Diff of the two buildlogs: -- --- b1/build.log 2025-10-09 20:37:46.385702876 +0000 +++ b2/build.log 2025-10-09 22:12:01.463492676 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Oct 9 06:58:29 -12 2025 -I: pbuilder-time-stamp: 1760036309 +I: Current time: Thu Nov 12 17:01:40 +14 2026 +I: pbuilder-time-stamp: 1794452500 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -25,53 +25,85 @@ dpkg-source: info: applying d52aea6f5599e85a0535c3f8a344aed2fa8a7e22.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2248343/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 12 03:01 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='edfc6b84b9b34cc5a2c2a3d10e8c5872' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2248343' - PS1='# ' - PS2='> ' + INVOCATION_ID=1e9fdcd7b62f431388486be08d078eba + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2714501 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wRnJGMuV/pbuilderrc_gJdO --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wRnJGMuV/b1 --logfile b1/build.log ncbi-igblast_1.20.0-3.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wRnJGMuV/pbuilderrc_JXPq --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wRnJGMuV/b2 --logfile b2/build.log ncbi-igblast_1.20.0-3.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2248343/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -169,7 +201,7 @@ Get: 48 http://deb.debian.org/debian forky/main arm64 libncbi-wvdb-dev arm64 3.2.1+dfsg-2 [1269 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libncbi-vdb-dev arm64 3.2.1+dfsg-2 [1572 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 time arm64 1.9-0.3 [48.0 kB] -Fetched 20.1 MB in 0s (182 MB/s) +Fetched 20.1 MB in 0s (132 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20000 files and directories currently installed.) @@ -384,7 +416,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-3_source.changes +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-3_source.changes dpkg-buildpackage: info: source package ncbi-igblast dpkg-buildpackage: info: source version 1.20.0-3 dpkg-buildpackage: info: source distribution unstable @@ -412,74 +448,74 @@ done ) ; \ ) ; \ done -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: 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file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory make[1]: [debian/rules:40: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile c++/GCC* rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -987,7 +1023,7 @@ checking for libungif... no checking for libXpm... no checking for freetype-config... no -./src/build-system/configure: line 29815: cd: /nonexistent/first-build: No such file or directory +/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/configure: line 29815: cd: /nonexistent/second-build: No such file or directory checking for libftgl... no checking for libmagic... no checking for libmimetic... no @@ -1274,7 +1310,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c. gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DNCBI_APP_BUILT_AS=run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o gcc -Wl,-z,relro run_with_lock.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -o run_with_lock -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/run_with_lock make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' @@ -5531,7 +5567,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/ncbi_pool_balancer.cpp -o ncbi_pool_balancer.o /bin/rm -f libxncbi.a .libxncbi.a.stamp ar cr libxncbi.a ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o ncbi_fast.o ncbi_dbsvcmapper.o ncbi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxncbi.a /bin/ln -f .xncbi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xncbi.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' @@ -5722,7 +5758,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.a .libtest_mt.a.stamp ar cr libtest_mt.a test_mt.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtest_mt.a /bin/ln -f .test_mt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.test_mt.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' @@ -8939,7 +8975,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/crc32_sse.cpp -o crc32_sse.o /bin/rm -f libxutil.a .libxutil.a.stamp ar cr libxutil.a random_gen.o utf8.o checksum.o checksum_cityhash.o checksum_farmhash.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o cache_async.o multipattern_search.o crc32_sse.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxutil.a /bin/ln -f .xutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xutil.dep make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' @@ -9014,7 +9050,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -DHAVE_CONFIG_H -DPCRE_NO_UTF16 -DPCRE_NO_UTF32 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcreposix.c -o pcreposix.o /bin/rm -f libregexp.a .libregexp.a.stamp ar cr libregexp.a pcre_byte_order.o pcre_chartables.o pcre_compile.o pcre_config.o pcre_dfa_exec.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_string_utils.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o pcreposix.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libregexp.a /bin/ln -f .regexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.regexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -9025,7 +9061,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcretest.c -o pcretest.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcre_printint.c -o pcre_printint.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 pcretest.o pcre_printint.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lregexp -o test_pcre -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/test_pcre make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -9329,7 +9365,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/convert_dates_iso8601.cpp -o convert_dates_iso8601.o /bin/rm -f libxregexp.a .libxregexp.a.stamp ar cr libxregexp.a regexp.o arg_regexp.o mask_regexp.o convert_dates_iso8601.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxregexp.a /bin/ln -f .xregexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xregexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' @@ -9408,7 +9444,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o /bin/rm -f libxregexp_template_tester.a .libxregexp_template_tester.a.stamp ar cr libxregexp_template_tester.a regexp_template_tester.