Diff of the two buildlogs: -- --- b1/build.log 2025-08-31 06:17:05.841816948 +0000 +++ b2/build.log 2025-08-31 07:56:13.709178608 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Oct 2 22:59:20 -12 2026 -I: pbuilder-time-stamp: 1791025160 +I: Current time: Sun Aug 31 20:17:16 +14 2025 +I: pbuilder-time-stamp: 1756621036 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying avoid-gcc-crash.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2866456/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 31 06:17 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='d84893c72aad434e8c3d366cd42482af' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2866456' - PS1='# ' - PS2='> ' + INVOCATION_ID=cd172fe897724c7191cfe27153a416a4 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3580227 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rqewixXr/pbuilderrc_dUJZ --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rqewixXr/b1 --logfile b1/build.log ncbi-igblast_1.20.0-2.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rqewixXr/pbuilderrc_xIaj --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rqewixXr/b2 --logfile b2/build.log ncbi-igblast_1.20.0-2.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.12.41+deb13-cloud-arm64 #1 SMP Debian 6.12.41-1 (2025-08-12) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.41+deb13-cloud-arm64 #1 SMP Debian 6.12.41-1 (2025-08-12) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2866456/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -164,7 +196,7 @@ Get: 46 http://deb.debian.org/debian forky/main arm64 libncbi-wvdb-dev arm64 3.2.1+dfsg-2 [1269 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 libncbi-vdb-dev arm64 3.2.1+dfsg-2 [1572 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 time arm64 1.9-0.2+b1 [48.1 kB] -Fetched 19.9 MB in 0s (68.9 MB/s) +Fetched 19.9 MB in 0s (140 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20011 files and directories currently installed.) @@ -371,7 +403,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-2_source.changes +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-2_source.changes dpkg-buildpackage: info: source package ncbi-igblast dpkg-buildpackage: info: source version 1.20.0-2 dpkg-buildpackage: info: source distribution unstable @@ -399,74 +435,74 @@ done ) ; \ ) ; \ done -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: 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../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory make[1]: [debian/rules:39: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile c++/GCC* rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -973,7 +1009,7 @@ checking for libungif... no checking for libXpm... no checking for freetype-config... no -./src/build-system/configure: line 29815: cd: /nonexistent/first-build: No such file or directory +/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/configure: line 29815: cd: /nonexistent/second-build: No such file or directory checking for libftgl... no checking for libmagic... no checking for libmimetic... no @@ -1261,7 +1297,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c. gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DNCBI_APP_BUILT_AS=run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o gcc -Wl,-z,relro run_with_lock.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lm -lpthread -o run_with_lock -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/run_with_lock make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' @@ -5518,7 +5554,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/ncbi_pool_balancer.cpp -o ncbi_pool_balancer.o /bin/rm -f libxncbi.a .libxncbi.a.stamp ar cr libxncbi.a ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o ncbi_fast.o ncbi_dbsvcmapper.o ncbi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxncbi.a /bin/ln -f .xncbi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xncbi.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib' @@ -5709,7 +5745,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.a .libtest_mt.a.stamp ar cr libtest_mt.a test_mt.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libtest_mt.a /bin/ln -f .test_mt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.test_mt.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib' @@ -8926,7 +8962,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/crc32_sse.cpp -o crc32_sse.o /bin/rm -f libxutil.a .libxutil.a.stamp ar cr libxutil.a random_gen.o utf8.o checksum.o checksum_cityhash.o checksum_farmhash.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o cache_async.o multipattern_search.o crc32_sse.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxutil.a /bin/ln -f .xutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xutil.dep make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util' @@ -9001,7 +9037,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -DHAVE_CONFIG_H -DPCRE_NO_UTF16 -DPCRE_NO_UTF32 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcreposix.c -o pcreposix.o /bin/rm -f libregexp.a .libregexp.a.stamp ar cr libregexp.a pcre_byte_order.o pcre_chartables.o pcre_compile.o pcre_config.o pcre_dfa_exec.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_string_utils.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o pcreposix.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libregexp.a /bin/ln -f .regexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.regexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' @@ -9012,7 +9048,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcretest.c -o pcretest.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcre_printint.c -o pcre_printint.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 pcretest.o pcre_printint.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lregexp -o test_pcre -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/test_pcre make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' @@ -9316,7 +9352,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/convert_dates_iso8601.cpp -o convert_dates_iso8601.o /bin/rm -f libxregexp.a .libxregexp.a.stamp ar cr libxregexp.a regexp.o arg_regexp.o mask_regexp.o convert_dates_iso8601.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxregexp.a /bin/ln -f .xregexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xregexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/xregexp' @@ -9395,7 +9431,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o /bin/rm -f libxregexp_template_tester.a .libxregexp_template_tester.a.stamp ar cr libxregexp_template_tester.a regexp_template_tester.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxregexp_template_tester.a /bin/ln -f .xregexp_template_tester.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xregexp_template_tester.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/xregexp' @@ -13973,7 +14009,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lxutil -lxncbi -lxregexp -lregexp -lm -lpthread -o project_tree_builder -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/project_tree_builder make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' @@ -17540,7 +17576,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/rpcbase.cpp -o rpcbase.o /bin/rm -f libxser.a .libxser.a.stamp ar cr libxser.a hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxser.a /bin/ln -f .xser.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial' @@ -21994,7 +22030,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' @@ -22088,7 +22124,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/new_module.sh gencoll_client all Waiting for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock. -Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 2934038 (make_asn) +Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 3630568 (make_asn) /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++ builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build DATATOOL=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/datatool -oR /build/reproducible-path/ncbi-igblast-1.20.0/c++ \ @@ -23295,7 +23331,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.a .libalign_format.a.stamp ar cr libalign_format.a format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libalign_format.a /bin/ln -f .align_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.align_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/align_format' @@ -23524,7 +23560,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /bin/rm -f libbiblio.a .libbiblio.a.stamp ar cr libbiblio.a biblio__.o biblio___.o citation_base.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libbiblio.a /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/biblio' @@ -23534,22 +23570,22 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' @@ -23686,7 +23722,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' @@ -23786,7 +23822,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /bin/rm -f libblast_services.a .libblast_services.a.stamp ar cr libblast_services.a blast_services.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblast_services.a /bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blast_services.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services' @@ -23882,7 +23918,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blast_sra_input/blast_sra_input.cpp -o blast_sra_input.o /bin/rm -f libblast_sra_input.a .libblast_sra_input.a.stamp ar cr libblast_sra_input.a blast_sra_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblast_sra_input.a /bin/ln -f .blast_sra_input.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blast_sra_input.