Diff of the two buildlogs: -- --- b1/build.log 2025-10-13 09:11:00.692872706 +0000 +++ b2/build.log 2025-10-13 09:13:42.389058995 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Nov 15 03:31:25 -12 2026 -I: pbuilder-time-stamp: 1794756685 +I: Current time: Mon Oct 13 23:11:10 +14 2025 +I: pbuilder-time-stamp: 1760346670 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying debian-libs.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1612957/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 13 09:11 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='98134a5ebb424b8c81b3a066161bb823' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1612957' - PS1='# ' - PS2='> ' + INVOCATION_ID=c42a799f0c4841e98fd1f48d022bd4f4 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=951471 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NwgXeWet/pbuilderrc_Ejpa --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NwgXeWet/b1 --logfile b1/build.log metaeuk_7-bba0d80+ds-2.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NwgXeWet/pbuilderrc_GjIM --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NwgXeWet/b2 --logfile b2/build.log metaeuk_7-bba0d80+ds-2.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1612957/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -193,7 +225,7 @@ Get: 67 http://deb.debian.org/debian forky/main arm64 libsimde-dev all 0.8.2-3 [467 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 libxxhash-dev arm64 0.8.3-2 [82.6 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 libzstd-dev arm64 1.5.7+dfsg-2 [330 kB] -Fetched 30.1 MB in 0s (149 MB/s) +Fetched 30.1 MB in 0s (144 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20000 files and directories currently installed.) @@ -484,7 +516,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/metaeuk-7-bba0d80+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../metaeuk_7-bba0d80+ds-2_source.changes +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/metaeuk-7-bba0d80+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../metaeuk_7-bba0d80+ds-2_source.changes dpkg-buildpackage: info: source package metaeuk dpkg-buildpackage: info: source version 7-bba0d80+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -577,7 +613,7 @@ -- Found OpenMP -- xxd not found, using xxdi.pl instead -- ShellCheck not found --- Configuring done (4.1s) +-- Configuring done (3.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -607,140 +643,144 @@ make -f lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/depend make -f lib/mmseqs/data/CMakeFiles/generated.dir/build.make lib/mmseqs/data/CMakeFiles/generated.dir/depend make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake "--color=" make -f lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/build.make lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend -make -f data/CMakeFiles/local-generated.dir/build.make data/CMakeFiles/local-generated.dir/depend make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true predictexons.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl VTML80.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=7-bba0d80+ds-2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/version/Version.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl predictexons.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h -[ 4%] Linking CXX static library libversion.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake -[ 5%] Generating ../generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp +[ 4%] Generating ../generated/VTML40.out.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true VTML40.out +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h +[ 4%] Generating ../generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh +[ 5%] Linking CXX static library libversion.a +[ 6%] Generating ../generated/nucleotide.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 -[ 5%] Generating ../generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easypredict.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out +[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -MF CMakeFiles/alp.dir/njn_random.cpp.o.d -o CMakeFiles/alp.dir/njn_random.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_random.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +[ 6%] Built target local-generated +[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o +[ 8%] Generating ../generated/blosum62.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogprobproto.cpp /usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o /usr/bin/ranlib libversion.a make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h -[ 7%] Generating ../generated/nucleotide.out.h -[ 7%] Built target version -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out -[ 7%] Generating ../generated/taxtocontig.sh.h +[ 9%] Linking C static library libmicrotar.a cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstat.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstat.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -[ 8%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp -[ 8%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -[ 8%] Generating ../generated/PAM30.out.h -[ 9%] Generating ../generated/blosum62.out.h +[ 9%] Generating ../generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out +[ 9%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp -[ 9%] Built target local-generated +[ 9%] Built target version +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp -[ 9%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp +/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o +/usr/bin/ranlib libmicrotar.a cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstat.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstat.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp [ 10%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +[ 10%] Built target microtar cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib -[ 10%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c: In function ‘base’: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:373:16: warning: array subscript ‘te_expr[0]’ is partly outside array bounds of ‘unsigned char[16]’ [-Warray-bounds=] 373 | ret->bound = s->bound; @@ -762,7 +802,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:367:16: warning: array subscript ‘te_expr[0]’ is partly outside array bounds of ‘unsigned char[16]’ [-Warray-bounds=] 367 | ret->value = s->value; | ^~ -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib In function ‘new_expr’, inlined from ‘base’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:366:19: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:88:20: note: object of size 16 allocated by ‘malloc’ @@ -778,148 +817,145 @@ 88 | te_expr *ret = malloc(size); | ^~~~~~~~~~~~ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 11%] Linking C static library libmicrotar.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp +[ 10%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h +[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o +[ 11%] Generating ../generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp -/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o -/usr/bin/ranlib libmicrotar.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp -[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -[ 12%] Built target microtar -[ 12%] Generating ../generated/Library255_may17.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl Library255_may17.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 12%] Generating ../generated/libPolished_8.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +[ 11%] Generating ../generated/libPolished_8.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl Library255_may17.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp +[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h -[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp [ 13%] Generating ../generated/cs219.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true cs219.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h [ 14%] Generating ../generated/krona_prelude.html.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl krona_prelude.html > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 15%] Linking C static library libtinyexpr.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake -[ 15%] Built target cacode -[ 16%] Generating ../generated/result_viz_prelude.html.zst.h +[ 15%] Generating ../generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true result_viz_prelude.html.zst cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 17%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl result_viz_prelude.html.zst > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h +[ 16%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true K4000.crf -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl K4000.crf > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h -/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o -/usr/bin/ranlib libtinyexpr.a +[ 16%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -[ 17%] Built target tinyexpr -[ 17%] Generating ../generated/easysearch.sh.h +[ 16%] Generating ../generated/easysearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easysearch.sh +[ 16%] Built target cacode cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 17%] Linking C static library libtinyexpr.a +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easysearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp +[ 17%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h -[ 18%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -[ 18%] Generating ../generated/easycluster.