Diff of the two buildlogs: -- --- b1/build.log 2025-08-28 01:17:20.012281096 +0000 +++ b2/build.log 2025-08-28 01:22:31.312657130 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Sep 29 19:38:15 -12 2026 -I: pbuilder-time-stamp: 1790753895 +I: Current time: Thu Aug 28 15:17:21 +14 2025 +I: pbuilder-time-stamp: 1756343841 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying use-archive-xopen.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4138439/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 28 01:17 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='10ae5c666dff46deabfd96c714e48641' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4138439' - PS1='# ' - PS2='> ' + INVOCATION_ID=a1861c04f2f24e3498e3e95cd87cc56e + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3934534 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H1P79vOt/pbuilderrc_8TTO --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H1P79vOt/b1 --logfile b1/build.log vcfanno_0.3.5+ds-2.dsc' - SUDO_GID='111' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H1P79vOt/pbuilderrc_h4Yo --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H1P79vOt/b2 --logfile b2/build.log vcfanno_0.3.5+ds-2.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/4138439/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -232,7 +264,7 @@ Get: 98 http://deb.debian.org/debian forky/main amd64 libncurses6 amd64 6.5+20250216-2 [105 kB] Get: 99 http://deb.debian.org/debian forky/main amd64 samtools amd64 1.21-1 [667 kB] Get: 100 http://deb.debian.org/debian forky/main amd64 tabix amd64 1.21+ds-1 [496 kB] -Fetched 117 MB in 1s (83.5 MB/s) +Fetched 117 MB in 3s (34.4 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19855 files and directories currently installed.) @@ -647,7 +679,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes dpkg-buildpackage: info: source package vcfanno dpkg-buildpackage: info: source version 0.3.5+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -670,85 +706,85 @@ dh_autoreconf -O--buildsystem=golang dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go install -trimpath -v -p 42 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared + cd obj-x86_64-linux-gnu && go install -trimpath -v -p 40 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared +internal/profilerecord +internal/asan +unicode github.com/dsnet/compress/internal +internal/nettrace +internal/unsafeheader container/list +vendor/golang.org/x/crypto/internal/alias crypto/internal/fips140/alias unicode/utf16 -internal/itoa -vendor/golang.org/x/crypto/internal/alias +internal/goarch +internal/coverage/rtcov math/bits +cmp +internal/goos +internal/godebugs +unicode/utf8 github.com/ulikunitz/xz/internal/hash +github.com/dsnet/compress/bzip2/internal/sais +github.com/klauspost/compress/internal/le vendor/golang.org/x/crypto/cryptobyte/asn1 -internal/coverage/rtcov -unicode -internal/goos -internal/asan internal/runtime/syscall -cmp +github.com/klauspost/compress/internal/cpuinfo crypto/internal/boring/sig -github.com/klauspost/compress/internal/le -internal/profilerecord +sync/atomic +internal/goexperiment encoding -internal/nettrace -internal/godebugs -internal/goarch +internal/runtime/atomic +log/internal internal/cpu -internal/unsafeheader -github.com/klauspost/compress/internal/cpuinfo -sync/atomic internal/byteorder -internal/msan -unicode/utf8 -github.com/dsnet/compress/bzip2/internal/sais -log/internal -internal/runtime/atomic -internal/goexperiment -crypto/internal/fips140/subtle +internal/itoa internal/runtime/math -internal/runtime/sys +crypto/internal/fips140/subtle +internal/msan internal/abi -crypto/internal/fips140deps/byteorder +internal/runtime/sys internal/chacha8rand -crypto/internal/fips140deps/cpu +crypto/internal/fips140deps/byteorder internal/bytealg +crypto/internal/fips140deps/cpu math internal/runtime/exithook internal/stringslite internal/race -github.com/klauspost/compress internal/sync internal/runtime/maps +github.com/klauspost/compress runtime iter -weak -crypto/subtle internal/reflectlite sync -maps +crypto/subtle +weak slices +maps errors sort -internal/singleflight -internal/bisect -internal/testlog -unique -runtime/cgo internal/oserror path -io -math/rand/v2 vendor/golang.org/x/net/dns/dnsmessage strconv -internal/godebug +math/rand/v2 +internal/bisect +io +internal/testlog syscall -crypto/internal/randutil -hash +internal/singleflight +unique +runtime/cgo +internal/godebug container/heap strings +hash bytes -hash/crc64 +crypto/internal/randutil hash/crc32 +hash/crc64 crypto net/netip reflect @@ -756,134 +792,134 @@ math/rand vendor/golang.org/x/text/transform github.com/brentp/irelate/interfaces +bufio github.com/dsnet/compress/internal/errors crypto/internal/impl -bufio -crypto/internal/fips140 net/http/internal/ascii regexp/syntax -crypto/tls/internal/fips140tls -crypto/internal/fips140/sha512 +crypto/internal/fips140 crypto/internal/fips140/sha256 crypto/internal/fips140/sha3 +crypto/internal/fips140/sha512 +crypto/tls/internal/fips140tls github.com/dsnet/compress crypto/internal/fips140/hmac crypto/sha3 -crypto/internal/fips140/check internal/syscall/execenv -crypto/internal/fips140hash internal/syscall/unix time -crypto/internal/fips140/hkdf -crypto/internal/fips140/tls12 -crypto/internal/fips140/edwards25519/field -crypto/internal/fips140/bigmod +crypto/internal/fips140/check +crypto/internal/fips140hash crypto/internal/fips140/nistec/fiat +crypto/internal/fips140/edwards25519/field crypto/internal/fips140/aes +crypto/internal/fips140/bigmod +crypto/internal/fips140/hkdf +crypto/internal/fips140/tls12 +regexp crypto/internal/fips140/tls13 crypto/internal/fips140/edwards25519 -regexp -github.com/BurntSushi/toml/internal -context io/fs +github.com/BurntSushi/toml/internal internal/poll -crypto/internal/fips140/nistec +context internal/filepathlite +crypto/internal/fips140/nistec +os internal/fmtsort encoding/binary -os -encoding/base64 -github.com/cespare/xxhash -vendor/golang.org/x/crypto/internal/poly1305 -github.com/klauspost/compress/internal/snapref -encoding/pem io/ioutil crypto/internal/sysrand path/filepath fmt -vendor/golang.org/x/sys/cpu net +vendor/golang.org/x/sys/cpu crypto/internal/entropy +encoding/base64 +github.com/klauspost/compress/internal/snapref +github.com/cespare/xxhash +vendor/golang.org/x/crypto/internal/poly1305 crypto/internal/fips140/drbg +encoding/pem +os/exec +crypto/internal/fips140/aes/gcm crypto/internal/fips140only crypto/internal/fips140/ecdh crypto/internal/fips140/ed25519 -crypto/internal/fips140/rsa crypto/internal/fips140/ecdsa -crypto/internal/fips140/aes/gcm crypto/internal/fips140/mlkem -os/exec -crypto/rc4 +crypto/internal/fips140/rsa crypto/md5 +crypto/rc4 +crypto/cipher +crypto/internal/boring +crypto/des +vendor/golang.org/x/crypto/chacha20 +crypto/aes +crypto/ecdh +crypto/sha512 +crypto/hmac +crypto/sha1 +crypto/sha256 flag +compress/flate +encoding/json +encoding/hex +net/url +log encoding/csv +github.com/pkg/errors +github.com/yuin/gopher-lua/ast +github.com/yuin/gopher-lua/pm +github.com/dsnet/compress/internal/prefix +github.com/klauspost/compress/fse +runtime/debug github.com/ulikunitz/xz/internal/xlog -mime/quotedprintable net/http/internal -encoding/hex -runtime/debug -github.com/klauspost/compress/fse -log -net/url +mime/quotedprintable +vendor/golang.org/x/net/http2/hpack mime -github.com/yuin/gopher-lua/pm -compress/flate -encoding/json os/user -github.com/yuin/gopher-lua/ast -vendor/golang.org/x/net/http2/hpack -github.com/pkg/errors -github.com/dsnet/compress/internal/prefix -math/big vendor/golang.org/x/text/unicode/norm -crypto/cipher +math/big +vendor/golang.org/x/crypto/chacha20poly1305 github.com/yuin/gopher-lua/parse -github.com/ulikunitz/xz/lzma -vendor/golang.org/x/crypto/chacha20 -crypto/des -crypto/internal/boring -vendor/golang.org/x/text/unicode/bidi github.com/brentp/vcfgo -crypto/sha256 -crypto/aes -crypto/ecdh -crypto/sha512 -crypto/hmac -crypto/sha1 -vendor/golang.org/x/crypto/chacha20poly1305 +vendor/golang.org/x/text/unicode/bidi +github.com/ulikunitz/xz/lzma github.com/klauspost/compress/huff0 -compress/gzip +github.com/dsnet/compress/bzip2 github.com/klauspost/compress/flate +compress/gzip +github.com/biogo/hts/bgzf vendor/golang.org/x/text/secure/bidirule github.com/yuin/gopher-lua -github.com/dsnet/compress/bzip2 github.com/ulikunitz/xz +github.com/biogo/hts/bgzf/index vendor/golang.org/x/net/idna -github.com/biogo/hts/bgzf +github.com/biogo/hts/internal +github.com/biogo/hts/csi github.com/BurntSushi/toml -crypto/internal/boring/bbig +github.com/biogo/hts/tabix +github.com/biogo/hts/sam +crypto/rand crypto/elliptic +crypto/internal/boring/bbig crypto/dsa encoding/asn1 -crypto/rand -github.com/biogo/hts/bgzf/index crypto/ed25519 crypto/internal/hpke crypto/rsa -github.com/biogo/hts/csi -github.com/biogo/hts/internal github.com/klauspost/compress/zstd -github.com/biogo/hts/tabix -github.com/biogo/hts/sam -crypto/x509/pkix -vendor/golang.org/x/crypto/cryptobyte github.com/klauspost/pgzip -crypto/ecdsa github.com/biogo/hts/bam github.com/brentp/irelate/parsers +vendor/golang.org/x/crypto/cryptobyte +crypto/x509/pkix github.com/brentp/bix -github.com/yuin/gluare +crypto/ecdsa github.com/brentp/irelate +github.com/yuin/gluare github.com/brentp/goluaez github.com/brentp/vcfanno/api vendor/golang.org/x/net/http/httpproxy @@ -898,13 +934,13 @@ github.com/brentp/vcfanno/shared github.com/brentp/vcfanno dh_auto_test -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go test -vet=off -v -p 42 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared + cd obj-x86_64-linux-gnu && go test -vet=off -v -p 40 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared testing: warning: no tests to run PASS -ok github.com/brentp/vcfanno 0.006s [no tests to run] +ok github.com/brentp/vcfanno 0.085s [no tests to run] === RUN Test OK: 13 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.03s) === RUN TestHandleA --- PASS: TestHandleA (0.00s) === RUN TestHandlAMulti @@ -912,7 +948,7 @@ === RUN TestByAlt --- PASS: TestByAlt (0.00s) PASS -ok github.com/brentp/vcfanno/api 0.017s +ok github.com/brentp/vcfanno/api 0.093s ? github.com/brentp/vcfanno/shared [no test files] create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang @@ -1030,9 +1066,9 @@ dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined dh_md5sums -O--buildsystem=golang dh_builddeb -O--buildsystem=golang +dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.5+ds-2_all.deb'. dpkg-deb: building package 'vcfanno-dbgsym' in '../vcfanno-dbgsym_0.3.5+ds-2_amd64.deb'. dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-2_amd64.deb'. -dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.5+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../vcfanno_0.3.5+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../vcfanno_0.3.5+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1040,12 +1076,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3934534/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4138439 and its subdirectories -I: Current time: Tue Sep 29 19:40:19 -12 2026 -I: pbuilder-time-stamp: 1790754019 +I: removing directory /srv/workspace/pbuilder/3934534 and its subdirectories +I: Current time: Thu Aug 28 15:22:30 +14 2025 +I: pbuilder-time-stamp: 1756344150