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input' @@ -24042,7 +24078,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.a .libblastdb.a.stamp ar cr libblastdb.a blastdb__.o blastdb___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblastdb.a /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastdb' @@ -24409,7 +24445,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o /bin/rm -f libblastdb_format.a .libblastdb_format.a.stamp ar cr libblastdb_format.a seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblastdb_format.a /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/blastdb_format' @@ -26156,7 +26192,7 @@ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o /bin/rm -f libblastinput.a .libblastinput.a.stamp ar cr libblastinput.a blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblastinput.a /bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blastinput.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput' @@ -26339,7 +26375,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /bin/rm -f libblastxml.a .libblastxml.a.stamp ar cr libblastxml.a blastxml__.o blastxml___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblastxml.a /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml' @@ -26522,7 +26558,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libblastxml2.a .libblastxml2.a.stamp ar cr libblastxml2.a blastxml2__.o blastxml2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libblastxml2.a /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml2' @@ -26561,7 +26597,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.a .libcomposition_adjustment.a.stamp ar cr libcomposition_adjustment.a compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libcomposition_adjustment.a /bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.composition_adjustment.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/composition_adjustment' @@ -28419,12 +28455,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/dbapi_pool_balancer.cpp -o dbapi_pool_balancer.o /bin/rm -f libdbapi_driver.a .libdbapi_driver.a.stamp ar cr libdbapi_driver.a handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libdbapi_driver.a /bin/ln -f .dbapi_driver.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.dbapi_driver.dep /bin/rm -f libdbapi_driver-dll.so .libdbapi_driver-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libdbapi_driver-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libdbapi_driver-dll.so /bin/ln -f .dbapi_driver-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.dbapi_driver-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver' @@ -28656,7 +28692,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o /bin/rm -f libefetch.a .libefetch.a.stamp ar cr libefetch.a efetch__.o efetch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libefetch.a /bin/ln -f .efetch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.efetch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch' @@ -28839,7 +28875,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o /bin/rm -f libegquery.a .libegquery.a.stamp ar cr libegquery.a egquery__.o egquery___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libegquery.a /bin/ln -f .egquery.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.egquery.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/egquery' @@ -29022,7 +29058,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o /bin/rm -f libehistory.a .libehistory.a.stamp ar cr libehistory.a ehistory__.o ehistory___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libehistory.a /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/ehistory' @@ -29205,7 +29241,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o /bin/rm -f libeinfo.a .libeinfo.a.stamp ar cr libeinfo.a einfo__.o einfo___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libeinfo.a /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/einfo' @@ -29388,7 +29424,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o /bin/rm -f libelink.a .libelink.a.stamp ar cr libelink.a elink__.o elink___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libelink.a /bin/ln -f .elink.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/elink' @@ -29571,7 +29607,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/epost/epost___.cpp -o epost___.o /bin/rm -f libepost.a .libepost.a.stamp ar cr libepost.a epost__.o epost___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libepost.a /bin/ln -f .epost.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/epost' @@ -29754,7 +29790,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o /bin/rm -f libesearch.a .libesearch.a.stamp ar cr libesearch.a esearch__.o esearch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libesearch.a /bin/ln -f .esearch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.esearch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esearch' @@ -29937,7 +29973,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o /bin/rm -f libespell.a .libespell.a.stamp ar cr libespell.a espell__.o espell___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libespell.a /bin/ln -f .espell.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.espell.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/espell' @@ -30121,7 +30157,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o /bin/rm -f libesummary.a .libesummary.a.stamp ar cr libesummary.a esummary__.o esummary___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libesummary.a /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esummary' @@ -30928,7 +30964,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o /bin/rm -f libeutils.a .libeutils.a.stamp ar cr libeutils.a eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libeutils.a /bin/ln -f .eutils.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.eutils.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/api' @@ -31110,7 +31146,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/rm -f libgbseq.a .libgbseq.a.stamp ar cr libgbseq.a gbseq__.o gbseq___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libgbseq.a /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/gbseq' @@ -31336,7 +31372,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o /bin/rm -f libgene_info.a .libgene_info.a.stamp ar cr libgene_info.a gene_info.o gene_info_reader.o file_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libgene_info.a /bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.gene_info.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader' @@ -31590,7 +31626,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgeneral.a .libgeneral.a.stamp ar cr libgeneral.a general__.o general___.o uoconv.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libgeneral.a /bin/ln -f .general.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.general.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general' @@ -31757,7 +31793,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.a .libgenome_collection.a.stamp ar cr libgenome_collection.a genome_collection__.o genome_collection___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libgenome_collection.a /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll' @@ -31917,7 +31953,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id1/id1___.cpp -o id1___.o /bin/rm -f libid1.a .libid1.a.stamp ar cr libid1.a id1__.o id1___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libid1.a /bin/ln -f .id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id1' @@ -32077,7 +32113,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.a .libid2.a.stamp ar cr libid2.a id2__.o id2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libid2.a /bin/ln -f .id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.id2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id2' @@ -32180,7 +32216,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.a .libigblast.a.stamp ar cr libigblast.a igblast.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libigblast.a /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/igblast' @@ -32220,7 +32256,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/lmdb/midl.c -o midl.o /bin/rm -f liblmdb.a .liblmdb.a.stamp ar cr liblmdb.a mdb.o midl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/liblmdb.a /bin/ln -f .lmdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.lmdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdb' @@ -32402,7 +32438,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /bin/rm -f libmedlars.a .libmedlars.a.stamp ar cr libmedlars.a medlars__.o medlars___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libmedlars.a /bin/ln -f .medlars.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.medlars.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medlars' @@ -32562,7 +32598,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.a .libmedline.a.stamp ar cr libmedline.a medline__.o medline___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libmedline.a /bin/ln -f .medline.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medline' @@ -32751,7 +32787,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla___.cpp -o mla___.o /bin/rm -f libmla.a .libmla.a.stamp ar cr libmla.a mla__.o mla___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libmla.a /bin/ln -f .mla.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mla' @@ -32916,7 +32952,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.a .libmlacli.a.stamp ar cr libmlacli.a mla_client.o mla_client_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libmlacli.a /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mla' @@ -33180,7 +33216,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.a .libncbi_xloader_blastdb.a.stamp ar cr libncbi_xloader_blastdb.a bdbloader.o cached_sequence.o local_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xloader_blastdb.a /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33346,7 +33382,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb_rmt.a .libncbi_xloader_blastdb_rmt.a.stamp ar cr libncbi_xloader_blastdb_rmt.a bdbloader_rmt.o remote_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xloader_blastdb_rmt.a /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33506,7 +33542,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpub.a .libpub.a.stamp ar cr libpub.a pub__.o pub___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libpub.a /bin/ln -f .pub.