cmp 8.39233e-05 8.47711e-06 8.47711e-06 +224: TP: 729 +224: TN: 103094 +224: FN: 0 +224: FP: 0 +224: DICE: 1.000000 +224: SE: 1.000000 +224: SP: 1.000000 +224: +224: STDERR: +224: Not an error +242/578 Test #568: proton-dose-5d ........................ Passed 1.38 sec +243/578 Test #224: plm-dice-b ............................ Passed 0.19 sec +244/578 Test #232: plm-dice-d ............................ Passed 0.17 sec +test 266 + Start 266: plm-gamma-b-stats -354: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -354: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -354: Test timeout computed to be: 1500 -324: Not an error -272/578 Test #324: plm-bsp-mse-k-stats ................... Passed 0.31 sec -test 356 - Start 356: plm-bsp-logfile +266: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +266: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +266: Test timeout computed to be: 1500 +test 268 + Start 268: plm-gamma-c -356: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-logfile" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -356: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -356: Test timeout computed to be: 1500 +268: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +268: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +268: Test timeout computed to be: 1500 +test 270 + Start 270: plm-gamma-d + +270: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +270: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +270: Test timeout computed to be: 1500 +245: RETVAL: 0 +245: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha +245: +245: STDERR: +245: Not an error +245/578 Test #245: plm-dmap-b ............................ Passed 0.16 sec +263: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +263: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha +263: EXPECTED_ERRNO is +test 273 + Start 273: plm-maximum-a-stats + +273: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +273: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +273: Test timeout computed to be: 1500 +247: RETVAL: 0 +247: STDOUT: Creating Histogram... +247: Your Histogram will have 256 bins and will be 0.500000 Gy large +247: checking voxel size... +247: 13.1579 13.1579 13.1579 +247: 13.1579 13.1579 13.1579 +247: Dose and ss-img have the same size. Resample not necessary. +247: +247: STDERR: +247: Not an error +246/578 Test #247: plm-dvh-a ............................. Passed 0.16 sec +test 276 + Start 276: plm-multiply-a-stats + +276: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +276: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +276: Test timeout computed to be: 1500 +266: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +266: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha +266: EXPECTED_ERRNO is +241: RETVAL: 0 +241: STDOUT: CENTER_OF_MASS +241: ref 0 0 7.5 +241: cmp 0 0 7.5 +241: TP: 17380 +241: TN: 4620 +241: FN: 0 +241: FP: 0 +241: DICE: 1.000000 +241: SE: 1.000000 +241: SP: 1.000000 +241: Hausdorff distance = 0.000000 +241: Avg average Hausdorff distance = 0.000000 +241: Max average Hausdorff distance = 0.000000 +241: Percent (0.95) Hausdorff distance = 0.000000 +241: Hausdorff distance (boundary) = 0.000000 +241: Avg average Hausdorff distance (boundary) = 0.000000 +241: Max average Hausdorff distance (boundary) = 0.000000 +241: Percent (0.95) Hausdorff distance (boundary) = 0.000000 +241: +241: STDERR: +241: Not an error +247/578 Test #241: plm-dice-f ............................ Passed 0.18 sec +test 279 + Start 279: plm-multiply-vf-a-stats + +279: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +279: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +279: Test timeout computed to be: 1500 +268: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +268: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha +268: EXPECTED_ERRNO is +270: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +270: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha +270: EXPECTED_ERRNO is +273: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +273: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd +273: EXPECTED_ERRNO is +257: RETVAL: 0 +257: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 +257: +257: STDERR: +257: Not an error +248/578 Test #257: plm-fill-a-stats ...................... Passed 0.17 sec +test 283 + Start 283: plm-reg-align-center-stats + +283: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-align-center-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +283: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +283: Test timeout computed to be: 1500 +276: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +276: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd +276: EXPECTED_ERRNO is +279: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +279: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd +279: EXPECTED_ERRNO is +238: RETVAL: 0 +238: STDOUT: CENTER_OF_MASS +238: ref 0 0 7.5 +238: cmp 0 0 5 +238: TP: 22120 +238: TN: 6300 +238: FN: 1580 +238: FP: 0 +238: DICE: 0.965517 +238: SE: 0.933333 +238: SP: 1.000000 +238: Hausdorff distance = 5.000000 +238: Avg average Hausdorff distance = 0.100000 +238: Max average Hausdorff distance = 0.200000 +238: Percent (0.95) Hausdorff distance = 1.000000 +238: Hausdorff distance (boundary) = 5.000000 +238: Avg average Hausdorff distance (boundary) = 0.315653 +238: Max average Hausdorff distance (boundary) = 0.453390 +238: Percent (0.95) Hausdorff distance (boundary) = 3.000000 +238: +238: STDERR: +238: Not an error +249/578 Test #238: plm-dice-e ............................ Passed 0.22 sec +test 286 + Start 286: plm-reg-itk-translation-stats + +286: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +286: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +286: Test timeout computed to be: 1500 +283: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +283: PARMS is compare;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha +283: EXPECTED_ERRNO is +250: RETVAL: 0 +250: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt +250: Creating Histogram... +250: Your Histogram will have 256 bins and will be 0.500000 Gy large +250: checking voxel size... +250: 13.1579 13.1579 13.1579 +250: 13.1579 13.1579 13.1579 +250: Dose and ss-img have the same size. Resample not necessary. +250: +250: STDERR: +250: Not an error +286: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +286: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha +286: EXPECTED_ERRNO is +250/578 Test #250: plm-dvh-b ............................. Passed 0.21 sec +test 289 + Start 289: plm-reg-itk-rigid-a-stats-1 + +289: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +289: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +289: Test timeout computed to be: 1500 +289: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +289: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha +289: EXPECTED_ERRNO is +253: RETVAL: 0 +253: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757252RTDOSE +253: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757253RTSTRUCT +253: Found DCM_ReferencedFrameOfReferenceSequence! +253: Found DCM_RTReferencedStudySequence! +253: Trying to load rt dose. +253: Load: DoseGridScaling = 0.000000 +253: RTDOSE: dim = 38 38 38 +253: ipp = -243.421005 -243.421005 -243.421005 +253: spc = 13.157900 13.157900 13.157900 +253: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +253: Bits_alloc: 32 +253: Bits_stored: 32 +253: High_bit: 31 +253: Pixel_rep: 0 +253: rc = 1, length = 109744, npix = 54872 +253: Trying to load rt structure set. +253: Adding structure (1), Foreground +253: Structure 1 has color 255\0\0 +253: Rasterizing... +253: Converting... +253: Finished rasterization. +253: Time = 0.013191 seconds +253: Creating Histogram... +253: Your Histogram will have 256 bins and will be 0.500000 Gy large +253: checking voxel size... +253: 0.215872 0.215872 13.1579 +253: 0.215872 0.215872 13.1579 +253: Dose and ss-img have the same size. Resample not necessary. +253: +253: STDERR: +253: Not an error +251/578 Test #253: plm-dvh-c ............................. Passed 0.24 sec +test 291 + Start 291: plm-reg-itk-rigid-a-stats-2 + +291: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +291: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +291: Test timeout computed to be: 1500 +260: RETVAL: 0 +260: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 +260: +260: STDERR: +260: Not an error +252/578 Test #260: plm-mask-a-stats ...................... Passed 0.20 sec +test 294 + Start 294: plm-reg-itk-similarity-stats-1 + +294: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +294: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +294: Test timeout computed to be: 1500 +291: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +291: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha +291: EXPECTED_ERRNO is +263: RETVAL: 0 +263: STDOUT: MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000 +263: +263: STDERR: +263: Not an error +253/578 Test #263: plm-gamma-a-stats ..................... Passed 0.18 sec +test 296 + Start 296: plm-reg-itk-similarity-stats-2 + +296: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +296: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +296: Test timeout computed to be: 1500 +294: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +294: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha +294: EXPECTED_ERRNO is +266: RETVAL: 0 +266: STDOUT: MIN 0.000000 AVE 0.250000 MAX 2.000000 NONZERO 1000 NUMVOX 8000 +266: +266: STDERR: +273: RETVAL: 0 +273: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 +273: +273: STDERR: +266: Not an error +273: Not an error +254/578 Test #273: plm-maximum-a-stats ................... Passed 0.13 sec +test 299 + Start 299: plm-reg-itk-bspline-stats-1 + +299: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-bspline-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +299: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +299: Test timeout computed to be: 1500 +255/578 Test #266: plm-gamma-b-stats ..................... Passed 0.15 sec +296: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +296: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha +296: EXPECTED_ERRNO is +test 303 + Start 303: plm-reg-itk-demons-stats-2 + +303: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +303: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +303: Test timeout computed to be: 1500 +279: RETVAL: 0 +279: STDOUT: Min: 100.000 100.000 100.000 +279: Mean: 100.000 100.000 100.000 +279: Max: 100.000 100.000 100.000 +279: Mean abs: 100.000 100.000 100.000 +279: Ave len: 173.205 +279: Jacobian: MINJAC 1 MAXJAC 1 +279: Energy: MINDIL 0 MAXDIL 0 +279: MAXSTRAIN 0 TOTSTRAIN 0 +279: Second derivatives: MINSECDER 0 MAXSECDER 0 +279: AVESECDER 0 INTSECDER 0 +279: Max second derivative at: (1 1 1) +279: +279: STDERR: +276: RETVAL: 0 +276: STDOUT: MIN -0.000000 AVE 0.000000 MAX -0.000000 NONZERO 0 NUMVOX 54872 +276: +276: STDERR: +279: Not an error +256/578 Test #279: plm-multiply-vf-a-stats ............... Passed 0.13 sec +276: Not an error +test 305 + Start 305: plm-reg-itk-demons-diff + +305: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-diff" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +305: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +305: Test timeout computed to be: 1500 +257/578 Test #276: plm-multiply-a-stats .................. Passed 0.13 sec +270: RETVAL: 0 +270: STDOUT: Gamma dose max is 70.000000 +270: Time = 0.000434 seconds +270: Gamma calculation is under progress... +270: analysis threshold = 7.00 Gy +270: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha +270: Pass rate = 89.999998 % +270: +270: STDERR: +test 307 + Start 307: plm-reg-itk-demons-logd + +307: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +307: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +307: Test timeout computed to be: 1500 +270: Not an error +258/578 Test #270: plm-gamma-d ........................... Passed 0.15 sec +test 309 + Start 309: plm-reg-itk-demons-sym-logd + +309: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-sym-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +309: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +309: Test timeout computed to be: 1500 +299: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +299: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha +299: EXPECTED_ERRNO is +283: RETVAL: 0 +283: STDOUT: MIN -0.000061 AVE 0.000001 MAX 0.000061 +283: MAE 0.000002 MSE 0.000000 +283: DIF 2274 NUM 54872 +283: +283: STDERR: +303: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +303: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha +303: EXPECTED_ERRNO is +283: Not an error +259/578 Test #283: plm-reg-align-center-stats ............ Passed 0.12 sec +test 312 + Start 312: plm-bsp-mse-c-stats + +312: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +312: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +312: Test timeout computed to be: 1500 +305: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +305: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt +305: EXPECTED_ERRNO is +268: RETVAL: 0 +268: STDOUT: Gamma dose max is 70.000000 +268: Time = 0.000479 seconds +268: Gamma calculation is under progress... +268: analysis threshold = 7.00 Gy +268: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha +268: Pass rate = 90.719998 % +268: +268: STDERR: +268: Not an error +307: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +307: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt +307: EXPECTED_ERRNO is +309: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +309: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt +309: EXPECTED_ERRNO is +260/578 Test #268: plm-gamma-c ........................... Passed 0.17 sec +test 315 + Start 315: plm-bsp-mse-g-stats + +315: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +315: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +315: Test timeout computed to be: 1500 +312: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +312: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha +312: EXPECTED_ERRNO is +315: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +315: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha +315: EXPECTED_ERRNO is +286: RETVAL: 0 +286: STDOUT: MIN -999.914246 AVE -677.557922 MAX 0.000000 NONZERO 43320 NUMVOX 54872 +286: +286: STDERR: +286: Not an error +261/578 Test #286: plm-reg-itk-translation-stats ......... Passed 0.13 sec +test 318 + Start 318: plm-bsp-mse-h-stats + +318: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +318: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +318: Test timeout computed to be: 1500 +289: RETVAL: 0 +289: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 +289: +289: STDERR: +289: Not an error +262/578 Test #289: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.13 sec +test 321 + Start 321: plm-bsp-mse-i-stats + +321: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +321: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +321: Test timeout computed to be: 1500 +318: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +318: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha +318: EXPECTED_ERRNO is +291: RETVAL: 0 +291: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 +291: +291: STDERR: +291: Not an error +321: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +321: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha +321: EXPECTED_ERRNO is +263/578 Test #291: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.12 sec +test 324 + Start 324: plm-bsp-mse-k-stats + +324: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +324: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +324: Test timeout computed to be: 1500 +294: RETVAL: 0 +294: STDOUT: MIN -1000.000000 AVE -981.187012 MAX 0.000000 NONZERO 54152 NUMVOX 54872 +294: +294: STDERR: +294: Not an error +324: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +324: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha +324: EXPECTED_ERRNO is +264/578 Test #294: plm-reg-itk-similarity-stats-1 ........ Passed 0.12 sec +test 327 + Start 327: plm-bsp-mse-l-stats + +327: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-l-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +327: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +327: Test timeout computed to be: 1500 +327: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +327: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha +327: EXPECTED_ERRNO is +296: RETVAL: 0 +296: STDOUT: MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872 +296: +296: STDERR: +296: Not an error +265/578 Test #296: plm-reg-itk-similarity-stats-2 ........ Passed 0.14 sec +test 329 + Start 329: plm-bsp-mse-o + +329: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-o" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +329: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +329: Test timeout computed to be: 1500 +299: RETVAL: 0 +299: STDOUT: MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872 +299: +299: STDERR: +299: Not an error +303: RETVAL: 0 +303: STDOUT: MIN -999.914856 AVE -754.915161 MAX 0.000000 NONZERO 47950 NUMVOX 54872 +303: +303: STDERR: +303: Not an error +266/578 Test #299: plm-reg-itk-bspline-stats-1 ........... Passed 0.13 sec +test 331 + Start 331: plm-bsp-mse-p + +331: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-p" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +331: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +331: Test timeout computed to be: 1500 +267/578 Test #303: plm-reg-itk-demons-stats-2 ............ Passed 0.13 sec +test 333 + Start 333: plm-bsp-mse-q + +333: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-q" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +333: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +333: Test timeout computed to be: 1500 +333: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +333: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt +333: EXPECTED_ERRNO is +312: RETVAL: 0 +312: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +312: +312: STDERR: +312: Not an error +268/578 Test #312: plm-bsp-mse-c-stats ................... Passed 0.13 sec +315: RETVAL: 0 +315: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +315: +315: STDERR: +315: Not an error +329: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +329: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt +329: EXPECTED_ERRNO is +test 335 + Start 335: plm-bsp-mse-r + +335: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-r" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +335: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +335: Test timeout computed to be: 1500 +331: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +331: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt +331: EXPECTED_ERRNO is +269/578 Test #315: plm-bsp-mse-g-stats ................... Passed 0.13 sec +test 338 + Start 338: plm-bsp-mi-c-stats + +338: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +338: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +338: Test timeout computed to be: 1500 +318: RETVAL: 0 +318: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +318: +318: STDERR: +318: Not an error +270/578 Test #318: plm-bsp-mse-h-stats ................... Passed 0.13 sec +test 341 + Start 341: plm-bsp-mi-c-2-stats + +341: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +341: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +341: Test timeout computed to be: 1500 +335: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +335: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt +335: EXPECTED_ERRNO is +338: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +338: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha +338: EXPECTED_ERRNO is +341: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +341: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha +341: EXPECTED_ERRNO is +321: RETVAL: 0 +321: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +321: +321: STDERR: +321: Not an error +271/578 Test #321: plm-bsp-mse-i-stats ................... Passed 0.16 sec +test 344 + Start 344: plm-bsp-mi-k-stats + +344: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +344: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +344: Test timeout computed to be: 1500 +344: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +344: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha +344: EXPECTED_ERRNO is +305: RETVAL: 0 +305: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +305: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +305: Launching registration worker thread +305: Inside registration worker thread +305: Doing registration stage +305: [1] xf_in->m_type = 0, xf_out->m_type = 0 +305: Ready to start registration. +305: MSE [ 0] 18945.891 [ 0.025 secs] +305: MSE [ 1] 9795.787 [ 0.019 secs] +305: MSE [ 2] 3911.273 [ 0.016 secs] +305: MSE [ 3] 1186.045 [ 0.017 secs] +305: MSE [ 4] 314.763 [ 0.018 secs] +305: Done with registration. Writing output... +305: Deformation stats (out) +305: VF_MAX = 102.433 VF_AVG = 31.2783 +305: [2] xf_out->m_type = 8, xf_in->m_type = 0 +305: ** Registration worker thread finished. +305: Warping... +305: plm_warp_itk: xform_to_itk_vf +305: plm_warp_itk: convert_to_itk +305: plm_warp_itk: warping... +305: Saving image... +305: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-img.mha +305: Saving vf... +305: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-vf.mha +305: Load: 0.0298831 +305: Run: 0.0984349 +305: Save: 0.00303006 +305: Total: 0.131348 +305: Finished! +305: +305: STDERR: +305: Not an error +272/578 Test #305: plm-reg-itk-demons-diff ............... Passed 0.24 sec +test 347 + Start 347: plm-bsp-gm-k-stats + +347: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-gm-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +347: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +347: Test timeout computed to be: 1500 307: RETVAL: 0 307: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 307: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -17220,11 +17252,11 @@ 307: Doing registration stage 307: [1] xf_in->m_type = 0, xf_out->m_type = 0 307: Ready to start registration. -307: MSE [ 0] 18945.891 [ 0.022 secs] -307: MSE [ 1] 9788.487 [ 0.036 secs] +307: MSE [ 0] 18945.891 [ 0.010 secs] +307: MSE [ 1] 9788.487 [ 0.023 secs] 307: MSE [ 2] 4038.212 [ 0.027 secs] -307: MSE [ 3] 1283.245 [ 0.037 secs] -307: MSE [ 4] 392.878 [ 0.046 secs] +307: MSE [ 3] 1283.245 [ 0.021 secs] +307: MSE [ 4] 392.878 [ 0.026 secs] 307: Done with registration. Writing output... 307: Deformation stats (out) 307: VF_MAX = 112.668 VF_AVG = 32.7138 @@ -17238,220 +17270,57 @@ 307: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd-img.mha 307: Saving vf... 307: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd-vf.mha -307: Load: 0.0402679 -307: Run: 0.175849 -307: Save: 0.00459409 -307: Total: 0.220711 +307: Load: 0.0355361 +307: Run: 0.108194 +307: Save: 0.00447893 +307: Total: 0.148209 307: Finished! 307: 307: STDERR: 307: Not an error -354: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -354: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt -354: EXPECTED_ERRNO is -273/578 Test #307: plm-reg-itk-demons-logd ............... Passed 0.42 sec -test 359 - Start 359: plm-bsp-ushort-stats +347: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +347: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha +347: EXPECTED_ERRNO is +273/578 Test #307: plm-reg-itk-demons-logd ............... Passed 0.26 sec +test 349 + Start 349: plm-bsp-sm-multi-a -359: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -359: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -359: Test timeout computed to be: 1500 -356: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -356: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt -356: EXPECTED_ERRNO is +349: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-sm-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +349: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +349: Test timeout computed to be: 1500 +324: RETVAL: 0 +324: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +324: +324: STDERR: +324: Not an error +274/578 Test #324: plm-bsp-mse-k-stats ................... Passed 0.20 sec +test 352 + Start 352: plm-bsp-openmp-stats + +352: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +352: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +352: Test timeout computed to be: 1500 +352: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +352: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha +352: EXPECTED_ERRNO is +349: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +349: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt +349: EXPECTED_ERRNO is 327: RETVAL: 0 327: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 327: 327: STDERR: 327: Not an error -305: RETVAL: 0 -305: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -305: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -305: Launching registration worker thread -305: Inside registration worker thread -305: Doing registration stage -305: [1] xf_in->m_type = 0, xf_out->m_type = 0 -305: Ready to start registration. -305: MSE [ 0] 18945.891 [ 0.056 secs] -305: MSE [ 1] 9795.787 [ 0.021 secs] -305: MSE [ 2] 3911.273 [ 0.027 secs] -305: MSE [ 3] 1186.045 [ 0.028 secs] -305: MSE [ 4] 314.763 [ 0.031 secs] -305: Done with registration. Writing output... -305: Deformation stats (out) -305: VF_MAX = 102.433 VF_AVG = 31.2783 -305: [2] xf_out->m_type = 8, xf_in->m_type = 0 -305: ** Registration worker thread finished. -305: Warping... -305: plm_warp_itk: xform_to_itk_vf -305: plm_warp_itk: convert_to_itk -305: plm_warp_itk: warping... -305: Saving image... -305: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-img.mha -305: Saving vf... -305: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-vf.mha -305: Load: 0.0390079 -305: Run: 0.167235 -305: Save: 0.010927 -305: Total: 0.21717 -305: Finished! -305: -305: STDERR: -305: Not an error -274/578 Test #327: plm-bsp-mse-l-stats ................... Passed 0.30 sec -test 362 - Start 362: plm-bsp-double-stats - -362: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -362: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -362: Test timeout computed to be: 1500 -275/578 Test #305: plm-reg-itk-demons-diff ............... Passed 0.46 sec -test 366 - Start 366: plm-bsp-char-output-stats - -366: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -366: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -366: Test timeout computed to be: 1500 -359: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -359: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha -359: EXPECTED_ERRNO is -366: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -366: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha -366: EXPECTED_ERRNO is -362: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -362: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha -362: EXPECTED_ERRNO is -347: RETVAL: 0 -347: STDOUT: MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872 -347: -347: STDERR: -347: Not an error -276/578 Test #347: plm-bsp-gm-k-stats .................... Passed 0.19 sec -test 368 - Start 368: plm-bsp-rect - -368: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-rect" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -368: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -368: Test timeout computed to be: 1500 -341: RETVAL: 0 -341: STDOUT: MIN -991.894104 AVE -128.919357 MAX 0.000000 NONZERO 48385 NUMVOX 54872 -341: -341: STDERR: -341: Not an error -277/578 Test #341: plm-bsp-mi-c-2-stats .................. Passed 0.29 sec -test 370 - Start 370: plm-bsp-regularize-none-stats - -370: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -370: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -370: Test timeout computed to be: 1500 -368: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -368: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt -368: EXPECTED_ERRNO is -370: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -370: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha -370: EXPECTED_ERRNO is -309: RETVAL: 0 -309: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -309: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -309: Launching registration worker thread -309: Inside registration worker thread -309: Doing registration stage -309: [1] xf_in->m_type = 0, xf_out->m_type = 0 -309: Ready to start registration. -309: MSE [ 0] 18945.891 [ 0.022 secs] -309: MSE [ 1] 9778.825 [ 0.029 secs] -309: MSE [ 2] 3980.165 [ 0.039 secs] -309: MSE [ 3] 1233.515 [ 0.057 secs] -309: MSE [ 4] 374.936 [ 0.038 secs] -309: Done with registration. Writing output... -309: Deformation stats (out) -309: VF_MAX = 109.365 VF_AVG = 31.9237 -309: [2] xf_out->m_type = 8, xf_in->m_type = 0 -309: ** Registration worker thread finished. -309: Warping... -309: plm_warp_itk: xform_to_itk_vf -309: plm_warp_itk: convert_to_itk -309: plm_warp_itk: warping... -309: Saving image... -309: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-img.mha -309: Saving vf... -309: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-vf.mha -309: Load: 0.055373 -309: Run: 0.193978 -309: Save: 0.00864792 -309: Total: 0.257999 -309: Finished! -309: -309: STDERR: -309: Not an error -278/578 Test #309: plm-reg-itk-demons-sym-logd ........... Passed 0.60 sec -test 373 - Start 373: plm-bsp-regularize-analytic-stats - -373: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -373: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -373: Test timeout computed to be: 1500 -338: RETVAL: 0 -338: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 -338: -338: STDERR: -338: Not an error -279/578 Test #338: plm-bsp-mi-c-stats .................... Passed 0.40 sec -test 376 - Start 376: plm-bsp-regularize-numeric-stats - -376: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -376: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -376: Test timeout computed to be: 1500 -352: RETVAL: 0 -352: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -352: -352: STDERR: -352: Not an error -280/578 Test #352: plm-bsp-openmp-stats .................. Passed 0.31 sec -test 380 - Start 380: plm-bsp-landmark-b-stats - -380: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -380: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -380: Test timeout computed to be: 1500 -362: RETVAL: 0 -362: STDOUT: MIN 0.000000 AVE 108.147682 MAX 998.045227 NONZERO 46833 NUMVOX 54872 -362: -362: STDERR: -362: Not an error -376: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -376: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha -376: EXPECTED_ERRNO is -281/578 Test #362: plm-bsp-double-stats .................. Passed 0.26 sec -test 383 - Start 383: plm-bsp-landmark-c-stats - -383: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -383: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -383: Test timeout computed to be: 1500 -373: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -373: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha -373: EXPECTED_ERRNO is -383: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -383: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha -383: EXPECTED_ERRNO is -380: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -380: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha -380: EXPECTED_ERRNO is -344: RETVAL: 0 -344: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 -344: -344: STDERR: -344: Not an error -282/578 Test #344: plm-bsp-mi-k-stats .................... Passed 0.48 sec -test 386 - Start 386: plm-bsp-landmark-d-stats +275/578 Test #327: plm-bsp-mse-l-stats ................... Passed 0.25 sec +test 354 + Start 354: plm-bsp-resume -386: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -386: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -386: Test timeout computed to be: 1500 +354: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +354: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +354: Test timeout computed to be: 1500 +354: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +354: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt +354: EXPECTED_ERRNO is 333: RETVAL: 0 333: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 333: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -17485,19 +17354,19 @@ 333: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.002 s ] 333: CMIN 0.00 CAVG 0.00 CMAX 0.00 333: LSD 0.00 -333: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.001 s ] +333: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.003 s ] 333: CMIN -0.05 CAVG 0.01 CMAX 0.68 333: LSD 1.00 -333: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.006 s ] +333: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.001 s ] 333: CMIN -0.27 CAVG 0.05 CMAX 3.40 333: LSD 5.00 333: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.001 s ] 333: CMIN -2.31 CAVG 0.43 CMAX 26.12 333: LSD 35.51 -333: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.004 s ] +333: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.001 s ] 333: CMIN -2.36 CAVG 0.35 CMAX 22.13 333: LSD 6.00 -333: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.001 s ] +333: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.002 s ] 333: CMIN -2.20 CAVG 0.36 CMAX 21.85 333: LSD 1.43 333: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -17528,14 +17397,122 @@ 333: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha 333: Saving vf... 333: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-vf.mha -333: Load: 0.080832 -333: Run: 0.03351 -333: Save: 0.0669589 -333: Total: 0.181301 +333: Load: 0.0181811 +333: Run: 0.0150139 +333: Save: 0.0446272 +333: Total: 0.0778222 333: Finished! 333: 333: STDERR: 333: Not an error +276/578 Test #333: plm-bsp-mse-q ......................... Passed 0.26 sec +test 356 + Start 356: plm-bsp-logfile + +356: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-logfile" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +356: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +356: Test timeout computed to be: 1500 +309: RETVAL: 0 +309: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +309: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +309: Launching registration worker thread +309: Inside registration worker thread +309: Doing registration stage +309: [1] xf_in->m_type = 0, xf_out->m_type = 0 +309: Ready to start registration. +309: MSE [ 0] 18945.891 [ 0.036 secs] +309: MSE [ 1] 9778.825 [ 0.043 secs] +309: MSE [ 2] 3980.165 [ 0.027 secs] +309: MSE [ 3] 1233.515 [ 0.038 secs] +309: MSE [ 4] 374.936 [ 0.062 secs] +309: Done with registration. Writing output... +309: Deformation stats (out) +309: VF_MAX = 109.365 VF_AVG = 31.9237 +309: [2] xf_out->m_type = 8, xf_in->m_type = 0 +309: ** Registration worker thread finished. +309: Warping... +309: plm_warp_itk: xform_to_itk_vf +309: plm_warp_itk: convert_to_itk +309: plm_warp_itk: warping... +309: Saving image... +309: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-img.mha +309: Saving vf... +309: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-vf.mha +309: Load: 0.0186381 +309: Run: 0.220858 +309: Save: 0.009552 +309: Total: 0.249048 +309: Finished! +309: +309: STDERR: +309: Not an error +277/578 Test #309: plm-reg-itk-demons-sym-logd ........... Passed 0.40 sec +test 359 + Start 359: plm-bsp-ushort-stats + +359: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +359: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +359: Test timeout computed to be: 1500 +356: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +356: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt +356: EXPECTED_ERRNO is +359: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +359: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha +359: EXPECTED_ERRNO is +344: RETVAL: 0 +344: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 +344: +344: STDERR: +344: Not an error +338: RETVAL: 0 +338: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 +338: +338: STDERR: +338: Not an error +341: RETVAL: 0 +341: STDOUT: MIN -991.894104 AVE -128.919357 MAX 0.000000 NONZERO 48385 NUMVOX 54872 +341: +341: STDERR: +341: Not an error +278/578 Test #338: plm-bsp-mi-c-stats .................... Passed 0.33 sec +279/578 Test #344: plm-bsp-mi-k-stats .................... Passed 0.28 sec +280/578 Test #341: plm-bsp-mi-c-2-stats .................. Passed 0.33 sec +test 362 + Start 362: plm-bsp-double-stats + +362: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +362: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +362: Test timeout computed to be: 1500 +test 366 + Start 366: plm-bsp-char-output-stats + +366: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +366: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +366: Test timeout computed to be: 1500 +test 368 + Start 368: plm-bsp-rect + +368: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-rect" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +368: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +368: Test timeout computed to be: 1500 +362: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +362: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha +362: EXPECTED_ERRNO is +366: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +366: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha +347: RETVAL: 0 +347: STDOUT: MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872 +347: +347: STDERR: +366: EXPECTED_ERRNO is +347: Not an error +281/578 Test #347: plm-bsp-gm-k-stats .................... Passed 0.30 sec +test 370 + Start 370: plm-bsp-regularize-none-stats + +370: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +370: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +370: Test timeout computed to be: 1500 329: RETVAL: 0 329: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 329: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -17569,19 +17546,19 @@ 329: [ 0, 0] MSE 18756.248 NV 6859 GM -2992.626 GN 812 [ 0.002 s ] 329: CMIN 0.00 CAVG 0.00 CMAX 0.00 329: LSD 0.00 -329: [ 0, 1] MSE 17839.281 NV 6859 GM -3669.916 GN 971 [ 0.002 s ] +329: [ 0, 1] MSE 17839.281 NV 6859 GM -3669.916 GN 971 [ 0.006 s ] 329: CMIN -0.06 CAVG 0.01 CMAX 0.67 329: LSD 1.00 -329: [ 0, 2] MSE 14291.201 NV 6844 GM -3069.703 GN 827 [ 0.003 s ] +329: [ 0, 2] MSE 14291.201 NV 6844 GM -3069.703 GN 827 [ 0.002 s ] 329: CMIN -0.32 CAVG 0.05 CMAX 3.36 329: LSD 5.00 -329: [ 0, 3] MSE 3942.469 NV 6280 GM -1514.267 GN 474 [ 0.002 s ] +329: [ 0, 3] MSE 3942.469 NV 6280 GM -1514.267 GN 474 [ 0.006 s ] 329: CMIN -1.35 CAVG 0.21 CMAX 14.12 329: LSD 21.00 329: [ 1, 4] MSE 6518.217 NV 5156 GM 1242.011 GN 628 [ 0.001 s ] 329: CMIN -2.29 CAVG 0.47 CMAX 37.57 329: LSD 35.84 -329: [ 1, 5] MSE 347.073 NV 5829 GM -219.984 GN 76.6 [ 0.014 s ] +329: [ 1, 5] MSE 347.073 NV 5829 GM -219.984 GN 76.6 [ 0.001 s ] 329: CMIN -1.44 CAVG 0.32 CMAX 24.31 329: LSD 15.58 329: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -17612,58 +17589,263 @@ 329: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha 329: Saving vf... 329: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-vf.mha -329: Load: 0.066267 -329: Run: 0.061604 -329: Save: 0.114583 -329: Total: 0.242454 +329: Load: 0.0930099 +329: Run: 0.0247521 +329: Save: 0.069823 +329: Total: 0.187585 329: Finished! 329: 329: STDERR: -283/578 Test #333: plm-bsp-mse-q ......................... Passed 0.58 sec 329: Not an error -test 389 - Start 389: plm-bsp-landmark-e-stats +368: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +368: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt +368: EXPECTED_ERRNO is +282/578 Test #329: plm-bsp-mse-o ......................... Passed 0.45 sec +test 373 + Start 373: plm-bsp-regularize-analytic-stats -389: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -389: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -389: Test timeout computed to be: 1500 -284/578 Test #329: plm-bsp-mse-o ......................... Passed 0.65 sec -test 392 - Start 392: plm-bsp-dcos-a-stats +373: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +373: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +373: Test timeout computed to be: 1500 +370: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +370: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha +370: EXPECTED_ERRNO is +335: RETVAL: 0 +335: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +335: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +335: Launching registration worker thread +335: Inside registration worker thread +335: Doing registration stage +335: [1] xf_in->m_type = 0, xf_out->m_type = 0 +335: RESAMPLE 1 1: (2 2 2), (2 2 2) +335: RESAMPLE 1 1: (2 2 2), (2 2 2) +335: volume_calc_grad complete. +335: bspline_xform_initialize +335: rdims = (2,2,2) +335: vox_per_rgn = (11,11,11) +335: cdims = (5 5 5) +335: Algorithm flavor = r +335: Threading = 0 +335: >> Checking JH allocation +335: BSPLINE PARMS +335: max_its = 5 +335: max_feval = 5 +335: BSPLINE XFORM HEADER +335: vox_per_rgn = 11 11 11 +335: roi_offset = 0 0 0 +335: roi_dim = 19 19 19 +335: img_dc = 1 0 0 0 1 0 0 0 1 +335: BST METRICS +335: MET 110100 MSE 1.000000 +335: Setting nmax, mmax = 375 21 +335: >>> START +335: This problem is unconstrained. +335: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.051 s ] +335: CMIN 0.00 CAVG 0.00 CMAX 0.00 +335: LSD 0.00 +335: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.037 s ] +335: CMIN -0.05 CAVG 0.01 CMAX 0.68 +335: LSD 1.00 +335: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.041 s ] +335: CMIN -0.27 CAVG 0.05 CMAX 3.40 +335: LSD 5.00 +335: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.016 s ] +335: CMIN -2.31 CAVG 0.43 CMAX 26.12 +335: LSD 35.51 +335: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.032 s ] +335: CMIN -2.36 CAVG 0.35 CMAX 22.13 +335: LSD 6.00 +335: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.036 s ] +335: CMIN -2.20 CAVG 0.36 CMAX 21.85 +335: LSD 1.43 +335: [2] xf_out->m_type = 9, xf_in->m_type = 0 +335: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +335: bspline_xform_initialize +335: rdims = (2,2,2) +335: vox_per_rgn = (22,22,22) +335: cdims = (5 5 5) +335: ** Registration worker thread finished. +335: Writing transformation ... +335: Warping... +335: Running: plm_warp_native +335: Converting input image... +335: Converting xform... +335: bspline_xform_initialize +335: rdims = (2,2,2) +335: vox_per_rgn = (22,22,22) +335: cdims = (5 5 5) +335: Creating output vf... +335: Creating output volume... +335: Running native warper... +335: bspline_warp complete. +335: Back convert to original type... +335: > Convert vf to itk +335: > Conversion complete. +335: plm_warp_native is complete. +335: Saving image... +335: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha +335: Saving vf... +335: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-vf.mha +335: Load: 0.017509 +335: Run: 0.234745 +335: Save: 0.027195 +335: Total: 0.279449 +335: Finished! +335: +335: STDERR: +335: Not an error +283/578 Test #335: plm-bsp-mse-r ......................... Passed 0.43 sec +test 376 + Start 376: plm-bsp-regularize-numeric-stats -392: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -392: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -392: Test timeout computed to be: 1500 +376: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +376: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +376: Test timeout computed to be: 1500 +373: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +373: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha +373: EXPECTED_ERRNO is +331: RETVAL: 0 +331: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha +331: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha +331: Launching registration worker thread +331: Inside registration worker thread +331: Doing registration stage +331: [1] xf_in->m_type = 0, xf_out->m_type = 0 +331: RESAMPLE 1 1: (2 2 2), (2 2 2) +331: RESAMPLE 1 1: (2 2 2), (2 2 2) +331: volume_calc_grad complete. +331: bspline_xform_initialize +331: rdims = (2,2,2) +331: vox_per_rgn = (11,11,11) +331: cdims = (5 5 5) +331: Algorithm flavor = p +331: Threading = 0 +331: >> Checking JH allocation +331: BSPLINE PARMS +331: max_its = 5 +331: max_feval = 5 +331: BSPLINE XFORM HEADER +331: vox_per_rgn = 11 11 11 +331: roi_offset = 0 0 0 +331: roi_dim = 19 19 19 +331: img_dc = 1 0 0 0 1 0 0 0 1 +331: BST METRICS +331: MET 110100 MSE 1.000000 +331: Setting nmax, mmax = 375 21 +331: >>> START +331: This problem is unconstrained. +331: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.047 s ] +331: CMIN 0.00 CAVG 0.00 CMAX 0.00 +331: LSD 0.00 +331: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.016 s ] +331: CMIN -0.05 CAVG 0.01 CMAX 0.68 +331: LSD 1.00 +331: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.032 s ] +331: CMIN -0.27 CAVG 0.05 CMAX 3.40 +331: LSD 5.00 +331: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.028 s ] +331: CMIN -2.31 CAVG 0.43 CMAX 26.12 +331: LSD 35.51 +331: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.020 s ] +331: CMIN -2.36 CAVG 0.35 CMAX 22.13 +331: LSD 6.00 +331: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.041 s ] +331: CMIN -2.20 CAVG 0.36 CMAX 21.85 +331: LSD 1.43 +331: [2] xf_out->m_type = 9, xf_in->m_type = 0 +331: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +331: bspline_xform_initialize +331: rdims = (2,2,2) +331: vox_per_rgn = (22,22,22) +331: cdims = (5 5 5) +331: ** Registration worker thread finished. +331: Writing transformation ... +331: Warping... +331: Running: plm_warp_native +331: Converting input image... +331: Converting xform... +331: bspline_xform_initialize +331: rdims = (2,2,2) +331: vox_per_rgn = (22,22,22) +331: cdims = (5 5 5) +331: Creating output vf... +331: Creating output volume... +331: Running native warper... +331: bspline_warp complete. +331: Back convert to original type... +331: > Convert vf to itk +331: > Conversion complete. +331: plm_warp_native is complete. +331: Saving image... +331: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha +331: Saving vf... +331: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-vf.mha +331: Load: 0.0311539 +331: Run: 0.219081 +331: Save: 0.024034 +331: Total: 0.274269 +331: Finished! +331: +331: STDERR: +331: Not an error +284/578 Test #331: plm-bsp-mse-p ......................... Passed 0.49 sec +test 380 + Start 380: plm-bsp-landmark-b-stats + +380: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +380: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +380: Test timeout computed to be: 1500 +376: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +376: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha +376: EXPECTED_ERRNO is 359: RETVAL: 0 359: STDOUT: MIN 0.000000 AVE 107.313034 MAX 997.000000 NONZERO 44294 NUMVOX 54872 359: 359: STDERR: 359: Not an error -285/578 Test #359: plm-bsp-ushort-stats .................. Passed 0.40 sec -test 395 - Start 395: plm-bsp-dcos-b-stats +285/578 Test #359: plm-bsp-ushort-stats .................. Passed 0.22 sec +test 383 + Start 383: plm-bsp-landmark-c-stats -395: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -395: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -395: Test timeout computed to be: 1500 -386: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -386: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha -386: EXPECTED_ERRNO is +383: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +383: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +383: Test timeout computed to be: 1500 +380: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +380: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha +380: EXPECTED_ERRNO is +352: RETVAL: 0 +352: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +352: +352: STDERR: +352: Not an error +383: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +383: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha +383: EXPECTED_ERRNO is +286/578 Test #352: plm-bsp-openmp-stats .................. Passed 0.38 sec +test 386 + Start 386: plm-bsp-landmark-d-stats + +386: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +386: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +386: Test timeout computed to be: 1500 366: RETVAL: 0 366: STDOUT: MIN -128.000000 AVE -127.132690 MAX 0.000000 NONZERO 54608 NUMVOX 54872 366: 366: STDERR: 366: Not an error -392: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -392: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd -392: EXPECTED_ERRNO is -286/578 Test #366: plm-bsp-char-output-stats ............. Passed 0.40 sec -test 398 - Start 398: plm-bsp-dcos-c-stats +386: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +386: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha +386: EXPECTED_ERRNO is +287/578 Test #366: plm-bsp-char-output-stats ............. Passed 0.17 sec +test 389 + Start 389: plm-bsp-landmark-e-stats -398: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -398: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -398: Test timeout computed to be: 1500 +389: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +389: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +389: Test timeout computed to be: 1500 +389: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +389: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha +389: EXPECTED_ERRNO is 354: RETVAL: 0 354: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 354: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -17694,19 +17876,19 @@ 354: Setting nmax, mmax = 375 21 354: >>> START 354: This problem is unconstrained. -354: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.010 s ] +354: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.004 s ] 354: CMIN 0.00 CAVG 0.00 CMAX 0.00 354: LSD 0.00 -354: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.002 s ] +354: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.003 s ] 354: CMIN -0.07 CAVG 0.01 CMAX 0.68 354: LSD 1.00 354: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.002 s ] 354: CMIN -0.35 CAVG 0.05 CMAX 3.40 354: LSD 5.00 -354: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.002 s ] +354: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.003 s ] 354: CMIN -1.48 CAVG 0.20 CMAX 14.26 354: LSD 21.00 -354: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.013 s ] +354: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.001 s ] 354: CMIN -1.74 CAVG 0.44 CMAX 32.50 354: LSD 27.95 354: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.002 s ] @@ -17741,7 +17923,7 @@ 354: [ 0, 0] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.001 s ] 354: CMIN -1.73 CAVG 0.34 CMAX 23.99 354: LSD 0.00 -354: [ 0, 1] MSE 245.572 NV 5873 GM -24.090 GN 31.6 [ 0.002 s ] +354: [ 0, 1] MSE 245.572 NV 5873 GM -24.090 GN 31.6 [ 0.001 s ] 354: CMIN -1.74 CAVG 0.33 CMAX 23.36 354: LSD 1.00 354: [ 1, 2] MSE 184.553 NV 5937 GM -53.657 GN 19.1 [ 0.002 s ] @@ -17750,10 +17932,10 @@ 354: [ 2, 3] MSE 169.679 NV 5953 GM -95.518 GN 19.6 [ 0.001 s ] 354: CMIN -2.31 CAVG 0.35 CMAX 20.63 354: LSD 2.11 -354: [ 3, 4] MSE 160.980 NV 5975 GM -14.478 GN 20.7 [ 0.014 s ] +354: [ 3, 4] MSE 160.980 NV 5975 GM -14.478 GN 20.7 [ 0.001 s ] 354: CMIN -3.42 CAVG 0.39 CMAX 17.80 354: LSD 5.62 -354: [ 4, 5] MSE 133.675 NV 5940 GM -9.965 GN 18.9 [ 0.001 s ] +354: [ 4, 5] MSE 133.675 NV 5940 GM -9.965 GN 18.9 [ 0.005 s ] 354: CMIN -3.93 CAVG 0.41 CMAX 17.38 354: LSD 2.38 354: [2] xf_out->m_type = 9, xf_in->m_type = 9 @@ -17784,33 +17966,21 @@ 354: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha 354: Saving vf... 354: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-vf.mha -354: Load: 0.0305829 -354: Run: 0.125304 -354: Save: 0.0872211 -354: Total: 0.243108 +354: Load: 0.054476 +354: Run: 0.0525069 +354: Save: 0.0499291 +354: Total: 0.156912 354: Finished! 