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxregexp_template_tester.a /bin/ln -f .xregexp_template_tester.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xregexp_template_tester.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' @@ -13973,7 +14009,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lxutil -lxncbi -lxregexp -lregexp -lm -lpthread -o project_tree_builder -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/project_tree_builder make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' @@ -17540,7 +17576,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/rpcbase.cpp -o rpcbase.o /bin/rm -f libxser.a .libxser.a.stamp ar cr libxser.a hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxser.a /bin/ln -f .xser.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' @@ -21994,7 +22030,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' @@ -22088,7 +22124,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/new_module.sh gencoll_client all Waiting for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock. -Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 3250524 (make_asn) +Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 3007138 (make_asn) /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++ builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build DATATOOL=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool -oR /build/reproducible-path/ncbi-igblast-1.20.0/c++ \ @@ -23295,7 +23331,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.a .libalign_format.a.stamp ar cr libalign_format.a format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libalign_format.a /bin/ln -f .align_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.align_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format' @@ -23524,7 +23560,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /bin/rm -f libbiblio.a .libbiblio.a.stamp ar cr libbiblio.a biblio__.o biblio___.o citation_base.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libbiblio.a /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' @@ -23534,22 +23570,22 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -23686,7 +23722,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -23786,7 +23822,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /bin/rm -f libblast_services.a .libblast_services.a.stamp ar cr libblast_services.a blast_services.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_services.a /bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_services.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' @@ -23882,7 +23918,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blast_sra_input/blast_sra_input.cpp -o blast_sra_input.o /bin/rm -f libblast_sra_input.a .libblast_sra_input.a.stamp ar cr libblast_sra_input.a blast_sra_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_sra_input.a /bin/ln -f .blast_sra_input.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_sra_input.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' @@ -24042,7 +24078,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.a .libblastdb.a.stamp ar cr libblastdb.a blastdb__.o blastdb___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastdb.a /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' @@ -24409,7 +24445,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o /bin/rm -f libblastdb_format.a .libblastdb_format.a.stamp ar cr libblastdb_format.a seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastdb_format.a /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format' @@ -26156,7 +26192,7 @@ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o /bin/rm -f libblastinput.a .libblastinput.a.stamp ar cr libblastinput.a blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastinput.a /bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastinput.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' @@ -26339,7 +26375,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /bin/rm -f libblastxml.a .libblastxml.a.stamp ar cr libblastxml.a blastxml__.o blastxml___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastxml.a /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' @@ -26522,7 +26558,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libblastxml2.a .libblastxml2.a.stamp ar cr libblastxml2.a blastxml2__.o blastxml2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastxml2.a /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' @@ -26561,7 +26597,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.a .libcomposition_adjustment.a.stamp ar cr libcomposition_adjustment.a compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libcomposition_adjustment.a /bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.composition_adjustment.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' @@ -28425,12 +28461,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/dbapi_pool_balancer.cpp -o dbapi_pool_balancer.o /bin/rm -f libdbapi_driver.a .libdbapi_driver.a.stamp ar cr libdbapi_driver.a handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libdbapi_driver.a /bin/ln -f .dbapi_driver.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.dbapi_driver.dep /bin/rm -f libdbapi_driver-dll.so .libdbapi_driver-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libdbapi_driver-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libdbapi_driver-dll.so /bin/ln -f .dbapi_driver-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.dbapi_driver-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver' @@ -28642,7 +28678,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o /bin/rm -f libefetch.a .libefetch.a.stamp ar cr libefetch.a efetch__.o efetch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libefetch.a /bin/ln -f .efetch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.efetch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' @@ -28825,7 +28861,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o /bin/rm -f libegquery.a .libegquery.a.stamp ar cr libegquery.a egquery__.o egquery___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libegquery.a /bin/ln -f .egquery.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.egquery.