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +[ 17%] Generating ../generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easycluster.sh -[ 18%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easycluster.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp -[ 19%] Generating ../generated/easytaxonomy.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easytaxonomy.sh +/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o +/usr/bin/ranlib libtinyexpr.a +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 17%] Built target tinyexpr cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easytaxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h -[ 20%] Generating ../generated/easyrbh.sh.h +[ 18%] Generating ../generated/easytaxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easytaxonomy.sh +[ 19%] Generating ../generated/easyrbh.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easyrbh.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easytaxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easyrbh.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -[ 20%] Generating ../generated/blastp.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h -[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_basic.cpp -[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp -[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp -[ 21%] Generating ../generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h +[ 19%] Generating ../generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh +[ 19%] Generating ../generated/blastpgp.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 20%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h +[ 20%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o +[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp [ 21%] Generating ../generated/map.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true map.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_basic.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -[ 21%] Built target ksw2 [ 21%] Generating ../generated/rbh.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 22%] Generating ../generated/linclust.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +[ 22%] Generating ../generated/linclust.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true linclust.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl linclust.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h +[ 22%] Built target ksw2 [ 22%] Generating ../generated/clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true clustering.sh +[ 22%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h [ 22%] Generating ../generated/cascaded_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true cascaded_clustering.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl cascaded_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h @@ -927,104 +963,104 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true update_clustering.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h [ 24%] Generating ../generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchtargetprofile.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h [ 25%] Generating ../generated/createindex.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true createindex.sh -[ 25%] Generating ../generated/createtaxdb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true createtaxdb.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl createindex.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h -[ 25%] Generating ../generated/taxpercontig.sh.h +[ 25%] Generating ../generated/createtaxdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true createtaxdb.sh [ 26%] Generating ../generated/translated_search.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh -[ 27%] Generating ../generated/multihitdb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl translated_search.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h +[ 26%] Generating ../generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +[ 27%] Generating ../generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h [ 27%] Generating ../generated/multihitsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitsearch.sh [ 27%] Generating ../generated/enrich.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true enrich.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h [ 28%] Generating ../generated/blastn.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h +[ 28%] Generating ../generated/searchslicedtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h -[ 28%] Generating ../generated/searchslicedtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h [ 28%] Generating ../generated/taxonomy.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated [ 28%] Generating ../generated/linsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true linsearch.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h [ 28%] Generating ../generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true databases.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl linsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h [ 28%] Generating ../generated/nucleotide_clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh [ 28%] Generating ../generated/iterativepp.sh.h -[ 28%] Generating ../generated/tsv2exprofiledb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp +[ 28%] Generating ../generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' @@ -1037,32 +1073,36 @@ make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' make -f lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build.make lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' -[ 28%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Main.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o -MF CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp +[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o +[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/rescorediagonal.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/rescorediagonal.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/BandedNucleotideAligner.cpp:7: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Main.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1096,7 +1136,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp:26: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/BandedNucleotideAligner.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1130,10 +1170,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Main.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp:26: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1169,9 +1206,8 @@ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Main.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Main.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1206,10 +1242,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1245,8 +1280,7 @@ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1281,9 +1315,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.cpp:7: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1317,10 +1352,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.h:12, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/rescorediagonal.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1355,8 +1388,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1391,10 +1426,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.cpp:7: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.h:12, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1427,13 +1461,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1466,11 +1499,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.cpp [ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/ClusteringAlgorithms.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/rescorediagonal.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1478,6 +1514,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 35 | NuclAA(T first) { @@ -1504,15 +1541,11 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp -[ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/A3MReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Clustering.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1545,8 +1578,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Application.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp +[ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/A3MReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1584,9 +1618,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Command.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Command.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Command.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Command.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Application.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Command.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1619,12 +1658,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/BaseMatrix.cpp -[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Command.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Application.