354: 354: STDERR: 354: Not an error -389: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -389: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha -389: EXPECTED_ERRNO is -287/578 Test #354: plm-bsp-resume ........................ Passed 0.46 sec -test 401 - Start 401: plm-bsp-dcos-d-stats +288/578 Test #354: plm-bsp-resume ........................ Passed 0.43 sec +test 392 + Start 392: plm-bsp-dcos-a-stats -401: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -401: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -401: Test timeout computed to be: 1500 -401: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -401: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd -401: EXPECTED_ERRNO is -395: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -395: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd -395: EXPECTED_ERRNO is -398: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -398: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd -398: EXPECTED_ERRNO is +392: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +392: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +392: Test timeout computed to be: 1500 373: RETVAL: 0 373: STDOUT: Min: -7.802 -7.802 -7.802 373: Mean: -0.007 -0.007 -0.007 @@ -17825,205 +17995,51 @@ 373: Max second derivative at: (20 16 20) 373: 373: STDERR: +376: RETVAL: 0 +376: STDOUT: Min: -7.243 -7.243 -7.243 +376: Mean: -0.004 -0.004 -0.004 +376: Max: 7.465 7.465 7.465 +376: Mean abs: 0.231 0.231 0.231 +376: Ave len: 0.460 +376: Jacobian: MINJAC 0.443734 MAXJAC 1.03502 +376: Energy: MINDIL -0.712 MAXDIL 0.0370853 +376: MAXSTRAIN 0.0397 TOTSTRAIN 73.6175 +376: Second derivatives: MINSECDER 9.85e-12 MAXSECDER 0.0182 +376: AVESECDER 0.00018 INTSECDER 2.24e+04 +376: Max second derivative at: (20 20 16) +376: +376: STDERR: 373: Not an error -288/578 Test #373: plm-bsp-regularize-analytic-stats ..... Passed 0.43 sec -test 404 - Start 404: plm-bsp-dcos-e-stats +376: Not an error +289/578 Test #373: plm-bsp-regularize-analytic-stats ..... Passed 0.21 sec +test 395 + Start 395: plm-bsp-dcos-b-stats -404: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -404: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -404: Test timeout computed to be: 1500 -331: RETVAL: 0 -331: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -331: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -331: Launching registration worker thread -331: Inside registration worker thread -331: Doing registration stage -331: [1] xf_in->m_type = 0, xf_out->m_type = 0 -331: RESAMPLE 1 1: (2 2 2), (2 2 2) -331: RESAMPLE 1 1: (2 2 2), (2 2 2) -331: volume_calc_grad complete. -331: bspline_xform_initialize -331: rdims = (2,2,2) -331: vox_per_rgn = (11,11,11) -331: cdims = (5 5 5) -331: Algorithm flavor = p -331: Threading = 0 -331: >> Checking JH allocation -331: BSPLINE PARMS -331: max_its = 5 -331: max_feval = 5 -331: BSPLINE XFORM HEADER -331: vox_per_rgn = 11 11 11 -331: roi_offset = 0 0 0 -331: roi_dim = 19 19 19 -331: img_dc = 1 0 0 0 1 0 0 0 1 -331: BST METRICS -331: MET 110100 MSE 1.000000 -331: Setting nmax, mmax = 375 21 -331: >>> START -331: This problem is unconstrained. -331: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.030 s ] -331: CMIN 0.00 CAVG 0.00 CMAX 0.00 -331: LSD 0.00 -331: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.028 s ] -331: CMIN -0.05 CAVG 0.01 CMAX 0.68 -331: LSD 1.00 -331: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.071 s ] -331: CMIN -0.27 CAVG 0.05 CMAX 3.40 -331: LSD 5.00 -331: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.072 s ] -331: CMIN -2.31 CAVG 0.43 CMAX 26.12 -331: LSD 35.51 -331: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.032 s ] -331: CMIN -2.36 CAVG 0.35 CMAX 22.13 -331: LSD 6.00 -331: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.068 s ] -331: CMIN -2.20 CAVG 0.36 CMAX 21.85 -331: LSD 1.43 -331: [2] xf_out->m_type = 9, xf_in->m_type = 0 -331: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -331: bspline_xform_initialize -331: rdims = (2,2,2) -331: vox_per_rgn = (22,22,22) -331: cdims = (5 5 5) -331: ** Registration worker thread finished. -331: Writing transformation ... -331: Warping... -331: Running: plm_warp_native -331: Converting input image... -331: Converting xform... -331: bspline_xform_initialize -331: rdims = (2,2,2) -331: vox_per_rgn = (22,22,22) -331: cdims = (5 5 5) -331: Creating output vf... -331: Creating output volume... -331: Running native warper... -331: bspline_warp complete. -331: Back convert to original type... -331: > Convert vf to itk -331: > Conversion complete. -331: plm_warp_native is complete. -331: Saving image... -331: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha -331: Saving vf... -331: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-vf.mha -331: Load: 0.0561202 -331: Run: 0.341528 -331: Save: 0.070416 -331: Total: 0.468064 -331: Finished! -331: -331: STDERR: -331: Not an error -289/578 Test #331: plm-bsp-mse-p ......................... Passed 0.87 sec -test 407 - Start 407: plm-bsp-dcos-f-stats +395: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +395: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +395: Test timeout computed to be: 1500 +392: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +392: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd +392: EXPECTED_ERRNO is +383: RETVAL: 0 +383: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 +383: +383: STDERR: +383: Not an error +290/578 Test #376: plm-bsp-regularize-numeric-stats ...... Passed 0.20 sec +291/578 Test #383: plm-bsp-landmark-c-stats .............. Passed 0.16 sec +test 398 + Start 398: plm-bsp-dcos-c-stats -407: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -407: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -407: Test timeout computed to be: 1500 -335: RETVAL: 0 -335: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha -335: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha -335: Launching registration worker thread -335: Inside registration worker thread -335: Doing registration stage -335: [1] xf_in->m_type = 0, xf_out->m_type = 0 -335: RESAMPLE 1 1: (2 2 2), (2 2 2) -335: RESAMPLE 1 1: (2 2 2), (2 2 2) -335: volume_calc_grad complete. -335: bspline_xform_initialize -335: rdims = (2,2,2) -335: vox_per_rgn = (11,11,11) -335: cdims = (5 5 5) -335: Algorithm flavor = r -335: Threading = 0 -335: >> Checking JH allocation -335: BSPLINE PARMS -335: max_its = 5 -335: max_feval = 5 -335: BSPLINE XFORM HEADER -335: vox_per_rgn = 11 11 11 -335: roi_offset = 0 0 0 -335: roi_dim = 19 19 19 -335: img_dc = 1 0 0 0 1 0 0 0 1 -335: BST METRICS -335: MET 110100 MSE 1.000000 -335: Setting nmax, mmax = 375 21 -335: >>> START -335: This problem is unconstrained. -335: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.064 s ] -335: CMIN 0.00 CAVG 0.00 CMAX 0.00 -335: LSD 0.00 -335: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.068 s ] -335: CMIN -0.05 CAVG 0.01 CMAX 0.68 -335: LSD 1.00 -335: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.052 s ] -335: CMIN -0.27 CAVG 0.05 CMAX 3.40 -335: LSD 5.00 -335: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.056 s ] -335: CMIN -2.31 CAVG 0.43 CMAX 26.12 -335: LSD 35.51 -335: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.020 s ] -335: CMIN -2.36 CAVG 0.35 CMAX 22.13 -335: LSD 6.00 -335: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.068 s ] -335: CMIN -2.20 CAVG 0.36 CMAX 21.85 -335: LSD 1.43 -335: [2] xf_out->m_type = 9, xf_in->m_type = 0 -335: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -335: bspline_xform_initialize -335: rdims = (2,2,2) -335: vox_per_rgn = (22,22,22) -335: cdims = (5 5 5) -335: ** Registration worker thread finished. -335: Writing transformation ... -335: Warping... -335: Running: plm_warp_native -335: Converting input image... -335: Converting xform... -335: bspline_xform_initialize -335: rdims = (2,2,2) -335: vox_per_rgn = (22,22,22) -335: cdims = (5 5 5) -335: Creating output vf... -335: Creating output volume... -335: Running native warper... -335: bspline_warp complete. -335: Back convert to original type... -335: > Convert vf to itk -335: > Conversion complete. -335: plm_warp_native is complete. -335: Saving image... -335: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha -335: Saving vf... -335: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-vf.mha -335: Load: 0.098659 -335: Run: 0.353455 -335: Save: 0.0367601 -335: Total: 0.488874 -335: Finished! -335: -335: STDERR: -335: Not an error -290/578 Test #335: plm-bsp-mse-r ......................... Passed 0.85 sec -test 410 - Start 410: plm-reg-multi-a-stats +398: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +398: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +398: Test timeout computed to be: 1500 +test 401 + Start 401: plm-bsp-dcos-d-stats -410: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -410: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -410: Test timeout computed to be: 1500 -404: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -404: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd -404: EXPECTED_ERRNO is -410: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -410: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd -410: EXPECTED_ERRNO is -407: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -407: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd -407: EXPECTED_ERRNO is +401: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +401: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +401: Test timeout computed to be: 1500 370: RETVAL: 0 370: STDOUT: Min: -9.485 -9.485 -9.485 370: Mean: -0.004 -0.004 -0.004 @@ -18039,13 +18055,6 @@ 370: 370: STDERR: 370: Not an error -291/578 Test #370: plm-bsp-regularize-none-stats ......... Passed 0.57 sec -test 413 - Start 413: plm-reg-multi-b-stats - -413: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -413: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -413: Test timeout computed to be: 1500 349: RETVAL: 0 349: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 349: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha @@ -18086,22 +18095,22 @@ 349: Setting nmax, mmax = 375 21 349: >>> START 349: This problem is unconstrained. -349: [ 0, 0] SCORE -23.086 NV 6859 GM 11.933 GN 2.8 [ 0.013 s ] +349: [ 0, 0] SCORE -23.086 NV 6859 GM 11.933 GN 2.8 [ 0.010 s ] 349: GM 172.276 MI -0.4031359 CMIN 0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.00 -349: [ 0, 1] SCORE -21.366 NV 6859 GM -20.848 GN 4.05 [ 0.014 s ] +349: [ 0, 1] SCORE -21.366 NV 6859 GM -20.848 GN 4.05 [ 0.013 s ] 349: GM 172.158 MI -0.3858200 CMIN -0.49 CAVG -0.00 CMAX 0.08 349: LSD 1.00 -349: [ 0, 2] SCORE -22.915 NV 6859 GM -12.881 GN 2.54 [ 0.013 s ] +349: [ 0, 2] SCORE -22.915 NV 6859 GM -12.881 GN 2.54 [ 0.008 s ] 349: GM 172.298 MI -0.4014443 CMIN -0.08 CAVG 0.01 CMAX 0.02 349: LSD 0.18 -349: [ 0, 3] SCORE -23.222 NV 6859 GM -1.121 GN 1.07 [ 0.018 s ] +349: [ 0, 3] SCORE -23.222 NV 6859 GM -1.121 GN 1.07 [ 0.014 s ] 349: GM 172.313 MI -0.4045370 CMIN -0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.05 -349: [ 1, 4] SCORE -23.229 NV 6859 GM 16.621 GN 3.63 [ 0.017 s ] +349: [ 1, 4] SCORE -23.229 NV 6859 GM 16.621 GN 3.63 [ 0.005 s ] 349: GM 172.348 MI -0.4046354 CMIN -0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.01 -349: [ 2, 5] SCORE -22.889 NV 6859 GM -16.998 GN 4.96 [ 0.020 s ] +349: [ 2, 5] SCORE -22.889 NV 6859 GM -16.998 GN 4.96 [ 0.017 s ] 349: GM 172.750 MI -0.4016393 CMIN -0.14 CAVG 0.01 CMAX 0.04 349: LSD 0.20 349: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -18132,39 +18141,73 @@ 349: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha 349: Saving vf... 349: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-vf.mha -349: Load: 0.16415 -349: Run: 0.135865 -349: Save: 0.054945 -349: Total: 0.35496 +349: Load: 0.022562 +349: Run: 0.0773568 +349: Save: 0.0588002 +349: Total: 0.158719 349: Finished! 349: 349: STDERR: 349: Not an error -292/578 Test #349: plm-bsp-sm-multi-a .................... Passed 0.78 sec -test 416 - Start 416: plm-reg-dv-itk-translation-stats +292/578 Test #349: plm-bsp-sm-multi-a .................... Passed 0.53 sec +293/578 Test #370: plm-bsp-regularize-none-stats ......... Passed 0.25 sec +test 404 + Start 404: plm-bsp-dcos-e-stats -416: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -416: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -416: Test timeout computed to be: 1500 -416: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -416: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd -416: EXPECTED_ERRNO is +404: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +404: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +404: Test timeout computed to be: 1500 +test 407 + Start 407: plm-bsp-dcos-f-stats + +407: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +407: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +407: Test timeout computed to be: 1500 +395: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +395: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd +395: EXPECTED_ERRNO is +362: RETVAL: 0 +362: STDOUT: MIN 0.000000 AVE 108.147682 MAX 998.045227 NONZERO 46833 NUMVOX 54872 +362: +362: STDERR: +362: Not an error +398: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +398: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd +398: EXPECTED_ERRNO is +404: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +404: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd +404: EXPECTED_ERRNO is +294/578 Test #362: plm-bsp-double-stats .................. Passed 0.32 sec +test 410 + Start 410: plm-reg-multi-a-stats + +410: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +410: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +410: Test timeout computed to be: 1500 +407: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +407: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd +407: EXPECTED_ERRNO is +401: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +401: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd +401: EXPECTED_ERRNO is +386: RETVAL: 0 +386: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 +386: +386: STDERR: +386: Not an error +295/578 Test #386: plm-bsp-landmark-d-stats .............. Passed 0.18 sec +test 413 + Start 413: plm-reg-multi-b-stats + +413: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +413: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +413: Test timeout computed to be: 1500 +410: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +410: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd +410: EXPECTED_ERRNO is 413: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 413: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd 413: EXPECTED_ERRNO is -383: RETVAL: 0 -383: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 -383: -383: STDERR: -383: Not an error -293/578 Test #383: plm-bsp-landmark-c-stats .............. Passed 0.47 sec -test 425 - Start 425: plm-reg-process-a-stats - -425: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -425: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -425: Test timeout computed to be: 1500 356: RETVAL: 0 356: STDOUT: Plastimatch 1.10.0 356: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha @@ -18196,22 +18239,22 @@ 356: Setting nmax, mmax = 375 21 356: >>> START 356: This problem is unconstrained. -356: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.051 s ] +356: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.050 s ] 356: CMIN 0.00 CAVG 0.00 CMAX 0.00 356: LSD 0.00 -356: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.064 s ] +356: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.036 s ] 356: CMIN -0.07 CAVG 0.01 CMAX 0.68 356: LSD 1.00 -356: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.060 s ] +356: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.032 s ] 356: CMIN -0.35 CAVG 0.05 CMAX 3.40 356: LSD 5.00 -356: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.060 s ] +356: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.040 s ] 356: CMIN -1.48 CAVG 0.20 CMAX 14.26 356: LSD 21.00 -356: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.048 s ] +356: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.021 s ] 356: CMIN -1.74 CAVG 0.44 CMAX 32.50 356: LSD 27.95 -356: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.044 s ] +356: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.031 s ] 356: CMIN -1.73 CAVG 0.34 CMAX 23.99 356: LSD 13.11 356: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -18243,178 +18286,175 @@ 356: Saving vf... 356: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-vf.nrrd 356: Plastimatch 1.10.0 -356: Load: 0.0760849 -356: Run: 0.339743 -356: Save: 0.162954 -356: Total: 0.578782 +356: Load: 0.0177081 +356: Run: 0.230042 +356: Save: 0.105052 +356: Total: 0.352802 356: Finished! 356: 356: STDERR: 356: Not an error -294/578 Test #356: plm-bsp-logfile ....................... Passed 0.78 sec -test 428 - Start 428: plm-reg-trans-a-stats +296/578 Test #356: plm-bsp-logfile ....................... Passed 0.51 sec +test 416 + Start 416: plm-reg-dv-itk-translation-stats -428: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -428: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -428: Test timeout computed to be: 1500 -425: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -425: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha -425: EXPECTED_ERRNO is -428: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -428: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha -428: EXPECTED_ERRNO is +416: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +416: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +416: Test timeout computed to be: 1500 380: RETVAL: 0 380: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 380: 380: STDERR: 380: Not an error -376: RETVAL: 0 -376: STDOUT: Min: -7.243 -7.243 -7.243 -376: Mean: -0.004 -0.004 -0.004 -376: Max: 7.465 7.465 7.465 -376: Mean abs: 0.231 0.231 0.231 -376: Ave len: 0.460 -376: Jacobian: MINJAC 0.443734 MAXJAC 1.03502 -376: Energy: MINDIL -0.712 MAXDIL 0.0370853 -376: MAXSTRAIN 0.0397 TOTSTRAIN 73.6175 -376: Second derivatives: MINSECDER 9.85e-12 MAXSECDER 0.0182 -376: AVESECDER 0.00018 INTSECDER 2.24e+04 -376: Max second derivative at: (20 20 16) -376: -376: STDERR: -376: Not an error -295/578 Test #380: plm-bsp-landmark-b-stats .............. Passed 0.58 sec +297/578 Test #380: plm-bsp-landmark-b-stats .............. Passed 0.29 sec +test 425 + Start 425: plm-reg-process-a-stats + +425: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +425: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +425: Test timeout computed to be: 1500 +416: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +416: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd +416: EXPECTED_ERRNO is +425: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +425: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha +425: EXPECTED_ERRNO is +404: RETVAL: 0 +404: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 +404: +404: STDERR: +404: Not an error +392: RETVAL: 0 +392: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 +392: +392: STDERR: +392: Not an error +298/578 Test #392: plm-bsp-dcos-a-stats .................. Passed 0.17 sec +test 428 + Start 428: plm-reg-trans-a-stats + +428: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +428: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +428: Test timeout computed to be: 1500 +299/578 Test #404: plm-bsp-dcos-e-stats .................. Passed 0.14 sec test 431 Start 431: plm-reg-trans-b-stats 431: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 431: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 431: Test timeout computed to be: 1500 -296/578 Test #376: plm-bsp-regularize-numeric-stats ...... Passed 0.61 sec +428: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +428: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha +428: EXPECTED_ERRNO is +389: RETVAL: 0 +389: STDOUT: MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872 +398: RETVAL: 0 +398: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 +398: +398: STDERR: +389: +389: STDERR: +398: Not an error +389: Not an error +407: RETVAL: 0 +407: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 +407: +407: STDERR: +300/578 Test #389: plm-bsp-landmark-e-stats .............. Passed 0.29 sec +407: Not an error test 434 Start 434: plm-reg-trans-mi-a-stats 434: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-mi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 434: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 434: Test timeout computed to be: 1500 -434: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -434: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha -434: EXPECTED_ERRNO is -401: RETVAL: 0 -401: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 -401: -401: STDERR: -401: Not an error -297/578 Test #401: plm-bsp-dcos-d-stats .................. Passed 0.40 sec +301/578 Test #398: plm-bsp-dcos-c-stats .................. Passed 0.18 sec +302/578 Test #407: plm-bsp-dcos-f-stats .................. Passed 0.17 sec test 437 Start 437: plm-reg-autores-a-stats 437: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 437: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 437: Test timeout computed to be: 1500 -386: RETVAL: 0 -386: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 -386: -386: STDERR: -386: Not an error -431: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -431: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha -431: EXPECTED_ERRNO is -410: RETVAL: 0 -410: STDOUT: Min: -20.189 -0.190 -0.190 -410: Mean: -20.000 -0.000 -0.000 -410: Max: -19.810 0.190 0.190 -410: Mean abs: 20.000 0.000 0.000 -410: Ave len: 20.000 -410: Jacobian: MINJAC 0.978516 MAXJAC 1.02157 -410: Energy: MINDIL -0.0216 MAXDIL 0.0215666 -410: MAXSTRAIN 0.0221 TOTSTRAIN 0.0501571 -410: Second derivatives: MINSECDER 0 MAXSECDER 0.00749 -410: AVESECDER 1.12e-05 INTSECDER 1.4e+03 -410: Max second derivative at: (18 20 16) -410: -410: STDERR: -410: Not an error -298/578 Test #386: plm-bsp-landmark-d-stats .............. Passed 0.51 sec test 440 Start 440: plm-reg-autores-b-stats 440: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 440: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 440: Test timeout computed to be: 1500 -437: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -437: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha -437: EXPECTED_ERRNO is -299/578 Test #410: plm-reg-multi-a-stats ................. Passed 0.22 sec +431: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +431: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha +431: EXPECTED_ERRNO is +395: RETVAL: 0 +395: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 +395: +395: STDERR: +395: Not an error +434: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +434: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha +434: EXPECTED_ERRNO is +303/578 Test #395: plm-bsp-dcos-b-stats .................. Passed 0.20 sec test 446 Start 446: plm-compose-a-stats 446: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 446: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 446: Test timeout computed to be: 1500 -395: RETVAL: 0 -395: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 -395: -395: STDERR: -395: Not an error -389: RETVAL: 0 -389: STDOUT: MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872 -389: -389: STDERR: -300/578 Test #395: plm-bsp-dcos-b-stats .................. Passed 0.48 sec +413: RETVAL: 0 +413: STDOUT: MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872 +413: +413: STDERR: +413: Not an error +304/578 Test #413: plm-reg-multi-b-stats ................. Passed 0.16 sec test 450 Start 450: plm-compose-b-stats 450: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 450: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 450: Test timeout computed to be: 1500 -389: Not an error -392: RETVAL: 0 -392: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 -392: -392: STDERR: -392: Not an error -301/578 Test #389: plm-bsp-landmark-e-stats .............. Passed 0.52 sec -302/578 Test #392: plm-bsp-dcos-a-stats .................. Passed 0.51 sec +410: RETVAL: 0 +410: STDOUT: Min: -20.189 -0.190 -0.190 +410: Mean: -20.000 -0.000 -0.000 +410: Max: -19.810 0.190 0.190 +410: Mean abs: 20.000 0.000 0.000 +410: Ave len: 20.000 +410: Jacobian: MINJAC 0.978516 MAXJAC 1.02157 +410: Energy: MINDIL -0.0216 MAXDIL 0.0215666 +410: MAXSTRAIN 0.0221 TOTSTRAIN 0.0501571 +410: Second derivatives: MINSECDER 0 MAXSECDER 0.00749 +410: AVESECDER 1.12e-05 INTSECDER 1.4e+03 +410: Max second derivative at: (18 20 16) +410: +410: STDERR: +410: Not an error +305/578 Test #410: plm-reg-multi-a-stats ................. Passed 0.18 sec test 454 Start 454: plm-compose-c-stats 454: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 454: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 454: Test timeout computed to be: 1500 +440: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +440: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha +440: EXPECTED_ERRNO is +437: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +437: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha +437: EXPECTED_ERRNO is +401: RETVAL: 0 +401: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 +401: +401: STDERR: +401: Not an error +306/578 Test #401: plm-bsp-dcos-d-stats .................. Passed 0.22 sec test 457 Start 457: plm-resample-a-stats 457: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 457: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 457: Test timeout computed to be: 1500 -440: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -440: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha -440: EXPECTED_ERRNO is -413: RETVAL: 0 -413: STDOUT: MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872 -413: -413: STDERR: -413: Not an error 446: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 446: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha 446: EXPECTED_ERRNO is -450: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -450: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha -450: EXPECTED_ERRNO is -303/578 Test #413: plm-reg-multi-b-stats ................. Passed 0.22 sec -test 460 - Start 460: plm-resample-b-stats - -460: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -460: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -460: Test timeout computed to be: 1500 -398: RETVAL: 0 -398: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 -398: -398: STDERR: -398: Not an error 368: RETVAL: 0 368: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 368: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha @@ -18448,22 +18488,22 @@ 368: Setting nmax, mmax = 1536 41 368: >>> START 368: This problem is unconstrained. -368: [ 0, 0] MSE 1339.481 NV 6859 GM 84.834 GN 23.1 [ 0.059 s ] +368: [ 0, 0] MSE 1339.481 NV 6859 GM 84.834 GN 23.1 [ 0.054 s ] 368: CMIN 0.00 CAVG 0.00 CMAX 0.00 368: LSD 0.00 -368: [ 0, 1] MSE 1311.345 NV 6859 GM 83.820 GN 22.8 [ 0.052 s ] +368: [ 0, 1] MSE 1311.345 NV 6859 GM 83.820 GN 22.8 [ 0.036 s ] 368: CMIN -0.60 CAVG -0.00 CMAX 0.08 368: LSD 1.00 -368: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.024 s ] +368: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.015 s ] 368: CMIN -2.99 CAVG -0.01 CMAX 0.42 368: LSD 5.00 -368: [ 0, 3] MSE 827.300 NV 6859 GM 63.686 GN 17.5 [ 0.028 s ] +368: [ 0, 3] MSE 827.300 NV 6859 GM 63.686 GN 17.5 [ 0.033 s ] 368: CMIN -12.56 CAVG -0.05 CMAX 1.74 368: LSD 21.00 -368: [ 1, 4] MSE 213.043 NV 6859 GM -16.873 GN 5.84 [ 0.016 s ] +368: [ 1, 4] MSE 213.043 NV 6859 GM -16.873 GN 5.84 [ 0.030 s ] 368: CMIN -54.37 CAVG -0.20 CMAX 6.52 368: LSD 67.10 -368: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.036 s ] +368: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.017 s ] 368: CMIN -51.91 CAVG -0.18 CMAX 5.91 368: LSD 13.48 368: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -18494,85 +18534,102 @@ 368: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-img.mha 368: Saving vf... 368: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd -368: Load: 0.101793 -368: Run: 0.221569 -368: Save: 0.118868 -368: Total: 0.44223 +368: Load: 0.0821071 +368: Run: 0.196437 +368: Save: 0.0646019 +368: Total: 0.343146 368: Finished! +454: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +454: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha +454: EXPECTED_ERRNO is 368: 368: STDERR: 368: Not an error -404: RETVAL: 0 -404: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 -404: -404: STDERR: -404: Not an error -304/578 Test #368: plm-bsp-rect .......................... Passed 0.82 sec -305/578 Test #398: plm-bsp-dcos-c-stats .................. Passed 0.49 sec -306/578 Test #404: plm-bsp-dcos-e-stats .................. Passed 0.31 sec +307/578 Test #368: plm-bsp-rect .......................... Passed 0.51 sec +test 460 + Start 460: plm-resample-b-stats + +460: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +460: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +460: Test timeout computed to be: 1500 +450: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +450: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha +450: EXPECTED_ERRNO is +457: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +457: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha +457: EXPECTED_ERRNO is +460: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +460: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha +460: EXPECTED_ERRNO is +425: RETVAL: 0 +425: STDOUT: MIN -500.000000 AVE -490.647552 MAX 0.000000 NONZERO 54871 NUMVOX 54872 +425: +425: STDERR: +425: Not an error +416: RETVAL: 0 +416: STDOUT: MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872 +416: +416: STDERR: +416: Not an error +308/578 Test #425: plm-reg-process-a-stats ............... Passed 0.16 sec test 463 Start 463: plm-resample-c-stats 463: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 463: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 463: Test timeout computed to be: 1500 +309/578 Test #416: plm-reg-dv-itk-translation-stats ...... Passed 0.17 sec test 466 Start 466: plm-scale-a-stats 466: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 466: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 466: Test timeout computed to be: 1500 +428: RETVAL: 0 +428: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 +428: +428: STDERR: +428: Not an error +310/578 Test #428: plm-reg-trans-a-stats ................. Passed 0.14 sec test 469 Start 469: plm-scale-vf-a-stats 469: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 469: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 469: Test timeout computed to be: 1500 -454: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -454: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha -454: EXPECTED_ERRNO is -457: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -457: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha -457: EXPECTED_ERRNO is -416: RETVAL: 0 -416: STDOUT: MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872 -416: -416: STDERR: -416: Not an error -307/578 Test #416: plm-reg-dv-itk-translation-stats ...... Passed 0.26 sec -test 471 - Start 471: plm-sift-a - -471: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-sift-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=sift;--output-ps-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-1.fcsv;--output-ps-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-2.fcsv;--output-match-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv;--output-match-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -471: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -471: Test timeout computed to be: 1500 463: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 463: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha 463: EXPECTED_ERRNO is -460: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -460: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha -460: EXPECTED_ERRNO is 466: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 466: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd 466: EXPECTED_ERRNO is -428: RETVAL: 0 -428: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 -428: -428: STDERR: -428: Not an error +431: RETVAL: 0 +431: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 +431: +431: STDERR: +431: Not an error +311/578 Test #431: plm-reg-trans-b-stats ................. Passed 0.14 sec +test 471 + Start 471: plm-sift-a + +471: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-sift-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=sift;--output-ps-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-1.fcsv;--output-ps-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-2.fcsv;--output-match-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv;--output-match-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +471: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +471: Test timeout computed to be: 1500 469: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 469: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd 469: EXPECTED_ERRNO is -308/578 Test #428: plm-reg-trans-a-stats ................. Passed 0.20 sec +437: RETVAL: 0 +437: STDOUT: MIN -999.770874 AVE -597.535889 MAX 0.000000 NONZERO 38880 NUMVOX 54872 +437: +437: STDERR: +437: Not an error +312/578 Test #437: plm-reg-autores-a-stats ............... Passed 0.13 sec test 475 Start 475: plm-thumbnail-a-stats 475: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 475: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 475: Test timeout computed to be: 1500 -475: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -475: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png -475: EXPECTED_ERRNO is 471: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 471: PARMS is sift;--output-ps-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-1.fcsv;--output-ps-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-2.fcsv;--output-match-1;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv;--output-match-2;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha 471: EXPECTED_ERRNO is @@ -18581,104 +18638,124 @@ 434: 434: STDERR: 434: Not an error -309/578 Test #434: plm-reg-trans-mi-a-stats .............. Passed 0.19 sec +313/578 Test #434: plm-reg-trans-mi-a-stats .............. Passed 0.15 sec test 478 Start 478: plm-thumbnail-b-stats 478: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 478: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 478: Test timeout computed to be: 1500 -425: RETVAL: 0 -425: STDOUT: MIN -500.000000 AVE -490.647552 MAX 0.000000 NONZERO 54871 NUMVOX 54872 -425: -425: STDERR: -425: Not an error -310/578 Test #425: plm-reg-process-a-stats ............... Passed 0.28 sec +454: RETVAL: 0 +454: STDOUT: Min: 0.000 -2.171 -2.171 +454: Mean: 12.523 -0.008 -0.008 +454: Max: 21.615 1.811 1.811 +454: Mean abs: 12.523 0.418 0.418 +454: Ave len: 12.552 +454: Jacobian: MINJAC -6.97561 MAXJAC 1.2529 +454: Energy: MINDIL -6.7 MAXDIL 0.315048 +454: MAXSTRAIN 47 TOTSTRAIN 30590.5 +454: Second derivatives: MINSECDER 0 MAXSECDER 1.27e+03 +454: AVESECDER 7.37 INTSECDER 9.21e+05 +454: Max second derivative at: (30 20 27) +454: +454: STDERR: +454: Not an error +446: RETVAL: 0 +446: STDOUT: Min: 0.000 -1.573 -1.573 +446: Mean: 13.794 -0.035 -0.034 +446: Max: 20.615 1.329 1.329 +446: Mean abs: 13.794 0.281 0.281 +446: Ave len: 13.805 +446: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 +446: Energy: MINDIL -6.41 MAXDIL 0.0798482 +446: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 +446: Second derivatives: MINSECDER 0 MAXSECDER 165 +446: AVESECDER 6.5 INTSECDER 8.13e+05 +446: Max second derivative at: (30 18 18) +446: +446: STDERR: +446: Not an error +440: RETVAL: 0 +440: STDOUT: MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872 +440: +440: STDERR: +440: Not an error +314/578 Test #454: plm-compose-c-stats ................... Passed 0.12 sec test 481 Start 481: plm-thumbnail-c-stats 481: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 481: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 481: Test timeout computed to be: 1500 -407: RETVAL: 0 -407: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 -407: -407: STDERR: -407: Not an error -311/578 Test #407: plm-bsp-dcos-f-stats .................. Passed 0.41 sec +475: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +475: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png +475: EXPECTED_ERRNO is +315/578 Test #440: plm-reg-autores-b-stats ............... Passed 0.14 sec +316/578 Test #446: plm-compose-a-stats ................... Passed 0.14 sec test 484 Start 484: plm-intersect-stats 484: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-intersect-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 484: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 484: Test timeout computed to be: 1500 -478: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -478: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png -478: EXPECTED_ERRNO is -481: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -481: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png -481: EXPECTED_ERRNO is -431: RETVAL: 0 -431: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 -431: -431: STDERR: -431: Not an error -484: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -484: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha -484: EXPECTED_ERRNO is -312/578 Test #431: plm-reg-trans-b-stats ................. Passed 0.26 sec test 487 Start 487: plm-union-stats 487: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-union-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 487: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 487: Test timeout computed to be: 1500 -437: RETVAL: 0 -437: STDOUT: MIN -999.770874 AVE -597.535889 MAX 0.000000 NONZERO 38880 NUMVOX 54872 -437: -437: STDERR: -437: Not an error -313/578 Test #437: plm-reg-autores-a-stats ............... Passed 0.26 sec +460: RETVAL: 0 +460: STDOUT: MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000 +460: +460: STDERR: +460: Not an error +450: RETVAL: 0 +450: STDOUT: Min: 0.000 -1.573 -1.573 +450: Mean: 13.794 -0.035 -0.034 +450: Max: 20.615 1.329 1.329 +450: Mean abs: 13.794 0.281 0.281 +450: Ave len: 13.805 +450: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 +450: Energy: MINDIL -6.41 MAXDIL 0.0798482 +450: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 +450: Second derivatives: MINSECDER 0 MAXSECDER 165 +450: AVESECDER 6.5 INTSECDER 8.13e+05 +450: Max second derivative at: (30 18 18) +450: +450: STDERR: +450: Not an error +478: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +478: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png +478: EXPECTED_ERRNO is +317/578 Test #450: plm-compose-b-stats ................... Passed 0.14 sec +318/578 Test #460: plm-resample-b-stats .................. Passed 0.11 sec test 490 Start 490: plm-threshold-a-stats 490: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 490: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 490: Test timeout computed to be: 1500 -487: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -487: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha -487: EXPECTED_ERRNO is -446: RETVAL: 0 -446: STDOUT: Min: 0.000 -1.573 -1.573 -446: Mean: 13.794 -0.035 -0.034 -446: Max: 20.615 1.329 1.329 -446: Mean abs: 13.794 0.281 0.281 -446: Ave len: 13.805 -446: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 -446: Energy: MINDIL -6.41 MAXDIL 0.0798482 -446: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 -446: Second derivatives: MINSECDER 0 MAXSECDER 165 -446: AVESECDER 6.5 INTSECDER 8.13e+05 -446: Max second derivative at: (30 18 18) -446: -446: STDERR: -446: Not an error -314/578 Test #446: plm-compose-a-stats ................... Passed 0.24 sec test 493 Start 493: plm-threshold-b-stats 493: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 493: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 493: Test timeout computed to be: 1500 -440: RETVAL: 0 -440: STDOUT: MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872 -440: -440: STDERR: -490: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -490: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha -490: EXPECTED_ERRNO is -440: Not an error -315/578 Test #440: plm-reg-autores-b-stats ............... Passed 0.27 sec +481: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +481: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png +481: EXPECTED_ERRNO is +484: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +484: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha +484: EXPECTED_ERRNO is +457: RETVAL: 0 +457: STDOUT: MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859 +457: +457: STDERR: +457: Not an error +487: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +487: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha +487: EXPECTED_ERRNO is +319/578 Test #457: plm-resample-a-stats .................. Passed 0.13 sec test 496 Start 496: plm-threshold-c-stats @@ -18688,18 +18765,9 @@ 493: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 493: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha 493: EXPECTED_ERRNO is -457: RETVAL: 0 -457: STDOUT: MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859 -457: -457: STDERR: -457: Not an error -316/578 Test #457: plm-resample-a-stats .................. Passed 0.26 sec -test 502 - Start 502: plm-warp-a-stats - -502: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -502: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -502: Test timeout computed to be: 1500 +490: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +490: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha +490: EXPECTED_ERRNO is 496: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 496: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha 496: EXPECTED_ERRNO is @@ -18708,31 +18776,13 @@ 466: 466: STDERR: 466: Not an error -317/578 Test #466: plm-scale-a-stats ..................... Passed 0.25 sec -test 505 - Start 505: plm-warp-b-stats-1 +320/578 Test #466: plm-scale-a-stats ..................... Passed 0.12 sec +test 502 + Start 502: plm-warp-a-stats -505: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -505: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -505: Test timeout computed to be: 1500 -450: RETVAL: 0 -450: STDOUT: Min: 0.000 -1.573 -1.573 -450: Mean: 13.794 -0.035 -0.034 -450: Max: 20.615 1.329 1.329 -450: Mean abs: 13.794 0.281 0.281 -450: Ave len: 13.805 -450: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 -450: Energy: MINDIL -6.41 MAXDIL 0.0798482 -450: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 -450: Second derivatives: MINSECDER 0 MAXSECDER 165 -450: AVESECDER 6.5 INTSECDER 8.13e+05 -450: Max second derivative at: (30 18 18) -450: -450: STDERR: -450: Not an error -502: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -502: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha -502: EXPECTED_ERRNO is +502: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +502: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +502: Test timeout computed to be: 1500 463: RETVAL: 0 463: STDOUT: Min: 1.219 -2.075 -2.075 463: Mean: 6.707 -0.405 -0.405 @@ -18748,20 +18798,13 @@ 463: 463: STDERR: 463: Not an error -318/578 Test #450: plm-compose-b-stats ................... Passed 0.30 sec -319/578 Test #463: plm-resample-c-stats .................. Passed 0.27 sec -test 507 - Start 507: plm-warp-b-stats-2 - -507: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -507: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -507: Test timeout computed to be: 1500 -test 510 - Start 510: plm-warp-c-stats +321/578 Test #463: plm-resample-c-stats .................. Passed 0.13 sec +test 505 + Start 505: plm-warp-b-stats-1 -510: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -510: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -510: Test timeout computed to be: 1500 +505: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +505: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +505: Test timeout computed to be: 1500 469: RETVAL: 0 469: STDOUT: Min: 4.000 0.000 0.000 469: Mean: 4.000 0.000 0.000 @@ -18777,149 +18820,157 @@ 469: 469: STDERR: 469: Not an error -320/578 Test #469: plm-scale-vf-a-stats .................. Passed 0.27 sec -test 513 - Start 513: plm-warp-d-stats +322/578 Test #469: plm-scale-vf-a-stats .................. Passed 0.12 sec +test 507 + Start 507: plm-warp-b-stats-2 -513: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -513: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -513: Test timeout computed to be: 1500 +507: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +507: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +507: Test timeout computed to be: 1500 +502: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +502: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha +502: EXPECTED_ERRNO is +475: RETVAL: 0 +475: STDOUT: MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256 +475: +475: STDERR: +475: Not an error 505: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 505: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha 505: EXPECTED_ERRNO is +323/578 Test #475: plm-thumbnail-a-stats ................. Passed 0.12 sec 507: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 507: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha 507: EXPECTED_ERRNO is -513: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -513: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha -513: EXPECTED_ERRNO is -475: RETVAL: 0 -475: STDOUT: MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256 -475: -475: STDERR: -475: Not an error -460: RETVAL: 0 -460: STDOUT: MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000 -460: -460: STDERR: -460: Not an error -321/578 Test #460: plm-resample-b-stats .................. Passed 0.33 sec -322/578 Test #475: plm-thumbnail-a-stats ................. Passed 0.27 sec +test 510 + Start 510: plm-warp-c-stats + +510: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +510: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +510: Test timeout computed to be: 1500 +481: RETVAL: 0 +481: STDOUT: MIN 0.000000 AVE 8.203125 MAX 119.000000 NONZERO 32 NUMVOX 256 +481: +481: STDERR: +481: Not an error +487: RETVAL: 0 +487: STDOUT: MIN 0.000000 AVE 0.023163 MAX 1.000000 NONZERO 1271 NUMVOX 54872 +487: +487: STDERR: +487: Not an error +324/578 Test #481: plm-thumbnail-c-stats ................. Passed 0.12 sec +test 513 + Start 513: plm-warp-d-stats + +513: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +513: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +513: Test timeout computed to be: 1500 +325/578 Test #487: plm-union-stats ....................... Passed 0.11 sec test 516 Start 516: plm-warp-f-stats-1 516: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-f-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-warp-f-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 516: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 516: Test timeout computed to be: 1500 +493: RETVAL: 0 +493: STDOUT: MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872 +493: +493: STDERR: +493: Not an error +478: RETVAL: 0 +326/578 Test #493: plm-threshold-b-stats ................. Passed 0.11 sec test 519 Start 519: plm-warp-g-stats-1 519: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-g-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 519: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 519: Test timeout computed to be: 1500 +478: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256 +478: +478: STDERR: +478: Not an error 510: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 510: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha 510: EXPECTED_ERRNO is -481: RETVAL: 0 -481: STDOUT: MIN 0.000000 AVE 8.203125 MAX 119.000000 NONZERO 32 NUMVOX 256 -481: -481: STDERR: -481: Not an error -323/578 Test #481: plm-thumbnail-c-stats ................. Passed 0.24 sec +490: RETVAL: 0 +490: STDOUT: MIN 0.000000 AVE 0.306732 MAX 1.000000 NONZERO 16831 NUMVOX 54872 +490: +490: STDERR: +490: Not an error +327/578 Test #478: plm-thumbnail-b-stats ................. Passed 0.14 sec test 522 Start 522: plm-warp-h-stats-1 522: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-h-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;plm-warp-h-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 522: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 522: Test timeout computed to be: 1500 -478: RETVAL: 0 -478: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256 -478: -478: STDERR: -519: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -519: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd -519: EXPECTED_ERRNO is -478: Not an error -516: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -516: PARMS is header;plm-warp-f-img.nrrd -516: EXPECTED_ERRNO is -324/578 Test #478: plm-thumbnail-b-stats ................. Passed 0.27 sec +328/578 Test #490: plm-threshold-a-stats ................. Passed 0.12 sec +496: RETVAL: 0 +496: STDOUT: MIN 0.000000 AVE 0.021978 MAX 1.000000 NONZERO 1206 NUMVOX 54872 +496: +496: STDERR: test 525 Start 525: plm-warp-i-stats-1 525: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-i-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;plm-warp-i-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 525: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 525: Test timeout computed to be: 1500 -522: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -522: PARMS is stats;plm-warp-h-img.nrrd -522: EXPECTED_ERRNO is -454: RETVAL: 0 -454: STDOUT: Min: 0.000 -2.171 -2.171 -454: Mean: 12.523 -0.008 -0.008 -454: Max: 21.615 1.811 1.811 -454: Mean abs: 12.523 0.418 0.418 -454: Ave len: 12.552 -454: Jacobian: MINJAC -6.97561 MAXJAC 1.2529 -454: Energy: MINDIL -6.7 MAXDIL 0.315048 -454: MAXSTRAIN 47 TOTSTRAIN 30590.5 -454: Second derivatives: MINSECDER 0 MAXSECDER 1.27e+03 -454: AVESECDER 7.37 INTSECDER 9.21e+05 -454: Max second derivative at: (30 20 27) -454: -454: STDERR: -454: Not an error -325/578 Test #454: plm-compose-c-stats ................... Passed 0.42 sec +496: Not an error +513: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +513: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha +513: EXPECTED_ERRNO is +484: RETVAL: 0 +484: STDOUT: MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872 +484: +484: STDERR: +484: Not an error +516: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +516: PARMS is header;plm-warp-f-img.nrrd +516: EXPECTED_ERRNO is +329/578 Test #496: plm-threshold-c-stats ................. Passed 0.12 sec test 528 Start 528: plm-xf-convert-b 528: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output-type;bspline;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;--grid-spacing;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 528: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 528: Test timeout computed to be: 1500 -525: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -525: PARMS is stats;plm-warp-i-img.nrrd -525: EXPECTED_ERRNO is -528: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -528: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output-type;bspline;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;--grid-spacing;10 10 10 -528: EXPECTED_ERRNO is -484: RETVAL: 0 -484: STDOUT: MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872 -484: -484: STDERR: -484: Not an error -326/578 Test #484: plm-intersect-stats ................... Passed 0.32 sec +330/578 Test #484: plm-intersect-stats ................... Passed 0.14 sec test 532 Start 532: plm-xf-convert-d-warp-1-stats 532: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 532: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 532: Test timeout computed to be: 1500 -490: RETVAL: 0 -490: STDOUT: MIN 0.000000 AVE 0.306732 MAX 1.000000 NONZERO 16831 NUMVOX 54872 -490: -490: STDERR: -490: Not an error -487: RETVAL: 0 -487: STDOUT: MIN 0.000000 AVE 0.023163 MAX 1.000000 NONZERO 1271 NUMVOX 54872 -487: -487: STDERR: -487: Not an error -327/578 Test #490: plm-threshold-a-stats ................. Passed 0.27 sec -test 535 - Start 535: plm-xf-convert-d-warp-2-stats - -535: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -535: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -535: Test timeout computed to be: 1500 -328/578 Test #487: plm-union-stats ....................... Passed 0.30 sec -test 541 - Start 541: plm-xf-convert-h-stats - -541: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -541: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -541: Test timeout computed to be: 1500 +519: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +519: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd +519: EXPECTED_ERRNO is +522: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +522: PARMS is stats;plm-warp-h-img.nrrd +522: EXPECTED_ERRNO is +525: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +525: PARMS is stats;plm-warp-i-img.nrrd +525: EXPECTED_ERRNO is +528: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +528: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output-type;bspline;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;--grid-spacing;10 10 10 +528: EXPECTED_ERRNO is 532: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 532: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd 532: EXPECTED_ERRNO is +505: RETVAL: 0 +505: STDOUT: Min: 0.875 -1.519 -1.519 +505: Mean: 5.773 0.002 0.002 +505: Max: 12.239 1.255 1.255 +505: Mean abs: 5.773 0.518 0.518 +505: Ave len: 5.853 +505: Jacobian: MINJAC 0.815198 MAXJAC 1.18104 +505: Energy: MINDIL -0.184 MAXDIL 0.216011 +505: MAXSTRAIN 0.267 TOTSTRAIN 1114.81 +505: Second derivatives: MINSECDER 0.00025 MAXSECDER 0.00723 +505: AVESECDER 0.00122 INTSECDER 152 +505: Max second derivative at: (15 15 15) +505: +505: STDERR: +505: Not an error 502: RETVAL: 0 502: STDOUT: Min: 0.875 -1.519 -1.519 502: Mean: 5.773 0.002 0.002 @@ -18935,41 +18986,70 @@ 502: 502: STDERR: 502: Not an error -329/578 Test #502: plm-warp-a-stats ...................... Passed 0.24 sec +331/578 Test #505: plm-warp-b-stats-1 .................... Passed 0.14 sec +test 535 + Start 535: plm-xf-convert-d-warp-2-stats + +535: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +535: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +535: Test timeout computed to be: 1500 +332/578 Test #502: plm-warp-a-stats ...................... Passed 0.15 sec +test 541 + Start 541: plm-xf-convert-h-stats + +541: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +541: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +541: Test timeout computed to be: 1500 +528: RETVAL: 0 +528: STDOUT: about to xform_convert +528: bspline_xform_initialize +528: Warning: vox_per_rgn was less than 4. +528: Warning: vox_per_rgn was less than 4. +528: Warning: vox_per_rgn was less than 4. +528: rdims = (1,1,1) +528: vox_per_rgn = (4,4,4) +528: cdims = (4 4 4) +528: did xform_convert +528: +528: STDERR: +528: Not an error +507: RETVAL: 0 +507: STDOUT: MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872 +507: +507: STDERR: +333/578 Test #528: plm-xf-convert-b ...................... Passed 0.10 sec +507: Not an error test 544 Start 544: plm-xf-convert-i-stats 544: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 544: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 544: Test timeout computed to be: 1500 +519: RETVAL: 0 +519: STDOUT: MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872 +519: +519: STDERR: +519: Not an error +510: RETVAL: 0 +510: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 +510: +510: STDERR: +510: Not an error 535: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 535: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd 535: EXPECTED_ERRNO is +334/578 Test #507: plm-warp-b-stats-2 .................... Passed 0.17 sec +335/578 Test #510: plm-warp-c-stats ...................... Passed 0.14 sec +336/578 Test #519: plm-warp-g-stats-1 .................... Passed 0.12 sec +525: RETVAL: 0 +525: STDOUT: MIN 0.000000 AVE 114.545189 MAX 996.552368 NONZERO 43320 NUMVOX 54872 +525: +525: STDERR: +525: Not an error +337/578 Test #525: plm-warp-i-stats-1 .................... Passed 0.12 sec 541: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 541: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd 541: EXPECTED_ERRNO is -505: RETVAL: 0 -505: STDOUT: Min: 0.875 -1.519 -1.519 -505: Mean: 5.773 0.002 0.002 -505: Max: 12.239 1.255 1.255 -505: Mean abs: 5.773 0.518 0.518 -505: Ave len: 5.853 -505: Jacobian: MINJAC 0.815198 MAXJAC 1.18104 -505: Energy: MINDIL -0.184 MAXDIL 0.216011 -505: MAXSTRAIN 0.267 TOTSTRAIN 1114.81 -505: Second derivatives: MINSECDER 0.00025 MAXSECDER 0.00723 -505: AVESECDER 0.00122 INTSECDER 152 -505: Max second derivative at: (15 15 15) -505: -505: STDERR: -505: Not an error -493: RETVAL: 0 -493: STDOUT: MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872 -493: -493: STDERR: -493: Not an error -330/578 Test #493: plm-threshold-b-stats ................. Passed 0.31 sec -331/578 Test #505: plm-warp-b-stats-1 .................... Passed 0.25 sec test 547 Start 547: xf-invert-vf-zero-1-stats @@ -18982,163 +19062,121 @@ 550: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-trans-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 550: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 550: Test timeout computed to be: 1500 -544: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -544: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd -544: EXPECTED_ERRNO is -547: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -547: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha -547: EXPECTED_ERRNO is -550: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -550: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha -550: EXPECTED_ERRNO is -516: RETVAL: 0 -516: STDOUT: Type = float -516: Planes = 1 -516: Origin = -147.5140 -381.8964 -136.9799 -516: Size = 38 38 38 -516: Spacing = 13.1579 13.1579 13.1579 -516: Direction = 0.9254 0.0180 -0.3785 0.1632 0.8826 0.4410 0.3420 -0.4698 0.8138 -516: -516: STDERR: -516: Not an error -332/578 Test #516: plm-warp-f-stats-1 .................... Passed 0.27 sec test 552 Start 552: xf-invert-vrs-a 552: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vrs-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 552: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 552: Test timeout computed to be: 1500 -496: RETVAL: 0 -496: STDOUT: MIN 0.000000 AVE 0.021978 MAX 1.000000 NONZERO 1206 NUMVOX 54872 -496: -496: STDERR: -496: Not an error -333/578 Test #496: plm-threshold-c-stats ................. Passed 0.38 sec test 554 Start 554: xf-invert-vrs-b 554: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vrs-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-b.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 554: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 554: Test timeout computed to be: 1500 -528: RETVAL: 0 -528: STDOUT: about to xform_convert -528: bspline_xform_initialize -528: Warning: vox_per_rgn was less than 4. -528: Warning: vox_per_rgn was less than 4. -528: Warning: vox_per_rgn was less than 4. -528: rdims = (1,1,1) -528: vox_per_rgn = (4,4,4) -528: cdims = (4 4 4) -528: did xform_convert -528: -528: STDERR: -528: Not an error 522: RETVAL: 0 522: STDOUT: MIN 0.000000 AVE 113.750511 MAX 996.000000 NONZERO 42867 NUMVOX 54872 522: 522: STDERR: 522: Not an error -334/578 Test #522: plm-warp-h-stats-1 .................... Passed 0.26 sec -335/578 Test #528: plm-xf-convert-b ...................... Passed 0.21 sec +338/578 Test #522: plm-warp-h-stats-1 .................... Passed 0.13 sec +544: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +544: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd +544: EXPECTED_ERRNO is +513: RETVAL: 0 +513: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 +513: +513: STDERR: +513: Not an error test 557 Start 557: proton-dose-1-stats 557: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 557: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 557: Test timeout computed to be: 1500 +339/578 Test #513: plm-warp-d-stats ...................... Passed 0.15 sec test 560 Start 560: proton-dose-4a-stats 560: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 560: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 560: Test timeout computed to be: 1500 +547: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +547: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha +547: EXPECTED_ERRNO is +550: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +550: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha +550: EXPECTED_ERRNO is 552: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 552: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm 552: EXPECTED_ERRNO is -525: RETVAL: 0 -525: STDOUT: MIN 0.000000 AVE 114.545189 MAX 996.552368 NONZERO 43320 NUMVOX 54872 -525: -525: STDERR: -525: Not an error -336/578 Test #525: plm-warp-i-stats-1 .................... Passed 0.26 sec +557: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +557: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha +557: EXPECTED_ERRNO is +554: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +554: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-b.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm +554: EXPECTED_ERRNO is +560: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +560: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha +560: EXPECTED_ERRNO is +516: RETVAL: 0 +516: STDOUT: Type = float +516: Planes = 1 +516: Origin = -147.5140 -381.8964 -136.9799 +516: Size = 38 38 38 +516: Spacing = 13.1579 13.1579 13.1579 +516: Direction = 0.9254 0.0180 -0.3785 0.1632 0.8826 0.4410 0.3420 -0.4698 0.8138 +516: +516: STDERR: +516: Not an error +340/578 Test #516: plm-warp-f-stats-1 .................... Passed 0.17 sec test 563 Start 563: proton-dose-4d-stats 563: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 563: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 563: Test timeout computed to be: 1500 -519: RETVAL: 0 -519: STDOUT: MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872 -519: -519: STDERR: -519: Not an error 532: RETVAL: 0 532: STDOUT: MIN -999.979248 AVE -745.231567 MAX 0.000000 NONZERO 5851 NUMVOX 6859 532: 532: STDERR: 532: Not an error -557: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -557: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha -557: EXPECTED_ERRNO is -554: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -554: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-b.tfm;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm -554: EXPECTED_ERRNO is -337/578 Test #519: plm-warp-g-stats-1 .................... Passed 0.32 sec -338/578 Test #532: plm-xf-convert-d-warp-1-stats ......... Passed 0.21 sec +341/578 Test #532: plm-xf-convert-d-warp-1-stats ......... Passed 0.18 sec test 566 Start 566: proton-dose-5a-stats 566: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 566: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 566: Test timeout computed to be: 1500 +563: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +563: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha +563: EXPECTED_ERRNO is +566: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +566: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha +566: EXPECTED_ERRNO is +552: RETVAL: 0 +552: STDOUT: +552: STDERR: +552: Not an error +342/578 Test #552: xf-invert-vrs-a ....................... Passed 0.10 sec test 569 Start 569: proton-dose-5d-stats 569: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 569: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 569: Test timeout computed to be: 1500 -560: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -560: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha -560: EXPECTED_ERRNO is -513: RETVAL: 0 -513: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 -513: -513: STDERR: -513: Not an error -563: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -563: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha -563: EXPECTED_ERRNO is -339/578 Test #513: plm-warp-d-stats ...................... Passed 0.38 sec +535: RETVAL: 0 +535: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 +535: +535: STDERR: +535: Not an error +343/578 Test #535: plm-xf-convert-d-warp-2-stats ......... Passed 0.15 sec test 572 Start 572: proton-dose-6a-stats 572: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-6a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 572: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 572: Test timeout computed to be: 1500 -510: RETVAL: 0 -510: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 -510: -510: STDERR: -510: Not an error -340/578 Test #510: plm-warp-c-stats ...................... Passed 0.40 sec -test 574 - Start 574: proton-dose-8d - -574: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-8d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -574: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -574: Test timeout computed to be: 1500 -566: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -566: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha -566: EXPECTED_ERRNO is -569: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -569: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha -569: EXPECTED_ERRNO is -572: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -572: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha -572: EXPECTED_ERRNO is -574: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -574: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt -574: EXPECTED_ERRNO is 541: RETVAL: 0 541: STDOUT: Min: 20.000 0.000 0.000 541: Mean: 20.000 0.000 0.000 @@ -19154,13 +19192,6 @@ 541: 541: STDERR: 541: Not an error -341/578 Test #541: plm-xf-convert-h-stats ................ Passed 0.30 sec -test 576 - Start 576: wed-a - -576: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -576: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -576: Test timeout computed to be: 1500 544: RETVAL: 0 544: STDOUT: Min: 7.161 -0.245 -0.245 544: Mean: 8.546 0.041 0.041 @@ -19176,13 +19207,38 @@ 544: 544: STDERR: 544: Not an error -535: RETVAL: 0 -535: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 -535: -535: STDERR: -535: Not an error -342/578 Test #535: plm-xf-convert-d-warp-2-stats ......... Passed 0.31 sec -343/578 Test #544: plm-xf-convert-i-stats ................ Passed 0.29 sec +344/578 Test #541: plm-xf-convert-h-stats ................ Passed 0.16 sec +test 574 + Start 574: proton-dose-8d + +574: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-8d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +574: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +574: Test timeout computed to be: 1500 +345/578 Test #544: plm-xf-convert-i-stats ................ Passed 0.15 sec +test 576 + Start 576: wed-a + +576: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +576: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +576: Test timeout computed to be: 1500 +557: RETVAL: 0 +557: STDOUT: MIN 0.000000 AVE 0.143515 MAX 70.000000 NONZERO 775 NUMVOX 216000 +557: +557: STDERR: +557: Not an error +569: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +569: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha +569: EXPECTED_ERRNO is +560: RETVAL: 0 +560: STDOUT: MIN 0.000000 AVE 0.266114 MAX 100.000000 NONZERO 932 NUMVOX 216000 +560: +560: STDERR: +560: Not an error +572: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +572: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha +572: EXPECTED_ERRNO is +346/578 Test #557: proton-dose-1-stats ................... Passed 0.13 sec +347/578 Test #560: proton-dose-4a-stats .................. Passed 0.13 sec test 16 Start 16: gauss-7 @@ -19195,76 +19251,100 @@ 23: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha;--pattern;lung;--lung-tumor-pos;-5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 23: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 23: Test timeout computed to be: 1500 -576: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -576: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt -576: EXPECTED_ERRNO is -552: RETVAL: 0 -552: STDOUT: -552: STDERR: -552: Not an error -16: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -16: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;20 20 20 -16: EXPECTED_ERRNO is -344/578 Test #552: xf-invert-vrs-a ....................... Passed 0.21 sec +574: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +574: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt +574: EXPECTED_ERRNO is +550: RETVAL: 0 +550: STDOUT: Min: -10.000 0.000 0.000 +550: Mean: -9.999 0.000 0.000 +550: Max: -9.963 0.000 0.000 +550: Mean abs: 9.999 0.000 0.000 +550: Ave len: 9.999 +550: Jacobian: MINJAC 0.998589 MAXJAC 1 +550: Energy: MINDIL -0.00141 MAXDIL 3.62396e-08 +550: MAXSTRAIN 3.62e-08 TOTSTRAIN -2.78625 +550: Second derivatives: MINSECDER 0 MAXSECDER 2.19e-06 +550: AVESECDER 5.23e-08 INTSECDER 6.54 +550: Max second derivative at: (2 1 1) +550: +550: STDERR: +550: Not an error +348/578 Test #550: xf-invert-vf-trans-1-stats ............ Passed 0.15 sec test 24 Start 24: gw-lung-b 24: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha;--pattern;lung;--lung-tumor-pos;0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 24: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 24: Test timeout computed to be: 1500 +16: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +16: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;20 20 20 +16: EXPECTED_ERRNO is +23: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +23: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha;--pattern;lung;--lung-tumor-pos;-5 +23: EXPECTED_ERRNO is +24: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +24: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha;--pattern;lung;--lung-tumor-pos;0 +24: EXPECTED_ERRNO is +576: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +576: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt +576: EXPECTED_ERRNO is 554: RETVAL: 0 554: STDOUT: 554: STDERR: 554: Not an error -507: RETVAL: 0 -507: STDOUT: MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872 -507: -507: STDERR: -507: Not an error -345/578 Test #507: plm-warp-b-stats-2 .................... Passed 0.53 sec -346/578 Test #554: xf-invert-vrs-b ....................... Passed 0.21 sec +349/578 Test #554: xf-invert-vrs-b ....................... Passed 0.17 sec test 25 Start 25: gw-lung-c 25: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha;--pattern;lung;--lung-tumor-pos;5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 25: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 25: Test timeout computed to be: 1500 +547: RETVAL: 0 +547: STDOUT: Min: 0.000 0.000 0.000 +547: Mean: 0.000 0.000 0.000 +547: Max: 0.000 0.000 0.000 +547: Mean abs: 0.000 0.000 0.000 +547: Ave len: 0.000 +547: Jacobian: MINJAC 1 MAXJAC 1 +547: Energy: MINDIL 0 MAXDIL 0 +547: MAXSTRAIN 0 TOTSTRAIN 0 +547: Second derivatives: MINSECDER 0 MAXSECDER 0 +547: AVESECDER 0 INTSECDER 0 +547: Max second derivative at: (1 1 1) +547: +547: STDERR: +547: Not an error +350/578 Test #547: xf-invert-vf-zero-1-stats ............. Passed 0.19 sec test 26 Start 26: pat-1 26: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=pat-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--pattern;rect;--dim;30 30 30;--background;-1000;--foreground;0;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;10 10 10;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/pat-1-dicom;--filenames-without-uids;--patient-id;PATIENT-ID;--patient-name;NAME^PATIENT;--series-description;Series Description Here" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 26: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 26: Test timeout computed to be: 1500 -23: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -23: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha;--pattern;lung;--lung-tumor-pos;-5 -23: EXPECTED_ERRNO is 25: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 25: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha;--pattern;lung;--lung-tumor-pos;5 25: EXPECTED_ERRNO is -560: RETVAL: 0 -560: STDOUT: MIN 0.000000 AVE 0.266114 MAX 100.000000 NONZERO 932 NUMVOX 216000 -560: -560: STDERR: -560: Not an error -347/578 Test #560: proton-dose-4a-stats .................. Passed 0.22 sec +566: RETVAL: 0 +566: STDOUT: MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000 +566: +566: STDERR: +566: Not an error +351/578 Test #566: proton-dose-5a-stats .................. Passed 0.14 sec test 35 Start 35: rect-6 35: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;0 -300 -200;--direction-cosines;rotated-2" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 35: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 35: Test timeout computed to be: 1500 -24: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -24: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha;--pattern;lung;--lung-tumor-pos;0 -24: EXPECTED_ERRNO is 563: RETVAL: 0 563: STDOUT: MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000 563: 563: STDERR: -563: Not an error 26: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 26: PARMS is synth;--pattern;rect;--dim;30 30 30;--background;-1000;--foreground;0;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;10 10 10;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/pat-1-dicom;--filenames-without-uids;--patient-id;PATIENT-ID;--patient-name;NAME^PATIENT;--series-description;Series Description Here 26: EXPECTED_ERRNO is -348/578 Test #563: proton-dose-4d-stats .................. Passed 0.24 sec +563: Not an error +352/578 Test #563: proton-dose-4d-stats .................. Passed 0.18 sec test 36 Start 36: rect-7 @@ -19277,34 +19357,27 @@ 36: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 36: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;100 300 -100;--direction-cosines;rotated-3 36: EXPECTED_ERRNO is -557: RETVAL: 0 -557: STDOUT: MIN 0.000000 AVE 0.143515 MAX 70.000000 NONZERO 775 NUMVOX 216000 -557: -557: STDERR: -557: Not an error -349/578 Test #557: proton-dose-1-stats ................... Passed 0.33 sec +569: RETVAL: 0 +569: STDOUT: MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000 +569: +569: STDERR: +569: Not an error +353/578 Test #569: proton-dose-5d-stats .................. Passed 0.13 sec test 41 Start 41: rect-10-roi-2 41: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10-roi-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-220 60 -60 60 -60 60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 41: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 41: Test timeout computed to be: 1500 -547: RETVAL: 0 -547: STDOUT: Min: 0.000 0.000 0.000 -547: Mean: 0.000 0.000 0.000 -547: Max: 0.000 0.000 0.000 -547: Mean abs: 0.000 0.000 0.000 -547: Ave len: 0.000 -547: Jacobian: MINJAC 1 MAXJAC 1 -547: Energy: MINDIL 0 MAXDIL 0 -547: MAXSTRAIN 0 TOTSTRAIN 0 -547: Second derivatives: MINSECDER 0 MAXSECDER 0 -547: AVESECDER 0 INTSECDER 0 -547: Max second derivative at: (1 1 1) -547: -547: STDERR: -547: Not an error -350/578 Test #547: xf-invert-vf-zero-1-stats ............. Passed 0.44 sec +16: RETVAL: 0 +16: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha +16: +16: STDERR: +16: Not an error +41: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +41: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-220 60 -60 60 -60 60 +41: EXPECTED_ERRNO is +354/578 Test #16: gauss-7 ............................... Passed 0.12 sec test 50 Start 50: rect-18 @@ -19316,220 +19389,98 @@ 572: 572: STDERR: 572: Not an error -550: RETVAL: 0 -550: STDOUT: Min: -10.000 0.000 0.000 -550: Mean: -9.999 0.000 0.000 -550: Max: -9.963 0.000 0.000 -550: Mean abs: 9.999 0.000 0.000 -550: Ave len: 9.999 -550: Jacobian: MINJAC 0.998589 MAXJAC 1 -550: Energy: MINDIL -0.00141 MAXDIL 3.62396e-08 -550: MAXSTRAIN 3.62e-08 TOTSTRAIN -2.78625 -550: Second derivatives: MINSECDER 0 MAXSECDER 2.19e-06 -550: AVESECDER 5.23e-08 INTSECDER 6.54 -550: Max second derivative at: (2 1 1) -550: -550: STDERR: -550: Not an error -351/578 Test #572: proton-dose-6a-stats .................. Passed 0.29 sec +355/578 Test #572: proton-dose-6a-stats .................. Passed 0.15 sec test 60 Start 60: rgc-1 60: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rgc-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha;--output-type;float;--pattern;rect;--dim;10 10 1;--background;0;--foreground;30;--rect-size;0 10 0 5 0 0;--origin;0 0 0;--spacing;1 1 1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 60: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 60: Test timeout computed to be: 1500 -16: RETVAL: 0 -16: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha -16: -16: STDERR: -16: Not an error -41: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -41: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-220 60 -60 60 -60 60 -41: EXPECTED_ERRNO is -352/578 Test #550: xf-invert-vf-trans-1-stats ............ Passed 0.45 sec -353/578 Test #16: gauss-7 ............................... Passed 0.20 sec +23: RETVAL: 0 +23: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha +23: +23: STDERR: +23: Not an error +356/578 Test #23: gw-lung-a ............................. Passed 0.13 sec test 69 Start 69: xramp-1 69: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha;--output-type;float;--pattern;xramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 69: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 69: Test timeout computed to be: 1500 -test 70 - Start 70: yramp-1 - -70: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=yramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -70: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -70: Test timeout computed to be: 1500 -69: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -69: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha;--output-type;float;--pattern;xramp;--dim;38 38 38 -69: EXPECTED_ERRNO is -60: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -60: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha;--output-type;float;--pattern;rect;--dim;10 10 1;--background;0;--foreground;30;--rect-size;0 10 0 5 0 0;--origin;0 0 0;--spacing;1 1 1 -60: EXPECTED_ERRNO is 50: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 50: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha;--pattern;rect;--dim;15 15 15;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;20 20 20 50: EXPECTED_ERRNO is -70: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -70: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38 -70: EXPECTED_ERRNO is -24: RETVAL: 0 -24: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha -24: -24: STDERR: -24: Not an error -354/578 Test #24: gw-lung-b ............................. Passed 0.21 sec -test 71 - Start 71: zramp-1 - -71: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=zramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -71: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -71: Test timeout computed to be: 1500 -566: RETVAL: 0 -566: STDOUT: MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000 -566: -566: STDERR: -566: Not an error -355/578 Test #566: proton-dose-5a-stats .................. Passed 0.39 sec -test 76 - Start 76: vf-gaussian-1 - -76: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-gaussian-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -76: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -76: Test timeout computed to be: 1500 -71: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -71: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38 -71: EXPECTED_ERRNO is -36: RETVAL: 0 -36: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha -36: -36: STDERR: -36: Not an error -76: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -76: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38 -76: EXPECTED_ERRNO is -35: RETVAL: 0 -35: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha -35: -35: STDERR: -35: Not an error -356/578 Test #36: rect-7 ................................ Passed 0.20 sec -test 78 - Start 78: vf-zero-check - -78: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=0.000" "-DUPPER_THRESH=0.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -78: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -78: Test timeout computed to be: 1500 -357/578 Test #35: rect-6 ................................ Passed 0.24 sec -test 80 - Start 80: vf-trans-1-check - -80: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -80: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -80: Test timeout computed to be: 1500 -80: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt -80: -- REGEX is Mean: *([-0-9.]*) -80: -- LOWER_THRESH is 10.000 -80: -- UPPER_THRESH is 10.000 -80: -- PARSED VALUE=|Mean: 10.000 0.000 0.000| -80: -- PARSED_VALUE=|10.000| -80: Not an error +60: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +60: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha;--output-type;float;--pattern;rect;--dim;10 10 1;--background;0;--foreground;30;--rect-size;0 10 0 5 0 0;--origin;0 0 0;--spacing;1 1 1 +60: EXPECTED_ERRNO is +69: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +69: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha;--output-type;float;--pattern;xramp;--dim;38 38 38 +69: EXPECTED_ERRNO is 25: RETVAL: 0 -25: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha -25: -25: STDERR: -25: Not an error -358/578 Test #25: gw-lung-c ............................. Passed 0.30 sec -359/578 Test #80: vf-trans-1-check ...................... Passed 0.03 sec -test 82 - Start 82: vf-trans-2-check - -82: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt" "-DREGEX=Mean: *[-0-9.]* *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -82: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -82: Test timeout computed to be: 1500 -test 84 - Start 84: vf-radial-1-check - -84: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=5.15" "-DUPPER_THRESH=5.16" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -84: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -84: Test timeout computed to be: 1500 -23: RETVAL: 0 -23: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha -23: -23: STDERR: -23: Not an error -78: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt -78: -- REGEX is Mean abs: *([-0-9.]*) -78: -- LOWER_THRESH is 0.000 -78: -- UPPER_THRESH is 0.000 -78: -- PARSED VALUE=|Mean abs: 0.000 0.000 0.000| -78: -- PARSED_VALUE=|0.000| -78: Not an error -360/578 Test #23: gw-lung-a ............................. Passed 0.34 sec -361/578 Test #78: vf-zero-check ......................... Passed 0.05 sec -test 86 - Start 86: plm-compare-a-check - -86: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-a.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -86: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -86: Test timeout computed to be: 1500 -test 88 - Start 88: plm-compare-b-check - -88: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -88: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -88: Test timeout computed to be: 1500 -82: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt -82: -- REGEX is Mean: *[-0-9.]* *([-0-9.]*) -82: -- LOWER_THRESH is 10.000 -82: -- UPPER_THRESH is 10.000 -82: -- PARSED VALUE=|Mean: 0.000 10.000 0.000| -82: -- PARSED_VALUE=|10.000| -82: Not an error -569: RETVAL: 0 -569: STDOUT: MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000 -569: -569: STDERR: -569: Not an error -362/578 Test #569: proton-dose-5d-stats .................. Passed 0.47 sec -test 90 - Start 90: plm-compare-c-check - -90: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-c.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -90: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -90: Test timeout computed to be: 1500 -84: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt -84: -- REGEX is Mean abs: *([-0-9.]*) -84: -- LOWER_THRESH is 5.15 -84: -- UPPER_THRESH is 5.16 -84: -- PARSED VALUE=|Mean abs: 5.157 5.157 5.157| -84: -- PARSED_VALUE=|5.157| -84: Not an error -363/578 Test #82: vf-trans-2-check ...................... Passed 0.04 sec -364/578 Test #84: vf-radial-1-check ..................... Passed 0.04 sec -41: RETVAL: 0 -41: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha -41: -41: STDERR: -test 93 - Start 93: plm-diff-a-check +25: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha +25: +25: STDERR: +25: Not an error +357/578 Test #25: gw-lung-c ............................. Passed 0.13 sec +test 70 + Start 70: yramp-1 -93: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -93: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -93: Test timeout computed to be: 1500 -test 96 - Start 96: plm-diff-b-check +70: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=yramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +70: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +70: Test timeout computed to be: 1500 +24: RETVAL: 0 +24: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha +24: +24: STDERR: +24: Not an error +358/578 Test #24: gw-lung-b ............................. Passed 0.17 sec +test 71 + Start 71: zramp-1 -96: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-stats.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -96: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -96: Test timeout computed to be: 1500 -41: Not an error -365/578 Test #41: rect-10-roi-2 ......................... Passed 0.22 sec -test 98 - Start 98: demons-a-check +71: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=zramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +71: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +71: Test timeout computed to be: 1500 +35: RETVAL: 0 +35: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha +35: +35: STDERR: +35: Not an error +70: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +70: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38 +70: EXPECTED_ERRNO is +359/578 Test #35: rect-6 ................................ Passed 0.13 sec +test 76 + Start 76: vf-gaussian-1 -98: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.stdout.txt" "-DREGEX=^Mean: *([0-9.]*)" "-DLOWER_THRESH=3.4" "-DUPPER_THRESH=3.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -98: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -98: Test timeout computed to be: 1500 +76: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-gaussian-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +76: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +76: Test timeout computed to be: 1500 +71: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +71: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38 +71: EXPECTED_ERRNO is +36: RETVAL: 0 +36: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha +36: +36: STDERR: +36: Not an error +360/578 Test #36: rect-7 ................................ Passed 0.13 sec +test 78 + Start 78: vf-zero-check + +78: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=0.000" "-DUPPER_THRESH=0.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +78: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +78: Test timeout computed to be: 1500 +76: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +76: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38 +76: EXPECTED_ERRNO is +26: RETVAL: 0 +26: STDOUT: Doing extraction +26: Keyholizing structure 0. +26: Write: DoseGridScaling = 0.000000 +26: +26: STDERR: +26: Not an error 574: RETVAL: 0 574: STDOUT: 574: [PLAN] @@ -19558,6 +19509,11 @@ 574: offset: 1500 ** 574: ap_center in pixels: 20 20 ** 574: i_res: 41 41 ** +78: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt +78: -- REGEX is Mean abs: *([-0-9.]*) +78: -- LOWER_THRESH is 0.000 +78: -- UPPER_THRESH is 0.000 +78: -- PARSED VALUE=|Mean abs: 0.000 0.000 0.000| 574: spacing: 3.75 3.75 ** 574: source_size: 0 ** 574: ap_file_in: ** @@ -19569,6 +19525,8 @@ 574: spread: P0 574: weight: P0 574: +78: -- PARSED_VALUE=|0.000| +78: Not an error 574: Start dose calculation Beam 1 574: Plan_calc::compute_beam_dose(beam) entry -- 574: Setting RVRTS = 1 @@ -19588,16 +19546,90 @@ 574: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 574: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha 574: Sigma: 0.000000 seconds -574: Calc: 0.102415 seconds -574: IO: 0.055221 seconds -574: Reformat: 0.017503 seconds -574: Misc: 0.002168 seconds +574: Calc: 0.044399 seconds +574: IO: 0.019314 seconds +574: Reformat: 0.014252 seconds +574: Misc: 0.003307 seconds 574: done. 574: -574: Total execution time : 0.182584 seconds. +574: Total execution time : 0.081493 seconds. 574: 574: STDERR: 574: Not an error +361/578 Test #78: vf-zero-check ......................... Passed 0.02 sec +41: RETVAL: 0 +41: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha +41: +41: STDERR: +test 80 + Start 80: vf-trans-1-check + +80: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +80: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +80: Test timeout computed to be: 1500 +362/578 Test #26: pat-1 ................................. Passed 0.18 sec +41: Not an error +363/578 Test #41: rect-10-roi-2 ......................... Passed 0.12 sec +test 82 + Start 82: vf-trans-2-check + +82: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt" "-DREGEX=Mean: *[-0-9.]* *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +82: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +82: Test timeout computed to be: 1500 +364/578 Test #574: proton-dose-8d ........................ Passed 0.24 sec +test 84 + Start 84: vf-radial-1-check + +84: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=5.15" "-DUPPER_THRESH=5.16" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +84: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +84: Test timeout computed to be: 1500 +test 86 + Start 86: plm-compare-a-check + +86: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-a.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +86: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +86: Test timeout computed to be: 1500 +50: RETVAL: 0 +50: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha +50: +50: STDERR: +50: Not an error +365/578 Test #50: rect-18 ............................... Passed 0.12 sec +test 88 + Start 88: plm-compare-b-check + +88: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +88: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +88: Test timeout computed to be: 1500 +80: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt +80: -- REGEX is Mean: *([-0-9.]*) +80: -- LOWER_THRESH is 10.000 +80: -- UPPER_THRESH is 10.000 +80: -- PARSED VALUE=|Mean: 10.000 0.000 0.000| +80: -- PARSED_VALUE=|10.000| +80: Not an error +366/578 Test #80: vf-trans-1-check ...................... Passed 0.02 sec +82: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt +82: -- REGEX is Mean: *[-0-9.]* *([-0-9.]*) +82: -- LOWER_THRESH is 10.000 +82: -- UPPER_THRESH is 10.000 +82: -- PARSED VALUE=|Mean: 0.000 10.000 0.000| +82: -- PARSED_VALUE=|10.000| +test 90 + Start 90: plm-compare-c-check + +90: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-c.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +90: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +90: Test timeout computed to be: 1500 +82: Not an error +84: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt +84: -- REGEX is Mean abs: *([-0-9.]*) +84: -- LOWER_THRESH is 5.15 +84: -- UPPER_THRESH is 5.16 +84: -- PARSED VALUE=|Mean abs: 5.157 5.157 5.157| +84: -- PARSED_VALUE=|5.157| +84: Not an error +367/578 Test #82: vf-trans-2-check ...................... Passed 0.02 sec 86: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-a.stdout.txt 86: -- REGEX is AVE *([-0-9.]*) 86: -- LOWER_THRESH is 7.76 @@ -19605,11 +19637,40 @@ 86: -- PARSED VALUE=|MIN -558.201904 AVE 7.769665 MAX 558.680786| 86: -- PARSED_VALUE=|7.769665| 86: Not an error -60: RETVAL: 0 -60: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha -60: -60: STDERR: -60: Not an error +test 93 + Start 93: plm-diff-a-check + +93: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +93: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +93: Test timeout computed to be: 1500 +368/578 Test #84: vf-radial-1-check ..................... Passed 0.02 sec +369/578 Test #86: plm-compare-a-check ................... Passed 0.01 sec +test 96 + Start 96: plm-diff-b-check + +96: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-stats.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +96: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +96: Test timeout computed to be: 1500 +test 98 + Start 98: demons-a-check + +98: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.stdout.txt" "-DREGEX=^Mean: *([0-9.]*)" "-DLOWER_THRESH=3.4" "-DUPPER_THRESH=3.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +98: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +98: Test timeout computed to be: 1500 +88: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt +88: -- REGEX is Ave len: *([-0-9.]*) +88: -- LOWER_THRESH is 14.141 +88: -- UPPER_THRESH is 14.143 +88: -- PARSED VALUE=|Ave len: 14.142| +88: -- PARSED_VALUE=|14.142| +88: Not an error +370/578 Test #88: plm-compare-b-check ................... Passed 0.02 sec +test 101 + Start 101: drr-a-check + +101: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +101: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +101: Test timeout computed to be: 1500 90: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-c.stdout.txt 90: -- REGEX is Ave len: *([-0-9.]*) 90: -- LOWER_THRESH is 14.141 @@ -19617,27 +19678,13 @@ 90: -- PARSED VALUE=|Ave len: 14.142| 90: -- PARSED_VALUE=|14.142| 90: Not an error -366/578 Test #574: proton-dose-8d ........................ Passed 0.49 sec -367/578 Test #60: rgc-1 ................................. Passed 0.21 sec -test 101 - Start 101: drr-a-check - -101: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -101: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -101: Test timeout computed to be: 1500 +371/578 Test #90: plm-compare-c-check ................... Passed 0.02 sec test 104 Start 104: drr-b-check 104: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 104: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 104: Test timeout computed to be: 1500 -93: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt -93: -- REGEX is AVE *([-0-9.]