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' @@ -29008,7 +29044,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o /bin/rm -f libehistory.a .libehistory.a.stamp ar cr libehistory.a ehistory__.o ehistory___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libehistory.a /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' @@ -29191,7 +29227,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o /bin/rm -f libeinfo.a .libeinfo.a.stamp ar cr libeinfo.a einfo__.o einfo___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libeinfo.a /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' @@ -29374,7 +29410,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o /bin/rm -f libelink.a .libelink.a.stamp ar cr libelink.a elink__.o elink___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libelink.a /bin/ln -f .elink.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' @@ -29557,7 +29593,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/epost/epost___.cpp -o epost___.o /bin/rm -f libepost.a .libepost.a.stamp ar cr libepost.a epost__.o epost___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libepost.a /bin/ln -f .epost.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' @@ -29740,7 +29776,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o /bin/rm -f libesearch.a .libesearch.a.stamp ar cr libesearch.a esearch__.o esearch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libesearch.a /bin/ln -f .esearch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.esearch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' @@ -29923,7 +29959,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o /bin/rm -f libespell.a .libespell.a.stamp ar cr libespell.a espell__.o espell___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libespell.a /bin/ln -f .espell.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.espell.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' @@ -30107,7 +30143,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o /bin/rm -f libesummary.a .libesummary.a.stamp ar cr libesummary.a esummary__.o esummary___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libesummary.a /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' @@ -30914,7 +30950,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o /bin/rm -f libeutils.a .libeutils.a.stamp ar cr libeutils.a eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libeutils.a /bin/ln -f .eutils.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.eutils.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' @@ -31096,7 +31132,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/rm -f libgbseq.a .libgbseq.a.stamp ar cr libgbseq.a gbseq__.o gbseq___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgbseq.a /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' @@ -31322,7 +31358,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o /bin/rm -f libgene_info.a .libgene_info.a.stamp ar cr libgene_info.a gene_info.o gene_info_reader.o file_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgene_info.a /bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.gene_info.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' @@ -31576,7 +31612,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgeneral.a .libgeneral.a.stamp ar cr libgeneral.a general__.o general___.o uoconv.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgeneral.a /bin/ln -f .general.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.general.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' @@ -31743,7 +31779,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.a .libgenome_collection.a.stamp ar cr libgenome_collection.a genome_collection__.o genome_collection___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgenome_collection.a /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' @@ -31903,7 +31939,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id1/id1___.cpp -o id1___.o /bin/rm -f libid1.a .libid1.a.stamp ar cr libid1.a id1__.o id1___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libid1.a /bin/ln -f .id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' @@ -32063,7 +32099,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.a .libid2.a.stamp ar cr libid2.a id2__.o id2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libid2.a /bin/ln -f .id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.id2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' @@ -32166,7 +32202,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.a .libigblast.a.stamp ar cr libigblast.a igblast.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libigblast.a /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/igblast' @@ -32348,7 +32384,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /bin/rm -f libmedlars.a .libmedlars.a.stamp ar cr libmedlars.a medlars__.o medlars___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmedlars.a /bin/ln -f .medlars.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.medlars.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' @@ -32508,7 +32544,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.a .libmedline.a.stamp ar cr libmedline.a medline__.o medline___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmedline.a /bin/ln -f .medline.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' @@ -32697,7 +32733,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla___.cpp -o mla___.o /bin/rm -f libmla.a .libmla.a.stamp ar cr libmla.a mla__.o mla___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmla.a /bin/ln -f .mla.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' @@ -32862,7 +32898,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.a .libmlacli.a.stamp ar cr libmlacli.a mla_client.o mla_client_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmlacli.a /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' @@ -33126,7 +33162,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.a .libncbi_xloader_blastdb.a.stamp ar cr libncbi_xloader_blastdb.a bdbloader.o cached_sequence.o local_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_blastdb.a /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33292,7 +33328,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb_rmt.a .libncbi_xloader_blastdb_rmt.a.stamp ar cr libncbi_xloader_blastdb_rmt.a bdbloader_rmt.o remote_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_blastdb_rmt.a /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33452,7 +33488,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpub.a .libpub.a.stamp ar cr libpub.a pub__.o pub___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpub.a /bin/ln -f .pub.