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pub' @@ -35435,7 +35471,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.a .libseq.a.stamp ar cr libseq.a seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseq.a /bin/ln -f .seq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq' @@ -35595,7 +35631,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /bin/rm -f libseqcode.a .libseqcode.a.stamp ar cr libseqcode.a seqcode__.o seqcode___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqcode.a /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqcode' @@ -35755,7 +35791,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.a .libseqedit.a.stamp ar cr libseqedit.a seqedit__.o seqedit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqedit.a /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqedit' @@ -35997,7 +36033,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /bin/rm -f libseqset.a .libseqset.a.stamp ar cr libseqset.a seqset__.o seqset___.o gb_release_file.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqset.a /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqset' @@ -36157,7 +36193,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.a .libseqsplit.a.stamp ar cr libseqsplit.a seqsplit__.o seqsplit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqsplit.a /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqsplit' @@ -36588,7 +36624,7 @@ u++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.a .libsequtil.a.stamp ar cr libsequtil.a sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libsequtil.a /bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.sequtil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/sequtil' @@ -36748,7 +36784,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/submit/submit___.cpp -o submit___.o /bin/rm -f libsubmit.a .libsubmit.a.stamp ar cr libsubmit.a submit__.o submit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libsubmit.a /bin/ln -f .submit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/submit' @@ -37688,7 +37724,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /bin/rm -f libxcompress.a .libxcompress.a.stamp ar cr libxcompress.a compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxcompress.a /bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xcompress.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/api' @@ -37754,6 +37790,7 @@ /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect TMPL=xthrserv flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' +/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/run_with_lock: Unable to rename log file make_xthrserv.log.new: No such file or directory. make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' cd connect/ && /usr/bin/make APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' @@ -39594,7 +39631,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls/ssl_tls13_keys.c -o mbedtls/ssl_tls13_keys.o /bin/rm -f libxconnect.a .libxconnect.a.stamp ar cr libxconnect.a ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_dispd.o ncbi_lbos.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/aria.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/chacha20.o mbedtls/chachapoly.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/constant_time.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hkdf.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/memory_buffer_alloc.o mbedtls/mps_reader.o mbedtls/mps_trace.o mbedtls/nist_kw.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/platform_util.o mbedtls/poly1305.o mbedtls/psa_crypto.o mbedtls/psa_crypto_aead.o mbedtls/psa_crypto_cipher.o mbedtls/psa_crypto_client.o mbedtls/psa_crypto_driver_wrappers.o mbedtls/psa_crypto_ecp.o mbedtls/psa_crypto_hash.o mbedtls/psa_crypto_mac.o mbedtls/psa_crypto_rsa.o mbedtls/psa_crypto_se.o mbedtls/psa_crypto_slot_management.o mbedtls/psa_crypto_storage.o mbedtls/psa_its_file.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/rsa_internal.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_msg.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o mbedtls/ssl_tls13_keys.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxconnect.a /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' @@ -45687,7 +45724,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.a .libxobjmgr.a.stamp ar cr libxobjmgr.a seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxobjmgr.a /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr' @@ -46850,12 +46887,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader.a /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader.dep /bin/rm -f libncbi_xreader-dll.so .libncbi_xreader-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader-dll.so /bin/ln -f .ncbi_xreader-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47480,12 +47517,12 @@ _loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xloader_genbank.dep /bin/rm -f libncbi_xloader_genbank-dll.so .libncbi_xloader_genbank-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xloader_genbank-dll.so /bin/ln -f .ncbi_xloader_genbank-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xloader_genbank-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47683,12 +47720,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_cache.a /bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_cache.dep /bin/rm -f libncbi_xreader_cache-dll.so .libncbi_xreader_cache-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_cache-dll.so /bin/ln -f .ncbi_xreader_cache-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_cache-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/cache' @@ -47796,12 +47833,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp ar cr libncbi_xreader_id1.a reader_id1.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_id1.a /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_id1.dep /bin/rm -f libncbi_xreader_id1-dll.so .libncbi_xreader_id1-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id1.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_id1-dll.so /bin/ln -f .ncbi_xreader_id1-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_id1-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id1' @@ -47909,12 +47946,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp ar cr libncbi_xreader_id2.a reader_id2.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_id2.a /bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_id2.dep /bin/rm -f libncbi_xreader_id2-dll.so .libncbi_xreader_id2-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id2.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libncbi_xreader_id2-dll.so /bin/ln -f .ncbi_xreader_id2-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.ncbi_xreader_id2-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id2' @@ -48786,7 +48823,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.a .libproteinkmer.a.stamp ar cr libproteinkmer.a blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libproteinkmer.a /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer' @@ -48947,7 +48984,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.a .libpsg_client.a.stamp ar cr libpsg_client.a psg_client.o psg_client_transport.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libpsg_client.a /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client' @@ -49107,7 +49144,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o /bin/rm -f libpubmed.a .libpubmed.a.stamp ar cr libpubmed.a pubmed__.o pubmed___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libpubmed.a /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pubmed' @@ -49277,7 +49314,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.a .libscoremat.a.stamp ar cr libscoremat.a scoremat__.o scoremat___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libscoremat.a /bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.scoremat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/scoremat' @@ -51039,7 +51076,7 @@ BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /bin/rm -f libseqdb.a .libseqdb.a.stamp ar cr libseqdb.a seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqdb.a /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader' @@ -51773,10 +51810,11 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /bin/rm -f libseqmasks_io.a .libseqmasks_io.a.stamp ar cr libseqmasks_io.a mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libseqmasks_io.a /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io' +/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/run_with_lock: Unable to rename log file make_seqmasks_io.log.new: No such file or directory. make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io' cd sra/readers/sra/ && /usr/bin/make sources make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers/sra' @@ -52467,13 +52505,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/sra/readers/sra/snpread.cpp -o snpread.o /bin/rm -f libsraread.a .libsraread.a.stamp ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libsraread.a /bin/ln -f .sraread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.sraread.dep /bin/rm -f libsraread-dll.so .libsraread-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libsraread-dll.so -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread : libsraread-dll.so -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libsraread-dll.so /bin/ln -f .sraread-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.sraread-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers/sra' @@ -52500,7 +52538,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.a .libtables.a.stamp ar cr libtables.a raw_scoremat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libtables.a /bin/ln -f .tables.