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1659,10 +1695,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CommandCaller.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/BaseMatrix.cpp:8: @@ -1698,10 +1730,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o +cd 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.cpp [ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Debug.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1740,8 +1774,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBConcat.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1774,11 +1809,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Debug.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBConcat.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1811,12 +1847,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o -cd 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.cpp -[ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1854,6 +1884,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ExpressionParser.cpp +[ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/HeaderSummarizer.cpp +[ 39%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/KSeqWrapper.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.cpp:1: @@ -1889,8 +1927,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 39%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/KSeqWrapper.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/KSeqWrapper.cpp:3: @@ -1932,11 +1968,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MMseqsMPI.cpp -[ 40%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp -[ 41%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.cpp -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp:1: +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MMseqsMPI.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1969,8 +2002,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MMseqsMPI.cpp:3: +[ 40%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp +[ 41%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.cpp +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2038,17 +2074,20 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 100 | SeqProf(T first) { | ^ -[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp [ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.cpp:34: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2082,10 +2121,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.cpp:34: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2158,8 +2194,6 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/LibraryReader.cpp [ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.cpp -[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SequenceWeights.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.cpp:1: @@ -2195,6 +2229,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SequenceWeights.cpp [ 44%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.cpp [ 44%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/tantan.cpp.o @@ -2203,6 +2239,10 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/UniprotKB.cpp [ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Util.cpp +[ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp +[ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ExtendedSubstitutionMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2240,10 +2280,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp -[ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ExtendedSubstitutionMatrix.cpp [ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Indexer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -2329,8 +2365,6 @@ 30 | CacheFriendlyOperations::~CacheFriendlyOperations(){ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp:30:35: note: remove the ‘< >’ -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -2369,6 +2403,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.h:4, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Main.cpp:1: @@ -2404,6 +2440,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.cpp +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/QueryMatcher.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.h:4, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp:1: @@ -2439,12 +2479,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.cpp -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/QueryMatcher.cpp -[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ReducedMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -2483,6 +2517,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ReducedMatrix.cpp +[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/SequenceLookup.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2520,8 +2558,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/SequenceLookup.cpp +[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/UngappedAlignment.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/SequenceLookup.h:10, @@ -2558,16 +2596,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/UngappedAlignment.cpp -[ 50%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ungappedprefilter.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp -[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2606,11 +2634,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 50%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ungappedprefilter.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2643,6 +2672,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ungappedprefilter.cpp:5: @@ -2678,6 +2709,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2712,8 +2745,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2746,8 +2784,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2786,12 +2822,6 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitSearch.cpp [ 52%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/lca.cpp -[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/addtaxonomy.cpp -[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/NcbiTaxonomy.cpp -[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitSearch.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2826,6 +2856,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/addtaxonomy.cpp +[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/NcbiTaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/NcbiTaxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/lca.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2860,6 +2894,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/addtaxonomy.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2896,6 +2932,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 54%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxseqdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxseqdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxseqdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxseqdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxseqdb.cpp +[ 54%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/aggregatetax.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/NcbiTaxonomy.cpp:6: @@ -2931,8 +2969,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 54%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/aggregatetax.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxdb.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2969,10 +3005,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp -[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxseqdb.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/aggregatetax.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3006,7 +3040,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/aggregatetax.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxseqdb.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3039,8 +3073,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3073,8 +3109,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxmapping.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3107,12 +3145,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/taxonomyreport.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/taxonomyreport.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/taxonomyreport.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp -[ 56%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxmapping.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3147,10 +3179,18 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 56%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/taxonomyreport.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp +[ 56%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp [ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3183,11 +3223,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmersearch.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3224,8 +3263,7 @@ from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3258,14 +3296,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmersearch.cpp [ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.cpp [ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignall.cpp -[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.cpp:4: @@ -3301,8 +3335,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -3334,14 +3366,6 @@ 98 | SeqProf() {} | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 100 | SeqProf(T first) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 105 | SeqProf(T first, T second) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignall.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3351,6 +3375,14 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 100 | SeqProf(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 105 | SeqProf(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 35 | NuclAA(T first) { @@ -3376,8 +3408,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp +[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp +[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3412,8 +3446,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3447,8 +3484,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3483,6 +3519,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/clusthash.cpp +[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -3520,8 +3558,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3558,8 +3594,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convert2fasta.cpp -[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertalignments.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convert2fasta.cpp:9: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3594,6 +3628,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertalignments.cpp [ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertca3m.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -3632,6 +3668,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertkb.cpp +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertca3m.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3666,6 +3704,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertkb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3700,10 +3740,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3738,11 +3774,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp:8: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3775,11 +3811,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp:8: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3854,6 +3890,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/db2tar.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/db2tar.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/db2tar.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/db2tar.cpp [ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/indexdb.cpp +[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/db2tar.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3888,16 +3926,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp -[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createseqfiledb.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createsubdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/indexdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3930,10 +3960,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/view.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/view.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/indexdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3966,8 +3996,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createseqfiledb.cpp +[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createsubdb.cpp +[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/view.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/view.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createsubdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createseqfiledb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4001,9 +4039,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createseqfiledb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createsubdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4072,6 +4108,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 66%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createtsv.cpp +[ 66%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diffseqdbs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createtsv.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4106,8 +4144,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 66%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -4144,8 +4180,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractalignedregion.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4180,6 +4214,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractalignedregion.cpp [ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractdomains.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -4219,8 +4255,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractdomains.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4255,8 +4289,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp [ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp +[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4291,13 +4329,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp:78:13: warning: ‘bool compareHitsByKeyScore(const Matcher::result_t&, const Matcher::result_t&)’ defined but not used [-Wunused-function] - 78 | static bool compareHitsByKeyScore(const Matcher::result_t &first, const Matcher::result_t &second) { - | ^~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4330,8 +4363,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp:78:13: warning: ‘bool compareHitsByKeyScore(const Matcher::result_t&, const Matcher::result_t&)’ defined but not used [-Wunused-function] + 78 | static bool compareHitsByKeyScore(const Matcher::result_t &first, const Matcher::result_t &second) { + | ^~~~~~~~~~~~~~~~~~~~~ +[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4364,12 +4402,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp -[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4402,13 +4437,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp [ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/gff2db.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/gff2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/gff2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/gff2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/gff2db.cpp [ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4441,6 +4477,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -4448,11 +4486,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp:1: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 26 | NuclAA(const NuclAA &value) { - | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} @@ -4482,6 +4515,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp:1: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 26 | NuclAA(const NuclAA &value) { + | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} @@ -4511,10 +4551,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp +[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4547,14 +4587,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp +[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeclusters.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeclusters.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4587,14 +4625,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp -[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeclusters.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4627,10 +4663,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeclusters.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4663,8 +4701,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp [ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergedbs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -4703,10 +4739,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp -[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createclusterdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -4744,16 +4776,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp [ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2result.cpp -[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/nrtotaxmapping.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2result.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createclusterdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4786,10 +4818,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/nrtotaxmapping.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2result.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4822,10 +4858,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createclusterdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4892,12 +4930,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-MF CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp -[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/pairaln.cpp -[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/prefixid.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4932,6 +4964,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/pairaln.cpp +[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/prefixid.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/pairaln.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5002,6 +5038,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2pssm.cpp +[ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2neff.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2pssm.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5036,8 +5074,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2neff.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2neff.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5075,8 +5111,8 @@ [ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2seq.cpp [ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/recoverlongestorf.cpp +[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2seq.cpp:1: @@ -5112,8 +5148,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/recoverlongestorf.