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' @@ -35381,7 +35417,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.a .libseq.a.stamp ar cr libseq.a seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseq.a /bin/ln -f .seq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' @@ -35541,7 +35577,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /bin/rm -f libseqcode.a .libseqcode.a.stamp ar cr libseqcode.a seqcode__.o seqcode___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqcode.a /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' @@ -35701,7 +35737,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.a .libseqedit.a.stamp ar cr libseqedit.a seqedit__.o seqedit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqedit.a /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' @@ -35943,7 +35979,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /bin/rm -f libseqset.a .libseqset.a.stamp ar cr libseqset.a seqset__.o seqset___.o gb_release_file.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqset.a /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' @@ -36103,7 +36139,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.a .libseqsplit.a.stamp ar cr libseqsplit.a seqsplit__.o seqsplit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqsplit.a /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' @@ -36534,7 +36570,7 @@ u++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.a .libsequtil.a.stamp ar cr libsequtil.a sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsequtil.a /bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sequtil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' @@ -36694,7 +36730,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/submit/submit___.cpp -o submit___.o /bin/rm -f libsubmit.a .libsubmit.a.stamp ar cr libsubmit.a submit__.o submit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsubmit.a /bin/ln -f .submit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' @@ -37634,7 +37670,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /bin/rm -f libxcompress.a .libxcompress.a.stamp ar cr libxcompress.a compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcompress.a /bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcompress.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' @@ -39540,7 +39576,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls/ssl_tls13_keys.c -o mbedtls/ssl_tls13_keys.o /bin/rm -f libxconnect.a .libxconnect.a.stamp ar cr libxconnect.a ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_dispd.o ncbi_lbos.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/aria.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/chacha20.o mbedtls/chachapoly.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/constant_time.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hkdf.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/memory_buffer_alloc.o mbedtls/mps_reader.o mbedtls/mps_trace.o mbedtls/nist_kw.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/platform_util.o mbedtls/poly1305.o mbedtls/psa_crypto.o mbedtls/psa_crypto_aead.o mbedtls/psa_crypto_cipher.o mbedtls/psa_crypto_client.o mbedtls/psa_crypto_driver_wrappers.o mbedtls/psa_crypto_ecp.o mbedtls/psa_crypto_hash.o mbedtls/psa_crypto_mac.o mbedtls/psa_crypto_rsa.o mbedtls/psa_crypto_se.o mbedtls/psa_crypto_slot_management.o mbedtls/psa_crypto_storage.o mbedtls/psa_its_file.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/rsa_internal.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_msg.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o mbedtls/ssl_tls13_keys.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxconnect.a /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' @@ -45633,7 +45669,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.a .libxobjmgr.a.stamp ar cr libxobjmgr.a seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjmgr.a /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' @@ -46796,12 +46832,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader.a /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader.dep /bin/rm -f libncbi_xreader-dll.so .libncbi_xreader-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader-dll.so /bin/ln -f .ncbi_xreader-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47436,12 +47472,12 @@ _loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_genbank.dep /bin/rm -f libncbi_xloader_genbank-dll.so .libncbi_xloader_genbank-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_genbank-dll.so /bin/ln -f .ncbi_xloader_genbank-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_genbank-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47635,12 +47671,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_cache.a /bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_cache.dep /bin/rm -f libncbi_xreader_cache-dll.so .libncbi_xreader_cache-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_cache-dll.so /bin/ln -f .ncbi_xreader_cache-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_cache-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' @@ -47755,12 +47791,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp ar cr libncbi_xreader_id1.a reader_id1.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id1.a /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id1.dep /bin/rm -f libncbi_xreader_id1-dll.so .libncbi_xreader_id1-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id1.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id1-dll.so /bin/ln -f .ncbi_xreader_id1-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id1-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' @@ -47874,12 +47910,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp ar cr libncbi_xreader_id2.a reader_id2.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id2.a /bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id2.dep /bin/rm -f libncbi_xreader_id2-dll.so .libncbi_xreader_id2-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id2.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id2-dll.so /bin/ln -f .ncbi_xreader_id2-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id2-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' @@ -48751,7 +48787,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.a .libproteinkmer.a.stamp ar cr libproteinkmer.a blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libproteinkmer.a /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' @@ -48912,7 +48948,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.a .libpsg_client.a.stamp ar cr libpsg_client.a psg_client.o psg_client_transport.