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.tables.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/tables' @@ -52991,7 +53029,7 @@ roducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.a .libtaxon1.a.stamp ar cr libtaxon1.a taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libtaxon1.a /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon1' @@ -53246,7 +53284,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o /bin/rm -f libtaxon3.a .libtaxon3.a.stamp ar cr libtaxon3.a taxon3__.o taxon3___.o taxon3.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libtaxon3.a /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon3' @@ -53406,7 +53444,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o /bin/rm -f libuilist.a .libuilist.a.stamp ar cr libuilist.a uilist__.o uilist___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libuilist.a /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/uilist' @@ -53498,7 +53536,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/profile/rtprofile.cpp -o rtprofile.o /bin/rm -f libutrtprof.a .libutrtprof.a.stamp ar cr libutrtprof.a rtprofile.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libutrtprof.a /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/profile' @@ -53684,7 +53722,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.a .libvalid.a.stamp ar cr libvalid.a valid__.o valid___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libvalid.a /bin/ln -f .valid.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.valid.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/valid' @@ -53844,7 +53882,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.a .libvariation.a.stamp ar cr libvariation.a variation__.o variation___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libvariation.a /bin/ln -f .variation.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation' @@ -54992,7 +55030,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/align/util/best_placement.cpp -o best_placement.o /bin/rm -f libxalgoalignutil.a .libxalgoalignutil.a.stamp ar cr libxalgoalignutil.a align_shadow.o blast_tabular.o score_builder.o score_lookup.o align_filter.o genomic_compart.o patch_sequence.o align_compare.o align_sort.o depth_filter.o tabular_fmt.o collection_score.o named_collection_score_impl.o best_placement.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalgoalignutil.a /bin/ln -f .xalgoalignutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalgoalignutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align/util' @@ -55435,7 +55473,7 @@ ex_search.o /bin/rm -f libxalgoblastdbindex.a .libxalgoblastdbindex.a.stamp ar cr libxalgoblastdbindex.a sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalgoblastdbindex.a /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/dbindex' @@ -55535,7 +55573,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.a .libxalgodustmask.a.stamp ar cr libxalgodustmask.a symdust.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalgodustmask.a /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/dustmask' @@ -57431,7 +57469,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/sequence/micro_introns.cpp -o micro_introns.o /bin/rm -f libxalgoseq.a .libxalgoseq.a.stamp ar cr libxalgoseq.a adapter_search.o cpg.o nuc_prop.o orf.o prot_prop.o regexp_loc.o seq_match.o restriction.o antigenic.o coiled_coil.o signal_seq.o make_cdr_prods.o find_pattern.o gene_model.o project_exons.o transform_align.o annot_compare.o compare_feats.o align_group.o masking_delta.o align_cleanup.o util.o gap_analysis.o internal_stops.o micro_introns.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalgoseq.a /bin/ln -f .xalgoseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalgoseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence' @@ -61743,7 +61781,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.a .libxalgowinmask.a.stamp ar cr libxalgowinmask.a seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalgowinmask.a /bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalgowinmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/winmask' @@ -63643,7 +63681,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o /bin/rm -f libxalnmgr.a .libxalnmgr.a.stamp ar cr libxalnmgr.a aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxalnmgr.a /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/alnmgr' @@ -70493,7 +70531,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.a .libxblast.a.stamp ar cr libxblast.a .core_aa_ungapped.o .core_blast_diagnostics.o .core_blast_engine.o .core_blast_extend.o .core_blast_filter.o .core_blast_gapalign.o .core_blast_hits.o .core_blast_hspstream.o .core_blast_itree.o .core_blast_kappa.o .core_blast_lookup.o .core_blast_aalookup.o .core_blast_aascan.o .core_blast_nalookup.o .core_blast_nascan.o .core_blast_message.o .core_blast_options.o .core_blast_psi.o .core_na_ungapped.o .core_blast_psi_priv.o .core_blast_seg.o .core_blast_seqsrc.o .core_blast_setup.o .core_blast_stat.o .core_blast_traceback.o .core_blast_util.o .core_gapinfo.o .core_greedy_align.o .core_hspfilter_collector.o .core_hspfilter_besthit.o .core_hspfilter_culling.o .core_link_hsps.o .core_lookup_util.o .core_lookup_wrap.o .core_matrix_freq_ratios.o .core_ncbi_std.o .core_ncbi_math.o .core_blast_encoding.o .core_pattern.o .core_phi_extend.o .core_phi_gapalign.o .core_phi_lookup.o .core_blast_parameters.o .core_blast_posit.o .core_blast_program.o .core_blast_query_info.o .core_blast_tune.o .core_blast_sw.o .core_blast_dynarray.o .core_split_query.o .core_gencode_singleton.o .core_index_ungapped.o .core_blast_traceback_mt_priv.o .core_blast_hspstream_mt_utils.o .core_boost_erf.o .core_jumper.o .core_hspfilter_mapper.o .core_spliced_hits.o blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxblast.a /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xblast.dep rm .core_phi_gapalign.c .core_blast_dynarray.c .core_boost_erf.c .core_blast_itree.c .core_blast_seqsrc.c .core_ncbi_math.c .core_blast_engine.c .core_index_ungapped.c .core_blast_filter.c .core_lookup_wrap.c .core_hspfilter_besthit.c .core_gencode_singleton.c .core_gapinfo.c .core_blast_psi.c .core_spliced_hits.c .core_blast_hspstream_mt_utils.c .core_blast_lookup.c .core_blast_diagnostics.c .core_blast_hspstream.c .core_blast_nascan.c .core_na_ungapped.c .core_phi_extend.c .core_blast_nalookup.c .core_blast_aalookup.c .core_blast_psi_priv.c .core_blast_encoding.c .core_jumper.c .core_blast_util.c .core_blast_posit.c .core_hspfilter_mapper.c .core_hspfilter_culling.c .core_ncbi_std.c .core_blast_program.c .core_blast_traceback.c .core_blast_stat.c .core_blast_setup.c .core_link_hsps.c .core_greedy_align.c .core_lookup_util.c .core_pattern.c .core_blast_hits.c .core_blast_kappa.c .core_blast_message.c .core_blast_parameters.c .core_matrix_freq_ratios.c .core_hspfilter_collector.c .core_aa_ungapped.c .core_blast_traceback_mt_priv.c .core_blast_aascan.c .core_phi_lookup.c .core_blast_gapalign.c .core_blast_query_info.c .core_blast_seg.c .core_split_query.c .core_blast_sw.c .core_blast_options.c .core_blast_extend.c .core_blast_tune.c @@ -71548,7 +71586,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o /bin/rm -f libxblastformat.a .libxblastformat.a.stamp ar cr libxblastformat.a blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxblastformat.a /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/format' @@ -73462,7 +73500,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/cgi/user_agent.cpp -o user_agent.o /bin/rm -f libxcgi.a .libxcgi.a.stamp ar cr libxcgi.a ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxcgi.a /bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xcgi.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/cgi' @@ -74462,7 +74500,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o /bin/rm -f libxcleanup.a .libxcleanup.a.stamp ar cr libxcleanup.a autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxcleanup.a /bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xcleanup.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/cleanup' @@ -79090,7 +79128,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o /bin/rm -f libxconnserv.a .libxconnserv.a.stamp ar cr libxconnserv.a grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxconnserv.a /bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xconnserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/services' @@ -82826,7 +82864,7 @@ /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o /bin/rm -f libxformat.a .libxformat.a.stamp ar cr libxformat.a accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxformat.a /bin/ln -f .xformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/format' @@ -83617,7 +83655,7 @@ o writer_htmlenc.o /bin/rm -f libxhtml.a .libxhtml.a.stamp ar cr libxhtml.a node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxhtml.a /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html' @@ -83776,7 +83814,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.a .libxlogging.a.stamp ar cr libxlogging.a message.o listener.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxlogging.a /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/logging' @@ -84007,7 +84045,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libxnetblast.a .libxnetblast.a.stamp ar cr libxnetblast.a blast__.o blast___.o names.