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5148,10 +5182,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp:6: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5184,8 +5218,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 78%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2msa.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp:6: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5218,10 +5256,17 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 78%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2msa.cpp [ 78%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2rbh.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2rbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2rbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2rbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2rbh.cpp +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp: In function ‘int result2flat(int, const char**, const Command&)’: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:65:37: warning: ignoring return value of ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator; size_type = long unsigned int]’, declared with attribute ‘nodiscard’ [-Wunused-result] + 65 | dbKeyBuffer.size(); + | ~~~~~~~~~~~~~~~~^~ +In file included from /usr/include/c++/15/string:56, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:7: +/usr/include/c++/15/bits/basic_string.h:1163:7: note: declared here + 1163 | size() const _GLIBCXX_NOEXCEPT + | ^~~~ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -5260,15 +5305,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp: In function ‘int result2flat(int, const char**, const Command&)’: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:65:37: warning: ignoring return value of ‘std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator; size_type = long unsigned int]’, declared with attribute ‘nodiscard’ [-Wunused-result] - 65 | dbKeyBuffer.size(); - | ~~~~~~~~~~~~~~~~^~ -In file included from /usr/include/c++/15/string:56, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:7: -/usr/include/c++/15/bits/basic_string.h:1163:7: note: declared here - 1163 | size() const _GLIBCXX_NOEXCEPT - | ^~~~ +[ 79%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2profile.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2profile.cpp +[ 79%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2repseq.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2repseq.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2repseq.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2repseq.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2repseq.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -5305,12 +5345,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 79%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2profile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2repseq.cpp -[ 79%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2stats.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2repseq.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5345,8 +5379,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 80%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/reverseseq.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/reverseseq.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/reverseseq.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/reverseseq.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/reverseseq.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -5385,6 +5417,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 79%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2stats.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2stats.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2stats.h:4, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2stats.cpp:1: @@ -5420,6 +5454,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 80%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/reverseseq.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy 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-DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -5456,6 +5492,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp +[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/cpmvrmlndb.cpp:1: @@ -5491,12 +5531,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp -[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sequence2profile.cpp -[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5531,6 +5565,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5606,10 +5642,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitsequence.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5643,7 +5677,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5676,8 +5710,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitsequence.cpp [ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/subtractdbs.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/subtractdbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/subtractdbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/subtractdbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp +[ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizealis.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitsequence.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5712,10 +5750,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 84%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizealis.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5748,12 +5786,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp +[ 84%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeresult.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizealis.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5786,10 +5822,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 84%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeresult.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5860,8 +5896,6 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated 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-MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizetabs.cpp [ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp -[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizetabs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5897,7 +5931,9 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5930,12 +5966,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp [ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translatenucs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5972,6 +6008,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translateaa.cpp [ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp +[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, @@ -6009,6 +6047,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tar2db.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -6047,7 +6087,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6080,10 +6120,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6116,8 +6154,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tar2db.cpp +[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/unpackdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tar2db.cpp:1: @@ -6153,8 +6191,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/unpackdb.cpp [ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -6191,8 +6227,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/versionstring.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -6227,6 +6261,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/versionstring.cpp [ 89%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp [ 89%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Cluster.cpp.o @@ -6234,8 +6270,7 @@ [ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/ClusterUpdate.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Cluster.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6269,7 +6304,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Cluster.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6302,8 +6338,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Databases.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/ClusterUpdate.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -6338,6 +6372,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Databases.cpp +[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasySearch.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Databases.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -6372,12 +6412,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o -cd 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CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linclust.cpp -[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasySearch.cpp +[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linclust.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasySearch.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6410,18 +6452,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp [ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyCluster.cpp -[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasySearch.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linclust.