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpsg_client.a /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' @@ -49072,7 +49108,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o /bin/rm -f libpubmed.a .libpubmed.a.stamp ar cr libpubmed.a pubmed__.o pubmed___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpubmed.a /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' @@ -49242,7 +49278,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.a .libscoremat.a.stamp ar cr libscoremat.a scoremat__.o scoremat___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libscoremat.a /bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.scoremat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' @@ -51004,7 +51040,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /bin/rm -f libseqdb.a .libseqdb.a.stamp ar cr libseqdb.a seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqdb.a /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' @@ -51732,7 +51768,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /bin/rm -f libseqmasks_io.a .libseqmasks_io.a.stamp ar cr libseqmasks_io.a mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqmasks_io.a /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' @@ -52440,13 +52476,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/sra/readers/sra/snpread.cpp -o snpread.o /bin/rm -f libsraread.a .libsraread.a.stamp ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsraread.a /bin/ln -f .sraread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sraread.dep /bin/rm -f libsraread-dll.so .libsraread-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libsraread-dll.so -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread : libsraread-dll.so -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsraread-dll.so /bin/ln -f .sraread-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sraread-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra' @@ -52473,7 +52509,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.a .libtables.a.stamp ar cr libtables.a raw_scoremat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtables.a /bin/ln -f .tables.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.tables.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' @@ -52964,7 +53000,7 @@ roducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.a .libtaxon1.a.stamp ar cr libtaxon1.a taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtaxon1.a /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' @@ -53219,7 +53255,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o /bin/rm -f libtaxon3.a .libtaxon3.a.stamp ar cr libtaxon3.a taxon3__.o taxon3___.o taxon3.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtaxon3.a /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' @@ -53379,7 +53415,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o /bin/rm -f libuilist.a .libuilist.a.stamp ar cr libuilist.a uilist__.o uilist___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libuilist.a /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' @@ -53471,7 +53507,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/profile/rtprofile.cpp -o rtprofile.o /bin/rm -f libutrtprof.a .libutrtprof.a.stamp ar cr libutrtprof.a rtprofile.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libutrtprof.a /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' @@ -53657,7 +53693,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.a .libvalid.a.stamp ar cr libvalid.a valid__.o valid___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libvalid.a /bin/ln -f .valid.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.valid.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' @@ -53817,7 +53853,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.a .libvariation.a.stamp ar cr libvariation.a variation__.o variation___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libvariation.a /bin/ln -f .variation.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' @@ -54965,7 +55001,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/align/util/best_placement.cpp -o best_placement.o /bin/rm -f libxalgoalignutil.a .libxalgoalignutil.a.stamp ar cr libxalgoalignutil.a align_shadow.o blast_tabular.o score_builder.o score_lookup.o align_filter.o genomic_compart.o patch_sequence.o align_compare.o align_sort.o depth_filter.o tabular_fmt.o collection_score.o named_collection_score_impl.o best_placement.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoalignutil.a /bin/ln -f .xalgoalignutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoalignutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util' @@ -55402,7 +55438,7 @@ ex_search.o /bin/rm -f libxalgoblastdbindex.a .libxalgoblastdbindex.a.stamp ar cr libxalgoblastdbindex.a sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoblastdbindex.a /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' @@ -55502,7 +55538,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.a .libxalgodustmask.a.stamp ar cr libxalgodustmask.a symdust.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgodustmask.a /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' @@ -57398,7 +57434,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/sequence/micro_introns.cpp -o micro_introns.o /bin/rm -f libxalgoseq.a .libxalgoseq.a.stamp ar cr libxalgoseq.a adapter_search.o cpg.o nuc_prop.o orf.o prot_prop.o regexp_loc.o seq_match.o restriction.o antigenic.o coiled_coil.o signal_seq.o make_cdr_prods.o find_pattern.o gene_model.o project_exons.o transform_align.o annot_compare.o compare_feats.o align_group.o masking_delta.o align_cleanup.o util.o gap_analysis.o internal_stops.o micro_introns.