*) -93: -- LOWER_THRESH is 7.76 -93: -- UPPER_THRESH is 7.78 -93: -- PARSED VALUE=|MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872| -93: -- PARSED_VALUE=|7.769665| -93: Not an error 96: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-stats.stdout.txt 96: -- REGEX is Ave len: *([-0-9.]*) 96: -- LOWER_THRESH is 14.141 @@ -19645,6 +19692,21 @@ 96: -- PARSED VALUE=|Ave len: 14.142| 96: -- PARSED_VALUE=|14.142| 96: Not an error +93: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt +93: -- REGEX is AVE *([-0-9.]*) +93: -- LOWER_THRESH is 7.76 +93: -- UPPER_THRESH is 7.78 +93: -- PARSED VALUE=|MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872| +93: -- PARSED_VALUE=|7.769665| +93: Not an error +60: RETVAL: 0 +60: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha +60: +60: STDERR: +60: Not an error +372/578 Test #96: plm-diff-b-check ...................... Passed 0.02 sec +373/578 Test #93: plm-diff-a-check ...................... Passed 0.02 sec +374/578 Test #60: rgc-1 ................................. Passed 0.14 sec 98: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.stdout.txt 98: -- REGEX is ^Mean: *([0-9.]*) 98: -- LOWER_THRESH is 3.4 @@ -19652,11 +19714,11 @@ 98: -- PARSED VALUE=|Mean: 3.443 0.016 0.016| 98: -- PARSED_VALUE=|3.443| 98: Not an error -368/578 Test #86: plm-compare-a-check ................... Passed 0.05 sec -369/578 Test #90: plm-compare-c-check ................... Passed 0.04 sec -370/578 Test #93: plm-diff-a-check ...................... Passed 0.03 sec -371/578 Test #96: plm-diff-b-check ...................... Passed 0.03 sec -372/578 Test #98: demons-a-check ........................ Passed 0.03 sec +69: RETVAL: 0 +69: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha +69: +69: STDERR: +69: Not an error test 107 Start 107: drr-c-check @@ -19675,6 +19737,8 @@ 113: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=-987.5" "-DUPPER_THRESH=-986.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 113: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 113: Test timeout computed to be: 1500 +375/578 Test #69: xramp-1 ............................... Passed 0.14 sec +376/578 Test #98: demons-a-check ........................ Passed 0.02 sec test 116 Start 116: landmark-warp-a-check-1 @@ -19687,32 +19751,48 @@ 118: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-23.2" "-DUPPER_THRESH=-22.7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 118: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 118: Test timeout computed to be: 1500 -88: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt -88: -- REGEX is Ave len: *([-0-9.]*) -88: -- LOWER_THRESH is 14.141 -88: -- UPPER_THRESH is 14.143 -88: -- PARSED VALUE=|Ave len: 14.142| -88: -- PARSED_VALUE=|14.142| -88: Not an error -50: RETVAL: 0 -50: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha -50: -50: STDERR: -50: Not an error -373/578 Test #50: rect-18 ............................... Passed 0.25 sec -374/578 Test #88: plm-compare-b-check ................... Passed 0.07 sec +101: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt +101: -- REGEX is MAX *([-0-9.]*) +101: -- LOWER_THRESH is 0.045 +101: -- UPPER_THRESH is 0.055 +101: -- PARSED VALUE=|MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384| +101: -- PARSED_VALUE=|0.050109| +101: Not an error +377/578 Test #101: drr-a-check ........................... Passed 0.03 sec +104: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b-stats.stdout.txt +104: -- REGEX is MAX *([-0-9.]*) +104: -- LOWER_THRESH is 0.045 +104: -- UPPER_THRESH is 0.055 +104: -- PARSED VALUE=|MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384| +104: -- PARSED_VALUE=|0.049634| +104: Not an error test 121 Start 121: landmark-warp-b-check-1 121: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-992.2" "-DUPPER_THRESH=-991.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 121: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 121: Test timeout computed to be: 1500 +70: RETVAL: 0 +70: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha +70: +70: STDERR: +70: Not an error +107: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c-stats.stdout.txt +107: -- REGEX is MAX *([-0-9.]*) +107: -- LOWER_THRESH is 0.045 +107: -- UPPER_THRESH is 0.055 +107: -- PARSED VALUE=|MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384| +107: -- PARSED_VALUE=|0.050494| +107: Not an error +378/578 Test #104: drr-b-check ........................... Passed 0.02 sec test 123 Start 123: landmark-warp-b-check-2 123: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-1.55" "-DUPPER_THRESH=-1.4" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 123: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 123: Test timeout computed to be: 1500 +379/578 Test #70: yramp-1 ............................... Passed 0.12 sec +380/578 Test #107: drr-c-check ........................... Passed 0.02 sec 110: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a-stats.stdout.txt 110: -- REGEX is MAX *([-0-9.]*) 110: -- LOWER_THRESH is -987.5 @@ -19720,19 +19800,6 @@ 110: -- PARSED VALUE=|MIN -1000.000000 AVE -999.859619 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600| 110: -- PARSED_VALUE=|-987.021973| 110: Not an error -107: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c-stats.stdout.txt -107: -- REGEX is MAX *([-0-9.]*) -107: -- LOWER_THRESH is 0.045 -107: -- UPPER_THRESH is 0.055 -107: -- PARSED VALUE=|MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384| -107: -- PARSED_VALUE=|0.050494| -107: Not an error -375/578 Test #107: drr-c-check ........................... Passed 0.03 sec -376/578 Test #110: fdk-cpu-a-check ....................... Passed 0.03 sec -101: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt -101: -- REGEX is MAX *([-0-9.]*) -101: -- LOWER_THRESH is 0.045 -101: -- UPPER_THRESH is 0.055 test 126 Start 126: landmark-warp-c-check-1 @@ -19745,9 +19812,6 @@ 128: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-1.6" "-DUPPER_THRESH=-1.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 128: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 128: Test timeout computed to be: 1500 -101: -- PARSED VALUE=|MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384| -101: -- PARSED_VALUE=|0.050109| -101: Not an error 113: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d-stats.stdout.txt 113: -- REGEX is MAX *([-0-9.]*) 113: -- LOWER_THRESH is -987.5 @@ -19755,15 +19819,8 @@ 113: -- PARSED VALUE=|MIN -1000.000000 AVE -999.848633 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600| 113: -- PARSED_VALUE=|-987.021973| 113: Not an error -377/578 Test #101: drr-a-check ........................... Passed 0.05 sec -378/578 Test #113: fdk-cpu-d-check ....................... Passed 0.04 sec -118: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-2.stdout.txt -118: -- REGEX is Mean: *([-0-9.]*) -118: -- LOWER_THRESH is -23.2 -118: -- UPPER_THRESH is -22.7 -118: -- PARSED VALUE=|Mean: -22.960 0.011 0.000| -118: -- PARSED_VALUE=|-22.960| -118: Not an error +381/578 Test #110: fdk-cpu-a-check ....................... Passed 0.02 sec +382/578 Test #113: fdk-cpu-d-check ....................... Passed 0.02 sec test 129 Start 129: landmark-warp-d @@ -19776,20 +19833,6 @@ 132: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-1000.1" "-DUPPER_THRESH=-999.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 132: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 132: Test timeout computed to be: 1500 -104: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b-stats.stdout.txt -104: -- REGEX is MAX *([-0-9.]*) -104: -- LOWER_THRESH is 0.045 -104: -- UPPER_THRESH is 0.055 -104: -- PARSED VALUE=|MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384| -104: -- PARSED_VALUE=|0.049634| -104: Not an error -121: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-1.stdout.txt -121: -- REGEX is AVE *([-0-9.]*) -121: -- LOWER_THRESH is -992.2 -121: -- UPPER_THRESH is -991.8 -121: -- PARSED VALUE=|MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872| -121: -- PARSED_VALUE=|-992.005493| -121: Not an error 116: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-1.stdout.txt 116: -- REGEX is AVE *([-0-9.]*) 116: -- LOWER_THRESH is -992.0 @@ -19797,8 +19840,15 @@ 116: -- PARSED VALUE=|MIN -1000.000000 AVE -991.799744 MAX 0.000000 NONZERO 54494 NUMVOX 54872| 116: -- PARSED_VALUE=|-991.799744| 116: Not an error -379/578 Test #104: drr-b-check ........................... Passed 0.06 sec -380/578 Test #118: landmark-warp-a-check-2 ............... Passed 0.04 sec +383/578 Test #116: landmark-warp-a-check-1 ............... Passed 0.02 sec +118: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-2.stdout.txt +118: -- REGEX is Mean: *([-0-9.]*) +118: -- LOWER_THRESH is -23.2 +118: -- UPPER_THRESH is -22.7 +118: -- PARSED VALUE=|Mean: -22.960 0.011 0.000| +118: -- PARSED_VALUE=|-22.960| +118: Not an error +384/578 Test #118: landmark-warp-a-check-2 ............... Passed 0.02 sec test 135 Start 135: plm-add-b-check @@ -19811,13 +19861,20 @@ 138: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=20.000" "-DUPPER_THRESH=20.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 138: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 138: Test timeout computed to be: 1500 -381/578 Test #116: landmark-warp-a-check-1 ............... Passed 0.05 sec -test 141 - Start 141: plm-add-vf-b-check - -141: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.000" "-DUPPER_THRESH=5.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -141: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -141: Test timeout computed to be: 1500 +71: RETVAL: 0 +71: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha +71: +71: STDERR: +71: Not an error +385/578 Test #71: zramp-1 ............................... Passed 0.13 sec +121: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-1.stdout.txt +121: -- REGEX is AVE *([-0-9.]*) +121: -- LOWER_THRESH is -992.2 +121: -- UPPER_THRESH is -991.8 +121: -- PARSED VALUE=|MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872| +121: -- PARSED_VALUE=|-992.005493| +121: Not an error +386/578 Test #121: landmark-warp-b-check-1 ............... Passed 0.02 sec 123: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-2.stdout.txt 123: -- REGEX is Mean: *([-0-9.]*) 123: -- LOWER_THRESH is -1.55 @@ -19825,28 +19882,29 @@ 123: -- PARSED VALUE=|Mean: -1.500 0.018 0.000| 123: -- PARSED_VALUE=|-1.500| 123: Not an error -382/578 Test #121: landmark-warp-b-check-1 ............... Passed 0.05 sec -383/578 Test #123: landmark-warp-b-check-2 ............... Passed 0.05 sec +76: RETVAL: 0 +76: STDOUT: Setting header +76: Origin = -243.4211 -243.4211 -243.4211 +76: Size = 38 38 38 +76: Spacing = 13.1579 13.1579 13.1579 +76: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +76: Header was set +76: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha +76: +76: STDERR: +76: Not an error +test 141 + Start 141: plm-add-vf-b-check + +141: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.000" "-DUPPER_THRESH=5.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +141: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +141: Test timeout computed to be: 1500 test 144 Start 144: plm-adjust-a-check 144: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 144: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 144: Test timeout computed to be: 1500 -test 147 - Start 147: plm-adjust-b-check - -147: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -147: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -147: Test timeout computed to be: 1500 -128: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-2.stdout.txt -128: -- REGEX is Mean: *([-0-9.]*) -128: -- LOWER_THRESH is -1.6 -128: -- UPPER_THRESH is -1.5 -128: -- PARSED VALUE=|Mean: -1.562 0.019 0.000| -128: -- PARSED_VALUE=|-1.562| -128: Not an error -384/578 Test #128: landmark-warp-c-check-2 ............... Passed 0.04 sec 126: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-1.stdout.txt 126: -- REGEX is AVE *([-0-9.]*) 126: -- LOWER_THRESH is -992.0 @@ -19854,17 +19912,26 @@ 126: -- PARSED VALUE=|MIN -1000.000122 AVE -991.665894 MAX 0.000000 NONZERO 54484 NUMVOX 54872| 126: -- PARSED_VALUE=|-991.665894| 126: Not an error -385/578 Test #126: landmark-warp-c-check-1 ............... Passed 0.05 sec -132: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a-stats.stdout.txt -132: -- REGEX is AVE *([-0-9.]*) -132: -- LOWER_THRESH is -1000.1 -132: -- UPPER_THRESH is -999.9 -132: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| -132: -- PARSED_VALUE=|-1000.000000| -132: Not an error +128: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-2.stdout.txt +128: -- REGEX is Mean: *([-0-9.]*) +128: -- LOWER_THRESH is -1.6 +128: -- UPPER_THRESH is -1.5 +128: -- PARSED VALUE=|Mean: -1.562 0.019 0.000| +128: -- PARSED_VALUE=|-1.562| +128: Not an error 129: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 129: PARMS is lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha;-V;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha;-L;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv 129: EXPECTED_ERRNO is +387/578 Test #76: vf-gaussian-1 ......................... Passed 0.12 sec +388/578 Test #123: landmark-warp-b-check-2 ............... Passed 0.03 sec +389/578 Test #126: landmark-warp-c-check-1 ............... Passed 0.02 sec +390/578 Test #128: landmark-warp-c-check-2 ............... Passed 0.02 sec +test 147 + Start 147: plm-adjust-b-check + +147: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +147: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +147: Test timeout computed to be: 1500 test 150 Start 150: plm-adjust-c-check @@ -19877,37 +19944,33 @@ 153: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-782.97" "-DUPPER_THRESH=-782.96" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 153: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 153: Test timeout computed to be: 1500 -76: RETVAL: 0 -76: STDOUT: Setting header -76: Origin = -243.4211 -243.4211 -243.4211 -76: Size = 38 38 38 -76: Spacing = 13.1579 13.1579 13.1579 -76: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -76: Header was set -76: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha -76: -76: STDERR: -76: Not an error -386/578 Test #76: vf-gaussian-1 ......................... Passed 0.24 sec -387/578 Test #132: plm-add-a-check ....................... Passed 0.05 sec test 156 Start 156: plm-adjust-e-check 156: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-1298.87" "-DUPPER_THRESH=-1298.86" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 156: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 156: Test timeout computed to be: 1500 +132: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a-stats.stdout.txt +132: -- REGEX is AVE *([-0-9.]*) +132: -- LOWER_THRESH is -1000.1 +132: -- UPPER_THRESH is -999.9 +132: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| +132: -- PARSED_VALUE=|-1000.000000| +132: Not an error +391/578 Test #132: plm-add-a-check ....................... Passed 0.02 sec +135: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b-stats.stdout.txt +135: -- REGEX is AVE *([-0-9.]*) +135: -- LOWER_THRESH is -500.1 +135: -- UPPER_THRESH is -499.9 +135: -- PARSED VALUE=|MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872| +135: -- PARSED_VALUE=|-500.000000| +135: Not an error test 159 Start 159: plm-adjust-f-check 159: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.0196" "-DUPPER_THRESH=-0.0195" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 159: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 159: Test timeout computed to be: 1500 -69: RETVAL: 0 -69: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha -69: -69: STDERR: -69: Not an error -388/578 Test #69: xramp-1 ............................... Passed 0.32 sec 138: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a-stats.stdout.txt 138: -- REGEX is Mean: *([-0-9.]*) 138: -- LOWER_THRESH is 20.000 @@ -19915,15 +19978,6 @@ 138: -- PARSED VALUE=|Mean: 20.000 0.000 0.000| 138: -- PARSED_VALUE=|20.000| 138: Not an error -389/578 Test #138: plm-add-vf-a-check .................... Passed 0.05 sec -135: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b-stats.stdout.txt -135: -- REGEX is AVE *([-0-9.]*) -135: -- LOWER_THRESH is -500.1 -135: -- UPPER_THRESH is -499.9 -135: -- PARSED VALUE=|MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872| -135: -- PARSED_VALUE=|-500.000000| -135: Not an error -390/578 Test #135: plm-add-b-check ....................... Passed 0.06 sec 141: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b-stats.stdout.txt 141: -- REGEX is Mean: *([-0-9.]*) 141: -- LOWER_THRESH is 5.000 @@ -19931,12 +19985,16 @@ 141: -- PARSED VALUE=|Mean: 5.000 5.000 0.000| 141: -- PARSED_VALUE=|5.000| 141: Not an error -70: RETVAL: 0 -70: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha -70: -70: STDERR: -70: Not an error -391/578 Test #70: yramp-1 ............................... Passed 0.31 sec +144: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a-stats.stdout.txt +144: -- REGEX is AVE *([-0-9.]*) +144: -- LOWER_THRESH is -819.55 +144: -- UPPER_THRESH is -819.54 +144: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| +144: -- PARSED_VALUE=|-819.546265| +144: Not an error +392/578 Test #135: plm-add-b-check ....................... Passed 0.02 sec +393/578 Test #138: plm-add-vf-a-check .................... Passed 0.02 sec +394/578 Test #141: plm-add-vf-b-check .................... Passed 0.02 sec test 162 Start 162: plm-adjust-g-check @@ -19955,19 +20013,7 @@ 168: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-921.5941" "-DUPPER_THRESH=-921.5940" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 168: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 168: Test timeout computed to be: 1500 -test 171 - Start 171: plm-adjust-j-check - -171: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-921.6276" "-DUPPER_THRESH=-921.6274" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -171: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -171: Test timeout computed to be: 1500 -144: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a-stats.stdout.txt -144: -- REGEX is AVE *([-0-9.]*) -144: -- LOWER_THRESH is -819.55 -144: -- UPPER_THRESH is -819.54 -144: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| -144: -- PARSED_VALUE=|-819.546265| -144: Not an error +395/578 Test #144: plm-adjust-a-check .................... Passed 0.02 sec 147: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b-stats.stdout.txt 147: -- REGEX is AVE *([-0-9.]*) 147: -- LOWER_THRESH is -819.55 @@ -19975,6 +20021,19 @@ 147: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| 147: -- PARSED_VALUE=|-819.546265| 147: Not an error +396/578 Test #147: plm-adjust-b-check .................... Passed 0.02 sec +test 171 + Start 171: plm-adjust-j-check + +171: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-921.6276" "-DUPPER_THRESH=-921.6274" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +171: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +171: Test timeout computed to be: 1500 +test 174 + Start 174: plm-boundary-a-check + +174: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1056" "-DUPPER_THRESH=1056" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +174: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +174: Test timeout computed to be: 1500 150: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c-stats.stdout.txt 150: -- REGEX is AVE *([-0-9.]*) 150: -- LOWER_THRESH is -819.55 @@ -19982,16 +20041,30 @@ 150: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| 150: -- PARSED_VALUE=|-819.546265| 150: Not an error -392/578 Test #141: plm-add-vf-b-check .................... Passed 0.07 sec -393/578 Test #144: plm-adjust-a-check .................... Passed 0.06 sec -394/578 Test #147: plm-adjust-b-check .................... Passed 0.06 sec -395/578 Test #150: plm-adjust-c-check .................... Passed 0.06 sec -test 174 - Start 174: plm-boundary-a-check - -174: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1056" "-DUPPER_THRESH=1056" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -174: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -174: Test timeout computed to be: 1500 +397/578 Test #150: plm-adjust-c-check .................... Passed 0.02 sec +153: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d-stats.stdout.txt +153: -- REGEX is AVE *([-0-9.]*) +153: -- LOWER_THRESH is -782.97 +153: -- UPPER_THRESH is -782.96 +153: -- PARSED VALUE=|MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872| +153: -- PARSED_VALUE=|-782.961060| +153: Not an error +398/578 Test #153: plm-adjust-d-check .................... Passed 0.02 sec +156: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e-stats.stdout.txt +156: -- REGEX is AVE *([-0-9.]*) +156: -- LOWER_THRESH is -1298.87 +156: -- UPPER_THRESH is -1298.86 +156: -- PARSED VALUE=|MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872| +156: -- PARSED_VALUE=|-1298.865601| +156: Not an error +399/578 Test #156: plm-adjust-e-check .................... Passed 0.02 sec +159: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f-stats.stdout.txt +159: -- REGEX is AVE *([-0-9.]*) +159: -- LOWER_THRESH is -0.0196 +159: -- UPPER_THRESH is -0.0195 +159: -- PARSED VALUE=|MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872| +159: -- PARSED_VALUE=|-0.019504| +159: Not an error test 177 Start 177: plm-boundary-b-check @@ -20010,53 +20083,13 @@ 183: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=2.614" "-DUPPER_THRESH=2.615" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 183: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 183: Test timeout computed to be: 1500 -156: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e-stats.stdout.txt -156: -- REGEX is AVE *([-0-9.]*) -156: -- LOWER_THRESH is -1298.87 -156: -- UPPER_THRESH is -1298.86 -156: -- PARSED VALUE=|MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872| -156: -- PARSED_VALUE=|-1298.865601| -156: Not an error -396/578 Test #156: plm-adjust-e-check .................... Passed 0.06 sec -153: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d-stats.stdout.txt -153: -- REGEX is AVE *([-0-9.]*) -153: -- LOWER_THRESH is -782.97 -153: -- UPPER_THRESH is -782.96 -153: -- PARSED VALUE=|MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872| -153: -- PARSED_VALUE=|-782.961060| -153: Not an error -397/578 Test #153: plm-adjust-d-check .................... Passed 0.06 sec -71: RETVAL: 0 -71: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha -71: -71: STDERR: -71: Not an error -159: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f-stats.stdout.txt -159: -- REGEX is AVE *([-0-9.]*) -159: -- LOWER_THRESH is -0.0196 -159: -- UPPER_THRESH is -0.0195 -159: -- PARSED VALUE=|MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872| -159: -- PARSED_VALUE=|-0.019504| -159: Not an error +400/578 Test #159: plm-adjust-f-check .................... Passed 0.02 sec test 186 Start 186: plm-boundary-e-check 186: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=2.141" "-DUPPER_THRESH=2.143" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 186: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 186: Test timeout computed to be: 1500 -test 189 - Start 189: plm-convert-dicom-a-check - -189: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-stats.stdout.txt" "-DREGEX= 0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -189: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -189: Test timeout computed to be: 1500 -26: RETVAL: 0 -26: STDOUT: Doing extraction -26: Keyholizing structure 0. -26: Write: DoseGridScaling = 0.000000 -26: -26: STDERR: -26: Not an error 162: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g-stats.stdout.txt 162: -- REGEX is AVE *([-0-9.]*) 162: -- LOWER_THRESH is -0.0001 @@ -20064,6 +20097,7 @@ 162: -- PARSED VALUE=|MIN -0.025301 AVE -0.000000 MAX 0.287606 NONZERO 54872 NUMVOX 54872| 162: -- PARSED_VALUE=|-0.000000| 162: Not an error +401/578 Test #162: plm-adjust-g-check .................... Passed 0.02 sec 165: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h-stats.stdout.txt 165: -- REGEX is AVE *([-0-9.]*) 165: -- LOWER_THRESH is -0.2481 @@ -20071,11 +20105,21 @@ 165: -- PARSED VALUE=|MIN -0.283680 AVE -0.248078 MAX 0.156631 NONZERO 54872 NUMVOX 54872| 165: -- PARSED_VALUE=|-0.248078| 165: Not an error -398/578 Test #26: pat-1 ................................. Passed 0.53 sec -399/578 Test #71: zramp-1 ............................... Passed 0.33 sec -400/578 Test #159: plm-adjust-f-check .................... Passed 0.06 sec -401/578 Test #162: plm-adjust-g-check .................... Passed 0.05 sec -402/578 Test #165: plm-adjust-h-check .................... Passed 0.04 sec +402/578 Test #165: plm-adjust-h-check .................... Passed 0.02 sec +168: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-stats.stdout.txt +168: -- REGEX is AVE *([-0-9.]*) +168: -- LOWER_THRESH is -921.5941 +168: -- UPPER_THRESH is -921.5940 +168: -- PARSED VALUE=|MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872| +168: -- PARSED_VALUE=|-921.594055| +168: Not an error +403/578 Test #168: plm-adjust-i-check .................... Passed 0.02 sec +test 189 + Start 189: plm-convert-dicom-a-check + +189: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-stats.stdout.txt" "-DREGEX= 0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +189: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +189: Test timeout computed to be: 1500 test 192 Start 192: plm-convert-dicom-b-check @@ -20088,12 +20132,51 @@ 195: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=280" "-DUPPER_THRESH=280" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 195: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 195: Test timeout computed to be: 1500 +171: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt +171: -- REGEX is AVE *([-0-9.]*) +171: -- LOWER_THRESH is -921.6276 +171: -- UPPER_THRESH is -921.6274 +171: -- PARSED VALUE=|MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872| +171: -- PARSED_VALUE=|-921.627502| +171: Not an error +404/578 Test #171: plm-adjust-j-check .................... Passed 0.02 sec +174: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt +174: -- REGEX is NONZERO *([-0-9.]*) +174: -- LOWER_THRESH is 1056 +174: -- UPPER_THRESH is 1056 +174: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| +174: -- PARSED_VALUE=|1056| +174: Not an error test 196 Start 196: plm-convert-dicom-d 196: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-d.nrrd" "-DEXPECTED_ERRNO=1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 196: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 196: Test timeout computed to be: 1500 +177: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b-stats.stdout.txt +177: -- REGEX is NONZERO *([-0-9.]*) +177: -- LOWER_THRESH is 1056 +177: -- UPPER_THRESH is 1056 +177: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| +177: -- PARSED_VALUE=|1056| +177: Not an error +180: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c-stats.stdout.txt +180: -- REGEX is NONZERO *([-0-9.]*) +180: -- LOWER_THRESH is 840 +180: -- UPPER_THRESH is 840 +180: -- PARSED VALUE=|MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000| +180: -- PARSED_VALUE=|840| +180: Not an error +183: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d-stats.stdout.txt +183: -- REGEX is AVE *([-0-9.]*) +183: -- LOWER_THRESH is 2.614 +183: -- UPPER_THRESH is 2.615 +183: -- PARSED VALUE=|MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000| +183: -- PARSED_VALUE=|2.614500| +183: Not an error +405/578 Test #174: plm-boundary-a-check .................. Passed 0.02 sec +406/578 Test #177: plm-boundary-b-check .................. Passed 0.02 sec +407/578 Test #180: plm-boundary-c-check .................. Passed 0.02 sec test 197 Start 197: plm-convert-dicom-e @@ -20106,52 +20189,13 @@ 198: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-f-dicom;--referenced-ct;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 198: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 198: Test timeout computed to be: 1500 -168: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-stats.stdout.txt -168: -- REGEX is AVE *([-0-9.]*) -168: -- LOWER_THRESH is -921.5941 -168: -- UPPER_THRESH is -921.5940 -168: -- PARSED VALUE=|MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872| -168: -- PARSED_VALUE=|-921.594055| -168: Not an error -403/578 Test #168: plm-adjust-i-check .................... Passed 0.06 sec test 201 Start 201: plm-convert-dicom-donut-a-check 201: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=2623" "-DUPPER_THRESH=2623" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 201: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 201: Test timeout computed to be: 1500 -180: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c-stats.stdout.txt -180: -- REGEX is NONZERO *([-0-9.]*) -180: -- LOWER_THRESH is 840 -180: -- UPPER_THRESH is 840 -180: -- PARSED VALUE=|MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000| -180: -- PARSED_VALUE=|840| -180: Not an error -404/578 Test #180: plm-boundary-c-check .................. Passed 0.05 sec -171: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt -171: -- REGEX is AVE *([-0-9.]*) -171: -- LOWER_THRESH is -921.6276 -171: -- UPPER_THRESH is -921.6274 -171: -- PARSED VALUE=|MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872| -171: -- PARSED_VALUE=|-921.627502| -171: Not an error -405/578 Test #171: plm-adjust-j-check .................... Passed 0.06 sec -174: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt -174: -- REGEX is NONZERO *([-0-9.]*) -174: -- LOWER_THRESH is 1056 -174: -- UPPER_THRESH is 1056 -174: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| -174: -- PARSED_VALUE=|1056| -174: Not an error -406/578 Test #174: plm-boundary-a-check .................. Passed 0.06 sec -177: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b-stats.stdout.txt -177: -- REGEX is NONZERO *([-0-9.]*) -177: -- LOWER_THRESH is 1056 -177: -- UPPER_THRESH is 1056 -177: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| -177: -- PARSED_VALUE=|1056| -177: Not an error -407/578 Test #177: plm-boundary-b-check .................. Passed 0.05 sec +408/578 Test #183: plm-boundary-d-check .................. Passed 0.02 sec 186: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e-stats.stdout.txt 186: -- REGEX is AVE *([-0-9.]*) 186: -- LOWER_THRESH is 2.141 @@ -20159,15 +20203,12 @@ 186: -- PARSED VALUE=|MIN 0.000000 AVE 2.142000 MAX 56.000000 NONZERO 840 NUMVOX 8000| 186: -- PARSED_VALUE=|2.142000| 186: Not an error -408/578 Test #186: plm-boundary-e-check .................. Passed 0.04 sec -183: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d-stats.stdout.txt -183: -- REGEX is AVE *([-0-9.]*) -183: -- LOWER_THRESH is 2.614 -183: -- UPPER_THRESH is 2.615 -183: -- PARSED VALUE=|MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000| -183: -- PARSED_VALUE=|2.614500| -183: Not an error -409/578 Test #183: plm-boundary-d-check .................. Passed 0.05 sec +test 204 + Start 204: plm-convert-dicom-donut-b-check + +204: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1924" "-DUPPER_THRESH=1924" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +204: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +204: Test timeout computed to be: 1500 189: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-stats.stdout.txt 189: -- REGEX is 0 *NVOX *([-0-9.]*) 189: -- LOWER_THRESH is 1648003 @@ -20175,49 +20216,6 @@ 189: -- PARSED VALUE=|S 0 NVOX 1648003| 189: -- PARSED_VALUE=|1648003| 189: Not an error -410/578 Test #189: plm-convert-dicom-a-check ............. Passed 0.04 sec -test 204 - Start 204: plm-convert-dicom-donut-b-check - -204: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1924" "-DUPPER_THRESH=1924" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -204: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -204: Test timeout computed to be: 1500 -test 205 - Start 205: plm-convert-dicom-donut-c - -205: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-c" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -205: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -205: Test timeout computed to be: 1500 -test 208 - Start 208: plm-convert-cxt-check - -208: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -208: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -208: Test timeout computed to be: 1500 -test 212 - Start 212: plm-convert-dose-scale-check - -212: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=77.699" "-DUPPER_THRESH=77.7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -212: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -212: Test timeout computed to be: 1500 -test 215 - Start 215: plm-crop-a-check-1 - -215: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=11 16 3" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" -215: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -215: Test timeout computed to be: 1500 -test 218 - Start 218: plm-crop-b-check-1 - -218: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=19 11 4" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" -218: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -218: Test timeout computed to be: 1500 -test 221 - Start 221: plm-crop-c-check-1 - -221: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=15 15 15" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" -221: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -221: Test timeout computed to be: 1500 192: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-stats.stdout.txt 192: -- REGEX is Patient Position . (.*[^ ]) *$ 192: -- MATCH_STRING is FFS @@ -20233,6 +20231,22 @@ 195: -- PARSED VALUE=|MIN 0.000000 AVE 0.000280 MAX 1.000000 NONZERO 280 NUMVOX 1000000| 195: -- PARSED_VALUE=|280| 195: Not an error +409/578 Test #186: plm-boundary-e-check .................. Passed 0.02 sec +410/578 Test #189: plm-convert-dicom-a-check ............. Passed 0.02 sec +test 205 + Start 205: plm-convert-dicom-donut-c + +205: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-c" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +205: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +205: Test timeout computed to be: 1500 +test 208 + Start 208: plm-convert-cxt-check + +208: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +208: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +208: Test timeout computed to be: 1500 +411/578 Test #192: plm-convert-dicom-b-check ............. Passed 0.03 sec +412/578 Test #195: plm-convert-dicom-c-check ............. Passed 0.03 sec 196: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 196: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-d.nrrd 196: EXPECTED_ERRNO is 1 @@ -20242,6 +20256,18 @@ 198: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 198: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-f-dicom;--referenced-ct;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom 198: EXPECTED_ERRNO is +test 212 + Start 212: plm-convert-dose-scale-check + +212: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=77.699" "-DUPPER_THRESH=77.7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +212: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +212: Test timeout computed to be: 1500 +test 215 + Start 215: plm-crop-a-check-1 + +215: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=11 16 3" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" +215: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +215: Test timeout computed to be: 1500 201: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-stats.stdout.txt 201: -- REGEX is S *0 *NVOX *([-0-9.]*) 201: -- LOWER_THRESH is 2623 @@ -20256,9 +20282,23 @@ 204: -- PARSED VALUE=|S 0 NVOX 1924| 204: -- PARSED_VALUE=|1924| 204: Not an error +413/578 Test #201: plm-convert-dicom-donut-a-check ....... Passed 0.02 sec +test 218 + Start 218: plm-crop-b-check-1 + +218: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=19 11 4" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" +218: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +218: Test timeout computed to be: 1500 +414/578 Test #204: plm-convert-dicom-donut-b-check ....... Passed 0.03 sec 205: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 205: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--input-ss-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-c 205: EXPECTED_ERRNO is +test 221 + Start 221: plm-crop-c-check-1 + +221: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=15 15 15" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" +221: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +221: Test timeout computed to be: 1500 208: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt-stats.stdout.txt 208: -- REGEX is S *0 *NVOX *([-0-9.]*) 208: -- LOWER_THRESH is 1648003 @@ -20266,6 +20306,21 @@ 208: -- PARSED VALUE=|S 0 NVOX 1648003| 208: -- PARSED_VALUE=|1648003| 208: Not an error +415/578 Test #208: plm-convert-cxt-check ................. Passed 0.02 sec +test 223 + Start 223: plm-dice-a-check-1 + +223: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-a.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.799" "-DUPPER_THRESH=0.801" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +223: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +223: Test timeout computed to be: 1500 +215: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt +215: -- REGEX is ^Size = (.*)$ +215: -- MATCH_STRING is 11 16 3 +215: -- PARSED VALUE=|Size = 11 16 3| +215: -- PARSED_VALUE=|11 16 3| +215: -- LENGTH=7 +215: -- |11 16 3|11 16 3| +215: Not an error 212: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale-stats.stdout.txt 212: -- REGEX is MAX *([-0-9.]*) 212: -- LOWER_THRESH is 77.699 @@ -20273,18 +20328,8 @@ 212: -- PARSED VALUE=|MIN 0.000000 AVE 0.294533 MAX 77.699997 NONZERO 208 NUMVOX 54872| 212: -- PARSED_VALUE=|77.699997| 212: Not an error -411/578 Test #192: plm-convert-dicom-b-check ............. Passed 0.07 sec -412/578 Test #195: plm-convert-dicom-c-check ............. Passed 0.06 sec -413/578 Test #201: plm-convert-dicom-donut-a-check ....... Passed 0.05 sec -414/578 Test #204: plm-convert-dicom-donut-b-check ....... Passed 0.04 sec -415/578 Test #208: plm-convert-cxt-check ................. Passed 0.04 sec -416/578 Test #212: plm-convert-dose-scale-check .......... Passed 0.03 sec -test 223 - Start 223: plm-dice-a-check-1 - -223: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-a.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.799" "-DUPPER_THRESH=0.801" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -223: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -223: Test timeout computed to be: 1500 +416/578 Test #212: plm-convert-dose-scale-check .......... Passed 0.02 sec +417/578 Test #215: plm-crop-a-check-1 .................... Passed 0.02 sec test 225 Start 225: plm-dice-b-check-1 @@ -20297,24 +20342,6 @@ 227: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=26.31" "-DUPPER_THRESH=26.32" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 227: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 227: Test timeout computed to be: 1500 -test 228 - Start 228: plm-dice-c-check-2 - -228: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=3.40" "-DUPPER_THRESH=3.41" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -228: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -228: Test timeout computed to be: 1500 -test 229 - Start 229: plm-dice-c-check-3 - -229: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=7.11" "-DUPPER_THRESH=7.12" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -229: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -229: Test timeout computed to be: 1500 -test 230 - Start 230: plm-dice-c-check-4 - -230: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Max average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=8.53" "-DUPPER_THRESH=8.54" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -230: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -230: Test timeout computed to be: 1500 218: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b-stats.stdout.txt 218: -- REGEX is ^Size = (.*)$ 218: -- MATCH_STRING is 19 11 4 @@ -20323,6 +20350,7 @@ 218: -- LENGTH=7 218: -- |19 11 4|19 11 4| 218: Not an error +418/578 Test #218: plm-crop-b-check-1 .................... Passed 0.02 sec 221: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c-stats.stdout.txt 221: -- REGEX is ^Size = (.*)$ 221: -- MATCH_STRING is 15 15 15 @@ -20331,29 +20359,12 @@ 221: -- LENGTH=8 221: -- |15 15 15|15 15 15| 221: Not an error -215: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt -215: -- REGEX is ^Size = (.*)$ -215: -- MATCH_STRING is 11 16 3 -215: -- PARSED VALUE=|Size = 11 16 3| -215: -- PARSED_VALUE=|11 16 3| -215: -- LENGTH=7 -215: -- |11 16 3|11 16 3| -215: Not an error -417/578 Test #218: plm-crop-b-check-1 .................... Passed 0.05 sec -418/578 Test #221: plm-crop-c-check-1 .................... Passed 0.05 sec -test 231 - Start 231: plm-dice-c-check-5 - -231: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Percent .* \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=26.31" "-DUPPER_THRESH=26.32" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -231: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -231: Test timeout computed to be: 1500 -test 233 - Start 233: plm-dice-d-check-1 +test 228 + Start 228: plm-dice-c-check-2 -233: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=45.575" "-DUPPER_THRESH=45.585" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -233: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -233: Test timeout computed to be: 1500 -419/578 Test #215: plm-crop-a-check-1 .................... Passed 0.06 sec +228: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=3.40" "-DUPPER_THRESH=3.41" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +228: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +228: Test timeout computed to be: 1500 223: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-a.stdout.txt 223: -- REGEX is ^DICE: *([-0-9.]*) 223: -- LOWER_THRESH is 0.799 @@ -20361,7 +20372,20 @@ 223: -- PARSED VALUE=|DICE: 0.800000| 223: -- PARSED_VALUE=|0.800000| 223: Not an error -420/578 Test #223: plm-dice-a-check-1 .................... Passed 0.04 sec +419/578 Test #221: plm-crop-c-check-1 .................... Passed 0.02 sec +420/578 Test #223: plm-dice-a-check-1 .................... Passed 0.01 sec +test 229 + Start 229: plm-dice-c-check-3 + +229: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=7.11" "-DUPPER_THRESH=7.12" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +229: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +229: Test timeout computed to be: 1500 +test 230 + Start 230: plm-dice-c-check-4 + +230: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Max average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=8.53" "-DUPPER_THRESH=8.54" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +230: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +230: Test timeout computed to be: 1500 225: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-b.stdout.txt 225: -- REGEX is ^DICE: *([-0-9.]*) 225: -- LOWER_THRESH is 0.999 @@ -20369,95 +20393,145 @@ 225: -- PARSED VALUE=|DICE: 1.000000| 225: -- PARSED_VALUE=|1.000000| 225: Not an error -421/578 Test #225: plm-dice-b-check-1 .................... Passed 0.04 sec +421/578 Test #225: plm-dice-b-check-1 .................... Passed 0.02 sec 227: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 227: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 227: -- LOWER_THRESH is 26.31 227: -- UPPER_THRESH is 26.32 +test 231 + Start 231: plm-dice-c-check-5 + +231: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Percent .* \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=26.31" "-DUPPER_THRESH=26.32" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +231: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +231: Test timeout computed to be: 1500 227: -- PARSED VALUE=|Hausdorff distance = 26.315790| 227: -- PARSED_VALUE=|26.315790| 227: Not an error +422/578 Test #227: plm-dice-c-check-1 .................... Passed 0.02 sec +test 233 + Start 233: plm-dice-d-check-1 + +233: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=45.575" "-DUPPER_THRESH=45.585" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +233: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +233: Test timeout computed to be: 1500 +228: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt +228: -- REGEX is ^Avg average Hausdorff distance = *([-0-9.]*) +228: -- LOWER_THRESH is 3.40 +228: -- UPPER_THRESH is 3.41 +228: -- PARSED VALUE=|Avg average Hausdorff distance = 3.406955| +228: -- PARSED_VALUE=|3.406955| +228: Not an error +423/578 Test #228: plm-dice-c-check-2 .................... Passed 0.01 sec test 234 Start 234: plm-dice-d-check-2 234: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Avg average Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=7.07" "-DUPPER_THRESH=7.08" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 234: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 234: Test timeout computed to be: 1500 +229: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt +229: -- REGEX is ^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*) +229: -- LOWER_THRESH is 7.11 +229: -- UPPER_THRESH is 7.12 +229: -- PARSED VALUE=|Avg average Hausdorff distance (boundary) = 7.115030| +229: -- PARSED_VALUE=|7.115030| +229: Not an error +424/578 Test #229: plm-dice-c-check-3 .................... Passed 0.01 sec +230: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt +230: -- REGEX is ^Max average Hausdorff distance \(boundary\) = *([-0-9.]*) +230: -- LOWER_THRESH is 8.53 +230: -- UPPER_THRESH is 8.54 +230: -- PARSED VALUE=|Max average Hausdorff distance (boundary) = 8.534851| +230: -- PARSED_VALUE=|8.534851| +230: Not an error test 235 Start 235: plm-dice-d-check-3 235: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=14.89" "-DUPPER_THRESH=14.90" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 235: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 235: Test timeout computed to be: 1500 +129: RETVAL: 0 +129: STDOUT: Hello world +129: Gonna convert pointsets +129: Pointset: +129: rect-2-0 -26.271700 -52.162899 46.052799 +129: rect-2-1 65.870201 -52.543598 46.053001 +129: rect-2-2 65.870201 52.543900 46.053001 +129: rect-2-3 -25.510201 53.686199 46.053001 +129: rect-2-4 -25.891001 -52.162899 -46.052502 +129: rect-2-5 66.631699 -53.305099 -46.053001 +129: rect-2-6 65.870201 53.305401 -46.053001 +129: rect-2-7 -25.129499 53.686199 -46.053001 +129: Conversion complete. +129: -26.2717 -52.1629 46.0528 +129: 65.8702 -52.5436 46.053 +129: 65.8702 52.5439 46.053 +129: -25.5102 53.6862 46.053 +129: -25.891 -52.1629 -46.0525 +129: 66.6317 -53.3051 -46.053 +129: 65.8702 53.3054 -46.053 +129: -25.1295 53.6862 -46.053 +129: Setting landmarks to TPS +129: Computing matrix +129: Setting xform +129: Converting to VF +129: Warping... +129: landmark 0 err 0.796775 mm +129: landmark 1 err 0.857190 mm +129: landmark 2 err 0.875645 mm +129: landmark 3 err 0.888102 mm +129: landmark 4 err 0.831617 mm +129: landmark 5 err 0.807000 mm +129: landmark 6 err 1.057389 mm +129: landmark 7 err 1.167740 mm +129: landmark RMS err 0.918533 mm +129: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha +129: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha +129: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv +129: +129: STDERR: +129: Not an error +425/578 Test #230: plm-dice-c-check-4 .................... Passed 0.02 sec +426/578 Test #129: landmark-warp-d ....................... Passed 0.13 sec +231: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt +231: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) +231: -- LOWER_THRESH is 26.31 +231: -- UPPER_THRESH is 26.32 +231: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 26.315790| +231: -- PARSED_VALUE=|26.315790| +231: Not an error +427/578 Test #231: plm-dice-c-check-5 .................... Passed 0.02 sec +233: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt +233: -- REGEX is ^Hausdorff distance = *([-0-9.]