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxnetblast.a /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blast' @@ -84172,7 +84210,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.a .libxnetblastcli.a.stamp ar cr libxnetblastcli.a blastclient.o blastclient_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxnetblastcli.a /bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xnetblastcli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blast' @@ -87119,7 +87157,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/edit/huge_asn_loader.cpp -o huge_asn_loader.o /bin/rm -f libxobjedit.a .libxobjedit.a.stamp ar cr libxobjedit.a gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o mla_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o huge_asn_reader.o huge_file.o huge_file_process.o huge_asn_loader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxobjedit.a /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit' @@ -92949,7 +92987,7 @@ rong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.a .libxobjread.a.stamp ar cr libxobjread.a reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxobjread.a /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers' @@ -94716,7 +94754,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.a .libxobjutil.a.stamp ar cr libxobjutil.a weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxobjutil.a /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/util' @@ -95213,7 +95251,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/qparse/parse_utils.cpp -o parse_utils.o /bin/rm -f libxqueryparse.a .libxqueryparse.a.stamp ar cr libxqueryparse.a query_parse.o parser.o query_tree_print.o query_exec.o parse_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxqueryparse.a /bin/ln -f .xqueryparse.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xqueryparse.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/qparse' @@ -95531,7 +95569,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/connection_pool.cpp -o connection_pool.o /bin/rm -f libxthrserv.a .libxthrserv.a.stamp ar cr libxthrserv.a threaded_server.o server.o server_monitor.o connection_pool.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib/libxthrserv.a /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' @@ -95541,17 +95579,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.edit_imgt_file builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/edit_imgt_file.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/makeogrdb.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrannote builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/makeogrannote.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' @@ -95755,7 +95793,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp -o igblastn_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastn_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lblast_app_util -ligblast -lblast_sra_input-static -lsraread-static -lblastinput-static -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -llmdb-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lpthread -lm -lpthread -o igblastn -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/igblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' @@ -95961,7 +95999,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp -o igblastp_app.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastp_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/lib -lblast_app_util -ligblast -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -llmdb-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lpthread -lm -lpthread -o igblastp -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/bin/igblastp make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' @@ -95973,33 +96011,33 @@ cd c\+\+ && make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3328155 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3878834 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3328155 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3878834 check_r RUN_CHECK=Y; \ fi make[2]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build' make[2]: warning: -j12 forced in submake: resetting jobserver mode. ====================================================================== make[3]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328198 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3878857 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib/test' -/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo3328198 check_add_r || exit 5 +/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo3878857 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib/jaeger' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib/jaeger' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/corelib' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' @@ -96007,15 +96045,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' SKIP -- util/regexp/test_pcre make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/regexp' -/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/xregexp' -/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3328255 check_add_r || exit 5 +/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3878893 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: @@ -96028,13 +96066,13 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3328268 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3878902 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3328255 check_add_r || exit 5 +/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3878893 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: @@ -96047,43 +96085,43 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3328301 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3878932 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3328255 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3878893 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/compress' -/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/diff' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/diff' -/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/image' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/image' -/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328378 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3878969 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/tables/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/tables/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/tables' -/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/sequtil' -/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/bitset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96091,12 +96129,12 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/bitset' -/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/qparse' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/qparse' -/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdb' @@ -96120,7 +96158,7 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdb' TEST -- util/lmdb/lmdb_test5 make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdb' -/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdbxx' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdbxx' @@ -96128,77 +96166,77 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/lmdbxx' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/demo' -/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo3328214 check_add_r || exit 5 +/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo3878869 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/util' -/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3328742 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3879243 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328746 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879247 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/services/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/services/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/services' -/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo3328742 check_add_r || exit 5 +/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo3879243 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/ext' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328742 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879243 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/test' -/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo3328742 check_add_r || exit 5 +/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo3879243 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/daemons' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect/daemons' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/connect' -/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/cgi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328768 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879267 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/cgi/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/cgi/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/cgi' -/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328793 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879275 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3328793 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3879275 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html/demo' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/html' -/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo3328810 check_add_r || exit 5 +/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo3879287 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' @@ -96206,14 +96244,14 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo3328810 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo3879287 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo3328853 check_add_r || exit 5 +/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo3879307 