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoseq.a /bin/ln -f .xalgoseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' @@ -61692,7 +61728,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.a .libxalgowinmask.a.stamp ar cr libxalgowinmask.a seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgowinmask.a /bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgowinmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' @@ -63592,7 +63628,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o /bin/rm -f libxalnmgr.a .libxalnmgr.a.stamp ar cr libxalnmgr.a aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalnmgr.a /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr' @@ -70442,7 +70478,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.a .libxblast.a.stamp ar cr libxblast.a .core_aa_ungapped.o .core_blast_diagnostics.o .core_blast_engine.o .core_blast_extend.o .core_blast_filter.o .core_blast_gapalign.o .core_blast_hits.o .core_blast_hspstream.o .core_blast_itree.o .core_blast_kappa.o .core_blast_lookup.o .core_blast_aalookup.o .core_blast_aascan.o .core_blast_nalookup.o .core_blast_nascan.o .core_blast_message.o .core_blast_options.o .core_blast_psi.o .core_na_ungapped.o .core_blast_psi_priv.o .core_blast_seg.o .core_blast_seqsrc.o .core_blast_setup.o .core_blast_stat.o .core_blast_traceback.o .core_blast_util.o .core_gapinfo.o .core_greedy_align.o .core_hspfilter_collector.o .core_hspfilter_besthit.o .core_hspfilter_culling.o .core_link_hsps.o .core_lookup_util.o .core_lookup_wrap.o .core_matrix_freq_ratios.o .core_ncbi_std.o .core_ncbi_math.o .core_blast_encoding.o .core_pattern.o .core_phi_extend.o .core_phi_gapalign.o .core_phi_lookup.o .core_blast_parameters.o .core_blast_posit.o .core_blast_program.o .core_blast_query_info.o .core_blast_tune.o .core_blast_sw.o .core_blast_dynarray.o .core_split_query.o .core_gencode_singleton.o .core_index_ungapped.o .core_blast_traceback_mt_priv.o .core_blast_hspstream_mt_utils.o .core_boost_erf.o .core_jumper.o .core_hspfilter_mapper.o .core_spliced_hits.o blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxblast.a /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xblast.dep rm .core_phi_gapalign.c .core_blast_dynarray.c .core_boost_erf.c .core_blast_itree.c .core_blast_seqsrc.c .core_blast_engine.c .core_ncbi_math.c .core_index_ungapped.c .core_blast_filter.c .core_lookup_wrap.c .core_hspfilter_besthit.c .core_gapinfo.c .core_gencode_singleton.c .core_blast_psi.c .core_spliced_hits.c .core_blast_hspstream_mt_utils.c .core_blast_diagnostics.c .core_blast_hspstream.c .core_blast_lookup.c .core_blast_nascan.c .core_na_ungapped.c .core_blast_nalookup.c .core_phi_extend.c .core_blast_aalookup.c .core_blast_psi_priv.c .core_blast_encoding.c .core_jumper.c .core_blast_util.c .core_blast_posit.c .core_hspfilter_mapper.c .core_hspfilter_culling.c .core_blast_program.c .core_ncbi_std.c .core_blast_traceback.c .core_blast_stat.c .core_blast_setup.c .core_link_hsps.c .core_greedy_align.c .core_pattern.c .core_lookup_util.c .core_blast_hits.c .core_blast_kappa.c .core_blast_message.c .core_blast_parameters.c .core_matrix_freq_ratios.c .core_hspfilter_collector.c .core_aa_ungapped.c .core_blast_traceback_mt_priv.c .core_blast_aascan.c .core_phi_lookup.c .core_blast_gapalign.c .core_blast_query_info.c .core_blast_seg.c .core_split_query.c .core_blast_sw.c .core_blast_options.c .core_blast_tune.c .core_blast_extend.c @@ -71497,7 +71533,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o /bin/rm -f libxblastformat.a .libxblastformat.a.stamp ar cr libxblastformat.a blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxblastformat.a /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' @@ -73411,7 +73447,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/cgi/user_agent.cpp -o user_agent.o /bin/rm -f libxcgi.a .libxcgi.a.stamp ar cr libxcgi.a ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcgi.a /bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcgi.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' @@ -74411,7 +74447,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o /bin/rm -f libxcleanup.a .libxcleanup.a.stamp ar cr libxcleanup.a autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcleanup.a /bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcleanup.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' @@ -79039,7 +79075,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o /bin/rm -f libxconnserv.a .libxconnserv.a.stamp ar cr libxconnserv.a grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxconnserv.a /bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xconnserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' @@ -82760,7 +82796,7 @@ /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o /bin/rm -f libxformat.a .libxformat.a.stamp ar cr libxformat.a accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxformat.a /bin/ln -f .xformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/format' @@ -83551,7 +83587,7 @@ o writer_htmlenc.o /bin/rm -f libxhtml.a .libxhtml.a.stamp ar cr libxhtml.a node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxhtml.a /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' @@ -83710,7 +83746,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.a .libxlogging.a.stamp ar cr libxlogging.a message.o listener.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxlogging.a /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' @@ -83941,7 +83977,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libxnetblast.a .libxnetblast.a.stamp ar cr libxnetblast.a blast__.o blast___.o names.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxnetblast.a /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' @@ -84106,7 +84142,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.a .libxnetblastcli.a.stamp ar cr libxnetblastcli.a blastclient.o blastclient_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxnetblastcli.a /bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xnetblastcli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' @@ -84995,18 +85031,18 @@ /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/serial/objhook.hpp:614:9: note: remove the '< >' In file included from /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/struc_comm_field.hpp:39, from /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/edit/struc_comm_field.cpp:47: -/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/field_handler.hpp:64:20: warning: 'virtual std::string ncbi::objects::edit::CFieldHandler::IsValid(const std::string&)' was hidden [-Woverloaded-virtual=] - 64 | virtual string IsValid(const string& /*value*/) { return string(); } - | ^~~~~~~ -/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/struc_comm_field.hpp:89:17: note: by 'static bool ncbi::objects::edit::CStructuredCommentField::IsValid(const ncbi::objects::CUser_object&, const std::string&)' - 89 | static bool IsValid(const CUser_object& obj, const string& desired_prefix); - | ^~~~~~~ /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/field_handler.hpp:65:28: warning: 'virtual std::vector > ncbi::objects::edit::CFieldHandler::IsValid(const std::vector >&)' was