*) +233: -- LOWER_THRESH is 45.575 +233: -- UPPER_THRESH is 45.585 +233: -- PARSED VALUE=|Hausdorff distance = 45.580288| +233: -- PARSED_VALUE=|45.580288| +233: Not an error test 236 Start 236: plm-dice-d-check-4 236: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Max average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=18.38" "-DUPPER_THRESH=18.39" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 236: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 236: Test timeout computed to be: 1500 -422/578 Test #227: plm-dice-c-check-1 .................... Passed 0.04 sec test 237 Start 237: plm-dice-d-check-5 237: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Percent .* \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=32.89" "-DUPPER_THRESH=32.90" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 237: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 237: Test timeout computed to be: 1500 -229: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt -229: -- REGEX is ^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*) -229: -- LOWER_THRESH is 7.11 -229: -- UPPER_THRESH is 7.12 -229: -- PARSED VALUE=|Avg average Hausdorff distance (boundary) = 7.115030| -229: -- PARSED_VALUE=|7.115030| -229: Not an error -423/578 Test #229: plm-dice-c-check-3 .................... Passed 0.04 sec -231: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt -231: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) -231: -- LOWER_THRESH is 26.31 -231: -- UPPER_THRESH is 26.32 -231: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 26.315790| -231: -- PARSED_VALUE=|26.315790| -231: Not an error test 239 Start 239: plm-dice-e-check-1 239: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.96550" "-DUPPER_THRESH=0.96554" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 239: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 239: Test timeout computed to be: 1500 -228: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt -228: -- REGEX is ^Avg average Hausdorff distance = *([-0-9.]*) -228: -- LOWER_THRESH is 3.40 -228: -- UPPER_THRESH is 3.41 -228: -- PARSED VALUE=|Avg average Hausdorff distance = 3.406955| -228: -- PARSED_VALUE=|3.406955| -228: Not an error -230: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt -230: -- REGEX is ^Max average Hausdorff distance \(boundary\) = *([-0-9.]*) -230: -- LOWER_THRESH is 8.53 -230: -- UPPER_THRESH is 8.54 -230: -- PARSED VALUE=|Max average Hausdorff distance (boundary) = 8.534851| -230: -- PARSED_VALUE=|8.534851| -230: Not an error -424/578 Test #228: plm-dice-c-check-2 .................... Passed 0.05 sec -425/578 Test #231: plm-dice-c-check-5 .................... Passed 0.03 sec +428/578 Test #233: plm-dice-d-check-1 .................... Passed 0.02 sec test 240 Start 240: plm-dice-e-check-2 240: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=5" "-DUPPER_THRESH=5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 240: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 240: Test timeout computed to be: 1500 -test 242 - Start 242: plm-dice-f-check-1 - -242: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=1" "-DUPPER_THRESH=1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -242: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -242: Test timeout computed to be: 1500 -233: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt -233: -- REGEX is ^Hausdorff distance = *([-0-9.]*) -233: -- LOWER_THRESH is 45.575 -233: -- UPPER_THRESH is 45.585 -233: -- PARSED VALUE=|Hausdorff distance = 45.580288| -233: -- PARSED_VALUE=|45.580288| -233: Not an error 234: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 234: -- REGEX is ^Avg average Hausdorff distance = *([-0-9.]*) 234: -- LOWER_THRESH is 7.07 @@ -20465,6 +20539,7 @@ 234: -- PARSED VALUE=|Avg average Hausdorff distance = 7.072703| 234: -- PARSED_VALUE=|7.072703| 234: Not an error +429/578 Test #234: plm-dice-d-check-2 .................... Passed 0.02 sec 235: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 235: -- REGEX is ^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*) 235: -- LOWER_THRESH is 14.89 @@ -20472,13 +20547,19 @@ 235: -- PARSED VALUE=|Avg average Hausdorff distance (boundary) = 14.894061| 235: -- PARSED_VALUE=|14.894061| 235: Not an error -237: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt -237: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) -237: -- LOWER_THRESH is 32.89 -237: -- UPPER_THRESH is 32.90 -237: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 32.894737| -237: -- PARSED_VALUE=|32.894737| -237: Not an error +test 242 + Start 242: plm-dice-f-check-1 + +242: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=1" "-DUPPER_THRESH=1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +242: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +242: Test timeout computed to be: 1500 +430/578 Test #235: plm-dice-d-check-3 .................... Passed 0.02 sec +test 243 + Start 243: plm-dice-f-check-2 + +243: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=0" "-DUPPER_THRESH=0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +243: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +243: Test timeout computed to be: 1500 236: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 236: -- REGEX is ^Max average Hausdorff distance \(boundary\) = *([-0-9.]*) 236: -- LOWER_THRESH is 18.38 @@ -20486,22 +20567,34 @@ 236: -- PARSED VALUE=|Max average Hausdorff distance (boundary) = 18.384613| 236: -- PARSED_VALUE=|18.384613| 236: Not an error -426/578 Test #230: plm-dice-c-check-4 .................... Passed 0.05 sec -427/578 Test #233: plm-dice-d-check-1 .................... Passed 0.04 sec -428/578 Test #234: plm-dice-d-check-2 .................... Passed 0.03 sec -429/578 Test #235: plm-dice-d-check-3 .................... Passed 0.03 sec -test 243 - Start 243: plm-dice-f-check-2 - -243: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=0" "-DUPPER_THRESH=0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -243: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -243: Test timeout computed to be: 1500 +237: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt +237: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) +237: -- LOWER_THRESH is 32.89 +237: -- UPPER_THRESH is 32.90 +196: RETVAL: 1 +237: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 32.894737| +196: STDOUT: Could not open input file /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/ for read +196: +196: STDERR: +237: -- PARSED_VALUE=|32.894737| +237: Not an error +431/578 Test #236: plm-dice-d-check-4 .................... Passed 0.01 sec test 244 Start 244: plm-dmap-a 244: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;maurer;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 244: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 244: Test timeout computed to be: 1500 +196: Not an error +239: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt +239: -- REGEX is ^DICE: *([-0-9.]*) +239: -- LOWER_THRESH is 0.96550 +239: -- UPPER_THRESH is 0.96554 +239: -- PARSED VALUE=|DICE: 0.965517| +239: -- PARSED_VALUE=|0.965517| +239: Not an error +432/578 Test #196: plm-convert-dicom-d ................... Passed 0.09 sec +433/578 Test #237: plm-dice-d-check-5 .................... Passed 0.02 sec test 246 Start 246: plm-dmap-c @@ -20514,47 +20607,6 @@ 248: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-DREGEX=^15,([-0-9.]*)," "-DLOWER_THRESH=0.999" "-DUPPER_THRESH=1.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 248: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 248: Test timeout computed to be: 1500 -129: RETVAL: 0 -129: STDOUT: Hello world -129: Gonna convert pointsets -129: Pointset: -129: rect-2-0 -26.271700 -52.162899 46.052799 -129: rect-2-1 65.870201 -52.543598 46.053001 -129: rect-2-2 65.870201 52.543900 46.053001 -129: rect-2-3 -25.510201 53.686199 46.053001 -129: rect-2-4 -25.891001 -52.162899 -46.052502 -129: rect-2-5 66.631699 -53.305099 -46.053001 -129: rect-2-6 65.870201 53.305401 -46.053001 -129: rect-2-7 -25.129499 53.686199 -46.053001 -129: Conversion complete. -129: -26.2717 -52.1629 46.0528 -129: 65.8702 -52.5436 46.053 -129: 65.8702 52.5439 46.053 -129: -25.5102 53.6862 46.053 -129: -25.891 -52.1629 -46.0525 -129: 66.6317 -53.3051 -46.053 -129: 65.8702 53.3054 -46.053 -129: -25.1295 53.6862 -46.053 -129: Setting landmarks to TPS -129: Computing matrix -129: Setting xform -129: Converting to VF -129: Warping... -129: landmark 0 err 0.796775 mm -129: landmark 1 err 0.857190 mm -129: landmark 2 err 0.875645 mm -129: landmark 3 err 0.888102 mm -129: landmark 4 err 0.831617 mm -129: landmark 5 err 0.807000 mm -129: landmark 6 err 1.057389 mm -129: landmark 7 err 1.167740 mm -129: landmark RMS err 0.918533 mm -129: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha -129: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha -129: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv -129: -129: STDERR: -129: Not an error 240: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt 240: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 240: -- LOWER_THRESH is 5 @@ -20562,17 +20614,23 @@ 240: -- PARSED VALUE=|Hausdorff distance = 5.000000| 240: -- PARSED_VALUE=|5.000000| 240: Not an error -239: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt -239: -- REGEX is ^DICE: *([-0-9.]*) -239: -- LOWER_THRESH is 0.96550 -239: -- UPPER_THRESH is 0.96554 -239: -- PARSED VALUE=|DICE: 0.965517| -239: -- PARSED_VALUE=|0.965517| -239: Not an error -430/578 Test #129: landmark-warp-d ....................... Passed 0.28 sec -431/578 Test #236: plm-dice-d-check-4 .................... Passed 0.05 sec -432/578 Test #237: plm-dice-d-check-5 .................... Passed 0.04 sec -433/578 Test #240: plm-dice-e-check-2 .................... Passed 0.03 sec +242: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt +242: -- REGEX is ^DICE: *([-0-9.]*) +242: -- LOWER_THRESH is 1 +242: -- UPPER_THRESH is 1 +242: -- PARSED VALUE=|DICE: 1.000000| +242: -- PARSED_VALUE=|1.000000| +242: Not an error +434/578 Test #239: plm-dice-e-check-1 .................... Passed 0.02 sec +435/578 Test #240: plm-dice-e-check-2 .................... Passed 0.02 sec +436/578 Test #242: plm-dice-f-check-1 .................... Passed 0.01 sec +243: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt +243: -- REGEX is ^Hausdorff distance = *([-0-9.]*) +243: -- LOWER_THRESH is 0 +243: -- UPPER_THRESH is 0 +243: -- PARSED VALUE=|Hausdorff distance = 0.000000| +243: -- PARSED_VALUE=|0.000000| +243: Not an error test 249 Start 249: plm-dvh-a-check-2 @@ -20591,29 +20649,16 @@ 252: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-DREGEX=^15.5,([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.001" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 252: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 252: Test timeout computed to be: 1500 +244: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +244: PARMS is dmap;--algorithm;maurer;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha +244: EXPECTED_ERRNO is +437/578 Test #243: plm-dice-f-check-2 .................... Passed 0.02 sec test 254 Start 254: plm-dvh-c-check-1 254: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-DREGEX=^15,([-0-9.]*)" "-DLOWER_THRESH=0.780" "-DUPPER_THRESH=0.783" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 254: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 254: Test timeout computed to be: 1500 -242: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt -242: -- REGEX is ^DICE: *([-0-9.]*) -242: -- LOWER_THRESH is 1 -242: -- UPPER_THRESH is 1 -242: -- PARSED VALUE=|DICE: 1.000000| -242: -- PARSED_VALUE=|1.000000| -242: Not an error -243: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt -243: -- REGEX is ^Hausdorff distance = *([-0-9.]*) -243: -- LOWER_THRESH is 0 -243: -- UPPER_THRESH is 0 -243: -- PARSED VALUE=|Hausdorff distance = 0.000000| -243: -- PARSED_VALUE=|0.000000| -243: Not an error -244: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -244: PARMS is dmap;--algorithm;maurer;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha -244: EXPECTED_ERRNO is 246: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 246: PARMS is dmap;--algorithm;song_maurer;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha 246: EXPECTED_ERRNO is @@ -20624,22 +20669,154 @@ 248: -- PARSED VALUE=|15,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0| 248: -- PARSED_VALUE=|1| 248: Not an error -434/578 Test #239: plm-dice-e-check-1 .................... Passed 0.06 sec -435/578 Test #242: plm-dice-f-check-1 .................... Passed 0.05 sec -436/578 Test #243: plm-dice-f-check-2 .................... Passed 0.04 sec -437/578 Test #248: plm-dvh-a-check-1 ..................... Passed 0.03 sec +438/578 Test #248: plm-dvh-a-check-1 ..................... Passed 0.01 sec test 255 Start 255: plm-dvh-c-check-2 255: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-DREGEX=^15.5,([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.001" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 255: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 255: Test timeout computed to be: 1500 +249: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv +249: -- REGEX is ^15.5,([-0-9.]*), +249: -- LOWER_THRESH is 0.0 +249: -- UPPER_THRESH is 0.001 +249: -- PARSED VALUE=|15.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0| +249: -- PARSED_VALUE=|0| +249: Not an error +439/578 Test #249: plm-dvh-a-check-2 ..................... Passed 0.01 sec test 258 Start 258: plm-fill-a-check 258: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.1" "-DUPPER_THRESH=+0.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 258: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 258: Test timeout computed to be: 1500 +251: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv +251: -- REGEX is ^15,([-0-9.]*) +251: -- LOWER_THRESH is 0.999 +251: -- UPPER_THRESH is 1.0 +251: -- PARSED VALUE=|15,1| +251: -- PARSED_VALUE=|1| +251: Not an error +252: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv +252: -- REGEX is ^15.5,([-0-9.]*) +252: -- LOWER_THRESH is 0.0 +252: -- UPPER_THRESH is 0.001 +252: -- PARSED VALUE=|15.5,0| +252: -- PARSED_VALUE=|0| +252: Not an error +198: RETVAL: 0 +198: STDOUT: Loading RDD +198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT +198: Found DCM_ReferencedFrameOfReferenceSequence! +198: Found DCM_RTReferencedStudySequence! +198: Trying to load rt dose. +198: Load: DoseGridScaling = 0.000000 +198: RTDOSE: dim = 38 38 38 +198: ipp = -243.421005 -243.421005 -243.421005 +198: spc = 13.157900 13.157900 13.157900 +198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +198: Bits_alloc: 32 +198: Bits_stored: 32 +198: High_bit: 31 +198: Pixel_rep: 0 +198: rc = 1, length = 109744, npix = 54872 +198: Trying to load rt structure set. +198: Adding structure (1), Foreground +198: Structure 1 has color 255\0\0 +198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT +198: Found DCM_ReferencedFrameOfReferenceSequence! +198: Found DCM_RTReferencedStudySequence! +198: Trying to load rt dose. +198: Load: DoseGridScaling = 0.000000 +198: RTDOSE: dim = 38 38 38 +198: ipp = -243.421005 -243.421005 -243.421005 +198: spc = 13.157900 13.157900 13.157900 +198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +198: Bits_alloc: 32 +198: Bits_stored: 32 +198: High_bit: 31 +198: Pixel_rep: 0 +198: rc = 1, length = 109744, npix = 54872 +198: Trying to load rt structure set. +198: Adding structure (1), Foreground +198: Structure 1 has color 255\0\0 +198: Loading RDD complete +198: date_string: 20250907 +198: description_string: +198: referring_physician_name_string: +198: accession_number_string: +198: time_string: 044647 +198: study_id_string: +198: position_reference_indicator_string: +198: ct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957656 +198: dose_instance_uid: +198: dose_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.393117.1757170016.367992 +198: plan_instance_uid: +198: rtstruct_instance_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957654 +198: rtstruct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.393117.1757170016.367993 +198: study_metadata: +198: Metadata +198: 0008,0052 | 1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957637 +198: 0010,0010 | RECT^SYNTH +198: 0010,0020 | RECT-SYNTH +198: 0010,0040 | O +198: 0018,5100 | HFS +198: 0020,000d | 1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957636 +198: 0020,0010 | 10001 +198: image_metadata: +198: Metadata +198: 0008,0012 | 20250907 +198: 0008,0013 | 044647 +198: 0008,0060 | CT +198: 0008,103e | rect-2 +198: rtstruct_metadata: +198: Metadata +198: dose_metadata: +198: Metadata +198: rtplan_metadata: +198: Metadata +198: sro_metadata: +198: Metadata +198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.385837.1757170007.757253RTSTRUCT +198: Found DCM_ReferencedFrameOfReferenceSequence! +198: Found DCM_RTReferencedStudySequence! +198: Trying to load rt structure set. +198: Adding structure (1), Foreground +198: Structure 1 has color 255\0\0 +198: Setting PIH from RDD +198: PIH is: +198: Origin = -243.4211 -243.4211 -243.4211 +198: Size = 38 38 38 +198: Spacing = 13.1579 13.1579 13.1579 +198: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +198: Rt_study_warp: Convert ss_img to cxt. +198: Rt_study_warp: Apply dicom_dir. +198: Rt_study_warp: Set geometry from PIH. +198: Rt_study_warp: Set rasterization geometry. +198: rast_dim = 512 512 7 +198: rast_offset = -55.2632 -55.2632 -46.0526 +198: rast_spacing = 0.215872 0.215872 13.1579 +198: Rt_study_warp: warp and save ss. +198: Warp_and_save_ss: save_ss_img +198: Rt_study_warp: Save dicom. +198: Keyholizing structure 0. +198: Finished! +198: +198: STDERR: +198: Not an error +254: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv +254: -- REGEX is ^15,([-0-9.]*) +254: -- LOWER_THRESH is 0.780 +254: -- UPPER_THRESH is 0.783 +254: -- PARSED VALUE=|15,0.781709| +254: -- PARSED_VALUE=|0.781709| +254: Not an error +440/578 Test #251: plm-dvh-b-check-1 ..................... Passed 0.02 sec +441/578 Test #252: plm-dvh-b-check-2 ..................... Passed 0.02 sec +442/578 Test #198: plm-convert-dicom-f ................... Passed 0.12 sec +443/578 Test #254: plm-dvh-c-check-1 ..................... Passed 0.01 sec test 261 Start 261: plm-mask-a-check @@ -20652,57 +20829,34 @@ 264: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.023" "-DUPPER_THRESH=0.024" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 264: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 264: Test timeout computed to be: 1500 -249: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv -249: -- REGEX is ^15.5,([-0-9.]*), -249: -- LOWER_THRESH is 0.0 -249: -- UPPER_THRESH is 0.001 -249: -- PARSED VALUE=|15.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0| -249: -- PARSED_VALUE=|0| -249: Not an error -251: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv -251: -- REGEX is ^15,([-0-9.]*) -251: -- LOWER_THRESH is 0.999 -251: -- UPPER_THRESH is 1.0 -251: -- PARSED VALUE=|15,1| -251: -- PARSED_VALUE=|1| -251: Not an error -438/578 Test #249: plm-dvh-a-check-2 ..................... Passed 0.04 sec test 267 Start 267: plm-gamma-b-check 267: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.245" "-DUPPER_THRESH=0.255" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 267: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 267: Test timeout computed to be: 1500 -254: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv -254: -- REGEX is ^15,([-0-9.]*) -254: -- LOWER_THRESH is 0.780 -254: -- UPPER_THRESH is 0.783 -254: -- PARSED VALUE=|15,0.781709| -254: -- PARSED_VALUE=|0.781709| -254: Not an error -252: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv -252: -- REGEX is ^15.5,([-0-9.]*) -252: -- LOWER_THRESH is 0.0 -252: -- UPPER_THRESH is 0.001 -252: -- PARSED VALUE=|15.5,0| -252: -- PARSED_VALUE=|0| -252: Not an error -196: RETVAL: 1 -196: STDOUT: Could not open input file /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/ for read -196: -196: STDERR: -196: Not an error -258: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a-stats.stdout.txt -439/578 Test #196: plm-convert-dicom-d ................... Passed 0.20 sec -440/578 Test #251: plm-dvh-b-check-1 ..................... Passed 0.04 sec -441/578 Test #252: plm-dvh-b-check-2 ..................... Passed 0.03 sec -442/578 Test #254: plm-dvh-c-check-1 ..................... Passed 0.03 sec test 269 Start 269: plm-gamma-c-check 269: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.stdout.txt" "-DREGEX=Pass rate = *([-0-9.]*)" "-DLOWER_THRESH=90.6" "-DUPPER_THRESH=90.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 269: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 269: Test timeout computed to be: 1500 +255: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv +255: -- REGEX is ^15.5,([-0-9.]*) +255: -- LOWER_THRESH is 0.0 +255: -- UPPER_THRESH is 0.001 +255: -- PARSED VALUE=|15.5,0| +255: -- PARSED_VALUE=|0| +255: Not an error +258: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a-stats.stdout.txt +258: -- REGEX is AVE *([-0-9.]*) +258: -- LOWER_THRESH is -0.1 +258: -- UPPER_THRESH is +0.1 +258: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| +258: -- PARSED_VALUE=|0.000000| +258: Not an error +444/578 Test #255: plm-dvh-c-check-2 ..................... Passed 0.02 sec +445/578 Test #258: plm-fill-a-check ...................... Passed 0.02 sec test 271 Start 271: plm-gamma-d-check @@ -20715,25 +20869,27 @@ 274: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 274: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 274: Test timeout computed to be: 1500 +261: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a-stats.stdout.txt +261: -- REGEX is AVE *([-0-9.]*) +261: -- LOWER_THRESH is -1000.1 +261: -- UPPER_THRESH is -999.9 +261: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| +261: -- PARSED_VALUE=|-1000.000000| +261: Not an error +264: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a-stats.stdout.txt +264: -- REGEX is AVE *([-0-9.]*) +264: -- LOWER_THRESH is 0.023 +264: -- UPPER_THRESH is 0.024 +264: -- PARSED VALUE=|MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000| +264: -- PARSED_VALUE=|0.023500| +264: Not an error +446/578 Test #261: plm-mask-a-check ...................... Passed 0.01 sec test 277 Start 277: plm-multiply-a-check 277: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 277: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 277: Test timeout computed to be: 1500 -255: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv -255: -- REGEX is ^15.5,([-0-9.]*) -255: -- LOWER_THRESH is 0.0 -255: -- UPPER_THRESH is 0.001 -255: -- PARSED VALUE=|15.5,0| -255: -- PARSED_VALUE=|0| -255: Not an error -258: -- REGEX is AVE *([-0-9.]*) -258: -- LOWER_THRESH is -0.1 -258: -- UPPER_THRESH is +0.1 -258: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| -258: -- PARSED_VALUE=|0.000000| -258: Not an error 267: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b-stats.stdout.txt 267: -- REGEX is AVE *([-0-9.]*) 267: -- LOWER_THRESH is 0.245 @@ -20741,55 +20897,34 @@ 267: -- PARSED VALUE=|MIN 0.000000 AVE 0.250000 MAX 2.000000 NONZERO 1000 NUMVOX 8000| 267: -- PARSED_VALUE=|0.250000| 267: Not an error -264: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a-stats.stdout.txt -264: -- REGEX is AVE *([-0-9.]*) -264: -- LOWER_THRESH is 0.023 -264: -- UPPER_THRESH is 0.024 -264: -- PARSED VALUE=|MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000| -264: -- PARSED_VALUE=|0.023500| -264: Not an error -261: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a-stats.stdout.txt -261: -- REGEX is AVE *([-0-9.]*) -261: -- LOWER_THRESH is -1000.1 -261: -- UPPER_THRESH is -999.9 -261: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| -261: -- PARSED_VALUE=|-1000.000000| -261: Not an error -269: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.stdout.txt -269: -- REGEX is Pass rate = *([-0-9.]*) -269: -- LOWER_THRESH is 90.6 -269: -- UPPER_THRESH is 90.8 -269: -- PARSED VALUE=|Pass rate = 90.719998 %| -269: -- PARSED_VALUE=|90.719998| -443/578 Test #255: plm-dvh-c-check-2 ..................... Passed 0.05 sec -444/578 Test #258: plm-fill-a-check ...................... Passed 0.05 sec -445/578 Test #261: plm-mask-a-check ...................... Passed 0.04 sec -446/578 Test #267: plm-gamma-b-check ..................... Passed 0.03 sec -269: Not an error +447/578 Test #264: plm-gamma-a-check ..................... Passed 0.02 sec test 280 Start 280: plm-multiply-vf-a-check 280: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=100.000" "-DUPPER_THRESH=100.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 280: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 280: Test timeout computed to be: 1500 +448/578 Test #267: plm-gamma-b-check ..................... Passed 0.01 sec test 281 Start 281: plm-usage 281: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-usage" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 281: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 281: Test timeout computed to be: 1500 +269: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.stdout.txt +269: -- REGEX is Pass rate = *([-0-9.]*) +269: -- LOWER_THRESH is 90.6 +269: -- UPPER_THRESH is 90.8 +269: -- PARSED VALUE=|Pass rate = 90.719998 %| +269: -- PARSED_VALUE=|90.719998| +269: Not an error +449/578 Test #269: plm-gamma-c-check ..................... Passed 0.01 sec test 284 Start 284: plm-reg-align-center-check 284: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-stats.stdout.txt" "-DREGEX=MAE *([-0-9.]*)" "-DLOWER_THRESH=-0.005" "-DUPPER_THRESH=0.005" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 284: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 284: Test timeout computed to be: 1500 -test 287 - Start 287: plm-reg-itk-translation-check - -287: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-677.6" "-DUPPER_THRESH=-677.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -287: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -287: Test timeout computed to be: 1500 271: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.stdout.txt 271: -- REGEX is Pass rate = *([-0-9.]*) 271: -- LOWER_THRESH is 89.9 @@ -20797,27 +20932,7 @@ 271: -- PARSED VALUE=|Pass rate = 89.999998 %| 271: -- PARSED_VALUE=|89.999998| 271: Not an error -447/578 Test #264: plm-gamma-a-check ..................... Passed 0.06 sec -448/578 Test #269: plm-gamma-c-check ..................... Passed 0.04 sec -449/578 Test #271: plm-gamma-d-check ..................... Passed 0.03 sec -test 290 - Start 290: plm-reg-itk-rigid-a-check-1 - -290: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -290: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -290: Test timeout computed to be: 1500 -test 292 - Start 292: plm-reg-itk-rigid-a-check-2 - -292: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -292: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -292: Test timeout computed to be: 1500 -test 295 - Start 295: plm-reg-itk-similarity-check-1 - -295: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-981.3" "-DUPPER_THRESH=-981.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -295: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -295: Test timeout computed to be: 1500 +450/578 Test #271: plm-gamma-d-check ..................... Passed 0.01 sec 274: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a-stats.stdout.txt 274: -- REGEX is AVE *([-0-9.]*) 274: -- LOWER_THRESH is 0.0 @@ -20825,6 +20940,12 @@ 274: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| 274: -- PARSED_VALUE=|0.000000| 274: Not an error +test 287 + Start 287: plm-reg-itk-translation-check + +287: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-677.6" "-DUPPER_THRESH=-677.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +287: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +287: Test timeout computed to be: 1500 277: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a-stats.stdout.txt 277: -- REGEX is AVE *([-0-9.]*) 277: -- LOWER_THRESH is 0.0 @@ -20832,6 +20953,20 @@ 277: -- PARSED VALUE=|MIN -0.000000 AVE 0.000000 MAX -0.000000 NONZERO 0 NUMVOX 54872| 277: -- PARSED_VALUE=|0.000000| 277: Not an error +451/578 Test #274: plm-maximum-a-check ................... Passed 0.02 sec +452/578 Test #277: plm-multiply-a-check .................. Passed 0.01 sec +test 290 + Start 290: plm-reg-itk-rigid-a-check-1 + +290: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +290: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +290: Test timeout computed to be: 1500 +test 292 + Start 292: plm-reg-itk-rigid-a-check-2 + +292: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +292: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +292: Test timeout computed to be: 1500 280: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a-stats.stdout.txt 280: -- REGEX is Mean: *([-0-9.]*) 280: -- LOWER_THRESH is 100.000 @@ -20842,11 +20977,27 @@ 281: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 281: PARMS is 281: EXPECTED_ERRNO is -197: RETVAL: 1 -197: STDOUT: Sorry, could not load input as any known type. -197: -197: STDERR: -197: Not an error +284: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-stats.stdout.txt +284: -- REGEX is MAE *([-0-9.]*) +284: -- LOWER_THRESH is -0.005 +284: -- UPPER_THRESH is 0.005 +284: -- PARSED VALUE=|MAE 0.000002 MSE 0.000000| +284: -- PARSED_VALUE=|0.000002| +284: Not an error +453/578 Test #280: plm-multiply-vf-a-check ............... Passed 0.02 sec +454/578 Test #284: plm-reg-align-center-check ............ Passed 0.01 sec +test 295 + Start 295: plm-reg-itk-similarity-check-1 + +295: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-981.3" "-DUPPER_THRESH=-981.1" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +295: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +295: Test timeout computed to be: 1500 +test 297 + Start 297: plm-reg-itk-similarity-check-2 + +297: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-940.8" "-DUPPER_THRESH=-940.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +297: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +297: Test timeout computed to be: 1500 287: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-stats.stdout.txt 287: -- REGEX is AVE *([-0-9.]*) 287: -- LOWER_THRESH is -677.6 @@ -20854,41 +21005,13 @@ 287: -- PARSED VALUE=|MIN -999.914246 AVE -677.557922 MAX 0.000000 NONZERO 43320 NUMVOX 54872| 287: -- PARSED_VALUE=|-677.557922| 287: Not an error -450/578 Test #197: plm-convert-dicom-e ................... Passed 0.26 sec -451/578 Test #274: plm-maximum-a-check ................... Passed 0.05 sec -452/578 Test #277: plm-multiply-a-check .................. Passed 0.05 sec -453/578 Test #280: plm-multiply-vf-a-check ............... Passed 0.04 sec -test 297 - Start 297: plm-reg-itk-similarity-check-2 - -297: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-940.8" "-DUPPER_THRESH=-940.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -297: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -297: Test timeout computed to be: 1500 +455/578 Test #287: plm-reg-itk-translation-check ......... Passed 0.02 sec test 300 Start 300: plm-reg-itk-bspline-check-1 300: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-764.0" "-DUPPER_THRESH=-763.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 300: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 300: Test timeout computed to be: 1500 -test 302 - Start 302: plm-reg-itk-demons-check-1 - -302: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.85" "-DUPPER_THRESH=34.95" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -302: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -302: Test timeout computed to be: 1500 -test 304 - Start 304: plm-reg-itk-demons-check-2 - -304: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-755.3" "-DUPPER_THRESH=-754.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -304: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -304: Test timeout computed to be: 1500 -284: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-stats.stdout.txt -284: -- REGEX is MAE *([-0-9.]*) -284: -- LOWER_THRESH is -0.005 -284: -- UPPER_THRESH is 0.005 -284: -- PARSED VALUE=|MAE 0.000002 MSE 0.000000| -284: -- PARSED_VALUE=|0.000002| -284: Not an error 290: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-1.stdout.txt 290: -- REGEX is AVE *([-0-9.]*) 290: -- LOWER_THRESH is -939.3 @@ -20896,6 +21019,11 @@ 290: -- PARSED VALUE=|MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872| 290: -- PARSED_VALUE=|-939.203979| 290: Not an error +197: RETVAL: 1 +197: STDOUT: Sorry, could not load input as any known type. +197: +197: STDERR: +197: Not an error 292: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-2.stdout.txt 292: -- REGEX is AVE *([-0-9.]*) 292: -- LOWER_THRESH is -939.3 @@ -20910,25 +21038,22 @@ 295: -- PARSED VALUE=|MIN -1000.000000 AVE -981.187012 MAX 0.000000 NONZERO 54152 NUMVOX 54872| 295: -- PARSED_VALUE=|-981.187012| 295: Not an error -297: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt -297: -- REGEX is AVE *([-0-9.]*) -297: -- LOWER_THRESH is -940.8 -297: -- UPPER_THRESH is -940.5 -297: -- PARSED VALUE=|MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872| -297: -- PARSED_VALUE=|-940.684265| -297: Not an error -300: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-stats-1.stdout.txt -300: -- REGEX is AVE *([-0-9.]*) -300: -- LOWER_THRESH is -764.0 -300: -- UPPER_THRESH is -763.6 -300: -- PARSED VALUE=|MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872| -300: -- PARSED_VALUE=|-763.817810| -300: Not an error -454/578 Test #284: plm-reg-align-center-check ............ Passed 0.06 sec -455/578 Test #287: plm-reg-itk-translation-check ......... Passed 0.06 sec -456/578 Test #290: plm-reg-itk-rigid-a-check-1 ........... Passed 0.06 sec -457/578 Test #292: plm-reg-itk-rigid-a-check-2 ........... Passed 0.05 sec -458/578 Test #295: plm-reg-itk-similarity-check-1 ........ Passed 0.04 sec +456/578 Test #197: plm-convert-dicom-e ................... Passed 0.17 sec +457/578 Test #290: plm-reg-itk-rigid-a-check-1 ........... Passed 0.02 sec +test 302 + Start 302: plm-reg-itk-demons-check-1 + +302: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.85" "-DUPPER_THRESH=34.95" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +302: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +302: Test timeout computed to be: 1500 +test 304 + Start 304: plm-reg-itk-demons-check-2 + +304: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-755.3" "-DUPPER_THRESH=-754.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +304: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +304: Test timeout computed to be: 1500 +458/578 Test #292: plm-reg-itk-rigid-a-check-2 ........... Passed 0.02 sec +459/578 Test #295: plm-reg-itk-similarity-check-1 ........ Passed 0.02 sec test 306 Start 306: plm-reg-itk-demons-diff-check-1 @@ -20941,24 +21066,34 @@ 308: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=32.65" "-DUPPER_THRESH=32.75" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 308: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 308: Test timeout computed to be: 1500 +297: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt +297: -- REGEX is AVE *([-0-9.]*) +297: -- LOWER_THRESH is -940.8 +297: -- UPPER_THRESH is -940.5 +297: -- PARSED VALUE=|MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872| +297: -- PARSED_VALUE=|-940.684265| +297: Not an error +460/578 Test #297: plm-reg-itk-similarity-check-2 ........ Passed 0.02 sec test 310 Start 310: plm-reg-itk-demons-sym-logd-check-1 310: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.85" "-DUPPER_THRESH=35.95" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 310: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 310: Test timeout computed to be: 1500 +300: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-stats-1.stdout.txt +300: -- REGEX is AVE *([-0-9.]*) +300: -- LOWER_THRESH is -764.0 +300: -- UPPER_THRESH is -763.6 +300: -- PARSED VALUE=|MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872| +300: -- PARSED_VALUE=|-763.817810| +300: Not an error +461/578 Test #300: plm-reg-itk-bspline-check-1 ........... Passed 0.02 sec test 313 Start 313: plm-bsp-mse-c-check 313: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 313: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 313: Test timeout computed to be: 1500 -test 316 - Start 316: plm-bsp-mse-g-check - -316: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -316: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -316: Test timeout computed to be: 1500 302: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.stdout.txt 302: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 302: -- LOWER_THRESH is 31.85 @@ -20966,132 +21101,6 @@ 302: -- PARSED VALUE=|VF_MAX = 97.6986 VF_AVG = 31.9237| 302: -- PARSED_VALUE=|31.9237| 302: Not an error -198: RETVAL: 0 -198: STDOUT: Loading RDD -198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT -198: Found DCM_ReferencedFrameOfReferenceSequence! -198: Found DCM_RTReferencedStudySequence! -198: Trying to load rt dose. -198: Load: DoseGridScaling = 0.000000 -198: RTDOSE: dim = 38 38 38 -198: ipp = -243.421005 -243.421005 -243.421005 -198: spc = 13.157900 13.157900 13.157900 -198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -198: Bits_alloc: 32 -198: Bits_stored: 32 -198: High_bit: 31 -198: Pixel_rep: 0 -198: rc = 1, length = 109744, npix = 54872 -198: Trying to load rt structure set. -198: Adding structure (1), Foreground -198: Structure 1 has color 255\0\0 -198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT -198: Found DCM_ReferencedFrameOfReferenceSequence! -198: Found DCM_RTReferencedStudySequence! -198: Trying to load rt dose. -198: Load: DoseGridScaling = 0.000000 -198: RTDOSE: dim = 38 38 38 -198: ipp = -243.421005 -243.421005 -243.421005 -198: spc = 13.157900 13.157900 13.157900 -198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -198: Bits_alloc: 32 -198: Bits_stored: 32 -198: High_bit: 31 -198: Pixel_rep: 0 -198: rc = 1, length = 109744, npix = 54872 -198: Trying to load rt structure set. -198: Adding structure (1), Foreground -198: Structure 1 has color 255\0\0 -198: Loading RDD complete -198: date_string: 20261009 -198: description_string: -198: referring_physician_name_string: -198: accession_number_string: -198: time_string: 085722 -198: study_id_string: -198: position_reference_indicator_string: -198: ct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772100 -198: dose_instance_uid: -198: dose_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.63336.1791579454.986467 -198: plan_instance_uid: -198: rtstruct_instance_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772098 -198: rtstruct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.63336.1791579454.986468 -198: study_metadata: -198: Metadata -198: 0008,0052 | 1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772081 -198: 0010,0010 | RECT^SYNTH -198: 0010,0020 | RECT-SYNTH -198: 0010,0040 | O -198: 0018,5100 | HFS -198: 0020,000d | 1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772080 -198: 0020,0010 | 10001 -198: image_metadata: -198: Metadata -198: 0008,0012 | 20261009 -198: 0008,0013 | 085722 -198: 0008,0060 | CT -198: 0008,103e | rect-2 -198: rtstruct_metadata: -198: Metadata -198: dose_metadata: -198: Metadata -198: rtplan_metadata: -198: Metadata -198: sro_metadata: -198: Metadata -198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55224.1791579442.502729RTSTRUCT -198: Found DCM_ReferencedFrameOfReferenceSequence! -198: Found DCM_RTReferencedStudySequence! -198: Trying to load rt structure set. -198: Adding structure (1), Foreground -198: Structure 1 has color 255\0\0 -198: Setting PIH from RDD -198: PIH is: -198: Origin = -243.4211 -243.4211 -243.4211 -198: Size = 38 38 38 -198: Spacing = 13.1579 13.1579 13.1579 -198: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -198: Rt_study_warp: Convert ss_img to cxt. -198: Rt_study_warp: Apply dicom_dir. -198: Rt_study_warp: Set geometry from PIH. -198: Rt_study_warp: Set rasterization geometry. -198: rast_dim = 512 512 7 -198: rast_offset = -55.2632 -55.2632 -46.0526 -198: rast_spacing = 0.215872 0.215872 13.1579 -198: Rt_study_warp: warp and save ss. -198: Warp_and_save_ss: save_ss_img -198: Rt_study_warp: Save dicom. -198: Keyholizing structure 0. -198: Finished! -198: -198: STDERR: -198: Not an error -205: RETVAL: 0 -205: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt -205: Setting PIH from M_IMG -205: PIH is: -205: Origin = -25.0000 -25.0000 -25.0000 -205: Size = 38 38 38 -205: Spacing = 1.3158 1.3158 1.3158 -205: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -205: Rt_study_warp: Convert ss_img to cxt. -205: Doing extraction -205: Rt_study_warp: Apply dicom_dir. -205: Rt_study_warp: Set geometry from PIH. -205: Rt_study_warp: Set rasterization geometry. -205: rast_dim = 512 512 14 -205: rast_offset = -10.3618 -10.3618 -9.21053 -205: rast_spacing = 0.0404759 0.0404759 1.31579 -205: Rt_study_warp: warp and save ss. -205: Warp_and_save_ss: save_ss_img -205: Rt_study_warp: Save dicom. -205: Keyholizing structure 0. -205: Finished! -205: -205: STDERR: -205: Not an error 304: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-stats-2.stdout.txt 304: -- REGEX is AVE *([-0-9.]*) 304: -- LOWER_THRESH is -755.3 @@ -21099,6 +21108,20 @@ 304: -- PARSED VALUE=|MIN -999.914856 AVE -754.915161 MAX 0.000000 NONZERO 47950 NUMVOX 54872| 304: -- PARSED_VALUE=|-754.915161| 304: Not an error +462/578 Test #302: plm-reg-itk-demons-check-1 ............ Passed 0.02 sec +463/578 Test #304: plm-reg-itk-demons-check-2 ............ Passed 0.02 sec +test 316 + Start 316: plm-bsp-mse-g-check + +316: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +316: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +316: Test timeout computed to be: 1500 +test 319 + Start 319: plm-bsp-mse-h-check + +319: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +319: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +319: Test timeout computed to be: 1500 306: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.stdout.txt 306: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 306: -- LOWER_THRESH is 31.2 @@ -21106,13 +21129,6 @@ 306: -- PARSED VALUE=|VF_MAX = 102.433 VF_AVG = 31.2783| 306: -- PARSED_VALUE=|31.2783| 306: Not an error -459/578 Test #198: plm-convert-dicom-f ................... Passed 0.33 sec -460/578 Test #205: plm-convert-dicom-donut-c ............. Passed 0.31 sec -461/578 Test #297: plm-reg-itk-similarity-check-2 ........ Passed 0.07 sec -462/578 Test #300: plm-reg-itk-bspline-check-1 ........... Passed 0.06 sec -463/578 Test #302: plm-reg-itk-demons-check-1 ............ Passed 0.05 sec -464/578 Test #304: plm-reg-itk-demons-check-2 ............ Passed 0.04 sec -465/578 Test #306: plm-reg-itk-demons-diff-check-1 ....... Passed 0.03 sec 308: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.stdout.txt 308: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 308: -- LOWER_THRESH is 32.65 @@ -21120,38 +21136,82 @@ 308: -- PARSED VALUE=|VF_MAX = 112.668 VF_AVG = 32.7138| 308: -- PARSED_VALUE=|32.7138| 308: Not an error -466/578 Test #308: plm-reg-itk-demons-logd-check-1 ....... Passed 0.03 sec -310: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.stdout.txt -310: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) -310: -- LOWER_THRESH is 31.85 -310: -- UPPER_THRESH is 35.95 -310: -- PARSED VALUE=|VF_MAX = 109.365 VF_AVG = 31.9237| -310: -- PARSED_VALUE=|31.9237| -310: Not an error -test 319 - Start 319: plm-bsp-mse-h-check - -319: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -319: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -319: Test timeout computed to be: 1500 +464/578 Test #306: plm-reg-itk-demons-diff-check-1 ....... Passed 0.02 sec test 322 Start 322: plm-bsp-mse-i-check 322: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 322: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 322: Test timeout computed to be: 1500 +465/578 Test #308: plm-reg-itk-demons-logd-check-1 ....... Passed 0.02 sec test 325 Start 325: plm-bsp-mse-k-check 325: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 325: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 325: Test timeout computed to be: 1500 +310: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.stdout.txt +310: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) +310: -- LOWER_THRESH is 31.85 +310: -- UPPER_THRESH is 35.95 +310: -- PARSED VALUE=|VF_MAX = 109.365 VF_AVG = 31.9237| +310: -- PARSED_VALUE=|31.9237| +310: Not an error +466/578 Test #310: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.02 sec test 328 Start 328: plm-bsp-mse-l-check 328: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 328: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 328: Test timeout computed to be: 1500 +313: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-stats.stdout.txt +313: -- REGEX is AVE *([-0-9.]*) +313: -- LOWER_THRESH is -746.0 +313: -- UPPER_THRESH is -744.5 +313: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +313: -- PARSED_VALUE=|-745.347717| +313: Not an error +205: RETVAL: 0 +205: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt +205: Setting PIH from M_IMG +205: PIH is: +205: Origin = -25.0000 -25.0000 -25.0000 +205: Size = 38 38 38 +205: Spacing = 1.3158 1.3158 1.3158 +205: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +205: Rt_study_warp: Convert ss_img to cxt. +205: Doing extraction +205: Rt_study_warp: Apply dicom_dir. +205: Rt_study_warp: Set geometry from PIH. +205: Rt_study_warp: Set rasterization geometry. +205: rast_dim = 512 512 14 +205: rast_offset = -10.3618 -10.3618 -9.21053 +205: rast_spacing = 0.0404759 0.0404759 1.31579 +205: Rt_study_warp: warp and save ss. +205: Warp_and_save_ss: save_ss_img +205: Rt_study_warp: Save dicom. +205: Keyholizing structure 0. +205: Finished! +205: +205: STDERR: +205: Not an error +316: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt +316: -- REGEX is AVE *([-0-9.]*) +316: -- LOWER_THRESH is -746.0 +316: -- UPPER_THRESH is -744.5 +316: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +316: -- PARSED_VALUE=|-745.347717| +316: Not an error +319: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt +319: -- REGEX is AVE *([-0-9.]*) +319: -- LOWER_THRESH is -746.0 +319: -- UPPER_THRESH is -744.5 +319: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +319: -- PARSED_VALUE=|-745.347717| +319: Not an error +467/578 Test #205: plm-convert-dicom-donut-c ............. Passed 0.19 sec +468/578 Test #313: plm-bsp-mse-c-check ................... Passed 0.02 sec +469/578 Test #316: plm-bsp-mse-g-check ................... Passed 0.02 sec test 330 Start 330: plm-bsp-mse-o-stats @@ -21164,35 +21224,49 @@ 332: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-p-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 332: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 332: Test timeout computed to be: 1500 -467/578 Test #310: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.05 sec test 334 Start 334: plm-bsp-mse-q-stats 334: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-q-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 334: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 334: Test timeout computed to be: 1500 +322: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-stats.stdout.txt +322: -- REGEX is AVE *([-0-9.]*) +322: -- LOWER_THRESH is -746.0 +322: -- UPPER_THRESH is -744.5 +322: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +322: -- PARSED_VALUE=|-745.347717| +322: Not an error +325: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-stats.stdout.txt +325: -- REGEX is AVE *([-0-9.]*) +325: -- LOWER_THRESH is -746.0 +325: -- UPPER_THRESH is -744.5 +325: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +325: -- PARSED_VALUE=|-745.347717| +325: Not an error +328: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-stats.stdout.txt +328: -- REGEX is AVE *([-0-9.]*) +328: -- LOWER_THRESH is -746.0 +328: -- UPPER_THRESH is -744.5 +328: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| +328: -- PARSED_VALUE=|-745.347717| +328: Not an error +244: RETVAL: 0 +244: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha +244: +244: STDERR: +244: Not an error +470/578 Test #319: plm-bsp-mse-h-check ................... Passed 0.04 sec +471/578 Test #322: plm-bsp-mse-i-check ................... Passed 0.03 sec +472/578 Test #325: plm-bsp-mse-k-check ................... Passed 0.03 sec +473/578 Test #328: plm-bsp-mse-l-check ................... Passed 0.03 sec +474/578 Test #244: plm-dmap-a ............................ Passed 0.14 sec test 336 Start 336: plm-bsp-mse-r-stats 336: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-r-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 336: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 336: Test timeout computed to be: 1500 -316: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt -316: -- REGEX is AVE *([-0-9.]