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: @@ -96226,7 +96264,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo3328877 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo3879328 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' @@ -96234,10 +96272,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system/project_tree_builder' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/build-system' -/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo3328913 check_add_r || exit 5 +/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo3879353 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' @@ -96245,26 +96283,26 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' TEST -- serial/datatool/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/datatool' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3328913 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879353 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/test' -/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo3328913 check_add_r || exit 5 +/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo3879353 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/soap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/soap' -/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo3328913 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo3879353 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/grpc_integration' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial/grpc_integration' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/serial' -/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/db' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo3329044 check_add_r || exit 5 +/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo3879426 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -96272,38 +96310,38 @@ /bin/echo 'Warning: non-existent sub-project "bdb"' Warning: non-existent sub-project "bdb" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/db' -/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo3329067 check_add_r || exit 5 +/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo3879435 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/util' -/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ctlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ctlib' -/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ftds100' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ftds100' -/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ftds-default' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/ftds-default' -/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/mysql' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/mysql' -/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project odbc due to unmet requirements: @@ -96316,7 +96354,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3329158 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3879468 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' @@ -96324,7 +96362,7 @@ Warning: non-existent sub-project "samples" make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo3329080 check_add_r || exit 5 +/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo3879439 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi/driver/samples' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96337,272 +96375,272 @@ /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/dbapi' -/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329241 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879505 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329241 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879505 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/general' -/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/biblio' -/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medline' -/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pub' -/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqcode' -/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329287 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879533 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329287 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879533 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seq' -/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329299 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879545 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqset/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqset/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqset' -/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/submit' -/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqedit' -/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqsplit' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329319 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879565 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id1/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id1/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id1' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/id2' -/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/entrez2' -/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pubmed' -/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/medlars' -/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mla' -/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/proj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/proj' -/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/scoremat' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blast' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastdb' -/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml' -/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/blastxml2' -/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mmdb' -/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/cn3d' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/cn3d' -/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/cdd' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/cdd' -/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/ncbimime' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcsubstance' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcsubstance' -/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcassay' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcassay' -/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcassay2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/pcassay2' -/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/gbseq' -/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/insdseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/insdseq' -/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/tinyseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/tinyseq' -/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/biotree' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/biotree' -/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/entrezgene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/entrezgene' -/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/omssa' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/omssa' -/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/remap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/remap' -/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqtest' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/seqtest' -/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon1' -/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/taxon3' -/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/gbproj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/gbproj' -/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/trackmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/trackmgr' -/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/valerr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/valerr' -/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/valid' -/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/access' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/access' -/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/docsum' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/docsum' -/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/featdef' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/featdef' -/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3329535 check_add_r || exit 5 +/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3879716 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll/gc_cli' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll/gc_cli' @@ -96611,69 +96649,69 @@ SKIP -- objects/genomecoll/gc_cli/gc_cli (unmet build REQUIRES) make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll/gc_cli' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genomecoll' -/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/homologene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/homologene' -/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mim' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/mim' -/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/objprt' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/objprt' -/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation' -/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/macro' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/macro' -/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genesbyloc' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/genesbyloc' -/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/coords' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/coords' -/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/varrep' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/varrep' -/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3329603 