hidden [-Woverloaded-virtual=] 65 | virtual vector IsValid(const vector& /*values*/) { return vector(); } | ^~~~~~~ /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/struc_comm_field.hpp:89:17: note: by 'static bool ncbi::objects::edit::CStructuredCommentField::IsValid(const ncbi::objects::CUser_object&, const std::string&)' 89 | static bool IsValid(const CUser_object& obj, const string& desired_prefix); | ^~~~~~~ +/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/field_handler.hpp:64:20: warning: 'virtual std::string ncbi::objects::edit::CFieldHandler::IsValid(const std::string&)' was hidden [-Woverloaded-virtual=] + 64 | virtual string IsValid(const string& /*value*/) { return string(); } + | ^~~~~~~ +/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/objtools/edit/struc_comm_field.hpp:89:17: note: by 'static bool ncbi::objects::edit::CStructuredCommentField::IsValid(const ncbi::objects::CUser_object&, const std::string&)' + 89 | static bool IsValid(const CUser_object& obj, const string& desired_prefix); + | ^~~~~~~ In file included from /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/corelib/tempstr.hpp:38, from /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/corelib/ncbistr.hpp:39, from /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/corelib/ncbistd.hpp:37, @@ -87067,7 +87103,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/edit/huge_asn_loader.cpp -o huge_asn_loader.o /bin/rm -f libxobjedit.a .libxobjedit.a.stamp ar cr libxobjedit.a gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o mla_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o huge_asn_reader.o huge_file.o huge_file_process.o huge_asn_loader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjedit.a /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' @@ -92897,7 +92933,7 @@ rong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.a .libxobjread.a.stamp ar cr libxobjread.a reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjread.a /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' @@ -94664,7 +94700,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.a .libxobjutil.a.stamp ar cr libxobjutil.a weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjutil.a /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' @@ -95161,7 +95197,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/qparse/parse_utils.cpp -o parse_utils.o /bin/rm -f libxqueryparse.a .libxqueryparse.a.stamp ar cr libxqueryparse.a query_parse.o parser.o query_tree_print.o query_exec.o parse_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxqueryparse.a /bin/ln -f .xqueryparse.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xqueryparse.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' @@ -95479,7 +95515,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/connection_pool.cpp -o connection_pool.o /bin/rm -f libxthrserv.a .libxthrserv.a.stamp ar cr libxthrserv.a threaded_server.o server.o server_monitor.o connection_pool.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxthrserv.a /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' @@ -95489,17 +95525,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.edit_imgt_file builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/edit_imgt_file.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/makeogrdb.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrannote builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/makeogrannote.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95703,7 +95739,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp -o igblastn_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastn_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lblast_app_util -ligblast -lblast_sra_input-static -lsraread-static -lblastinput-static -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -llmdb -lpthread -lm -lpthread -o igblastn -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/igblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95909,7 +95945,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp -o igblastp_app.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastp_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lblast_app_util -ligblast -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -llmdb -lpthread -lm -lpthread -o igblastp -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/igblastp make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95921,33 +95957,33 @@ cd c\+\+ && make -j12 check TESTSUITEFLAGS="-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo786488 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo770460 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo786488 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo770460 check_r RUN_CHECK=Y; \ fi make[2]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build' make[2]: warning: -j12 forced in submake: resetting jobserver mode. ====================================================================== make[3]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786511 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770484 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/test' -/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo786511 check_add_r || exit 5 +/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo770484 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/jaeger' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/jaeger' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -95955,15 +95991,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' SKIP -- util/regexp/test_pcre make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' -/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' -/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786546 check_add_r || exit 5 +/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770524 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: @@ -95976,13 +96012,13 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786555 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770533 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo786546 check_add_r || exit 5 +/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo770524 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: @@ -95995,43 +96031,43 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo786586 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo770563 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo786546 