*) -316: -- LOWER_THRESH is -746.0 -316: -- UPPER_THRESH is -744.5 -316: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -316: -- PARSED_VALUE=|-745.347717| -316: Not an error -468/578 Test #316: plm-bsp-mse-g-check ................... Passed 0.05 sec -313: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-stats.stdout.txt -313: -- REGEX is AVE *([-0-9.]*) -313: -- LOWER_THRESH is -746.0 -313: -- UPPER_THRESH is -744.5 -313: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -313: -- PARSED_VALUE=|-745.347717| -313: Not an error -469/578 Test #313: plm-bsp-mse-c-check ................... Passed 0.06 sec test 339 Start 339: plm-bsp-mi-c-check @@ -21211,74 +21285,64 @@ 345: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-114.0" "-DUPPER_THRESH=-113.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 345: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 345: Test timeout computed to be: 1500 -319: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt -319: -- REGEX is AVE *([-0-9.]*) -319: -- LOWER_THRESH is -746.0 -319: -- UPPER_THRESH is -744.5 -319: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -319: -- PARSED_VALUE=|-745.347717| -319: Not an error -325: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-stats.stdout.txt -325: -- REGEX is AVE *([-0-9.]*) -325: -- LOWER_THRESH is -746.0 -325: -- UPPER_THRESH is -744.5 -325: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -325: -- PARSED_VALUE=|-745.347717| -325: Not an error -322: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-stats.stdout.txt -322: -- REGEX is AVE *([-0-9.]*) -322: -- LOWER_THRESH is -746.0 -322: -- UPPER_THRESH is -744.5 -322: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -322: -- PARSED_VALUE=|-745.347717| -322: Not an error -470/578 Test #319: plm-bsp-mse-h-check ................... Passed 0.06 sec -471/578 Test #322: plm-bsp-mse-i-check ................... Passed 0.05 sec +281: RETVAL: 0 +281: STDOUT: plastimatch version 1.10.0 +281: Usage: plastimatch command [options] +281: Commands: +281: add adjust average bbox boundary +281: crop compare compose convert dice +281: diff dmap dose drr dvh +281: fdk fill filter gamma header +281: intersect jacobian lm-warp mabs mask +281: maximum ml-convert multiply probe register +281: resample scale segment sift stats +281: synth synth-vf threshold thumbnail union +281: warp wed xf-convert xf-invert +281: +281: For detailed usage of a specific command, type: +281: plastimatch command +281: +281: STDERR: +281: Not an error test 348 Start 348: plm-bsp-gm-k-check 348: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-122.5" "-DUPPER_THRESH=-121.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 348: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 348: Test timeout computed to be: 1500 +330: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +330: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha +330: EXPECTED_ERRNO is +334: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +334: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha +334: EXPECTED_ERRNO is +332: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +332: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha +332: EXPECTED_ERRNO is +475/578 Test #281: plm-usage ............................. Passed 0.12 sec test 350 Start 350: plm-bsp-sm-multi-a-stats 350: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-sm-multi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 350: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 350: Test timeout computed to be: 1500 -472/578 Test #325: plm-bsp-mse-k-check ................... Passed 0.07 sec -328: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-stats.stdout.txt -328: -- REGEX is AVE *([-0-9.]*) -328: -- LOWER_THRESH is -746.0 -328: -- UPPER_THRESH is -744.5 -328: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| -328: -- PARSED_VALUE=|-745.347717| -328: Not an error -473/578 Test #328: plm-bsp-mse-l-check ................... Passed 0.06 sec -332: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -332: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha -332: EXPECTED_ERRNO is -330: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -330: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha -330: EXPECTED_ERRNO is +336: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +336: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha +336: EXPECTED_ERRNO is +339: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-stats.stdout.txt +339: -- REGEX is AVE *([-0-9.]*) +339: -- LOWER_THRESH is -114.0 +339: -- UPPER_THRESH is -113.0 +339: -- PARSED VALUE=|MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872| +339: -- PARSED_VALUE=|-113.473007| +339: Not an error +476/578 Test #339: plm-bsp-mi-c-check .................... Passed 0.03 sec test 353 Start 353: plm-bsp-openmp-check 353: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 353: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 353: Test timeout computed to be: 1500 -test 355 - Start 355: plm-bsp-resume-stats - -355: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -355: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -355: Test timeout computed to be: 1500 -334: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -334: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha -334: EXPECTED_ERRNO is -336: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -336: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha -336: EXPECTED_ERRNO is 342: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-stats.stdout.txt 342: -- REGEX is AVE *([-0-9.]*) 342: -- LOWER_THRESH is -129.5 @@ -21286,28 +21350,29 @@ 342: -- PARSED VALUE=|MIN -991.894104 AVE -128.919357 MAX 0.000000 NONZERO 48385 NUMVOX 54872| 342: -- PARSED_VALUE=|-128.919357| 342: Not an error -339: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-stats.stdout.txt -339: -- REGEX is AVE *([-0-9.]*) -339: -- LOWER_THRESH is -114.0 -339: -- UPPER_THRESH is -113.0 -339: -- PARSED VALUE=|MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872| -339: -- PARSED_VALUE=|-113.473007| -339: Not an error -244: RETVAL: 0 -244: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha -244: -244: STDERR: -244: Not an error +348: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-stats.stdout.txt +348: -- REGEX is AVE *([-0-9.]*) +348: -- LOWER_THRESH is -122.5 +348: -- UPPER_THRESH is -121.5 +348: -- PARSED VALUE=|MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872| 345: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-stats.stdout.txt 345: -- REGEX is AVE *([-0-9.]*) 345: -- LOWER_THRESH is -114.0 345: -- UPPER_THRESH is -113.0 345: -- PARSED VALUE=|MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872| +348: -- PARSED_VALUE=|-121.961853| +348: Not an error 345: -- PARSED_VALUE=|-113.473007| 345: Not an error -474/578 Test #244: plm-dmap-a ............................ Passed 0.29 sec -475/578 Test #339: plm-bsp-mi-c-check .................... Passed 0.05 sec -476/578 Test #342: plm-bsp-mi-c-2-check .................. Passed 0.05 sec +477/578 Test #342: plm-bsp-mi-c-2-check .................. Passed 0.04 sec +478/578 Test #345: plm-bsp-mi-k-check .................... Passed 0.04 sec +479/578 Test #348: plm-bsp-gm-k-check .................... Passed 0.03 sec +test 355 + Start 355: plm-bsp-resume-stats + +355: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +355: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +355: Test timeout computed to be: 1500 test 357 Start 357: plm-bsp-logfile-check @@ -21320,12 +21385,9 @@ 360: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=106.6" "-DUPPER_THRESH=107.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 360: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 360: Test timeout computed to be: 1500 -test 363 - Start 363: plm-bsp-double-check - -363: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=107.6" "-DUPPER_THRESH=108.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -363: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -363: Test timeout computed to be: 1500 +350: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +350: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha +350: EXPECTED_ERRNO is 353: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-stats.stdout.txt 353: -- REGEX is AVE *([-0-9.]*) 353: -- LOWER_THRESH is -746.0 @@ -21333,111 +21395,108 @@ 353: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 353: -- PARSED_VALUE=|-745.347717| 353: Not an error +480/578 Test #353: plm-bsp-openmp-check .................. Passed 0.03 sec +test 363 + Start 363: plm-bsp-double-check + +363: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=107.6" "-DUPPER_THRESH=108.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +363: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +363: Test timeout computed to be: 1500 355: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 355: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha 355: EXPECTED_ERRNO is -350: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -350: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha -350: EXPECTED_ERRNO is -348: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-stats.stdout.txt -348: -- REGEX is AVE *([-0-9.]*) -348: -- LOWER_THRESH is -122.5 -348: -- UPPER_THRESH is -121.5 -348: -- PARSED VALUE=|MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872| -348: -- PARSED_VALUE=|-121.961853| -348: Not an error -477/578 Test #345: plm-bsp-mi-k-check .................... Passed 0.07 sec -478/578 Test #353: plm-bsp-openmp-check .................. Passed 0.05 sec +357: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-logfile.txt +357: -- REGEX is \[.*, 5] MSE *([-0-9.]*) +357: -- LOWER_THRESH is 281.5 +357: -- UPPER_THRESH is 282.5 +246: RETVAL: 0 +246: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha +246: +246: STDERR: +357: -- PARSED VALUE=|[ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.031 s ]| +357: -- PARSED_VALUE=|282.038| +357: Not an error +246: Not an error +481/578 Test #357: plm-bsp-logfile-check ................. Passed 0.01 sec test 364 Start 364: plm-bsp-itk-output 364: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-itk-output" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-itk-output.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 364: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 364: Test timeout computed to be: 1500 +482/578 Test #246: plm-dmap-c ............................ Passed 0.21 sec test 367 Start 367: plm-bsp-char-output-check 367: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output-stats.stdout.txt" "-DREGEX=MIN *([-0-9.]*)" "-DLOWER_THRESH=-128.1" "-DUPPER_THRESH=-127.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 367: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 367: Test timeout computed to be: 1500 -357: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-logfile.txt -357: -- REGEX is \[.*, 5] MSE *([-0-9.]*) -357: -- LOWER_THRESH is 281.5 -357: -- UPPER_THRESH is 282.5 -357: -- PARSED VALUE=|[ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.044 s ]| -357: -- PARSED_VALUE=|282.038| -357: Not an error -479/578 Test #348: plm-bsp-gm-k-check .................... Passed 0.07 sec -test 371 - Start 371: plm-bsp-regularize-none-check - -371: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.31" "-DUPPER_THRESH=0.32" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -371: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -371: Test timeout computed to be: 1500 +360: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-stats.stdout.txt +360: -- REGEX is AVE *([-0-9.]*) +360: -- LOWER_THRESH is 106.6 363: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-stats.stdout.txt 363: -- REGEX is AVE *([-0-9.]*) 363: -- LOWER_THRESH is 107.6 363: -- UPPER_THRESH is 108.6 +360: -- UPPER_THRESH is 107.6 363: -- PARSED VALUE=|MIN 0.000000 AVE 108.147682 MAX 998.045227 NONZERO 46833 NUMVOX 54872| 363: -- PARSED_VALUE=|108.147682| 363: Not an error -480/578 Test #357: plm-bsp-logfile-check ................. Passed 0.06 sec +360: -- PARSED VALUE=|MIN 0.000000 AVE 107.313034 MAX 997.000000 NONZERO 44294 NUMVOX 54872| +360: -- PARSED_VALUE=|107.313034| +360: Not an error +483/578 Test #363: plm-bsp-double-check .................. Passed 0.01 sec +test 371 + Start 371: plm-bsp-regularize-none-check + +371: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.31" "-DUPPER_THRESH=0.32" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +371: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +371: Test timeout computed to be: 1500 +484/578 Test #360: plm-bsp-ushort-check .................. Passed 0.02 sec test 374 Start 374: plm-bsp-regularize-analytic-check 374: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.415" "-DUPPER_THRESH=0.425" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 374: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 374: Test timeout computed to be: 1500 -360: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-stats.stdout.txt -360: -- REGEX is AVE *([-0-9.]*) -360: -- LOWER_THRESH is 106.6 -360: -- UPPER_THRESH is 107.6 -360: -- PARSED VALUE=|MIN 0.000000 AVE 107.313034 MAX 997.000000 NONZERO 44294 NUMVOX 54872| -360: -- PARSED_VALUE=|107.313034| -360: Not an error -481/578 Test #363: plm-bsp-double-check .................. Passed 0.04 sec +364: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +364: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-itk-output.txt +364: EXPECTED_ERRNO is +367: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output-stats.stdout.txt +367: -- REGEX is MIN *([-0-9.]*) +367: -- LOWER_THRESH is -128.1 +367: -- UPPER_THRESH is -127.9 +367: -- PARSED VALUE=|MIN -128.000000 AVE -127.132690 MAX 0.000000 NONZERO 54608 NUMVOX 54872| +367: -- PARSED_VALUE=|-128.000000| +367: Not an error +485/578 Test #367: plm-bsp-char-output-check ............. Passed 0.01 sec test 377 Start 377: plm-bsp-regularize-numeric-check 377: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.440" "-DUPPER_THRESH=0.445" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 377: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 377: Test timeout computed to be: 1500 -482/578 Test #360: plm-bsp-ushort-check .................. Passed 0.06 sec -281: RETVAL: 0 -281: STDOUT: plastimatch version 1.10.0 -281: Usage: plastimatch command [options] -281: Commands: -281: add adjust average bbox boundary -281: crop compare compose convert dice -281: diff dmap dose drr dvh -281: fdk fill filter gamma header -281: intersect jacobian lm-warp mabs mask -281: maximum ml-convert multiply probe register -281: resample scale segment sift stats -281: synth synth-vf threshold thumbnail union -281: warp wed xf-convert xf-invert -281: -281: For detailed usage of a specific command, type: -281: plastimatch command -281: -281: STDERR: +374: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-stats.stdout.txt +374: -- REGEX is MINJAC *([-0-9.]*) +374: -- LOWER_THRESH is 0.415 +374: -- UPPER_THRESH is 0.425 +374: -- PARSED VALUE=|Jacobian: MINJAC 0.419027 MAXJAC 1.04996| +374: -- PARSED_VALUE=|0.419027| +374: Not an error +486/578 Test #374: plm-bsp-regularize-analytic-check ..... Passed 0.01 sec test 378 Start 378: plm-bsp-landmark-a 378: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 378: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 378: Test timeout computed to be: 1500 -281: Not an error -364: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -364: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/plm-bsp-itk-output.txt -364: EXPECTED_ERRNO is -483/578 Test #281: plm-usage ............................. Passed 0.28 sec -test 381 - Start 381: plm-bsp-landmark-b-check - -381: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -381: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -381: Test timeout computed to be: 1500 +377: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-stats.stdout.txt +377: -- REGEX is MINJAC *([-0-9.]*) +377: -- LOWER_THRESH is 0.440 +377: -- UPPER_THRESH is 0.445 +377: -- PARSED VALUE=|Jacobian: MINJAC 0.443734 MAXJAC 1.03502| +377: -- PARSED_VALUE=|0.443734| +377: Not an error 371: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-stats.stdout.txt 371: -- REGEX is MINJAC *([-0-9.]*) 371: -- LOWER_THRESH is 0.31 @@ -21445,72 +21504,75 @@ 371: -- PARSED VALUE=|Jacobian: MINJAC 0.315393 MAXJAC 1.06557| 371: -- PARSED_VALUE=|0.315393| 371: Not an error -374: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-stats.stdout.txt -374: -- REGEX is MINJAC *([-0-9.]*) -374: -- LOWER_THRESH is 0.415 -374: -- UPPER_THRESH is 0.425 -374: -- PARSED VALUE=|Jacobian: MINJAC 0.419027 MAXJAC 1.04996| -374: -- PARSED_VALUE=|0.419027| -374: Not an error -367: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output-stats.stdout.txt -367: -- REGEX is MIN *([-0-9.]*) -367: -- LOWER_THRESH is -128.1 -367: -- UPPER_THRESH is -127.9 -367: -- PARSED VALUE=|MIN -128.000000 AVE -127.132690 MAX 0.000000 NONZERO 54608 NUMVOX 54872| -367: -- PARSED_VALUE=|-128.000000| -367: Not an error -484/578 Test #367: plm-bsp-char-output-check ............. Passed 0.06 sec -485/578 Test #371: plm-bsp-regularize-none-check ......... Passed 0.06 sec -486/578 Test #374: plm-bsp-regularize-analytic-check ..... Passed 0.04 sec +487/578 Test #377: plm-bsp-regularize-numeric-check ...... Passed 0.01 sec +test 381 + Start 381: plm-bsp-landmark-b-check + +381: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +381: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +381: Test timeout computed to be: 1500 +488/578 Test #371: plm-bsp-regularize-none-check ......... Passed 0.03 sec test 384 Start 384: plm-bsp-landmark-c-check 384: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 384: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 384: Test timeout computed to be: 1500 +378: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +378: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a.txt +378: EXPECTED_ERRNO is +381: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt +381: -- REGEX is AVE *([-0-9.]*) +381: -- LOWER_THRESH is -991.5 +381: -- UPPER_THRESH is -991.0 +381: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| +381: -- PARSED_VALUE=|-991.355164| +381: Not an error +489/578 Test #381: plm-bsp-landmark-b-check .............. Passed 0.03 sec test 387 Start 387: plm-bsp-landmark-d-check 387: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 387: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 387: Test timeout computed to be: 1500 +384: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-stats.stdout.txt +384: -- REGEX is AVE *([-0-9.]*) +384: -- LOWER_THRESH is -991.5 +384: -- UPPER_THRESH is -991.0 +384: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| +384: -- PARSED_VALUE=|-991.355164| +384: Not an error +490/578 Test #384: plm-bsp-landmark-c-check .............. Passed 0.02 sec test 390 Start 390: plm-bsp-landmark-e-check 390: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 390: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 390: Test timeout computed to be: 1500 -377: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-stats.stdout.txt -377: -- REGEX is MINJAC *([-0-9.]*) -377: -- LOWER_THRESH is 0.440 -377: -- UPPER_THRESH is 0.445 -377: -- PARSED VALUE=|Jacobian: MINJAC 0.443734 MAXJAC 1.03502| -377: -- PARSED_VALUE=|0.443734| -377: Not an error -378: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -378: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a.txt -378: EXPECTED_ERRNO is -487/578 Test #377: plm-bsp-regularize-numeric-check ...... Passed 0.05 sec +330: RETVAL: 0 +330: STDOUT: MIN -999.989990 AVE -743.121460 MAX 0.000000 NONZERO 46674 NUMVOX 54872 +330: +330: STDERR: +330: Not an error +390: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-stats.stdout.txt +390: -- REGEX is AVE *([-0-9.]*) +390: -- LOWER_THRESH is -991.5 +390: -- UPPER_THRESH is -991.0 +390: -- PARSED VALUE=|MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872| +390: -- PARSED_VALUE=|-991.396057| +390: Not an error +491/578 Test #330: plm-bsp-mse-o-stats ................... Passed 0.17 sec test 393 Start 393: plm-bsp-dcos-a-check 393: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-816" "-DUPPER_THRESH=-815" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 393: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 393: Test timeout computed to be: 1500 -381: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt -381: -- REGEX is AVE *([-0-9.]*) -381: -- LOWER_THRESH is -991.5 -381: -- UPPER_THRESH is -991.0 -381: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| -381: -- PARSED_VALUE=|-991.355164| -381: Not an error -488/578 Test #381: plm-bsp-landmark-b-check .............. Passed 0.05 sec -test 396 - Start 396: plm-bsp-dcos-b-check - -396: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -396: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -396: Test timeout computed to be: 1500 +332: RETVAL: 0 +332: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 +332: +332: STDERR: +332: Not an error 387: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-stats.stdout.txt 387: -- REGEX is AVE *([-0-9.]*) 387: -- LOWER_THRESH is -991.5 @@ -21518,35 +21580,33 @@ 387: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| 387: -- PARSED_VALUE=|-991.355164| 387: Not an error -246: RETVAL: 0 -246: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha -246: -246: STDERR: -246: Not an error -489/578 Test #387: plm-bsp-landmark-d-check .............. Passed 0.03 sec -390: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-stats.stdout.txt -390: -- REGEX is AVE *([-0-9.]*) -390: -- LOWER_THRESH is -991.5 -390: -- UPPER_THRESH is -991.0 +334: RETVAL: 0 +334: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 +334: +334: STDERR: +334: Not an error +336: RETVAL: 0 +336: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 +336: +336: STDERR: +336: Not an error +492/578 Test #332: plm-bsp-mse-p-stats ................... Passed 0.16 sec +493/578 Test #334: plm-bsp-mse-q-stats ................... Passed 0.16 sec +494/578 Test #387: plm-bsp-landmark-d-check .............. Passed 0.03 sec +495/578 Test #390: plm-bsp-landmark-e-check .............. Passed 0.02 sec +496/578 Test #336: plm-bsp-mse-r-stats ................... Passed 0.16 sec +test 396 + Start 396: plm-bsp-dcos-b-check + +396: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +396: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +396: Test timeout computed to be: 1500 test 399 Start 399: plm-bsp-dcos-c-check 399: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-816" "-DUPPER_THRESH=-815" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 399: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 399: Test timeout computed to be: 1500 -390: -- PARSED VALUE=|MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872| -390: -- PARSED_VALUE=|-991.396057| -390: Not an error -384: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-stats.stdout.txt -384: -- REGEX is AVE *([-0-9.]*) -384: -- LOWER_THRESH is -991.5 -384: -- UPPER_THRESH is -991.0 -384: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| -384: -- PARSED_VALUE=|-991.355164| -384: Not an error -490/578 Test #246: plm-dmap-c ............................ Passed 0.44 sec -491/578 Test #390: plm-bsp-landmark-e-check .............. Passed 0.04 sec -492/578 Test #384: plm-bsp-landmark-c-check .............. Passed 0.05 sec test 402 Start 402: plm-bsp-dcos-d-check @@ -21565,13 +21625,6 @@ 408: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 408: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 408: Test timeout computed to be: 1500 -396: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt -396: -- REGEX is AVE *([-0-9.]*) -396: -- LOWER_THRESH is -796.8 -396: -- UPPER_THRESH is -795.8 -396: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| -396: -- PARSED_VALUE=|-796.376221| -396: Not an error 393: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-stats.stdout.txt 393: -- REGEX is AVE *([-0-9.]*) 393: -- LOWER_THRESH is -816 @@ -21579,6 +21632,20 @@ 393: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 393: -- PARSED_VALUE=|-815.591492| 393: Not an error +497/578 Test #393: plm-bsp-dcos-a-check .................. Passed 0.02 sec +test 411 + Start 411: plm-reg-multi-a-check + +411: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-22" "-DUPPER_THRESH=-18" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +411: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +411: Test timeout computed to be: 1500 +396: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt +396: -- REGEX is AVE *([-0-9.]*) +396: -- LOWER_THRESH is -796.8 +396: -- UPPER_THRESH is -795.8 +396: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| +396: -- PARSED_VALUE=|-796.376221| +396: Not an error 399: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-stats.stdout.txt 399: -- REGEX is AVE *([-0-9.]*) 399: -- LOWER_THRESH is -816 @@ -21586,27 +21653,20 @@ 399: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 399: -- PARSED_VALUE=|-815.591492| 399: Not an error -493/578 Test #393: plm-bsp-dcos-a-check .................. Passed 0.05 sec -494/578 Test #396: plm-bsp-dcos-b-check .................. Passed 0.04 sec -test 411 - Start 411: plm-reg-multi-a-check - -411: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-22" "-DUPPER_THRESH=-18" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -411: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -411: Test timeout computed to be: 1500 +498/578 Test #396: plm-bsp-dcos-b-check .................. Passed 0.02 sec test 414 Start 414: plm-reg-multi-b-check 414: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-987" "-DUPPER_THRESH=-984" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 414: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 414: Test timeout computed to be: 1500 -495/578 Test #399: plm-bsp-dcos-c-check .................. Passed 0.05 sec -test 417 - Start 417: plm-reg-dv-itk-translation-check - -417: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-467.1" "-DUPPER_THRESH=-366.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -417: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -417: Test timeout computed to be: 1500 +499/578 Test #399: plm-bsp-dcos-c-check .................. Passed 0.02 sec +350: RETVAL: 0 +350: STDOUT: MIN -999.995789 AVE -886.449097 MAX -1.453729 NONZERO 54872 NUMVOX 54872 +350: +350: STDERR: +350: Not an error +500/578 Test #350: plm-bsp-sm-multi-a-stats .............. Passed 0.15 sec 402: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-stats.stdout.txt 402: -- REGEX is AVE *([-0-9.]*) 402: -- LOWER_THRESH is -796.8 @@ -21614,6 +21674,13 @@ 402: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| 402: -- PARSED_VALUE=|-796.376221| 402: Not an error +501/578 Test #402: plm-bsp-dcos-d-check .................. Passed 0.02 sec +355: RETVAL: 0 +355: STDOUT: MIN -999.977539 AVE -731.734009 MAX 0.000000 NONZERO 46415 NUMVOX 54872 +355: +355: STDERR: +355: Not an error +502/578 Test #355: plm-bsp-resume-stats .................. Passed 0.13 sec 405: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-stats.stdout.txt 405: -- REGEX is AVE *([-0-9.]*) 405: -- LOWER_THRESH is -816 @@ -21621,8 +21688,13 @@ 405: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 405: -- PARSED_VALUE=|-815.591492| 405: Not an error -496/578 Test #402: plm-bsp-dcos-d-check .................. Passed 0.05 sec -497/578 Test #405: plm-bsp-dcos-e-check .................. Passed 0.04 sec +503/578 Test #405: plm-bsp-dcos-e-check .................. Passed 0.02 sec +test 417 + Start 417: plm-reg-dv-itk-translation-check + +417: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-467.1" "-DUPPER_THRESH=-366.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +417: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +417: Test timeout computed to be: 1500 test 418 Start 418: plm-reg-roi-a @@ -21635,54 +21707,6 @@ 419: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 419: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 419: Test timeout computed to be: 1500 -414: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-stats.stdout.txt -414: -- REGEX is AVE *([-0-9.]*) -414: -- LOWER_THRESH is -987 -414: -- UPPER_THRESH is -984 -414: -- PARSED VALUE=|MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872| -414: -- PARSED_VALUE=|-985.762146| -414: Not an error -334: RETVAL: 0 -334: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 -334: -334: STDERR: -334: Not an error -411: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt -411: -- REGEX is Mean: *([-0-9.]*) -411: -- LOWER_THRESH is -22 -411: -- UPPER_THRESH is -18 -411: -- PARSED VALUE=|Mean: -20.000 -0.000 -0.000| -411: -- PARSED_VALUE=|-20.000| -411: Not an error -336: RETVAL: 0 -336: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 -336: -336: STDERR: -336: Not an error -408: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-stats.stdout.txt -408: -- REGEX is AVE *([-0-9.]*) -408: -- LOWER_THRESH is -796.8 -408: -- UPPER_THRESH is -795.8 -408: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| -408: -- PARSED_VALUE=|-796.376221| -408: Not an error -417: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt -417: -- REGEX is AVE *([-0-9.]*) -417: -- LOWER_THRESH is -467.1 -417: -- UPPER_THRESH is -366.9 -417: -- PARSED VALUE=|MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872| -417: -- PARSED_VALUE=|-467.031616| -417: Not an error -498/578 Test #334: plm-bsp-mse-q-stats ................... Passed 0.29 sec -499/578 Test #336: plm-bsp-mse-r-stats ................... Passed 0.28 sec -500/578 Test #408: plm-bsp-dcos-f-check .................. Passed 0.05 sec -501/578 Test #411: plm-reg-multi-a-check ................. Passed 0.05 sec -502/578 Test #414: plm-reg-multi-b-check ................. Passed 0.04 sec -330: RETVAL: 0 -330: STDOUT: MIN -999.989990 AVE -743.121460 MAX 0.000000 NONZERO 46674 NUMVOX 54872 -330: -330: STDERR: -330: Not an error test 420 Start 420: plm-reg-roi-c @@ -21695,6 +21719,29 @@ 421: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 421: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 421: Test timeout computed to be: 1500 +408: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-stats.stdout.txt +408: -- REGEX is AVE *([-0-9.]*) +408: -- LOWER_THRESH is -796.8 +408: -- UPPER_THRESH is -795.8 +408: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| +408: -- PARSED_VALUE=|-796.376221| +408: Not an error +411: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt +411: -- REGEX is Mean: *([-0-9.]*) +411: -- LOWER_THRESH is -22 +411: -- UPPER_THRESH is -18 +411: -- PARSED VALUE=|Mean: -20.000 -0.000 -0.000| +411: -- PARSED_VALUE=|-20.000| +411: Not an error +414: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-stats.stdout.txt +414: -- REGEX is AVE *([-0-9.]*) +414: -- LOWER_THRESH is -987 +414: -- UPPER_THRESH is -984 +414: -- PARSED VALUE=|MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872| +414: -- PARSED_VALUE=|-985.762146| +414: Not an error +504/578 Test #408: plm-bsp-dcos-f-check .................. Passed 0.02 sec +505/578 Test #411: plm-reg-multi-a-check ................. Passed 0.02 sec test 422 Start 422: plm-reg-roi-e @@ -21707,53 +21754,42 @@ 423: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-stiffness-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=register;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 423: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 423: Test timeout computed to be: 1500 +417: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt +417: -- REGEX is AVE *([-0-9.]*) +417: -- LOWER_THRESH is -467.1 +417: -- UPPER_THRESH is -366.9 +417: -- PARSED VALUE=|MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872| +417: -- PARSED_VALUE=|-467.031616| +417: Not an error +418: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +418: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a.txt +418: EXPECTED_ERRNO is +506/578 Test #414: plm-reg-multi-b-check ................. Passed 0.02 sec +507/578 Test #417: plm-reg-dv-itk-translation-check ...... Passed 0.01 sec test 426 Start 426: plm-reg-process-a-check 426: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-491.0" "-DUPPER_THRESH=-490.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 426: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 426: Test timeout computed to be: 1500 -418: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -418: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a.txt -418: EXPECTED_ERRNO is -332: RETVAL: 0 -332: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 -332: -332: STDERR: -332: Not an error -419: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -419: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b.txt -419: EXPECTED_ERRNO is -420: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -420: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c.txt -420: EXPECTED_ERRNO is -422: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -422: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e.txt -422: EXPECTED_ERRNO is -503/578 Test #330: plm-bsp-mse-o-stats ................... Passed 0.33 sec -504/578 Test #332: plm-bsp-mse-p-stats ................... Passed 0.32 sec -505/578 Test #417: plm-reg-dv-itk-translation-check ...... Passed 0.06 sec test 429 Start 429: plm-reg-trans-a-check 429: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-661.75" "-DUPPER_THRESH=-661.65" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 429: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 429: Test timeout computed to be: 1500 -test 432 - Start 432: plm-reg-trans-b-check - -432: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-661.75" "-DUPPER_THRESH=-661.65" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -432: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -432: Test timeout computed to be: 1500 -test 435 - Start 435: plm-reg-trans-mi-a-check - -435: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-612.75" "-DUPPER_THRESH=-612.60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -435: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -435: Test timeout computed to be: 1500 +419: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +419: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b.txt +419: EXPECTED_ERRNO is +420: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +420: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c.txt +420: EXPECTED_ERRNO is 421: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 421: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d.txt 421: EXPECTED_ERRNO is +422: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +422: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e.txt +422: EXPECTED_ERRNO is 426: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a-stats.stdout.txt 426: -- REGEX is AVE *([-0-9.]*) 426: -- LOWER_THRESH is -491.0 @@ -21761,13 +21797,13 @@ 426: -- PARSED VALUE=|MIN -500.000000 AVE -490.647552 MAX 0.000000 NONZERO 54871 NUMVOX 54872| 426: -- PARSED_VALUE=|-490.647552| 426: Not an error -506/578 Test #426: plm-reg-process-a-check ............... Passed 0.03 sec -test 438 - Start 438: plm-reg-autores-a-check +508/578 Test #426: plm-reg-process-a-check ............... Passed 0.01 sec +test 432 + Start 432: plm-reg-trans-b-check -438: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-597.6" "-DUPPER_THRESH=-597.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -438: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -438: Test timeout computed to be: 1500 +432: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-661.75" "-DUPPER_THRESH=-661.65" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +432: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +432: Test timeout computed to be: 1500 423: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 423: PARMS is register;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a.txt 423: EXPECTED_ERRNO is @@ -21778,6 +21814,13 @@ 429: -- PARSED VALUE=|MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872| 429: -- PARSED_VALUE=|-661.690491| 429: Not an error +509/578 Test #429: plm-reg-trans-a-check ................. Passed 0.01 sec +test 435 + Start 435: plm-reg-trans-mi-a-check + +435: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-612.75" "-DUPPER_THRESH=-612.60" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +435: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +435: Test timeout computed to be: 1500 432: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b-stats.stdout.txt 432: -- REGEX is AVE *([-0-9.]*) 432: -- LOWER_THRESH is -661.75 @@ -21785,6 +21828,13 @@ 432: -- PARSED VALUE=|MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872| 432: -- PARSED_VALUE=|-661.690491| 432: Not an error +510/578 Test #432: plm-reg-trans-b-check ................. Passed 0.01 sec +test 438 + Start 438: plm-reg-autores-a-check + +438: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-597.6" "-DUPPER_THRESH=-597.5" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +438: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +438: Test timeout computed to be: 1500 435: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a-stats.stdout.txt 435: -- REGEX is AVE *([-0-9.]*) 435: -- LOWER_THRESH is -612.75 @@ -21792,27 +21842,13 @@ 435: -- PARSED VALUE=|MIN -999.826416 AVE -612.681030 MAX 0.000000 NONZERO 39701 NUMVOX 54872| 435: -- PARSED_VALUE=|-612.681030| 435: Not an error -507/578 Test #429: plm-reg-trans-a-check ................. Passed 0.03 sec +511/578 Test #435: plm-reg-trans-mi-a-check .............. Passed 0.02 sec test 441 Start 441: plm-reg-autores-b-check 441: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-597.5" "-DUPPER_THRESH=-597.4" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 441: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 441: Test timeout computed to be: 1500 -508/578 Test #432: plm-reg-trans-b-check ................. Passed 0.04 sec -test 442 - Start 442: plm-reg-point-dmap-a - -442: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-point-dmap-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -442: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -442: Test timeout computed to be: 1500 -509/578 Test #435: plm-reg-trans-mi-a-check .............. Passed 0.04 sec -test 445 - Start 445: plm-compose-a-warp - -445: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -445: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -445: Test timeout computed to be: 1500 438: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a-stats.stdout.txt 438: -- REGEX is AVE *([-0-9.]*) 438: -- LOWER_THRESH is -597.6 @@ -21820,91 +21856,13 @@ 438: -- PARSED VALUE=|MIN -999.770874 AVE -597.535889 MAX 0.000000 NONZERO 38880 NUMVOX 54872| 438: -- PARSED_VALUE=|-597.535889| 438: Not an error -441: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b-stats.stdout.txt -441: -- REGEX is AVE *([-0-9.]*) -441: -- LOWER_THRESH is -597.5 -441: -- UPPER_THRESH is -597.4 -441: -- PARSED VALUE=|MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872| -441: -- PARSED_VALUE=|-597.450806| -441: Not an error -510/578 Test #441: plm-reg-autores-b-check ............... Passed 0.03 sec -test 447 - Start 447: plm-compose-a-check - -447: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -447: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -447: Test timeout computed to be: 1500 -511/578 Test #438: plm-reg-autores-a-check ............... Passed 0.05 sec -test 449 - Start 449: plm-compose-b-warp - -449: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -449: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -449: Test timeout computed to be: 1500 -442: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -442: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt -442: EXPECTED_ERRNO is -445: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -445: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha -445: EXPECTED_ERRNO is -350: RETVAL: 0 -350: STDOUT: MIN -999.995789 AVE -886.449097 MAX -1.453729 NONZERO 54872 NUMVOX 54872 -350: -350: STDERR: -350: Not an error -447: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt -447: -- REGEX is Mean: *([-0-9.]*) -447: -- LOWER_THRESH is 13.75 -447: -- UPPER_THRESH is 13.85 -447: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| -447: -- PARSED_VALUE=|13.794| -355: RETVAL: 0 -355: STDOUT: MIN -999.977539 AVE -731.734009 MAX 0.000000 NONZERO 46415 NUMVOX 54872 -355: -355: STDERR: -355: Not an error -447: Not an error -512/578 Test #355: plm-bsp-resume-stats .................. Passed 0.37 sec -513/578 Test #447: plm-compose-a-check ................... Passed 0.04 sec -test 451 - Start 451: plm-compose-b-check - -451: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -451: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -451: Test timeout computed to be: 1500 -test 453 - Start 453: plm-compose-c-warp - -453: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -453: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -453: Test timeout computed to be: 1500 -449: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -449: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha -449: EXPECTED_ERRNO is -514/578 Test #350: plm-bsp-sm-multi-a-stats .............. Passed 0.40 sec -test 455 - Start 455: plm-compose-c-check - -455: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=12.5" "-DUPPER_THRESH=12.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -455: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -455: Test timeout computed to be: 1500 -451: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt -451: -- REGEX is Mean: *([-0-9.]*) -451: -- LOWER_THRESH is 13.75 -451: -- UPPER_THRESH is 13.85 -451: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| -451: -- PARSED_VALUE=|13.794| -451: Not an error -453: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -453: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha -453: EXPECTED_ERRNO is -515/578 Test #451: plm-compose-b-check ................... Passed 0.05 sec -test 458 - Start 458: plm-resample-a-check +512/578 Test #438: plm-reg-autores-a-check ............... Passed 0.01 sec +test 442 + Start 442: plm-reg-point-dmap-a -458: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -458: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -458: Test timeout computed to be: 1500 +442: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-point-dmap-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +442: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +442: Test timeout computed to be: 1500 364: RETVAL: 0 364: STDOUT: Loading fixed image [0]: gauss-1.mha 364: Loading moving image [0]: gauss-2.mha @@ -21935,13 +21893,13 @@ 364: Setting nmax, mmax = 375 21 364: >>> START 364: This problem is unconstrained. -364: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.002 s ] +364: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.001 s ] 364: CMIN 0.00 CAVG 0.00 CMAX 0.00 364: LSD 0.00 -364: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.001 s ] +364: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.006 s ] 364: CMIN -0.07 CAVG 0.01 CMAX 0.68 364: LSD 1.00 -364: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.001 s ] +364: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.006 s ] 364: CMIN -0.35 CAVG 0.05 CMAX 3.40 364: LSD 5.00 364: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.001 s ] @@ -21961,56 +21919,38 @@ 364: cdims = (5 5 5) 364: ** Registration worker thread finished. 364: Writing transformation ... -364: Load: 0.0561581 -364: Run: 0.0349159 -364: Save: 0.0152061 -364: Total: 0.10628 +364: Load: 0.0192451 +364: Run: 0.025363 +364: Save: 0.00212789 +364: Total: 0.046736 364: Finished! 364: 364: STDERR: 364: Not an error -516/578 Test #364: plm-bsp-itk-output .................... Passed 0.40 sec -test 461 - Start 461: plm-resample-b-check - -461: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -461: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -461: Test timeout computed to be: 1500 -458: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt -458: -- REGEX is AVE *([-0-9.]*) -458: -- LOWER_THRESH is -879.0 -458: -- UPPER_THRESH is -878.0 -458: -- PARSED VALUE=|MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859| -458: -- PARSED_VALUE=|-878.686035| -458: Not an error -455: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt -455: -- REGEX is Mean: *([-0-9.]*) -455: -- LOWER_THRESH is 12.5 -455: -- UPPER_THRESH is 12.6 -455: -- PARSED VALUE=|Mean: 12.523 -0.008 -0.008| -455: -- PARSED_VALUE=|12.523| -455: Not an error -517/578 Test #458: plm-resample-a-check .................. Passed 0.03 sec -test 464 - Start 464: plm-resample-c-check +441: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b-stats.stdout.txt +441: -- REGEX is AVE *([-0-9.]*) +441: -- LOWER_THRESH is -597.5 +441: -- UPPER_THRESH is -597.4 +441: -- PARSED VALUE=|MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872| +513/578 Test #364: plm-bsp-itk-output .................... Passed 0.18 sec +441: -- PARSED_VALUE=|-597.450806| +441: Not an error +test 445 + Start 445: plm-compose-a-warp -464: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=6.67" "-DUPPER_THRESH=6.74" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -464: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -464: Test timeout computed to be: 1500 -518/578 Test #455: plm-compose-c-check ................... Passed 0.07 sec -test 467 - Start 467: plm-scale-a-check +445: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +445: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +445: Test timeout computed to be: 1500 +442: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +442: PARMS is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt +442: EXPECTED_ERRNO is +514/578 Test #441: plm-reg-autores-b-check ............... Passed 0.03 sec +test 447 + Start 447: plm-compose-a-check -467: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-3.735" "-DUPPER_THRESH=-3.730" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -467: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -467: Test timeout computed to be: 1500 -461: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt -461: -- REGEX is AVE *([-0-9.]*) -461: -- LOWER_THRESH is -879.0 -461: -- UPPER_THRESH is -878.0 -461: -- PARSED VALUE=|MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000| -461: -- PARSED_VALUE=|-878.621277| -461: Not an error +447: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +447: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +447: Test timeout computed to be: 1500 378: RETVAL: 0 378: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 378: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha @@ -22067,11 +22007,11 @@ 378: MSE 2923.708 LM 437.617 378: CMIN -0.50 CAVG -0.00 CMAX 0.07 378: LSD 1.00 -378: [ 0, 2] SCORE 3181.879 NV 6859 GM 79.422 GN 23.5 [ 0.006 s ] +378: [ 0, 2] SCORE 3181.879 NV 6859 GM 79.422 GN 23.5 [ 0.002 s ] 378: MSE 2777.757 LM 404.122 378: CMIN -2.48 CAVG -0.01 CMAX 0.34 378: LSD 5.00 -378: [ 0, 3] SCORE 2557.441 NV 6859 GM 62.038 GN 18.9 [ 0.008 s ] +378: [ 0, 3] SCORE 2557.441 NV 6859 GM 62.038 GN 18.9 [ 0.002 s ] 378: MSE 2271.265 LM 286.176 378: CMIN -10.41 CAVG -0.05 CMAX 1.44 378: LSD 21.00 @@ -22113,49 +22053,297 @@ 378: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a-warped.fcsv 378: Saving vf... 378: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a-vf.mha -378: Load: 0.0443261 -378: Run: 0.0395761 -378: Save: 0.0742228 -378: Total: 0.158125 +378: Load: 0.018491 +378: Run: 0.0146999 +378: Save: 0.0201359 +378: Total: 0.0533268 378: Finished! 378: 378: STDERR: 378: Not an error -519/578 Test #378: plm-bsp-landmark-a .................... Passed 0.39 sec -520/578 Test #461: plm-resample-b-check .................. Passed 0.04 sec +515/578 Test #378: plm-bsp-landmark-a .................... Passed 0.17 sec +test 449 + Start 449: plm-compose-b-warp + +449: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +449: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +449: Test timeout computed to be: 1500 +445: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +445: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha +445: EXPECTED_ERRNO is +447: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt +447: -- REGEX is Mean: *([-0-9.]