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6454,6 +6488,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp +[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -6492,8 +6530,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyCluster.cpp:3: @@ -6529,14 +6565,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-MF CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp -[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6570,8 +6601,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6604,9 +6634,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linsearch.cpp +[ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6639,12 +6676,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp -[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Taxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6713,6 +6747,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Taxonomy.cpp [ 95%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyTaxonomy.cpp [ 95%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/CreateIndex.cpp.o @@ -6754,7 +6790,9 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyTaxonomy.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6788,19 +6826,11 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp:1: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 26 | NuclAA(const NuclAA &value) { - | ^ -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/MMseqsBase.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ @@ -6813,6 +6843,28 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 91 | SeqProf(const SeqProf &value) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 98 | SeqProf() {} + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 100 | SeqProf(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 105 | SeqProf(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/CreateIndex.cpp:1: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 26 | NuclAA(const NuclAA &value) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ @@ -6833,22 +6885,6 @@ 98 | SeqProf() {} | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 91 | SeqProf(const SeqProf &value) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 100 | SeqProf(T first) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 98 | SeqProf() {} - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 105 | SeqProf(T first, T second) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 100 | SeqProf(T first) { | ^ @@ -6858,7 +6894,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/CreateIndex.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyTaxonomy.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6904,27 +6940,27 @@ make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' make -f 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/unitesetstofasta.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o -MF CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o.d -o CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/EasyPredict.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o -MF CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o.d -o CMakeFiles/metaeuk.dir/workflow/TaxToContig.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/TaxToContig.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/metaeuk.cpp.o -MF CMakeFiles/metaeuk.dir/metaeuk.cpp.o.d -o CMakeFiles/metaeuk.dir/metaeuk.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/reduceredundancy.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/collectoptimalset.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6941,25 +6977,9 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 91 | SeqProf(const SeqProf &value) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 98 | SeqProf() {} - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 100 | SeqProf(T first) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 105 | SeqProf(T first, T second) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/collectoptimalset.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/unitesetstofasta.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6992,9 +7012,25 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 91 | SeqProf(const SeqProf &value) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 98 | SeqProf() {} + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 100 | SeqProf(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 105 | SeqProf(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/unitesetstofasta.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/PredictExons.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7028,8 +7064,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/resultspercontig.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7063,7 +7098,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/resultspercontig.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/reduceredundancy.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7098,7 +7134,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/groupstoacc.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7133,7 +7169,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/PredictExons.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/TaxToContig.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7202,8 +7238,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/TaxToContig.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/groupstoacc.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7245,7 +7281,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-aarch64-linux-gnu' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-UHzL8WN4 + rm -fr -- /tmp/dh-xdg-rundir-Y8WHLcFx create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/metaeuk.substvars debian/metaeuk-examples.substvars @@ -7293,18 +7329,18 @@ cd debian/metaeuk cd debian/metaeuk-examples chmod a-x usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian - chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastp.sh usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh gzip -9nf usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian - gzip -9nf usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastp.sh usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh cd '/build/reproducible-path/metaeuk-7-bba0d80+ds' + chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastp.sh usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh + gzip -9nf usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastp.sh usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh cd '/build/reproducible-path/metaeuk-7-bba0d80+ds' dh_fixperms find debian/metaeuk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/metaeuk-examples ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/metaeuk/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk-examples/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/metaeuk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/metaeuk/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/metaeuk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/metaeuk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x @@ -7345,28 +7381,28 @@ echo misc:Depends= >> debian/metaeuk-examples.substvars echo misc:Pre-Depends= >> debian/metaeuk-examples.substvars dpkg-gencontrol -pmetaeuk-examples -ldebian/changelog -Tdebian/metaeuk-examples.substvars -cdebian/control -Pdebian/metaeuk-examples "-Vsimde:Built-Using=simde (= 0.8.2-3), " - chmod 0644 -- debian/metaeuk-examples/DEBIAN/control chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pmetaeuk -ldebian/changelog -Tdebian/metaeuk.substvars -cdebian/control -Pdebian/metaeuk "-Vsimde:Built-Using=simde (= 0.8.2-3), " + chmod 0644 -- debian/metaeuk-examples/DEBIAN/control chmod 0644 -- debian/metaeuk/DEBIAN/control make[1]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds' dh_md5sums - install -m0755 -d debian/metaeuk-examples/DEBIAN - cd debian/metaeuk-examples >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums install -m0755 -d debian/metaeuk/DEBIAN cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums + install -m0755 -d debian/metaeuk-examples/DEBIAN + cd debian/metaeuk-examples >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/metaeuk/DEBIAN/md5sums install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN + chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums cd debian/.debhelper/metaeuk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/metaeuk .. dpkg-deb --root-owner-group --build debian/.debhelper/metaeuk/dbgsym-root .. dpkg-deb --root-owner-group --build debian/metaeuk-examples .. +dpkg-deb: building package 'metaeuk-dbgsym' in '../metaeuk-dbgsym_7-bba0d80+ds-2_arm64.deb'. dpkg-deb: building package 'metaeuk-examples' in '../metaeuk-examples_7-bba0d80+ds-2_all.deb'. dpkg-deb: building package 'metaeuk' in '../metaeuk_7-bba0d80+ds-2_arm64.deb'. -dpkg-deb: building package 'metaeuk-dbgsym' in '../metaeuk-dbgsym_7-bba0d80+ds-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../metaeuk_7-bba0d80+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../metaeuk_7-bba0d80+ds-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -7374,12 +7410,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/951471/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1612957 and its subdirectories -I: Current time: Sun Nov 15 03:33:59 -12 2026 -I: pbuilder-time-stamp: 1794756839 +I: removing directory /srv/workspace/pbuilder/951471 and its subdirectories +I: Current time: Mon Oct 13 23:13:41 +14 2025 +I: pbuilder-time-stamp: 1760346821