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3879760 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo3329608 check_add_r || exit 5 +/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo3879764 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo3329608 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo3879764 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/variation_libs' -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3329236 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3879501 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/dbsnp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo3329621 check_add_r || exit 5 +/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo3879776 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/dbsnp/primary_track' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96681,65 +96719,65 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/dbsnp/primary_track' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects/dbsnp' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objects' -/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329634 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879785 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/test' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3329634 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3879785 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329642 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879793 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/util/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/util/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/util' -/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo3329634 check_add_r || exit 5 +/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo3879785 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr/split' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objmgr' -/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3329663 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3879814 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/app' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/app' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329663 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879814 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329663 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879814 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/readers' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3329683 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3879830 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3329689 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3879834 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' @@ -96747,7 +96785,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329689 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879834 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/test' @@ -96756,10 +96794,10 @@ TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo3329683 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo3879830 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_writer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329807 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879929 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96770,10 +96808,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3329683 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3879830 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3329820 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3879942 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' @@ -96781,7 +96819,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329820 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879942 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96794,10 +96832,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3329683 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3879830 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329862 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879972 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96808,10 +96846,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3329683 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3879830 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/blastdb_format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329889 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3879985 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast/blastdb_format/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96825,18 +96863,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo3329934 check_add_r || exit 5 +/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo3879999 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/diag' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/diag' -/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo3329934 check_add_r || exit 5 +/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo3879999 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329962 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880007 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' @@ -96845,10 +96883,10 @@ SKIP -- objtools/pubseq_gateway/cassandra/test/psg_cassandra_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' -/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo3329934 check_add_r || exit 5 +/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo3879999 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3329995 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880018 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client/test' @@ -96857,7 +96895,7 @@ SKIP -- objtools/pubseq_gateway/client/test/test_psg_client_impl (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/client' -/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo3329934 check_add_r || exit 5 +/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo3879999 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project protobuf due to unmet requirements: @@ -96877,10 +96915,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3329934 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3879999 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330028 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880043 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' @@ -96894,43 +96932,43 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo3330061 check_add_r || exit 5 +/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo3880061 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/cache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/cache' -/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id1' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/id1' -/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' -/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330072 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880065 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96938,10 +96976,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3330061 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3880061 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330118 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880098 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders/blastdb/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96954,20 +96992,20 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/data_loaders' -/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/simple' -/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3330143 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3880113 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/alnmgr/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/alnmgr/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330143 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880113 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/alnmgr/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96979,63 +97017,63 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/egquery' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/egquery' -/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/elink' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/elink' -/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/epost' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/epost' -/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esearch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esearch' -/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/espell' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/espell' -/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esummary' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/esummary' -/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/linkout' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/linkout' -/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/einfo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/uilist' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/ehistory' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330231 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880172 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch/test' @@ -97044,41 +97082,41 @@ TEST -- objtools/eutils/efetch/test/test_pubmed_article make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/efetch' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3330166 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3880128 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/eutils' -/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330359 