*) +447: -- LOWER_THRESH is 13.75 +447: -- UPPER_THRESH is 13.85 +447: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| +447: -- PARSED_VALUE=|13.794| +447: Not an error +516/578 Test #447: plm-compose-a-check ................... Passed 0.02 sec +test 451 + Start 451: plm-compose-b-check + +451: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +451: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +451: Test timeout computed to be: 1500 +451: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt +451: -- REGEX is Mean: *([-0-9.]*) +451: -- LOWER_THRESH is 13.75 +451: -- UPPER_THRESH is 13.85 +451: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| +451: -- PARSED_VALUE=|13.794| +451: Not an error +517/578 Test #451: plm-compose-b-check ................... Passed 0.01 sec +test 453 + Start 453: plm-compose-c-warp + +453: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +453: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +453: Test timeout computed to be: 1500 +449: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +449: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha +449: EXPECTED_ERRNO is +453: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +453: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha +453: EXPECTED_ERRNO is +419: RETVAL: 0 +419: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha +419: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha +419: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha +419: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha +419: Launching registration worker thread +419: Inside registration worker thread +419: Doing registration stage +419: [1] xf_in->m_type = 0, xf_out->m_type = 0 +419: [2] xf_out->m_type = 1, xf_in->m_type = 0 +419: Doing registration stage +419: [1] xf_in->m_type = 1, xf_out->m_type = 0 +419: Fixed image for this stage: +419: Dim = 15 25 15 +419: Origin = -14 -24 -14 +419: Spacing = 2 2 2 +419: Direction Cosines = +419: 1 0 0 +419: 0 1 0 +419: 0 0 1 +419: Moving image for this stage: +419: Dim = 15 25 15 +419: Origin = -14 -24 -14 +419: Spacing = 2 2 2 +419: Direction Cosines = +419: 1 0 0 +419: 0 1 0 +419: 0 0 1 +419: Initial Parameters = [0, 0, 0] +419: Starting ITK registration +419: StartEvent: [0, 0, 0] +419: EndEvent: [0, 0, 0] +419: RegularStepGradientDescentOptimizer: Gradient magnitude tolerance met after 0 iterations. Gradient magnitude (0) is less than gradient magnitude tolerance (0.0001). +419: ITK registration complete +419: [2] xf_out->m_type = 1, xf_in->m_type = 1 +419: ** Registration worker thread finished. +419: Writing transformation ... +419: Warping... +419: plm_warp_itk: xform_to_itk_vf +419: plm_warp_itk: convert_to_itk +419: plm_warp_itk: warping... +419: Saving image... +419: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-img.mha +419: Saving vf... +419: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-vf.mha +419: Load: 0.0572729 +419: Run: 0.0179031 +419: Save: 0.0149179 +419: Total: 0.0900939 +419: Finished! +419: +419: STDERR: +419: Not an error +518/578 Test #419: plm-reg-roi-b ......................... Passed 0.23 sec +test 455 + Start 455: plm-compose-c-check + +455: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=12.5" "-DUPPER_THRESH=12.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +455: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +455: Test timeout computed to be: 1500 +455: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt +455: -- REGEX is Mean: *([-0-9.]*) +455: -- LOWER_THRESH is 12.5 +455: -- UPPER_THRESH is 12.6 +455: -- PARSED VALUE=|Mean: 12.523 -0.008 -0.008| +455: -- PARSED_VALUE=|12.523| +455: Not an error +519/578 Test #455: plm-compose-c-check ................... Passed 0.06 sec +test 458 + Start 458: plm-resample-a-check + +458: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +458: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +458: Test timeout computed to be: 1500 +458: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt +458: -- REGEX is AVE *([-0-9.]*) +458: -- LOWER_THRESH is -879.0 +458: -- UPPER_THRESH is -878.0 +458: -- PARSED VALUE=|MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859| +458: -- PARSED_VALUE=|-878.686035| +458: Not an error +520/578 Test #458: plm-resample-a-check .................. Passed 0.02 sec +test 461 + Start 461: plm-resample-b-check + +461: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +461: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +461: Test timeout computed to be: 1500 +461: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt +461: -- REGEX is AVE *([-0-9.]*) +461: -- LOWER_THRESH is -879.0 +461: -- UPPER_THRESH is -878.0 +461: -- PARSED VALUE=|MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000| +461: -- PARSED_VALUE=|-878.621277| +461: Not an error +420: RETVAL: 0 +420: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha +420: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha +420: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha +420: Launching registration worker thread +420: Inside registration worker thread +420: Doing registration stage +420: [1] xf_in->m_type = 0, xf_out->m_type = 0 +420: RESAMPLE 1 1: (2 2 2), (2 2 2) +420: RESAMPLE 1 1: (2 2 2), (2 2 2) +420: volume_calc_grad complete. +420: bspline_xform_initialize +420: rdims = (3,5,3) +420: vox_per_rgn = (5,5,5) +420: cdims = (6 8 6) +420: Algorithm flavor = g +420: Threading = 0 +420: Regularization: flavor = c lambda = 0.100000 +420: Regularizer initialized +420: >> Checking JH allocation +420: BSPLINE PARMS +420: max_its = 10 +420: max_feval = 10 +420: BSPLINE XFORM HEADER +420: vox_per_rgn = 5 5 5 +420: roi_offset = 0 0 0 +420: roi_dim = 15 25 15 +420: img_dc = 1 0 0 0 1 0 0 0 1 +420: BST METRICS +420: MET 110110 MSE 1.000000 +420: Setting nmax, mmax = 864 31 +420: >>> START +420: This problem is unconstrained. +420: [ 0, 0] SCORE 0.0000000 NV 1690 GM 0.000 GN 0 [ 0.072 s ] +420: MSE 0.0000000 RM 0.000 [ 0.024 | 0.048 ] +420: CMIN 0.00 CAVG 0.00 CMAX 0.00 +420: LSD 0.00 +420: * * * +420: +420: Tit = total number of iterations +420: Tnf = total number of function evaluations +420: Tnint = total number of segments explored during Cauchy searches +420: Skip = number of BFGS updates skipped +420: Nact = number of active bounds at final generalized Cauchy point +420: Projg = norm of the final projected gradient +420: F = final function value +420: +420: * * * +420: N Tit Tnf Tnint Skip Nact Projg F +420: 864 0 1 0 0 0 0 0 +420: CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL +420: Total User time 0 seconds. +420: [2] xf_out->m_type = 9, xf_in->m_type = 0 +420: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +420: bspline_xform_initialize +420: rdims = (3,5,3) +420: vox_per_rgn = (10,10,10) +420: cdims = (6 8 6) +420: ** Registration worker thread finished. +420: Writing transformation ... +420: Warping... +420: Running: plm_warp_native +420: Converting input image... +420: Converting xform... +420: bspline_xform_initialize +420: rdims = (3,5,3) +420: vox_per_rgn = (10,10,10) +420: cdims = (6 8 6) +420: Creating output vf... +420: Creating output volume... +420: Running native warper... +420: bspline_warp complete. +420: Back convert to original type... +420: > Convert vf to itk +420: > Conversion complete. +420: plm_warp_native is complete. +420: Saving image... +420: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-img.mha +420: Saving vf... +420: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-vf.mha +420: Load: 0.029881 +420: Run: 0.098449 +420: Save: 0.033479 +420: Total: 0.161809 +420: Finished! +420: +420: STDERR: +420: Not an error +521/578 Test #420: plm-reg-roi-c ......................... Passed 0.35 sec +522/578 Test #461: plm-resample-b-check .................. Passed 0.03 sec +test 464 + Start 464: plm-resample-c-check + +464: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=6.67" "-DUPPER_THRESH=6.74" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +464: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +464: Test timeout computed to be: 1500 +test 467 + Start 467: plm-scale-a-check + +467: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-3.735" "-DUPPER_THRESH=-3.730" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +467: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +467: Test timeout computed to be: 1500 +464: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt +464: -- REGEX is Mean: *([-0-9.]*) +464: -- LOWER_THRESH is 6.67 +464: -- UPPER_THRESH is 6.74 +464: -- PARSED VALUE=|Mean: 6.707 -0.405 -0.405| +464: -- PARSED_VALUE=|6.707| +464: Not an error +467: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt +467: -- REGEX is AVE *([-0-9.]*) +467: -- LOWER_THRESH is -3.735 +467: -- UPPER_THRESH is -3.730 +467: -- PARSED VALUE=|MIN -400.000000 AVE -3.732322 MAX 0.000000 NONZERO 512 NUMVOX 54872| +467: -- PARSED_VALUE=|-3.732322| +467: Not an error +523/578 Test #464: plm-resample-c-check .................. Passed 0.09 sec test 470 Start 470: plm-scale-vf-a-check 470: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=4.000" "-DUPPER_THRESH=4.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 470: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 470: Test timeout computed to be: 1500 +524/578 Test #467: plm-scale-a-check ..................... Passed 0.11 sec test 476 Start 476: plm-thumbnail-a-check 476: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=76.85" "-DUPPER_THRESH=76.95" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 476: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 476: Test timeout computed to be: 1500 -464: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt -464: -- REGEX is Mean: *([-0-9.]*) -464: -- LOWER_THRESH is 6.67 -464: -- UPPER_THRESH is 6.74 -464: -- PARSED VALUE=|Mean: 6.707 -0.405 -0.405| -464: -- PARSED_VALUE=|6.707| -464: Not an error -521/578 Test #464: plm-resample-c-check .................. Passed 0.04 sec +476: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a-stats.stdout.txt +476: -- REGEX is AVE *([-0-9.]*) +476: -- LOWER_THRESH is 76.85 +476: -- UPPER_THRESH is 76.95 +476: -- PARSED VALUE=|MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256| +476: -- PARSED_VALUE=|76.906250| +476: Not an error +525/578 Test #476: plm-thumbnail-a-check ................. Passed 0.03 sec test 479 Start 479: plm-thumbnail-b-check 479: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 479: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 479: Test timeout computed to be: 1500 -467: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt -467: -- REGEX is AVE *([-0-9.]*) -467: -- LOWER_THRESH is -3.735 -467: -- UPPER_THRESH is -3.730 -467: -- PARSED VALUE=|MIN -400.000000 AVE -3.732322 MAX 0.000000 NONZERO 512 NUMVOX 54872| -467: -- PARSED_VALUE=|-3.732322| -467: Not an error 470: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a-stats.stdout.txt 470: -- REGEX is Mean: *([-0-9.]*) 470: -- LOWER_THRESH is 4.000 @@ -22163,62 +22351,74 @@ 470: -- PARSED VALUE=|Mean: 4.000 0.000 0.000| 470: -- PARSED_VALUE=|4.000| 470: Not an error -522/578 Test #470: plm-scale-vf-a-check .................. Passed 0.02 sec +526/578 Test #470: plm-scale-vf-a-check .................. Passed 0.09 sec test 482 Start 482: plm-thumbnail-c-check 482: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=8.1" "-DUPPER_THRESH=8.3" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 482: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 482: Test timeout computed to be: 1500 -523/578 Test #467: plm-scale-a-check ..................... Passed 0.05 sec +479: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b-stats.stdout.txt +479: -- REGEX is AVE *([-0-9.]*) +479: -- LOWER_THRESH is 0.0 +479: -- UPPER_THRESH is 0.0 +479: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256| +479: -- PARSED_VALUE=|0.000000| +479: Not an error +527/578 Test #479: plm-thumbnail-b-check ................. Passed 0.06 sec test 485 Start 485: plm-intersect-check 485: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=729" "-DUPPER_THRESH=729" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 485: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 485: Test timeout computed to be: 1500 -476: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a-stats.stdout.txt -476: -- REGEX is AVE *([-0-9.]*) -476: -- LOWER_THRESH is 76.85 -476: -- UPPER_THRESH is 76.95 -476: -- PARSED VALUE=|MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256| -476: -- PARSED_VALUE=|76.906250| -476: Not an error -524/578 Test #476: plm-thumbnail-a-check ................. Passed 0.03 sec +453: RETVAL: 0 +453: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha) +453: Setting PIH from VF +453: PIH is: +453: Origin = -25.0000 -25.0000 -25.0000 +453: Size = 38 38 38 +453: Spacing = 1.3158 1.3158 1.3158 +453: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +453: Rt_study_warp: Warping m_img +453: plm_warp_itk: xform_to_itk_vf +453: plm_warp_itk: convert_to_itk +453: plm_warp_itk: warping... +453: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha) +453: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha +453: Rt_study_warp: warp and save ss. +453: Finished! +453: +453: STDERR: +453: Not an error +528/578 Test #453: plm-compose-c-warp .................... Passed 0.47 sec test 488 Start 488: plm-union-check 488: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1271" "-DUPPER_THRESH=1271" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 488: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 488: Test timeout computed to be: 1500 -479: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b-stats.stdout.txt -479: -- REGEX is AVE *([-0-9.]*) -479: -- LOWER_THRESH is 0.0 -479: -- UPPER_THRESH is 0.0 -479: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256| -479: -- PARSED_VALUE=|0.000000| -479: Not an error +485: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect-stats.stdout.txt +485: -- REGEX is NONZERO *([-0-9.]*) +485: -- LOWER_THRESH is 729 +485: -- UPPER_THRESH is 729 482: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c-stats.stdout.txt +485: -- PARSED VALUE=|MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872| +485: -- PARSED_VALUE=|729| +485: Not an error 482: -- REGEX is AVE *([-0-9.]*) 482: -- LOWER_THRESH is 8.1 482: -- UPPER_THRESH is 8.3 482: -- PARSED VALUE=|MIN 0.000000 AVE 8.203125 MAX 119.000000 NONZERO 32 NUMVOX 256| 482: -- PARSED_VALUE=|8.203125| -525/578 Test #479: plm-thumbnail-b-check ................. Passed 0.04 sec +482: Not an error +529/578 Test #485: plm-intersect-check ................... Passed 0.03 sec test 491 Start 491: plm-threshold-a-check 491: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.306" "-DUPPER_THRESH=0.308" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 491: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 491: Test timeout computed to be: 1500 -482: Not an error -526/578 Test #482: plm-thumbnail-c-check ................. Passed 0.06 sec -test 494 - Start 494: plm-threshold-b-check - -494: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.670" "-DUPPER_THRESH=0.672" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -494: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -494: Test timeout computed to be: 1500 488: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union-stats.stdout.txt 488: -- REGEX is NONZERO *([-0-9.]*) 488: -- LOWER_THRESH is 1271 @@ -22226,13 +22426,46 @@ 488: -- PARSED VALUE=|MIN 0.000000 AVE 0.023163 MAX 1.000000 NONZERO 1271 NUMVOX 54872| 488: -- PARSED_VALUE=|1271| 488: Not an error -527/578 Test #488: plm-union-check ....................... Passed 0.07 sec +530/578 Test #482: plm-thumbnail-c-check ................. Passed 0.08 sec +test 494 + Start 494: plm-threshold-b-check + +494: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.670" "-DUPPER_THRESH=0.672" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +494: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +494: Test timeout computed to be: 1500 +531/578 Test #488: plm-union-check ....................... Passed 0.04 sec test 497 Start 497: plm-threshold-c-check 497: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1206" "-DUPPER_THRESH=1206" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 497: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 497: Test timeout computed to be: 1500 +445: RETVAL: 0 +445: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha) +445: Setting PIH from VF +445: PIH is: +445: Origin = -25.0000 -25.0000 -25.0000 +445: Size = 38 38 38 +445: Spacing = 1.3158 1.3158 1.3158 +445: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +445: Rt_study_warp: Warping m_img +445: plm_warp_itk: xform_to_itk_vf +445: plm_warp_itk: convert_to_itk +445: plm_warp_itk: warping... +445: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha) +445: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha +445: Rt_study_warp: warp and save ss. +445: Finished! +445: +445: STDERR: +445: Not an error +532/578 Test #445: plm-compose-a-warp .................... Passed 0.56 sec +test 498 + Start 498: plm-warp-pointset-a + +498: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +498: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +498: Test timeout computed to be: 1500 491: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a-stats.stdout.txt 491: -- REGEX is AVE *([-0-9.]*) 491: -- LOWER_THRESH is 0.306 @@ -22240,80 +22473,13 @@ 491: -- PARSED VALUE=|MIN 0.000000 AVE 0.306732 MAX 1.000000 NONZERO 16831 NUMVOX 54872| 491: -- PARSED_VALUE=|0.306732| 491: Not an error -485: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect-stats.stdout.txt -485: -- REGEX is NONZERO *([-0-9.]*) -485: -- LOWER_THRESH is 729 -485: -- UPPER_THRESH is 729 -485: -- PARSED VALUE=|MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872| -485: -- PARSED_VALUE=|729| -485: Not an error -528/578 Test #485: plm-intersect-check ................... Passed 0.09 sec -529/578 Test #491: plm-threshold-a-check ................. Passed 0.05 sec -test 498 - Start 498: plm-warp-pointset-a - -498: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -498: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -498: Test timeout computed to be: 1500 +533/578 Test #491: plm-threshold-a-check ................. Passed 0.05 sec test 499 Start 499: plm-warp-pointset-b 499: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 499: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 499: Test timeout computed to be: 1500 -419: RETVAL: 0 -419: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha -419: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha -419: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha -419: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha -419: Launching registration worker thread -419: Inside registration worker thread -419: Doing registration stage -419: [1] xf_in->m_type = 0, xf_out->m_type = 0 -419: [2] xf_out->m_type = 1, xf_in->m_type = 0 -419: Doing registration stage -419: [1] xf_in->m_type = 1, xf_out->m_type = 0 -419: Fixed image for this stage: -419: Dim = 15 25 15 -419: Origin = -14 -24 -14 -419: Spacing = 2 2 2 -419: Direction Cosines = -419: 1 0 0 -419: 0 1 0 -419: 0 0 1 -419: Moving image for this stage: -419: Dim = 15 25 15 -419: Origin = -14 -24 -14 -419: Spacing = 2 2 2 -419: Direction Cosines = -419: 1 0 0 -419: 0 1 0 -419: 0 0 1 -419: Initial Parameters = [0, 0, 0] -419: Starting ITK registration -419: StartEvent: [0, 0, 0] -419: EndEvent: [0, 0, 0] -419: RegularStepGradientDescentOptimizer: Gradient magnitude tolerance met after 0 iterations. Gradient magnitude (0) is less than gradient magnitude tolerance (0.0001). -419: ITK registration complete -419: [2] xf_out->m_type = 1, xf_in->m_type = 1 -419: ** Registration worker thread finished. -419: Writing transformation ... -419: Warping... -419: plm_warp_itk: xform_to_itk_vf -419: plm_warp_itk: convert_to_itk -419: plm_warp_itk: warping... -419: Saving image... -419: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-img.mha -419: Saving vf... -419: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-vf.mha -419: Load: 0.074703 -419: Run: 0.00765204 -419: Save: 0.0104301 -419: Total: 0.0927851 -419: Finished! -419: -419: STDERR: -419: Not an error 497: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c-stats.stdout.txt 497: -- REGEX is NONZERO *([-0-9.]*) 497: -- LOWER_THRESH is 1206 @@ -22321,31 +22487,47 @@ 497: -- PARSED VALUE=|MIN 0.000000 AVE 0.021978 MAX 1.000000 NONZERO 1206 NUMVOX 54872| 497: -- PARSED_VALUE=|1206| 497: Not an error -494: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt -494: -- REGEX is AVE *([-0-9.]*) -494: -- LOWER_THRESH is 0.670 -494: -- UPPER_THRESH is 0.672 -494: -- PARSED VALUE=|MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872| -494: -- PARSED_VALUE=|0.671290| -494: Not an error -530/578 Test #419: plm-reg-roi-b ......................... Passed 0.40 sec -531/578 Test #497: plm-threshold-c-check ................. Passed 0.04 sec +534/578 Test #497: plm-threshold-c-check ................. Passed 0.04 sec test 500 Start 500: plm-warp-pointset-c 500: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 500: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 500: Test timeout computed to be: 1500 +449: RETVAL: 0 +449: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha) +449: Setting PIH from VF +449: PIH is: +449: Origin = -25.0000 -25.0000 -25.0000 +449: Size = 38 38 38 +449: Spacing = 1.3158 1.3158 1.3158 +449: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 +449: Rt_study_warp: Warping m_img +449: plm_warp_itk: xform_to_itk_vf +449: plm_warp_itk: convert_to_itk +449: plm_warp_itk: warping... +449: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha) +449: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha +449: Rt_study_warp: warp and save ss. +449: Finished! +449: +449: STDERR: +449: Not an error +535/578 Test #449: plm-compose-b-warp .................... Passed 0.59 sec test 503 Start 503: plm-warp-a-check 503: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.77" "-DUPPER_THRESH=5.78" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 503: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 503: Test timeout computed to be: 1500 -499: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -499: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt -499: EXPECTED_ERRNO is -532/578 Test #494: plm-threshold-b-check ................. Passed 0.08 sec +494: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt +494: -- REGEX is AVE *([-0-9.]*) +494: -- LOWER_THRESH is 0.670 +494: -- UPPER_THRESH is 0.672 +494: -- PARSED VALUE=|MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872| +494: -- PARSED_VALUE=|0.671290| +494: Not an error +536/578 Test #494: plm-threshold-b-check ................. Passed 0.08 sec test 506 Start 506: plm-warp-b-check-1 @@ -22355,9 +22537,6 @@ 498: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 498: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv 498: EXPECTED_ERRNO is -500: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -500: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv -500: EXPECTED_ERRNO is 503: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-stats.stdout.txt 503: -- REGEX is Mean: *([-0-9.]*) 503: -- LOWER_THRESH is 5.77 @@ -22365,71 +22544,164 @@ 503: -- PARSED VALUE=|Mean: 5.773 0.002 0.002| 503: -- PARSED_VALUE=|5.773| 503: Not an error -533/578 Test #503: plm-warp-a-check ...................... Passed 0.07 sec +537/578 Test #503: plm-warp-a-check ...................... Passed 0.03 sec test 508 Start 508: plm-warp-b-check-2 508: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-775.7" "-DUPPER_THRESH=-775.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 508: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 508: Test timeout computed to be: 1500 -506: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-1.stdout.txt -506: -- REGEX is Mean: *([-0-9.]*) -506: -- LOWER_THRESH is 5.77 -506: -- UPPER_THRESH is 5.78 -506: -- PARSED VALUE=|Mean: 5.773 0.002 0.002| -506: -- PARSED_VALUE=|5.773| -506: Not an error -534/578 Test #506: plm-warp-b-check-1 .................... Passed 0.12 sec +500: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +500: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv +500: EXPECTED_ERRNO is +508: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-2.stdout.txt +508: -- REGEX is AVE *([-0-9.]*) +508: -- LOWER_THRESH is -775.7 +508: -- UPPER_THRESH is -775.6 +508: -- PARSED VALUE=|MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872| +508: -- PARSED_VALUE=|-775.668274| +508: Not an error +423: RETVAL: 0 +423: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha +423: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha +423: Loading fixed stiffness: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha +423: Launching registration worker thread +423: Inside registration worker thread +423: Doing registration stage +423: [1] xf_in->m_type = 0, xf_out->m_type = 0 +423: RESAMPLE 1 1: (2 2 2), (2 2 2) +423: RESAMPLE 1 1: (2 2 2), (2 2 2) +423: volume_calc_grad complete. +423: bspline_xform_initialize +423: Warning: vox_per_rgn was less than 4. +423: Warning: vox_per_rgn was less than 4. +423: Warning: vox_per_rgn was less than 4. +423: rdims = (5,5,5) +423: vox_per_rgn = (4,4,4) +423: cdims = (8 8 8) +423: RESAMPLE 1 1: (2 2 2), (2 2 2) +423: Algorithm flavor = g +423: Threading = 0 +423: Regularization: flavor = a lambda = 0.100000 +423: >> Checking JH allocation +423: BSPLINE PARMS +423: max_its = 5 +423: max_feval = 5 +423: BSPLINE XFORM HEADER +423: vox_per_rgn = 4 4 4 +423: roi_offset = 0 0 0 +423: roi_dim = 19 19 19 +423: img_dc = 1 0 0 0 1 0 0 0 1 +423: BST METRICS +423: MET 110100 MSE 1.000000 +423: Setting nmax, mmax = 1536 41 +423: >>> START +423: This problem is unconstrained. +423: [ 0, 0] SCORE 74227.273 NV 6859 GM 0.000 GN 188 [ 0.119 s ] +423: MSE 74227.273 RM 0.000 [ 0.059 | 0.060 ] +423: CMIN 0.00 CAVG 0.00 CMAX 0.00 +423: LSD 0.00 +423: [ 0, 1] SCORE 73948.398 NV 6859 GM 0.045 GN 187 [ 0.077 s ] +423: MSE 73948.391 RM 0.010 [ 0.023 | 0.054 ] +423: CMIN -0.14 CAVG -0.00 CMAX 0.15 +423: LSD 1.00 +423: [ 0, 2] SCORE 72846.922 NV 6859 GM 0.264 GN 183 [ 0.058 s ] +423: MSE 72846.680 RM 0.242 [ 0.022 | 0.037 ] +423: CMIN -0.69 CAVG -0.00 CMAX 0.76 +423: LSD 5.00 +423: [ 0, 3] SCORE 68660.922 NV 6859 GM 1.168 GN 166 [ 0.049 s ] +423: MSE 68656.656 RM 4.268 [ 0.019 | 0.030 ] +423: CMIN -2.91 CAVG -0.00 CMAX 3.18 +423: LSD 21.00 +423: [ 1, 4] SCORE 42095.320 NV 6859 GM -11.876 GN 58.8 [ 0.068 s ] +423: MSE 41780.070 RM 315.248 [ 0.025 | 0.043 ] +423: CMIN -25.44 CAVG -0.01 CMAX 25.37 +423: LSD 160.09 +423: [ 2, 5] SCORE 33075.488 NV 6859 GM 41.190 GN 77.9 [ 0.055 s ] +423: MSE 32300.393 RM 775.097 [ 0.016 | 0.039 ] +423: CMIN -39.12 CAVG 0.00 CMAX 38.06 +423: LSD 114.34 +423: [2] xf_out->m_type = 9, xf_in->m_type = 0 +423: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) +423: bspline_xform_initialize +423: rdims = (5,5,5) +423: vox_per_rgn = (8,8,8) +423: cdims = (8 8 8) +423: ** Registration worker thread finished. +423: Writing transformation ... +423: Warping... +423: Running: plm_warp_native +423: Converting input image... +423: Converting xform... +423: bspline_xform_initialize +423: rdims = (5,5,5) +423: vox_per_rgn = (8,8,8) +423: cdims = (8 8 8) +423: Creating output vf... +423: Creating output volume... +423: Running native warper... +423: bspline_warp complete. +423: Back convert to original type... +423: > Convert vf to itk +423: > Conversion complete. +423: plm_warp_native is complete. +423: Saving image... +423: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-img.mha +423: Saving vf... +423: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-vf.mha +423: Load: 0.0354941 +423: Run: 0.446977 +423: Save: 0.0779951 +423: Total: 0.560466 +423: Finished! +423: +423: STDERR: +423: Not an error +538/578 Test #423: plm-reg-stiffness-a ................... Passed 0.74 sec test 511 Start 511: plm-warp-c-check 511: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=9.2" "-DUPPER_THRESH=9.3" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 511: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 511: Test timeout computed to be: 1500 -511: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-stats.stdout.txt -511: -- REGEX is AVE *([-0-9.]*) -511: -- LOWER_THRESH is 9.2 -511: -- UPPER_THRESH is 9.3 -445: RETVAL: 0 -445: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha) -445: Setting PIH from VF -445: PIH is: -445: Origin = -25.0000 -25.0000 -25.0000 -445: Size = 38 38 38 -445: Spacing = 1.3158 1.3158 1.3158 -445: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -445: Rt_study_warp: Warping m_img -445: plm_warp_itk: xform_to_itk_vf -445: plm_warp_itk: convert_to_itk -445: plm_warp_itk: warping... -445: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha) -445: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha -445: Rt_study_warp: warp and save ss. -445: Finished! -445: -445: STDERR: -445: Not an error -535/578 Test #445: plm-compose-a-warp .................... Passed 0.48 sec +499: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +499: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt +499: EXPECTED_ERRNO is +539/578 Test #508: plm-warp-b-check-2 .................... Passed 0.05 sec test 514 Start 514: plm-warp-d-check 514: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=9.2" "-DUPPER_THRESH=9.3" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 514: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 514: Test timeout computed to be: 1500 -508: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-2.stdout.txt -508: -- REGEX is AVE *([-0-9.]*) -508: -- LOWER_THRESH is -775.7 -508: -- UPPER_THRESH is -775.6 -508: -- PARSED VALUE=|MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872| -508: -- PARSED_VALUE=|-775.668274| -508: Not an error -536/578 Test #508: plm-warp-b-check-2 .................... Passed 0.11 sec +506: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-1.stdout.txt +506: -- REGEX is Mean: *([-0-9.]*) +506: -- LOWER_THRESH is 5.77 +506: -- UPPER_THRESH is 5.78 +506: -- PARSED VALUE=|Mean: 5.773 0.002 0.002| +506: -- PARSED_VALUE=|5.773| +506: Not an error +540/578 Test #506: plm-warp-b-check-1 .................... Passed 0.07 sec test 517 Start 517: plm-warp-f-check-1 517: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-stats-1.stdout.txt" "-DREGEX=Direction = *[-0-9.]* *[-0-9.]* *([-0-9.]*)" "-DLOWER_THRESH=-0.379" "-DUPPER_THRESH=-0.378" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 517: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 517: Test timeout computed to be: 1500 +514: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-stats.stdout.txt +514: -- REGEX is AVE *([-0-9.]*) +514: -- LOWER_THRESH is 9.2 +514: -- UPPER_THRESH is 9.3 +514: -- PARSED VALUE=|MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872| +514: -- PARSED_VALUE=|9.220003| +514: Not an error +541/578 Test #514: plm-warp-d-check ...................... Passed 0.02 sec +test 520 + Start 520: plm-warp-g-check-1 + +520: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-764.0" "-DUPPER_THRESH=-763.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +520: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +520: Test timeout computed to be: 1500 517: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-stats-1.stdout.txt 517: -- REGEX is Direction = *[-0-9.]* *[-0-9.]* *([-0-9.]*) 517: -- LOWER_THRESH is -0.379 @@ -22437,103 +22709,134 @@ 517: -- PARSED VALUE=|Direction = 0.9254 0.0180 -0.3785 0.1632 0.8826 0.4410 0.3420 -0.4698 0.8138| 517: -- PARSED_VALUE=|-0.3785| 517: Not an error -537/578 Test #517: plm-warp-f-check-1 .................... Passed 0.02 sec -test 520 - Start 520: plm-warp-g-check-1 - -520: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-764.0" "-DUPPER_THRESH=-763.6" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -520: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -520: Test timeout computed to be: 1500 +511: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-stats.stdout.txt +511: -- REGEX is AVE *([-0-9.]*) +511: -- LOWER_THRESH is 9.2 +511: -- UPPER_THRESH is 9.3 511: -- PARSED VALUE=|MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872| 511: -- PARSED_VALUE=|9.220003| 511: Not an error -520: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt -520: -- REGEX is AVE *([-0-9.]*) -520: -- LOWER_THRESH is -764.0 -520: -- UPPER_THRESH is -763.6 -453: RETVAL: 0 -453: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha) -453: Setting PIH from VF -453: PIH is: -453: Origin = -25.0000 -25.0000 -25.0000 -453: Size = 38 38 38 -453: Spacing = 1.3158 1.3158 1.3158 -453: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -453: Rt_study_warp: Warping m_img -453: plm_warp_itk: xform_to_itk_vf -453: plm_warp_itk: convert_to_itk -453: plm_warp_itk: warping... -453: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha) -453: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha -453: Rt_study_warp: warp and save ss. -453: Finished! -453: -453: STDERR: -538/578 Test #511: plm-warp-c-check ...................... Passed 0.13 sec -453: Not an error +542/578 Test #517: plm-warp-f-check-1 .................... Passed 0.01 sec test 523 Start 523: plm-warp-h-check-1 523: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=113.5" "-DUPPER_THRESH=114.0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 523: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 523: Test timeout computed to be: 1500 -520: -- PARSED VALUE=|MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872| -520: -- PARSED_VALUE=|-763.820862| -520: Not an error -514: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-stats.stdout.txt -514: -- REGEX is AVE *([-0-9.]*) -514: -- LOWER_THRESH is 9.2 -514: -- UPPER_THRESH is 9.3 -514: -- PARSED VALUE=|MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872| -514: -- PARSED_VALUE=|9.220003| -514: Not an error -539/578 Test #453: plm-compose-c-warp .................... Passed 0.56 sec -540/578 Test #514: plm-warp-d-check ...................... Passed 0.15 sec -541/578 Test #520: plm-warp-g-check-1 .................... Passed 0.10 sec +543/578 Test #511: plm-warp-c-check ...................... Passed 0.04 sec test 526 Start 526: plm-warp-i-check-1 526: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=114.4" "-DUPPER_THRESH=114.7" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 526: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 526: Test timeout computed to be: 1500 +442: RETVAL: 0 +442: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha +442: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha +442: Loading fixed pointset [1]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/sphere-7.fcsv +442: Loading moving image [1]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha +442: Launching registration worker thread +442: Inside registration worker thread +442: Doing registration stage +442: [1] xf_in->m_type = 0, xf_out->m_type = 0 +442: RESAMPLE 1 1: (1 1 1), (1 1 1) +442: RESAMPLE 1 1: (1 1 1), (1 1 1) +442: volume_calc_grad complete. +442: RESAMPLE 1 1: (1 1 1), (1 1 1) +442: volume_calc_grad complete. +442: bspline_xform_initialize +442: Warning: vox_per_rgn was less than 4. +442: Warning: vox_per_rgn was less than 4. +442: Warning: vox_per_rgn was less than 4. +442: rdims = (10,10,10) +442: vox_per_rgn = (4,4,4) +442: cdims = (13 13 13) +442: Algorithm flavor = g +442: Threading = 0 +442: >> Checking JH allocation +442: BSPLINE PARMS +442: max_its = 5 +442: max_feval = 5 +442: BSPLINE XFORM HEADER +442: vox_per_rgn = 4 4 4 +442: roi_offset = 0 0 0 +442: roi_dim = 38 38 38 +442: img_dc = 1 0 0 0 1 0 0 0 1 +442: BST METRICS +442: MET 110100 MSE 1.000000 +442: MET 010100 PDM 30.000000 +442: Setting nmax, mmax = 6591 83 +442: >>> START +442: This problem is unconstrained. +442: [ 0, 0] SCORE 5752.552 NV 54872 GM 5.543 GN 45.1 [ 0.072 s ] +442: MSE 5540.166 PDM 7.0795197 CMIN 0.00 CAVG 0.00 CMAX 0.00 +442: LSD 0.00 +442: [ 0, 1] SCORE 5663.708 NV 54872 GM 0.170 GN 43.8 [ 0.064 s ] +442: MSE 5452.803 PDM 7.0301509 CMIN -0.20 CAVG -0.00 CMAX 0.16 +442: LSD 1.00 +442: [ 0, 2] SCORE 5319.446 NV 54872 GM -0.447 GN 42 [ 0.064 s ] +442: MSE 5114.376 PDM 6.8356566 CMIN -1.00 CAVG -0.00 CMAX 0.78 +442: LSD 5.00 +442: [ 0, 3] SCORE 4111.230 NV 54872 GM -2.786 GN 35.2 [ 0.033 s ] +442: MSE 3928.063 PDM 6.1055741 CMIN -4.21 CAVG -0.00 CMAX 3.26 +442: LSD 21.00 +442: [ 1, 4] SCORE 1404.270 NV 54872 GM 1.576 GN 10.3 [ 0.052 s ] +442: MSE 1228.705 PDM 5.8521819 CMIN -19.53 CAVG 0.01 CMAX 16.23 +442: LSD 76.08 +442: [ 2, 5] SCORE 1282.464 NV 54872 GM 13.580 GN 4.68 [ 0.060 s ] +442: MSE 1058.280 PDM 7.4727950 CMIN -25.04 CAVG 0.01 CMAX 19.49 +442: LSD 32.00 +442: [2] xf_out->m_type = 9, xf_in->m_type = 0 +442: ** Registration worker thread finished. +442: Warping... +442: Running: plm_warp_native +442: Converting input image... +442: Converting xform... +442: bspline_xform_initialize +442: rdims = (10,10,10) +442: vox_per_rgn = (4,4,4) +442: cdims = (13 13 13) +442: Creating output vf... +442: Creating output volume... +442: Running native warper... +442: bspline_warp complete. +442: Back convert to original type... +442: > Convert vf to itk +442: > Conversion complete. +442: plm_warp_native is complete. +442: Saving image... +442: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-img.nrrd +442: Saving vf... +442: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-vf.nrrd +442: Load: 0.086427 +442: Run: 0.362672 +442: Save: 0.061944 +442: Total: 0.511043 +442: Finished! +442: +442: STDERR: +442: Not an error +520: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt +520: -- REGEX is AVE *([-0-9.]*) +520: -- LOWER_THRESH is -764.0 +520: -- UPPER_THRESH is -763.6 +520: -- PARSED VALUE=|MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872| +520: -- PARSED_VALUE=|-763.820862| +544/578 Test #442: plm-reg-point-dmap-a .................. Passed 0.74 sec +520: Not an error test 529 Start 529: plm-xf-convert-c 529: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 529: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 529: Test timeout computed to be: 1500 +545/578 Test #520: plm-warp-g-check-1 .................... Passed 0.02 sec test 533 Start 533: plm-xf-convert-d-warp-1-check 533: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-745.8" "-DUPPER_THRESH=-744.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 533: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 533: Test timeout computed to be: 1500 -449: RETVAL: 0 -449: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha) -449: Setting PIH from VF -449: PIH is: -449: Origin = -25.0000 -25.0000 -25.0000 -449: Size = 38 38 38 -449: Spacing = 1.3158 1.3158 1.3158 -449: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 -449: Rt_study_warp: Warping m_img -449: plm_warp_itk: xform_to_itk_vf -449: plm_warp_itk: convert_to_itk -449: plm_warp_itk: warping... -449: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha) -449: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha -449: Rt_study_warp: warp and save ss. -449: Finished! -449: -449: STDERR: -449: Not an error -542/578 Test #449: plm-compose-b-warp .................... Passed 0.64 sec -test 536 - Start 536: plm-xf-convert-d-warp-2-check - -536: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-751.0" "-DUPPER_THRESH=-744.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -536: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -536: Test timeout computed to be: 1500 526: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-stats-1.stdout.txt 526: -- REGEX is AVE *([-0-9.]*) 526: -- LOWER_THRESH is 114.4 @@ -22541,13 +22844,6 @@ 526: -- PARSED VALUE=|MIN 0.000000 AVE 114.545189 MAX 996.552368 NONZERO 43320 NUMVOX 54872| 526: -- PARSED_VALUE=|114.545189| 526: Not an error -543/578 Test #526: plm-warp-i-check-1 .................... Passed 0.05 sec -test 537 - Start 537: plm-xf-convert-e - -537: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -537: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -537: Test timeout computed to be: 1500 523: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-stats-1.stdout.txt 523: -- REGEX is AVE *([-0-9.]*) 523: -- LOWER_THRESH is 113.5 @@ -22555,121 +22851,40 @@ 523: -- PARSED VALUE=|MIN 0.000000 AVE 113.750511 MAX 996.000000 NONZERO 42867 NUMVOX 54872| 523: -- PARSED_VALUE=|113.750511| 523: Not an error +546/578 Test #523: plm-warp-h-check-1 .................... Passed 0.03 sec +test 536 + Start 536: plm-xf-convert-d-warp-2-check + +536: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-751.0" "-DUPPER_THRESH=-744.8" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +536: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +536: Test timeout computed to be: 1500 +533: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1-stats.stdout.txt +533: -- REGEX is AVE *([-0-9.]*) +533: -- LOWER_THRESH is -745.8 +533: -- UPPER_THRESH is -744.8 +533: -- PARSED VALUE=|MIN -999.979248 AVE -745.231567 MAX 0.000000 NONZERO 5851 NUMVOX 6859| +533: -- PARSED_VALUE=|-745.231567| +533: Not an error +547/578 Test #526: plm-warp-i-check-1 .................... Passed 0.03 sec +test 537 + Start 537: plm-xf-convert-e + +537: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +537: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +537: Test timeout computed to be: 1500 529: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 529: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125 529: EXPECTED_ERRNO is -420: RETVAL: 0 -420: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha -420: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha -420: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha -420: Launching registration worker thread -420: Inside registration worker thread -420: Doing registration stage -420: [1] xf_in->m_type = 0, xf_out->m_type = 0 -420: RESAMPLE 1 1: (2 2 2), (2 2 2) -420: RESAMPLE 1 1: (2 2 2), (2 2 2) -420: volume_calc_grad complete. -420: bspline_xform_initialize -420: rdims = (3,5,3) -420: vox_per_rgn = (5,5,5) -420: cdims = (6 8 6) -420: Algorithm flavor = g -420: Threading = 0 -420: Regularization: flavor = c lambda = 0.100000 -420: Regularizer initialized -420: >> Checking JH allocation -420: BSPLINE PARMS -420: max_its = 10 -420: max_feval = 10 -420: BSPLINE XFORM HEADER -420: vox_per_rgn = 5 5 5 -420: roi_offset = 0 0 0 -420: roi_dim = 15 25 15 -420: img_dc = 1 0 0 0 1 0 0 0 1 -420: BST METRICS -420: MET 110110 MSE 1.000000 -420: Setting nmax, mmax = 864 31 -420: >>> START -420: This problem is unconstrained. -420: [ 0, 0] SCORE 0.0000000 NV 1690 GM 0.000 GN 0 [ 0.173 s ] -420: MSE 0.0000000 RM 0.000 [ 0.085 | 0.088 ] -420: CMIN 0.00 CAVG 0.00 CMAX 0.00 -420: LSD 0.00 -420: * * * -420: -420: Tit = total number of iterations -420: Tnf = total number of function evaluations -420: Tnint = total number of segments explored during Cauchy searches -420: Skip = number of BFGS updates skipped -420: Nact = number of active bounds at final generalized Cauchy point -420: Projg = norm of the final projected gradient -420: F = final function value -420: -420: * * * -420: N Tit Tnf Tnint Skip Nact Projg F -420: 864 0 1 0 0 0 0 0 -420: CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL -420: Total User time 0 seconds. -420: [2] xf_out->m_type = 9, xf_in->m_type = 0 -420: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -420: bspline_xform_initialize -420: rdims = (3,5,3) -420: vox_per_rgn = (10,10,10) -420: cdims = (6 8 6) -420: ** Registration worker thread finished. -420: Writing transformation ... -420: Warping... -420: Running: plm_warp_native -420: Converting input image... -420: Converting xform... -420: bspline_xform_initialize -420: rdims = (3,5,3) -420: vox_per_rgn = (10,10,10) -420: cdims = (6 8 6) -420: Creating output vf... -420: Creating output volume... -420: Running native warper... -420: bspline_warp complete. -420: Back convert to original type... -420: > Convert vf to itk -420: > Conversion complete. -420: plm_warp_native is complete. -420: Saving image... -420: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-img.mha -420: Saving vf... -420: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-vf.mha -420: Load: 0.084269 -420: Run: 0.199617 -420: Save: 0.0901999 -420: Total: 0.374086 -420: Finished! -420: -420: STDERR: -420: Not an error -544/578 Test #420: plm-reg-roi-c ......................... Passed 0.79 sec +548/578 Test #533: plm-xf-convert-d-warp-1-check ......... Passed 0.02 sec test 538 Start 538: plm-xf-convert-f 538: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-f;--fixed-image;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--moving-image;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 538: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 538: Test timeout computed to be: 1500 -545/578 Test #523: plm-warp-h-check-1 .................... Passed 0.14 sec -test 539 - Start 539: plm-xf-convert-g - -539: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" -539: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -539: Test timeout computed to be: 1500 537: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 537: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom 537: EXPECTED_ERRNO is -533: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1-stats.stdout.txt -533: -- REGEX is AVE *([-0-9.]*) -533: -- LOWER_THRESH is -745.8 -533: -- UPPER_THRESH is -744.8 -533: -- PARSED VALUE=|MIN -999.979248 AVE -745.231567 MAX 0.000000 NONZERO 5851 NUMVOX 6859| -533: -- PARSED_VALUE=|-745.231567| -533: Not an error 538: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 538: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-f;--fixed-image;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--moving-image;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 538: EXPECTED_ERRNO is @@ -22680,13 +22895,32 @@ 536: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 536: -- PARSED_VALUE=|-745.347717| 536: Not an error -546/578 Test #536: plm-xf-convert-d-warp-2-check ......... Passed 0.13 sec +549/578 Test #536: plm-xf-convert-d-warp-2-check ......... Passed 0.09 sec +test 539 + Start 539: plm-xf-convert-g + +539: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" +539: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +539: Test timeout computed to be: 1500 +499: RETVAL: 0 +499: STDOUT: bspline_xform_initialize +499: rdims = (5,5,5) +499: vox_per_rgn = (8,8,8) +499: cdims = (8 8 8) +499: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt +499: +499: STDERR: +499: Not an error +550/578 Test #499: plm-warp-pointset-b ................... Passed 0.27 sec test 542 Start 542: plm-xf-convert-h-check 542: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h-stats.stdout.txt" "-DREGEX=Min: *([-0-9.]*)" "-DLOWER_THRESH=20" "-DUPPER_THRESH=20" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 542: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 542: Test timeout computed to be: 1500 +539: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +539: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom +539: EXPECTED_ERRNO is 498: RETVAL: 0 498: STDOUT: bspline_xform_initialize 498: rdims = (5,5,5) @@ -22696,8 +22930,13 @@ 498: 498: STDERR: 498: Not an error -547/578 Test #498: plm-warp-pointset-a ................... Passed 0.52 sec -548/578 Test #533: plm-xf-convert-d-warp-1-check ......... Passed 0.15 sec +500: RETVAL: 0 +500: STDOUT: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv +500: +500: STDERR: +500: Not an error +551/578 Test #498: plm-warp-pointset-a ................... Passed 0.30 sec +552/578 Test #500: plm-warp-pointset-c ................... Passed 0.27 sec test 545 Start 545: plm-xf-convert-i-check @@ -22710,9 +22949,20 @@ 548: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=0.000" "-DUPPER_THRESH=0.000" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 548: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 548: Test timeout computed to be: 1500 -539: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -539: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom -539: EXPECTED_ERRNO is +542: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h-stats.stdout.txt +542: -- REGEX is Min: *([-0-9.]*) +542: -- LOWER_THRESH is 20 +542: -- UPPER_THRESH is 20 +542: -- PARSED VALUE=|Min: 20.000 0.000 0.000| +542: -- PARSED_VALUE=|20.000| +542: Not an error +553/578 Test #542: plm-xf-convert-h-check ................ Passed 0.03 sec +test 551 + Start 551: xf-invert-vf-trans-1-check + +551: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-10.0" "-DUPPER_THRESH=-9.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +551: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +551: Test timeout computed to be: 1500 545: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-stats.stdout.txt 545: -- REGEX is Min: *([-0-9.]