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880264 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/unit_test' -/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3330359 check_add_r || exit 5 +/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3880264 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/pubmed_fetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/pubmed_fetch' -/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo3330359 check_add_r || exit 5 +/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo3880264 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/test_remote_updater' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit/test_remote_updater' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/edit' -/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330385 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880280 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/cleanup/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/cleanup/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/cleanup' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -97089,19 +97127,19 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330403 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880295 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3329654 check_add_r || exit 5 +/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3879805 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330411 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880303 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools/align_format/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -97127,16 +97165,16 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3330440 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3880323 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3330444 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3880327 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers/sra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330451 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880331 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers/sra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra/readers/sra/test' @@ -97181,50 +97219,50 @@ /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/sra' -/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3330911 check_add_r || exit 5 +/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3880638 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/dustmask' -/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3330911 check_add_r || exit 5 +/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3880638 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/winmask' -/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo3330911 check_add_r || exit 5 +/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo3880638 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3330939 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3880650 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3330939 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880650 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/sequence' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3330911 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3880638 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/composition_adjustment' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/core' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/core' -/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/dbindex' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3330991 check_add_r || exit 5 +/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3880674 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/dbindex/makeindex' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/dbindex/makeindex' @@ -97235,15 +97273,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/api' -/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3331021 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880699 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' @@ -97252,29 +97290,29 @@ SKIP -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/proteinkmer' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/format' -/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3331036 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880714 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput/unit_test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3331036 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3880714 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput/demo' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blastinput' -/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3331049 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880726 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' @@ -97283,7 +97321,7 @@ SKIP -- algo/blast/blast_sra_input/unit_test/blastsrainput_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/blast_sra_input' -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3330968 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3880662 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast/igblast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -97297,18 +97335,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/blast' /bin/echo 'Warning: non-existent sub-project "segmask"' Warning: non-existent sub-project "segmask" -/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo3330911 check_add_r || exit 5 +/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo3880638 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3331076 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3880745 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3331080 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3880749 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align/util/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align/util/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3331080 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880749 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo/align/util/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -97350,15 +97388,15 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/algo' -/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo3331118 check_add_r || exit 5 +/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo3880778 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/third_party' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/third_party' -/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo3331118 check_add_r || exit 5 +/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo3880778 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/third_party_static' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: @@ -97386,10 +97424,10 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo3331118 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo3880778 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/jsonwrapp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3331153 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3880804 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/jsonwrapp/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc/jsonwrapp/test' @@ -97411,7 +97449,7 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3328194 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3878853 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app' make[4]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' @@ -97428,7 +97466,7 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3331179 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3880821 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blast' @@ -97494,7 +97532,7 @@ Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3331179 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3880821 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/igblast' @@ -97512,7 +97550,7 @@ Warning: non-existent sub-project "dustmasker" /bin/echo 'Warning: non-existent sub-project "segmasker"' Warning: non-existent sub-project "segmasker" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3331179 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3880821 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1430-DebugOptMT64/build/app/blastdb' @@ -97657,7 +97695,7 @@ ABS -- [util/lmdb] lmdb_test.sh 3 ABS -- [util/lmdb] lmdb_test.sh 4 ABS -- [util/lmdb] lmdb_test.sh 5 -OK -- [serial/datatool] datatool.sh (real 0.45, user 0.19, sys 0.03) +OK -- [serial/datatool] datatool.sh (real 0.55, user 0.35, sys 0.22) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_mt ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_st @@ -97729,8 +97767,8 @@ dpkg-gencontrol: warning: package igblast: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -O--sourcedirectory=c\+\+ dh_builddeb -O--sourcedirectory=c\+\+ -dpkg-deb: building package 'igblast' in '../igblast_1.20.0-2_arm64.deb'. dpkg-deb: building package 'igblast-dbgsym' in '../igblast-dbgsym_1.20.0-2_arm64.deb'. +dpkg-deb: building package 'igblast' in '../igblast_1.20.0-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-igblast_1.20.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-igblast_1.20.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -97738,12 +97776,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3580227/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2866456 and its subdirectories -I: Current time: Sat Oct 3 00:40:03 -12 2026 -I: pbuilder-time-stamp: 1791031203 +I: removing directory /srv/workspace/pbuilder/3580227 and its subdirectories +I: Current time: Sun Aug 31 21:56:12 +14 2025 +I: pbuilder-time-stamp: 1756626972