*) 545: -- LOWER_THRESH is 7.155 @@ -22720,13 +22970,111 @@ 545: -- PARSED VALUE=|Min: 7.161 -0.245 -0.245| 545: -- PARSED_VALUE=|7.161| 545: Not an error -549/578 Test #545: plm-xf-convert-i-check ................ Passed 0.03 sec -test 551 - Start 551: xf-invert-vf-trans-1-check +554/578 Test #545: plm-xf-convert-i-check ................ Passed 0.02 sec +test 553 + Start 553: xf-invert-vrs-a-check -551: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-10.0" "-DUPPER_THRESH=-9.9" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -551: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -551: Test timeout computed to be: 1500 +553: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm" "-DREGEX=^Parameters: *(.*)$" "-DMATCH_STRING=0 0 0 -20 0 0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" +553: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +553: Test timeout computed to be: 1500 +529: RETVAL: 0 +529: STDOUT: bspline_xform_initialize +529: rdims = (1,1,1) +529: vox_per_rgn = (4,4,4) +529: cdims = (4 4 4) +529: about to xform_convert +529: Converting to (itk) vector field +529: did xform_convert +529: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha +529: +529: STDERR: +529: Not an error +418: RETVAL: 0 +418: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha +418: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha +418: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha +418: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha +418: Launching registration worker thread +418: Inside registration worker thread +418: Doing registration stage +418: [1] xf_in->m_type = 0, xf_out->m_type = 0 +418: RESAMPLE 1 1: (1 1 1), (1 1 1) +418: RESAMPLE 1 1: (1 1 1), (1 1 1) +418: volume_calc_grad complete. +418: bspline_xform_initialize +418: Warning: vox_per_rgn was less than 4. +418: Warning: vox_per_rgn was less than 4. +418: Warning: vox_per_rgn was less than 4. +418: rdims = (10,10,10) +418: vox_per_rgn = (4,4,4) +418: cdims = (13 13 13) +418: Algorithm flavor = h +418: Threading = 0 +418: >> Checking JH allocation +418: >> Performing JH allocation +418: BSPLINE PARMS +418: max_its = 5 +418: max_feval = 5 +418: BSPLINE XFORM HEADER +418: vox_per_rgn = 4 4 4 +418: roi_offset = 0 0 0 +418: roi_dim = 38 38 38 +418: img_dc = 1 0 0 0 1 0 0 0 1 +418: BST METRICS +418: MET 110111 MI 1.000000 +418: >> Performing JH initialization +418: Setting nmax, mmax = 6591 83 +418: >>> START +418: This problem is unconstrained. +418: [ 0, 0] MI -0.0060547 NV 729 GM 0.008 GN 0.0011 [ 0.108 s ] +418: CMIN 0.01 CAVG 0.01 CMAX 0.01 +418: LSD 0.00 +418: [ 0, 1] MI -0.0496013 NV 569 GM -0.020 GN 0.00349 [ 0.112 s ] +418: CMIN -0.30 CAVG 0.01 CMAX 0.04 +418: LSD 1.00 +418: [ 1, 2] MI -0.0061482 NV 729 GM 0.000 GN 0.00024 [ 0.116 s ] +418: CMIN -0.30 CAVG 0.01 CMAX 0.05 +418: LSD 0.25 +418: [ 1, 3] MI -0.0496042 NV 569 GM -0.020 GN 0.00349 [ 0.127 s ] +418: CMIN -0.30 CAVG 0.01 CMAX 0.04 +418: LSD 0.00 +418: [ 1, 4] MI -0.0496071 NV 569 GM -0.020 GN 0.00349 [ 0.094 s ] +418: CMIN -0.30 CAVG 0.01 CMAX 0.04 +418: LSD 0.00 +418: [ 1, 5] MI -0.0020808 NV 629 GM -0.002 GN 0.000318 [ 0.115 s ] +418: CMIN -0.30 CAVG 0.01 CMAX 0.05 +418: LSD 0.12 +418: [2] xf_out->m_type = 9, xf_in->m_type = 0 +418: ** Registration worker thread finished. +418: Writing transformation ... +418: Warping... +418: Running: plm_warp_native +418: Converting input image... +418: Converting xform... +418: bspline_xform_initialize +418: rdims = (10,10,10) +418: vox_per_rgn = (4,4,4) +418: cdims = (13 13 13) +418: Creating output vf... +418: Creating output volume... +418: Running native warper... +418: bspline_warp complete. +418: Back convert to original type... +418: > Convert vf to itk +418: > Conversion complete. +418: plm_warp_native is complete. +418: Saving image... +418: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-img.mha +418: Saving vf... +418: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-vf.mha +418: Load: 0.033406 +418: Run: 0.68399 +418: Save: 0.072181 +418: Total: 0.789577 +418: Finished! +418: +418: STDERR: +418: Not an error 548: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1-stats.stdout.txt 548: -- REGEX is Mean abs: *([-0-9.]*) 548: -- LOWER_THRESH is 0.000 @@ -22734,41 +23082,34 @@ 548: -- PARSED VALUE=|Mean abs: 0.000 0.000 0.000| 548: -- PARSED_VALUE=|0.000| 548: Not an error -550/578 Test #548: xf-invert-vf-zero-1-check ............. Passed 0.05 sec -test 553 - Start 553: xf-invert-vrs-a-check - -553: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm" "-DREGEX=^Parameters: *(.*)$" "-DMATCH_STRING=0 0 0 -20 0 0" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckString.cmake" -553: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -553: Test timeout computed to be: 1500 -551: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt -551: -- REGEX is Mean: *([-0-9.]*) -551: -- LOWER_THRESH is -10.0 -551: -- UPPER_THRESH is -9.9 -551: -- PARSED VALUE=|Mean: -9.999 0.000 0.000| -551: -- PARSED_VALUE=|-9.999| -551: Not an error -551/578 Test #551: xf-invert-vf-trans-1-check ............ Passed 0.03 sec +555/578 Test #418: plm-reg-roi-a ......................... Passed 0.98 sec +556/578 Test #548: xf-invert-vf-zero-1-check ............. Passed 0.04 sec test 555 Start 555: xf-invert-vrs-b-check 555: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm" "-DREGEX=^Parameters: *([-0-9.]*) *0 *0 *0 *0 *0 *$" "-DLOWER_THRESH=-0.52361" "-DUPPER_THRESH=-0.52359" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 555: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 555: Test timeout computed to be: 1500 -542: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h-stats.stdout.txt -542: -- REGEX is Min: *([-0-9.]*) -542: -- LOWER_THRESH is 20 -542: -- UPPER_THRESH is 20 -542: -- PARSED VALUE=|Min: 20.000 0.000 0.000| -542: -- PARSED_VALUE=|20.000| -542: Not an error -552/578 Test #542: plm-xf-convert-h-check ................ Passed 0.11 sec test 558 Start 558: proton-dose-1-check 558: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.140" "-DUPPER_THRESH=0.145" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" 558: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 558: Test timeout computed to be: 1500 +551: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt +551: -- REGEX is Mean: *([-0-9.]*) +551: -- LOWER_THRESH is -10.0 +551: -- UPPER_THRESH is -9.9 +551: -- PARSED VALUE=|Mean: -9.999 0.000 0.000| +551: -- PARSED_VALUE=|-9.999| +551: Not an error +557/578 Test #529: plm-xf-convert-c ...................... Passed 0.19 sec +test 561 + Start 561: proton-dose-4a-check + +561: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +561: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +561: Test timeout computed to be: 1500 553: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm 553: -- REGEX is ^Parameters: *(.*)$ 553: -- MATCH_STRING is 0 0 0 -20 0 0 @@ -22777,23 +23118,13 @@ 553: -- LENGTH=13 553: -- |0 0 0 -20 0 0|0 0 0 -20 0 0| 553: Not an error -553/578 Test #553: xf-invert-vrs-a-check ................. Passed 0.05 sec -test 561 - Start 561: proton-dose-4a-check +558/578 Test #551: xf-invert-vf-trans-1-check ............ Passed 0.05 sec +test 564 + Start 564: proton-dose-4d-check -561: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -561: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -561: Test timeout computed to be: 1500 -499: RETVAL: 0 -499: STDOUT: bspline_xform_initialize -499: rdims = (5,5,5) -499: vox_per_rgn = (8,8,8) -499: cdims = (8 8 8) -499: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt -499: -499: STDERR: -499: Not an error -554/578 Test #499: plm-warp-pointset-b ................... Passed 0.65 sec +564: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.38" "-DUPPER_THRESH=0.39" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +564: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +564: Test timeout computed to be: 1500 558: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1-stats.stdout.txt 558: -- REGEX is AVE *([-0-9.]*) 558: -- LOWER_THRESH is 0.140 @@ -22801,19 +23132,6 @@ 558: -- PARSED VALUE=|MIN 0.000000 AVE 0.143515 MAX 70.000000 NONZERO 775 NUMVOX 216000| 558: -- PARSED_VALUE=|0.143515| 558: Not an error -test 564 - Start 564: proton-dose-4d-check - -564: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.38" "-DUPPER_THRESH=0.39" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -564: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -564: Test timeout computed to be: 1500 -555/578 Test #558: proton-dose-1-check ................... Passed 0.07 sec -test 567 - Start 567: proton-dose-5a-check - -567: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" -567: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing -567: Test timeout computed to be: 1500 555: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm 555: -- REGEX is ^Parameters: *([-0-9.]*) *0 *0 *0 *0 *0 *$ 555: -- LOWER_THRESH is -0.52361 @@ -22821,7 +23139,13 @@ 555: -- PARSED VALUE=|Parameters: -0.5236 0 0 0 0 0| 555: -- PARSED_VALUE=|-0.5236| 555: Not an error -556/578 Test #555: xf-invert-vrs-b-check ................. Passed 0.11 sec +559/578 Test #553: xf-invert-vrs-a-check ................. Passed 0.05 sec +test 567 + Start 567: proton-dose-5a-check + +567: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing/PlmCheckInterval.cmake" +567: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing +567: Test timeout computed to be: 1500 561: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a-stats.stdout.txt 561: -- REGEX is AVE *([-0-9.]*) 561: -- LOWER_THRESH is 0.26 @@ -22829,7 +23153,8 @@ 561: -- PARSED VALUE=|MIN 0.000000 AVE 0.266114 MAX 100.000000 NONZERO 932 NUMVOX 216000| 561: -- PARSED_VALUE=|0.266114| 561: Not an error -557/578 Test #561: proton-dose-4a-check .................. Passed 0.06 sec +560/578 Test #555: xf-invert-vrs-b-check ................. Passed 0.05 sec +561/578 Test #558: proton-dose-1-check ................... Passed 0.04 sec test 570 Start 570: proton-dose-5d-check @@ -22851,8 +23176,8 @@ 564: Not an error 537: RETVAL: 0 537: STDOUT: Loading fixed... -537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818335RTDOSE -537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818336RTSTRUCT +537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925889RTDOSE +537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925890RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. @@ -22869,8 +23194,8 @@ 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 -537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818335RTDOSE -537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818336RTSTRUCT +537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925889RTDOSE +537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925890RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. @@ -22888,8 +23213,8 @@ 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 537: Loading moving... -537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT +537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. @@ -22906,8 +23231,8 @@ 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 -537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT +537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. @@ -22934,8 +23259,17 @@ 537: 537: STDERR: 537: Not an error -558/578 Test #537: plm-xf-convert-e ...................... Passed 0.32 sec -559/578 Test #564: proton-dose-4d-check .................. Passed 0.05 sec +567: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt +567: -- REGEX is AVE *([-0-9.]*) +567: -- LOWER_THRESH is 0.26 +567: -- UPPER_THRESH is 0.27 +567: -- PARSED VALUE=|MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000| +567: -- PARSED_VALUE=|0.266122| +567: Not an error +562/578 Test #537: plm-xf-convert-e ...................... Passed 0.22 sec +563/578 Test #561: proton-dose-4a-check .................. Passed 0.05 sec +564/578 Test #564: proton-dose-4d-check .................. Passed 0.03 sec +565/578 Test #567: proton-dose-5a-check .................. Passed 0.02 sec test 575 Start 575: proton-dose-8d-stats @@ -22949,214 +23283,13 @@ 570: -- PARSED VALUE=|MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000| 570: -- PARSED_VALUE=|0.386816| 570: Not an error -560/578 Test #570: proton-dose-5d-check .................. Passed 0.03 sec -567: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt -567: -- REGEX is AVE *([-0-9.]*) -567: -- LOWER_THRESH is 0.26 -567: -- UPPER_THRESH is 0.27 -567: -- PARSED VALUE=|MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000| -567: -- PARSED_VALUE=|0.266122| -567: Not an error 573: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a-stats.stdout.txt -561/578 Test #567: proton-dose-5a-check .................. Passed 0.05 sec 573: -- REGEX is AVE *([-0-9.]*) 573: -- LOWER_THRESH is 0.26 573: -- UPPER_THRESH is 0.27 573: -- PARSED VALUE=|MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000| 573: -- PARSED_VALUE=|0.266122| 573: Not an error -562/578 Test #573: proton-dose-6a-check .................. Passed 0.03 sec -575: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -575: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha -575: EXPECTED_ERRNO is -539: RETVAL: 0 -539: STDOUT: Loading fixed... -539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT -539: Found DCM_ReferencedFrameOfReferenceSequence! -539: Found DCM_RTReferencedStudySequence! -539: Trying to load rt dose. -539: Load: DoseGridScaling = 0.000000 -539: RTDOSE: dim = 38 38 38 -539: ipp = -243.421005 -243.421005 -243.421005 -539: spc = 13.157900 13.157900 13.157900 -539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -539: Bits_alloc: 32 -539: Bits_stored: 32 -539: High_bit: 31 -539: Pixel_rep: 0 -539: rc = 1, length = 109744, npix = 54872 -539: Trying to load rt structure set. -539: Adding structure (1), Foreground -539: Structure 1 has color 255\0\0 -539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772101RTDOSE -539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55567.1791579442.772102RTSTRUCT -539: Found DCM_ReferencedFrameOfReferenceSequence! -539: Found DCM_RTReferencedStudySequence! -539: Trying to load rt dose. -539: Load: DoseGridScaling = 0.000000 -539: RTDOSE: dim = 38 38 38 -539: ipp = -243.421005 -243.421005 -243.421005 -539: spc = 13.157900 13.157900 13.157900 -539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -539: Bits_alloc: 32 -539: Bits_stored: 32 -539: High_bit: 31 -539: Pixel_rep: 0 -539: rc = 1, length = 109744, npix = 54872 -539: Trying to load rt structure set. -539: Adding structure (1), Foreground -539: Structure 1 has color 255\0\0 -539: Loading moving... -539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818335RTDOSE -539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818336RTSTRUCT -539: Found DCM_ReferencedFrameOfReferenceSequence! -539: Found DCM_RTReferencedStudySequence! -539: Trying to load rt dose. -539: Load: DoseGridScaling = 0.000000 -539: RTDOSE: dim = 38 38 38 -539: ipp = -243.421005 -243.421005 -243.421005 -539: spc = 13.157900 13.157900 13.157900 -539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -539: Bits_alloc: 32 -539: Bits_stored: 32 -539: High_bit: 31 -539: Pixel_rep: 0 -539: rc = 1, length = 109744, npix = 54872 -539: Trying to load rt structure set. -539: Adding structure (1), Foreground -539: Structure 1 has color 255\0\0 -539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818335RTDOSE -539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.55572.1791579442.818336RTSTRUCT -539: Found DCM_ReferencedFrameOfReferenceSequence! -539: Found DCM_RTReferencedStudySequence! -539: Trying to load rt dose. -539: Load: DoseGridScaling = 0.000000 -539: RTDOSE: dim = 38 38 38 -539: ipp = -243.421005 -243.421005 -243.421005 -539: spc = 13.157900 13.157900 13.157900 -539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -539: Bits_alloc: 32 -539: Bits_stored: 32 -539: High_bit: 31 -539: Pixel_rep: 0 -539: rc = 1, length = 109744, npix = 54872 -539: Trying to load rt structure set. -539: Adding structure (1), Foreground -539: Structure 1 has color 255\0\0 -539: Saving sro -539: Trying to save SRO: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g/dro.dcm -539: Done saving sro -539: -539: STDERR: -539: Not an error -500: RETVAL: 0 -500: STDOUT: Trying to save: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv -500: -500: STDERR: -500: Not an error -563/578 Test #500: plm-warp-pointset-c ................... Passed 0.84 sec -564/578 Test #539: plm-xf-convert-g ...................... Passed 0.43 sec -529: RETVAL: 0 -529: STDOUT: bspline_xform_initialize -529: rdims = (1,1,1) -529: vox_per_rgn = (4,4,4) -529: cdims = (4 4 4) -529: about to xform_convert -529: Converting to (itk) vector field -529: did xform_convert -529: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha -529: -529: STDERR: -529: Not an error -565/578 Test #529: plm-xf-convert-c ...................... Passed 0.53 sec -442: RETVAL: 0 -442: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha -442: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha -442: Loading fixed pointset [1]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/sphere-7.fcsv -442: Loading moving image [1]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha -442: Launching registration worker thread -442: Inside registration worker thread -442: Doing registration stage -442: [1] xf_in->m_type = 0, xf_out->m_type = 0 -442: RESAMPLE 1 1: (1 1 1), (1 1 1) -442: RESAMPLE 1 1: (1 1 1), (1 1 1) -442: volume_calc_grad complete. -442: RESAMPLE 1 1: (1 1 1), (1 1 1) -442: volume_calc_grad complete. -442: bspline_xform_initialize -442: Warning: vox_per_rgn was less than 4. -442: Warning: vox_per_rgn was less than 4. -442: Warning: vox_per_rgn was less than 4. -442: rdims = (10,10,10) -442: vox_per_rgn = (4,4,4) -442: cdims = (13 13 13) -442: Algorithm flavor = g -442: Threading = 0 -442: >> Checking JH allocation -442: BSPLINE PARMS -442: max_its = 5 -442: max_feval = 5 -442: BSPLINE XFORM HEADER -442: vox_per_rgn = 4 4 4 -442: roi_offset = 0 0 0 -442: roi_dim = 38 38 38 -442: img_dc = 1 0 0 0 1 0 0 0 1 -442: BST METRICS -442: MET 110100 MSE 1.000000 -442: MET 010100 PDM 30.000000 -442: Setting nmax, mmax = 6591 83 -442: >>> START -442: This problem is unconstrained. -442: [ 0, 0] SCORE 5752.552 NV 54872 GM 5.543 GN 45.1 [ 0.117 s ] -442: MSE 5540.166 PDM 7.0795197 CMIN 0.00 CAVG 0.00 CMAX 0.00 -442: LSD 0.00 -442: [ 0, 1] SCORE 5663.708 NV 54872 GM 0.170 GN 43.8 [ 0.080 s ] -442: MSE 5452.803 PDM 7.0301509 CMIN -0.20 CAVG -0.00 CMAX 0.16 -442: LSD 1.00 -442: [ 0, 2] SCORE 5319.446 NV 54872 GM -0.447 GN 42 [ 0.096 s ] -442: MSE 5114.376 PDM 6.8356566 CMIN -1.00 CAVG -0.00 CMAX 0.78 -442: LSD 5.00 -442: [ 0, 3] SCORE 4111.230 NV 54872 GM -2.786 GN 35.2 [ 0.088 s ] -442: MSE 3928.063 PDM 6.1055741 CMIN -4.21 CAVG -0.00 CMAX 3.26 -442: LSD 21.00 -442: [ 1, 4] SCORE 1404.270 NV 54872 GM 1.576 GN 10.3 [ 0.079 s ] -442: MSE 1228.705 PDM 5.8521819 CMIN -19.53 CAVG 0.01 CMAX 16.23 -442: LSD 76.08 -442: [ 2, 5] SCORE 1282.464 NV 54872 GM 13.580 GN 4.68 [ 0.079 s ] -442: MSE 1058.280 PDM 7.4727950 CMIN -25.04 CAVG 0.01 CMAX 19.49 -442: LSD 32.00 -442: [2] xf_out->m_type = 9, xf_in->m_type = 0 -442: ** Registration worker thread finished. -442: Warping... -442: Running: plm_warp_native -442: Converting input image... -442: Converting xform... -442: bspline_xform_initialize -442: rdims = (10,10,10) -442: vox_per_rgn = (4,4,4) -442: cdims = (13 13 13) -442: Creating output vf... -442: Creating output volume... -442: Running native warper... -442: bspline_warp complete. -442: Back convert to original type... -442: > Convert vf to itk -442: > Conversion complete. -442: plm_warp_native is complete. -442: Saving image... -442: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-img.nrrd -442: Saving vf... -442: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-vf.nrrd -442: Load: 0.102903 -442: Run: 0.551061 -442: Save: 0.269135 -442: Total: 0.923099 -442: Finished! -442: -442: STDERR: -442: Not an error -566/578 Test #442: plm-reg-point-dmap-a .................. Passed 1.23 sec 538: RETVAL: 0 538: STDOUT: Loading fixed... 538: Loading moving... @@ -23170,94 +23303,12 @@ 538: 538: STDERR: 538: Not an error -567/578 Test #538: plm-xf-convert-f ...................... Passed 0.54 sec -418: RETVAL: 0 -418: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha -418: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha -418: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha -418: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha -418: Launching registration worker thread -418: Inside registration worker thread -418: Doing registration stage -418: [1] xf_in->m_type = 0, xf_out->m_type = 0 -418: RESAMPLE 1 1: (1 1 1), (1 1 1) -418: RESAMPLE 1 1: (1 1 1), (1 1 1) -418: volume_calc_grad complete. -418: bspline_xform_initialize -418: Warning: vox_per_rgn was less than 4. -418: Warning: vox_per_rgn was less than 4. -418: Warning: vox_per_rgn was less than 4. -418: rdims = (10,10,10) -418: vox_per_rgn = (4,4,4) -418: cdims = (13 13 13) -418: Algorithm flavor = h -418: Threading = 0 -418: >> Checking JH allocation -418: >> Performing JH allocation -418: BSPLINE PARMS -418: max_its = 5 -418: max_feval = 5 -418: BSPLINE XFORM HEADER -418: vox_per_rgn = 4 4 4 -418: roi_offset = 0 0 0 -418: roi_dim = 38 38 38 -418: img_dc = 1 0 0 0 1 0 0 0 1 -418: BST METRICS -418: MET 110111 MI 1.000000 -418: >> Performing JH initialization -418: Setting nmax, mmax = 6591 83 -418: >>> START -418: This problem is unconstrained. -418: [ 0, 0] MI -0.0060547 NV 729 GM 0.008 GN 0.0011 [ 0.144 s ] -418: CMIN 0.01 CAVG 0.01 CMAX 0.01 -418: LSD 0.00 -418: [ 0, 1] MI -0.0496013 NV 569 GM -0.020 GN 0.00349 [ 0.144 s ] -418: CMIN -0.30 CAVG 0.01 CMAX 0.04 -418: LSD 1.00 -418: [ 1, 2] MI -0.0061482 NV 729 GM 0.000 GN 0.00024 [ 0.107 s ] -418: CMIN -0.30 CAVG 0.01 CMAX 0.05 -418: LSD 0.25 -418: [ 1, 3] MI -0.0496042 NV 569 GM -0.020 GN 0.00349 [ 0.208 s ] -418: CMIN -0.30 CAVG 0.01 CMAX 0.04 -418: LSD 0.00 -418: [ 1, 4] MI -0.0496071 NV 569 GM -0.020 GN 0.00349 [ 0.156 s ] -418: CMIN -0.30 CAVG 0.01 CMAX 0.04 -418: LSD 0.00 -418: [ 1, 5] MI -0.0020808 NV 629 GM -0.002 GN 0.000318 [ 0.184 s ] -418: CMIN -0.30 CAVG 0.01 CMAX 0.05 -418: LSD 0.12 -418: [2] xf_out->m_type = 9, xf_in->m_type = 0 -418: ** Registration worker thread finished. -418: Writing transformation ... -418: Warping... -418: Running: plm_warp_native -418: Converting input image... -418: Converting xform... -418: bspline_xform_initialize -418: rdims = (10,10,10) -418: vox_per_rgn = (4,4,4) -418: cdims = (13 13 13) -418: Creating output vf... -418: Creating output volume... -418: Running native warper... -418: bspline_warp complete. -418: Back convert to original type... -418: > Convert vf to itk -418: > Conversion complete. -418: plm_warp_native is complete. -418: Saving image... -418: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-img.mha -418: Saving vf... -418: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-vf.mha -418: Load: 0.050029 -418: Run: 0.956422 -418: Save: 0.0461569 -418: Total: 1.05261 -418: Finished! -418: -418: STDERR: -418: Not an error -568/578 Test #418: plm-reg-roi-a ......................... Passed 1.41 sec +566/578 Test #538: plm-xf-convert-f ...................... Passed 0.23 sec +567/578 Test #570: proton-dose-5d-check .................. Passed 0.03 sec +568/578 Test #573: proton-dose-6a-check .................. Passed 0.02 sec +575: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +575: PARMS is stats;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha +575: EXPECTED_ERRNO is 576: RETVAL: 0 576: STDOUT: Skin file defined. Modifying input ct... 576: FPD = 320.500029, BPD = 821.195355 @@ -23271,7 +23322,7 @@ 576: 576: STDERR: 576: Not an error -569/578 Test #576: wed-a ................................. Passed 2.76 sec +569/578 Test #576: wed-a ................................. Passed 1.84 sec test 577 Start 577: wed-b @@ -23284,115 +23335,12 @@ 578: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-c.txt" "-P" "/build/reproducible-path/plastimatch-1.10.0+dfsg.1/cmake/RUN_CTEST.cmake" 578: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 578: Test timeout computed to be: 1500 -575: RETVAL: 0 -575: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 216000 -575: -575: STDERR: -575: Not an error -570/578 Test #575: proton-dose-8d-stats .................. Passed 0.46 sec -577: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch -577: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b.txt -577: EXPECTED_ERRNO is 578: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch 578: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-c.txt 578: EXPECTED_ERRNO is -423: RETVAL: 0 -423: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha -423: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha -423: Loading fixed stiffness: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha -423: Launching registration worker thread -423: Inside registration worker thread -423: Doing registration stage -423: [1] xf_in->m_type = 0, xf_out->m_type = 0 -423: RESAMPLE 1 1: (2 2 2), (2 2 2) -423: RESAMPLE 1 1: (2 2 2), (2 2 2) -423: volume_calc_grad complete. -423: bspline_xform_initialize -423: Warning: vox_per_rgn was less than 4. -423: Warning: vox_per_rgn was less than 4. -423: Warning: vox_per_rgn was less than 4. -423: rdims = (5,5,5) -423: vox_per_rgn = (4,4,4) -423: cdims = (8 8 8) -423: RESAMPLE 1 1: (2 2 2), (2 2 2) -423: Algorithm flavor = g -423: Threading = 0 -423: Regularization: flavor = a lambda = 0.100000 -423: >> Checking JH allocation -423: BSPLINE PARMS -423: max_its = 5 -423: max_feval = 5 -423: BSPLINE XFORM HEADER -423: vox_per_rgn = 4 4 4 -423: roi_offset = 0 0 0 -423: roi_dim = 19 19 19 -423: img_dc = 1 0 0 0 1 0 0 0 1 -423: BST METRICS -423: MET 110100 MSE 1.000000 -423: Setting nmax, mmax = 1536 41 -423: >>> START -423: This problem is unconstrained. -423: [ 0, 0] SCORE 74227.273 NV 6859 GM 0.000 GN 188 [ 0.189 s ] -423: MSE 74227.273 RM 0.000 [ 0.094 | 0.095 ] -423: CMIN 0.00 CAVG 0.00 CMAX 0.00 -423: LSD 0.00 -423: [ 0, 1] SCORE 73948.398 NV 6859 GM 0.045 GN 187 [ 0.105 s ] -423: MSE 73948.391 RM 0.010 [ 0.036 | 0.069 ] -423: CMIN -0.14 CAVG -0.00 CMAX 0.15 -423: LSD 1.00 -423: [ 0, 2] SCORE 72846.922 NV 6859 GM 0.264 GN 183 [ 0.182 s ] -423: MSE 72846.680 RM 0.242 [ 0.046 | 0.136 ] -423: CMIN -0.69 CAVG -0.00 CMAX 0.76 -423: LSD 5.00 -423: [ 0, 3] SCORE 68660.922 NV 6859 GM 1.168 GN 166 [ 0.168 s ] -423: MSE 68656.656 RM 4.268 [ 0.035 | 0.132 ] -423: CMIN -2.91 CAVG -0.00 CMAX 3.18 -423: LSD 21.00 -423: [ 1, 4] SCORE 42095.320 NV 6859 GM -11.876 GN 58.8 [ 0.084 s ] -423: MSE 41780.070 RM 315.248 [ 0.043 | 0.041 ] -423: CMIN -25.44 CAVG -0.01 CMAX 25.37 -423: LSD 160.09 -423: [ 2, 5] SCORE 33075.488 NV 6859 GM 41.190 GN 77.9 [ 0.099 s ] -423: MSE 32300.393 RM 775.097 [ 0.040 | 0.059 ] -423: CMIN -39.12 CAVG 0.00 CMAX 38.06 -423: LSD 114.34 -423: [2] xf_out->m_type = 9, xf_in->m_type = 0 -423: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) -423: bspline_xform_initialize -423: rdims = (5,5,5) -423: vox_per_rgn = (8,8,8) -423: cdims = (8 8 8) -423: ** Registration worker thread finished. -423: Writing transformation ... -423: Warping... -423: Running: plm_warp_native -423: Converting input image... -423: Converting xform... -423: bspline_xform_initialize -423: rdims = (5,5,5) -423: vox_per_rgn = (8,8,8) -423: cdims = (8 8 8) -423: Creating output vf... -423: Creating output volume... -423: Running native warper... -423: bspline_warp complete. -423: Back convert to original type... -423: > Convert vf to itk -423: > Conversion complete. -423: plm_warp_native is complete. -423: Saving image... -423: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-img.mha -423: Saving vf... -423: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-vf.mha -423: Load: 0.164321 -423: Run: 0.871583 -423: Save: 0.05077 -423: Total: 1.08667 -423: Finished! -423: -423: STDERR: -423: Not an error -571/578 Test #423: plm-reg-stiffness-a ................... Passed 1.55 sec +577: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/plastimatch +577: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b.txt +577: EXPECTED_ERRNO is 421: RETVAL: 0 421: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 421: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha @@ -23426,48 +23374,48 @@ 421: Setting nmax, mmax = 864 31 421: >>> START 421: This problem is unconstrained. -421: [ 0, 0] SCORE 66568.047 NV 1690 GM 14792.900 GN 3.94e+03 [ 0.103 s ] -421: MSE 66568.047 RM 0.000 [ 0.040 | 0.062 ] +421: [ 0, 0] SCORE 66568.047 NV 1690 GM 14792.900 GN 3.94e+03 [ 0.111 s ] +421: MSE 66568.047 RM 0.000 [ 0.050 | 0.061 ] 421: CMIN 0.00 CAVG 0.00 CMAX 0.00 421: LSD 0.00 -421: [ 0, 1] SCORE 60779.625 NV 1690 GM 13427.228 GN 3.59e+03 [ 0.135 s ] -421: MSE 60779.609 RM 0.015 [ 0.063 | 0.071 ] +421: [ 0, 1] SCORE 60779.625 NV 1690 GM 13427.228 GN 3.59e+03 [ 0.120 s ] +421: MSE 60779.609 RM 0.015 [ 0.064 | 0.056 ] 421: CMIN -0.46 CAVG -0.00 CMAX 0.10 421: LSD 1.00 -421: [ 0, 2] SCORE 43202.340 NV 1690 GM 16992.866 GN 4.39e+03 [ 0.129 s ] -421: MSE 43201.965 RM 0.376 [ 0.045 | 0.084 ] +421: [ 0, 2] SCORE 43202.340 NV 1690 GM 16992.866 GN 4.39e+03 [ 0.104 s ] +421: MSE 43201.965 RM 0.376 [ 0.053 | 0.051 ] 421: CMIN -2.30 CAVG -0.02 CMAX 0.50 421: LSD 5.00 -421: [ 0, 3] SCORE 11325.080 NV 1619 GM -932.100 GN 1.45e+03 [ 0.176 s ] -421: MSE 11318.452 RM 6.628 [ 0.083 | 0.093 ] +421: [ 0, 3] SCORE 11325.080 NV 1619 GM -932.100 GN 1.45e+03 [ 0.116 s ] +421: MSE 11318.452 RM 6.628 [ 0.044 | 0.072 ] 421: CMIN -9.66 CAVG -0.09 CMAX 2.11 421: LSD 21.00 -421: [ 1, 4] SCORE 5165.491 NV 1647 GM 1195.560 GN 605 [ 0.124 s ] -421: MSE 5160.030 RM 5.461 [ 0.068 | 0.057 ] +421: [ 1, 4] SCORE 5165.491 NV 1647 GM 1195.560 GN 605 [ 0.096 s ] +421: MSE 5160.030 RM 5.461 [ 0.027 | 0.068 ] 421: CMIN -7.99 CAVG -0.09 CMAX 1.46 421: LSD 4.95 -421: [ 2, 5] SCORE 5370.420 NV 1649 GM -3582.381 GN 910 [ 0.139 s ] -421: MSE 5363.509 RM 6.911 [ 0.060 | 0.079 ] +421: [ 2, 5] SCORE 5370.420 NV 1649 GM -3582.381 GN 910 [ 0.101 s ] +421: MSE 5363.509 RM 6.911 [ 0.076 | 0.025 ] 421: CMIN -8.90 CAVG -0.10 CMAX 1.42 421: LSD 5.04 -421: [ 2, 6] SCORE 4305.869 NV 1649 GM -1305.969 GN 395 [ 0.132 s ] -421: MSE 4299.880 RM 5.989 [ 0.080 | 0.052 ] +421: [ 2, 6] SCORE 4305.869 NV 1649 GM -1305.969 GN 395 [ 0.115 s ] +421: MSE 4299.880 RM 5.989 [ 0.067 | 0.048 ] 421: CMIN -7.75 CAVG -0.10 CMAX 1.44 421: LSD 2.37 -421: [ 3, 7] SCORE 4280.987 NV 1653 GM 1734.354 GN 474 [ 0.096 s ] -421: MSE 4275.453 RM 5.534 [ 0.040 | 0.056 ] +421: [ 3, 7] SCORE 4280.987 NV 1653 GM 1734.354 GN 474 [ 0.060 s ] +421: MSE 4275.453 RM 5.534 [ 0.040 | 0.021 ] 421: CMIN -7.64 CAVG -0.09 CMAX 1.40 421: LSD 1.62 -421: [ 4, 8] SCORE 4194.305 NV 1651 GM 205.505 GN 129 [ 0.108 s ] -421: MSE 4188.512 RM 5.794 [ 0.083 | 0.025 ] +421: [ 4, 8] SCORE 4194.305 NV 1651 GM 205.505 GN 129 [ 0.060 s ] +421: MSE 4188.512 RM 5.794 [ 0.035 | 0.024 ] 421: CMIN -7.74 CAVG -0.10 CMAX 1.43 421: LSD 0.60 -421: [ 5, 9] SCORE 4196.242 NV 1645 GM 115.154 GN 112 [ 0.091 s ] -421: MSE 4190.442 RM 5.800 [ 0.035 | 0.057 ] +421: [ 5, 9] SCORE 4196.242 NV 1645 GM 115.154 GN 112 [ 0.043 s ] +421: MSE 4190.442 RM 5.800 [ 0.019 | 0.024 ] 421: CMIN -7.66 CAVG -0.10 CMAX 1.43 421: LSD 0.26 -421: [ 5, 10] SCORE 4195.648 NV 1649 GM 201.989 GN 124 [ 0.116 s ] -421: MSE 4189.854 RM 5.795 [ 0.048 | 0.068 ] +421: [ 5, 10] SCORE 4195.648 NV 1649 GM 201.989 GN 124 [ 0.068 s ] +421: MSE 4189.854 RM 5.795 [ 0.030 | 0.038 ] 421: CMIN -7.72 CAVG -0.10 CMAX 1.43 421: LSD 0.06 421: [2] xf_out->m_type = 9, xf_in->m_type = 0 @@ -23498,15 +23446,103 @@ 421: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d-img.mha 421: Saving vf... 421: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d-vf.mha -421: Load: 0.0499899 -421: Run: 1.38189 -421: Save: 0.0267889 -421: Total: 1.45867 +421: Load: 0.0473919 +421: Run: 1.02378 +421: Save: 0.0178671 +421: Total: 1.08904 421: Finished! 421: 421: STDERR: 421: Not an error -572/578 Test #421: plm-reg-roi-d ......................... Passed 1.71 sec +570/578 Test #421: plm-reg-roi-d ......................... Passed 1.25 sec +575: RETVAL: 0 +575: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 216000 +575: +575: STDERR: +575: Not an error +571/578 Test #575: proton-dose-8d-stats .................. Passed 0.22 sec +539: RETVAL: 0 +539: STDOUT: Loading fixed... +539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT +539: Found DCM_ReferencedFrameOfReferenceSequence! +539: Found DCM_RTReferencedStudySequence! +539: Trying to load rt dose. +539: Load: DoseGridScaling = 0.000000 +539: RTDOSE: dim = 38 38 38 +539: ipp = -243.421005 -243.421005 -243.421005 +539: spc = 13.157900 13.157900 13.157900 +539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +539: Bits_alloc: 32 +539: Bits_stored: 32 +539: High_bit: 31 +539: Pixel_rep: 0 +539: rc = 1, length = 109744, npix = 54872 +539: Trying to load rt structure set. +539: Adding structure (1), Foreground +539: Structure 1 has color 255\0\0 +539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957657RTDOSE +539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386063.1757170007.957658RTSTRUCT +539: Found DCM_ReferencedFrameOfReferenceSequence! +539: Found DCM_RTReferencedStudySequence! +539: Trying to load rt dose. +539: Load: DoseGridScaling = 0.000000 +539: RTDOSE: dim = 38 38 38 +539: ipp = -243.421005 -243.421005 -243.421005 +539: spc = 13.157900 13.157900 13.157900 +539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +539: Bits_alloc: 32 +539: Bits_stored: 32 +539: High_bit: 31 +539: Pixel_rep: 0 +539: rc = 1, length = 109744, npix = 54872 +539: Trying to load rt structure set. +539: Adding structure (1), Foreground +539: Structure 1 has color 255\0\0 +539: Loading moving... +539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925889RTDOSE +539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925890RTSTRUCT +539: Found DCM_ReferencedFrameOfReferenceSequence! +539: Found DCM_RTReferencedStudySequence! +539: Trying to load rt dose. +539: Load: DoseGridScaling = 0.000000 +539: RTDOSE: dim = 38 38 38 +539: ipp = -243.421005 -243.421005 -243.421005 +539: spc = 13.157900 13.157900 13.157900 +539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +539: Bits_alloc: 32 +539: Bits_stored: 32 +539: High_bit: 31 +539: Pixel_rep: 0 +539: rc = 1, length = 109744, npix = 54872 +539: Trying to load rt structure set. +539: Adding structure (1), Foreground +539: Structure 1 has color 255\0\0 +539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925889RTDOSE +539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.386062.1757170007.925890RTSTRUCT +539: Found DCM_ReferencedFrameOfReferenceSequence! +539: Found DCM_RTReferencedStudySequence! +539: Trying to load rt dose. +539: Load: DoseGridScaling = 0.000000 +539: RTDOSE: dim = 38 38 38 +539: ipp = -243.421005 -243.421005 -243.421005 +539: spc = 13.157900 13.157900 13.157900 +539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +539: Bits_alloc: 32 +539: Bits_stored: 32 +539: High_bit: 31 +539: Pixel_rep: 0 +539: rc = 1, length = 109744, npix = 54872 +539: Trying to load rt structure set. +539: Adding structure (1), Foreground +539: Structure 1 has color 255\0\0 +539: Saving sro +539: Trying to save SRO: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g/dro.dcm +539: Done saving sro +539: +539: STDERR: +539: Not an error +572/578 Test #539: plm-xf-convert-g ...................... Passed 0.42 sec 422: RETVAL: 0 422: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 422: Loading moving image [0]: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha @@ -23536,18 +23572,18 @@ 422: MSE [ 0, 0, 1.00] 20000.000 [-0.9999999727511648, 0.00023344735891123153, 0] 422: :: [0, 0, 0] 422: * -422: MSE [ 1, 1, 1.00] 16666.407 [-1.9999999583532027, 0.00006375373999509384, 1.1202595030447236e-16] -3333.59 +422: MSE [ 1, 1, 1.00] 16666.407 [-1.9999999583532024, 0.00006375373999518557, 0] -3333.59 422: :: [-0.9999999727511648, 0.00023344735891123153, 0] 422: * -422: MSE [ 2, 2, 1.00] 21428.450 [-2.9999999539450632, 0.00015764878267367493, 2.0307319352400874e-16] 4762.04 -422: MSE [ 3, 3, 0.50] 17856.955 [-2.4999999789370184, -4.396560047260185e-7, 2.1465554038671977e-16] -3571.49 -422: MSE [ 4, 4, 0.50] 18749.999 [-1.9999999790242364, -0.000009778710908865035, 2.388665339710065e-16] 893.04 -422: MSE [ 5, 5, 0.25] 21428.553 [-2.2499999446638332, 0.00012129455271895143, 2.2260809930520186e-16] 2678.55 -422: MSE [ 6, 6, 0.12] 19865.879 [-2.1250000509246827, -0.00004169379354040909, 2.53121299693331e-16] -1562.67 -422: MSE [ 7, 7, 0.06] 20591.445 [-2.1874999423992314, 0.00007477796101170825, 2.0904029210605143e-16] 725.57 -422: MSE [ 8, 8, 0.03] 20214.720 [-2.156250369087226, -0.00008852487918328234, 9.970167076056483e-17] -376.73 -422: MSE [ 9, 9, 0.02] 20399.540 [-2.171875105091347, 0.0000023035388794752305, 1.0471493929840602e-16] 184.82 -422: EndEvent: [-2.171875105091347, 0.0000023035388794752305, 1.0471493929840602e-16] +422: MSE [ 2, 2, 1.00] 21428.450 [-2.999999953945063, 0.00015764878267373982, 3.1216197675269354e-16] 4762.04 +422: MSE [ 3, 3, 0.50] 17856.955 [-2.499999978937018, -4.396560046627553e-7, 3.382222571937934e-16] -3571.49 +422: MSE [ 4, 4, 0.50] 18749.999 [-1.999999979024236, -0.000009778710908762702, 3.531213301687392e-16] 893.04 +422: MSE [ 5, 5, 0.25] 21428.553 [-2.249999944663833, 0.00012129455271903311, 3.921415733666699e-16] 2678.55 +422: MSE [ 6, 6, 0.12] 19865.879 [-2.1250000509246822, -0.00004169379354035229, 3.921415733666699e-16] -1562.67 +422: MSE [ 7, 7, 0.06] 20591.445 [-2.187499942399231, 0.00007477796101124929, 3.8176957158142765e-16] 725.57 +422: MSE [ 8, 8, 0.03] 20214.720 [-2.1562503690872257, -0.0000885248791837285, 3.8176957158142765e-16] -376.73 +422: MSE [ 9, 9, 0.02] 20399.540 [-2.1718751050913467, 0.0000023035388790271298, 3.703106720663627e-16] 184.82 +422: EndEvent: [-2.1718751050913467, 0.0000023035388790271298, 3.703106720663627e-16] 422: RegularStepGradientDescentOptimizer: Maximum number of iterations (10) exceeded. 422: ITK registration complete 422: [2] xf_out->m_type = 1, xf_in->m_type = 0 @@ -23578,28 +23614,28 @@ 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. -422: [ 0, 0] SCORE 17856.865 NV 5250 GM 596.305 GN 997 [ 0.140 s ] -422: MSE 17856.865 RM 0.000 [ 0.080 | 0.060 ] +422: [ 0, 0] SCORE 17856.865 NV 5250 GM 596.305 GN 997 [ 0.113 s ] +422: MSE 17856.865 RM 0.000 [ 0.068 | 0.045 ] 422: CMIN -1.00 CAVG -0.33 CMAX 0.00 422: LSD 0.00 -422: [ 0, 1] SCORE 15761.621 NV 5415 GM 4002.270 GN 1.58e+03 [ 0.176 s ] -422: MSE 15761.603 RM 0.019 [ 0.068 | 0.108 ] +422: [ 0, 1] SCORE 15761.621 NV 5415 GM 4002.270 GN 1.58e+03 [ 0.099 s ] +422: MSE 15761.603 RM 0.019 [ 0.051 | 0.048 ] 422: CMIN -1.35 CAVG -0.33 CMAX 0.11 422: LSD 1.00 -422: [ 0, 2] SCORE 11419.833 NV 5415 GM 3904.956 GN 1.2e+03 [ 0.148 s ] -422: MSE 11419.360 RM 0.473 [ 0.053 | 0.095 ] +422: [ 0, 2] SCORE 11419.833 NV 5415 GM 3904.956 GN 1.2e+03 [ 0.108 s ] +422: MSE 11419.360 RM 0.473 [ 0.060 | 0.048 ] 422: CMIN -2.76 CAVG -0.34 CMAX 0.57 422: LSD 5.00 -422: [ 0, 3] SCORE 11865.492 NV 5349 GM 4432.436 GN 1.31e+03 [ 0.179 s ] -422: MSE 11857.157 RM 8.335 [ 0.107 | 0.072 ] +422: [ 0, 3] SCORE 11865.492 NV 5349 GM 4432.436 GN 1.31e+03 [ 0.112 s ] +422: MSE 11857.157 RM 8.335 [ 0.064 | 0.048 ] 422: CMIN -8.39 CAVG -0.35 CMAX 4.37 422: LSD 21.00 -422: [ 1, 4] SCORE 2624.840 NV 5330 GM 1520.288 GN 405 [ 0.188 s ] -422: MSE 2620.351 RM 4.489 [ 0.076 | 0.112 ] +422: [ 1, 4] SCORE 2624.840 NV 5330 GM 1520.288 GN 405 [ 0.084 s ] +422: MSE 2620.351 RM 4.489 [ 0.056 | 0.028 ] 422: CMIN -7.51 CAVG -0.37 CMAX 1.81 422: LSD 7.90 -422: [ 2, 5] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.128 s ] -422: MSE 2064.967 RM 5.786 [ 0.084 | 0.044 ] +422: [ 2, 5] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.112 s ] +422: MSE 2064.967 RM 5.786 [ 0.056 | 0.056 ] 422: CMIN -8.62 CAVG -0.39 CMAX 1.40 422: LSD 4.35 422: [2] xf_out->m_type = 9, xf_in->m_type = 1 @@ -23630,28 +23666,28 @@ 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. -422: [ 0, 0] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.109 s ] -422: MSE 2064.967 RM 5.786 [ 0.061 | 0.048 ] +422: [ 0, 0] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.079 s ] +422: MSE 2064.967 RM 5.786 [ 0.055 | 0.024 ] 422: CMIN -8.62 CAVG -0.39 CMAX 1.40 422: LSD 0.00 -422: [ 0, 1] SCORE 1741.366 NV 5318 GM -709.336 GN 291 [ 0.096 s ] -422: MSE 1736.001 RM 5.365 [ 0.048 | 0.048 ] +422: [ 0, 1] SCORE 1741.366 NV 5318 GM -709.336 GN 291 [ 0.067 s ] +422: MSE 1736.001 RM 5.365 [ 0.027 | 0.041 ] 422: CMIN -8.13 CAVG -0.39 CMAX 1.38 422: LSD 1.00 -422: [ 1, 2] SCORE 1448.726 NV 5351 GM 553.138 GN 184 [ 0.080 s ] -422: MSE 1444.063 RM 4.664 [ 0.040 | 0.040 ] +422: [ 1, 2] SCORE 1448.726 NV 5351 GM 553.138 GN 184 [ 0.056 s ] +422: MSE 1444.063 RM 4.664 [ 0.037 | 0.019 ] 422: CMIN -7.05 CAVG -0.38 CMAX 1.33 422: LSD 2.47 -422: [ 2, 3] SCORE 1411.069 NV 5344 GM 258.307 GN 92.3 [ 0.104 s ] -422: MSE 1406.122 RM 4.946 [ 0.064 | 0.040 ] +422: [ 2, 3] SCORE 1411.069 NV 5344 GM 258.307 GN 92.3 [ 0.058 s ] +422: MSE 1406.122 RM 4.946 [ 0.033 | 0.025 ] 422: CMIN -7.20 CAVG -0.39 CMAX 1.33 422: LSD 0.62 -422: [ 3, 4] SCORE 1391.029 NV 5340 GM -132.885 GN 63.2 [ 0.052 s ] -422: MSE 1385.782 RM 5.247 [ 0.020 | 0.032 ] +422: [ 3, 4] SCORE 1391.029 NV 5340 GM -132.885 GN 63.2 [ 0.048 s ] +422: MSE 1385.782 RM 5.247 [ 0.028 | 0.020 ] 422: CMIN -7.41 CAVG -0.39 CMAX 1.30 422: LSD 0.81 -422: [ 4, 5] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.064 s ] -422: MSE 1375.316 RM 5.240 [ 0.032 | 0.032 ] +422: [ 4, 5] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.052 s ] +422: MSE 1375.316 RM 5.240 [ 0.028 | 0.023 ] 422: CMIN -7.42 CAVG -0.39 CMAX 1.30 422: LSD 0.36 422: [2] xf_out->m_type = 9, xf_in->m_type = 9 @@ -23682,28 +23718,28 @@ 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. -422: [ 0, 0] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.051 s ] -422: MSE 1375.316 RM 5.240 [ 0.026 | 0.024 ] +422: [ 0, 0] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.050 s ] +422: MSE 1375.316 RM 5.240 [ 0.030 | 0.020 ] 422: CMIN -7.42 CAVG -0.39 CMAX 1.30 422: LSD 0.00 -422: [ 0, 1] SCORE 1360.810 NV 5336 GM 259.462 GN 115 [ 0.067 s ] -422: MSE 1355.755 RM 5.056 [ 0.035 | 0.032 ] +422: [ 0, 1] SCORE 1360.810 NV 5336 GM 259.462 GN 115 [ 0.037 s ] +422: MSE 1355.755 RM 5.056 [ 0.016 | 0.021 ] 422: CMIN -7.23 CAVG -0.39 CMAX 1.32 422: LSD 1.00 -422: [ 0, 2] SCORE 1363.081 NV 5336 GM 215.275 GN 64.4 [ 0.060 s ] -422: MSE 1357.933 RM 5.148 [ 0.040 | 0.020 ] +422: [ 0, 2] SCORE 1363.081 NV 5336 GM 215.275 GN 64.4 [ 0.022 s ] +422: MSE 1357.933 RM 5.148 [ 0.011 | 0.011 ] 422: CMIN -7.33 CAVG -0.39 CMAX 1.31 422: LSD 0.47 -422: [ 1, 3] SCORE 1355.968 NV 5336 GM 93.286 GN 47.5 [ 0.044 s ] -422: MSE 1350.760 RM 5.209 [ 0.024 | 0.020 ] +422: [ 1, 3] SCORE 1355.968 NV 5336 GM 93.286 GN 47.5 [ 0.021 s ] +422: MSE 1350.760 RM 5.209 [ 0.007 | 0.013 ] 422: CMIN -7.36 CAVG -0.39 CMAX 1.31 422: LSD 0.24 -422: [ 2, 4] SCORE 1327.456 NV 5313 GM -133.711 GN 39.2 [ 0.048 s ] -422: MSE 1321.881 RM 5.575 [ 0.024 | 0.024 ] +422: [ 2, 4] SCORE 1327.456 NV 5313 GM -133.711 GN 39.2 [ 0.020 s ] +422: MSE 1321.881 RM 5.575 [ 0.013 | 0.008 ] 422: CMIN -7.53 CAVG -0.39 CMAX 1.33 422: LSD 1.49 -422: [ 3, 5] SCORE 1315.612 NV 5295 GM -129.321 GN 46.1 [ 0.048 s ] -422: MSE 1309.647 RM 5.965 [ 0.024 | 0.024 ] +422: [ 3, 5] SCORE 1315.612 NV 5295 GM -129.321 GN 46.1 [ 0.023 s ] +422: MSE 1309.647 RM 5.965 [ 0.015 | 0.008 ] 422: CMIN -7.65 CAVG -0.40 CMAX 1.39 422: LSD 1.60 422: [2] xf_out->m_type = 9, xf_in->m_type = 9 @@ -23734,15 +23770,15 @@ 422: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e-img.mha 422: Saving vf... 422: Trying to write image to /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e-vf.mha -422: Load: 0.111922 -422: Run: 1.83664 -422: Save: 0.0627611 -422: Total: 2.01132 +422: Load: 0.0292919 +422: Run: 1.20446 +422: Save: 0.0114479 +422: Total: 1.2452 422: Finished! 422: 422: STDERR: 422: Not an error -573/578 Test #422: plm-reg-roi-e ......................... Passed 2.36 sec +573/578 Test #422: plm-reg-roi-e ......................... Passed 1.38 sec 578: RETVAL: 0 578: STDOUT: Loading rpl 578: -> /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha @@ -23756,7 +23792,7 @@ 578: 578: STDERR: 578: Not an error -574/578 Test #578: wed-c ................................. Passed 0.87 sec +574/578 Test #578: wed-c ................................. Passed 0.52 sec 577: RETVAL: 0 577: STDOUT: Loading rpl 577: -> /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.rpl @@ -23775,7 +23811,7 @@ 577: 577: STDERR: 577: Not an error -575/578 Test #577: wed-b ................................. Passed 1.21 sec +575/578 Test #577: wed-b ................................. Passed 0.93 sec 471: RETVAL: 0 471: STDOUT: Contrast threshold = 0.030000 471: Curvature threshold = 172.302505 @@ -23992,7 +24028,7 @@ 471: 471: STDERR: 471: Not an error -576/578 Test #471: plm-sift-a ............................ Passed 5.81 sec +576/578 Test #471: plm-sift-a ............................ Passed 3.50 sec test 472 Start 472: plm-sift-a-check-1 @@ -24006,7 +24042,6 @@ 473: Working Directory: /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing 473: Test timeout computed to be: 1500 472: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv -473: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv 472: -- REGEX is ^p1-1,(.*) 472: -- MATCH_STRING is -7.500,7.500,-17.500 472: -- PARSED VALUE=|p1-1,-7.500,7.500,-17.500| @@ -24014,7 +24049,8 @@ 472: -- LENGTH=20 472: -- |-7.500,7.500,-17.500|-7.500,7.500,-17.500| 472: Not an error -577/578 Test #472: plm-sift-a-check-1 .................... Passed 0.03 sec +577/578 Test #472: plm-sift-a-check-1 .................... Passed 0.01 sec +473: -- INFILE is /build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv 473: -- REGEX is ^p1-1,(.*) 473: -- MATCH_STRING is -7.500,7.500,-22.500 473: -- PARSED VALUE=|p1-1,-7.500,7.500,-22.500| @@ -24022,11 +24058,11 @@ 473: -- LENGTH=20 473: -- |-7.500,7.500,-22.500|-7.500,7.500,-22.500| 473: Not an error -578/578 Test #473: plm-sift-a-check-2 .................... Passed 0.03 sec +578/578 Test #473: plm-sift-a-check-2 .................... Passed 0.01 sec 100% tests passed, 0 tests failed out of 578 -Total Test time (real) = 16.35 sec +Total Test time (real) = 11.40 sec make[2]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1' create-stamp debian/debhelper-build-stamp @@ -24034,7 +24070,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1' dh_auto_install - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/reproducible-path/plastimatch-1.10.0\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/plastimatch-1.10.0\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/plastimatch-1.10.0+dfsg.1 -B/build/reproducible-path/plastimatch-1.10.0+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -24261,194 +24297,194 @@ removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/libplmclp.a' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a' rm -rfv /build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch' removed directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/lib/cmake' rm -rfv /build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h' -removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' +removed '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h' removed directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include/plastimatch' removed directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1/debian/plastimatch/usr/include' make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.10.0+dfsg.1' @@ -24473,8 +24509,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.10.0+dfsg.1-1_amd64.deb'. dpkg-deb: building package 'plastimatch' in '../plastimatch_1.10.0+dfsg.1-1_amd64.deb'. +dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.10.0+dfsg.1-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../plastimatch_1.10.0+dfsg.1-1_amd64.buildinfo dpkg-genchanges --build=binary -O../plastimatch_1.10.0+dfsg.1-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -24482,12 +24518,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/282948/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3849 and its subdirectories -I: Current time: Fri Oct 9 08:58:55 -12 2026 -I: pbuilder-time-stamp: 1791579535 +I: removing directory /srv/workspace/pbuilder/282948 and its subdirectories +I: Current time: Sun Sep 7 04:47:51 +14 2025 +I: pbuilder-time-stamp: 1757170071