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo770524 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress' -/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/diff' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/diff' -/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/image' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/image' -/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786624 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770602 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' -/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' -/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/bitset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96039,12 +96075,12 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/bitset' -/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' -/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project lmdb due to unmet requirements: @@ -96064,7 +96100,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' -/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' @@ -96072,77 +96108,77 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/demo' -/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo786523 check_add_r || exit 5 +/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo770496 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' -/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo786687 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo770670 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786691 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770674 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' -/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo786687 check_add_r || exit 5 +/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo770670 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/ext' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786687 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770670 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/test' -/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo786687 check_add_r || exit 5 +/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo770670 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/daemons' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/daemons' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' -/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786711 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770694 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' -/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786719 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770703 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo786719 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo770703 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/demo' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' -/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo786731 check_add_r || exit 5 +/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo770716 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' @@ -96150,14 +96186,14 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo786731 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo770716 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo786750 check_add_r || exit 5 +/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo770738 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: @@ -96170,7 +96206,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo786770 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo770767 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' @@ -96178,10 +96214,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system' -/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo786797 check_add_r || exit 5 +/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo770801 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' @@ -96189,26 +96225,26 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' TEST -- serial/datatool/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786797 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770801 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/test' -/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo786797 check_add_r || exit 5 +/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo770801 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/soap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/soap' -/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo786797 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo770801 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/grpc_integration' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/grpc_integration' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' -/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo786875 check_add_r || exit 5 +/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo770896 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -96216,38 +96252,38 @@ /bin/echo 'Warning: non-existent sub-project "bdb"' Warning: non-existent sub-project "bdb" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db' -/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo786885 check_add_r || exit 5 +/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo770905 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/util' -/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ctlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ctlib' -/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds100' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds100' -/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds-default' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds-default' -/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/mysql' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/mysql' -/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project odbc due to unmet requirements: @@ -96260,7 +96296,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo786918 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo770938 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' @@ -96268,7 +96304,7 @@ Warning: non-existent sub-project "samples" make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo786889 check_add_r || exit 5 +/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo770909 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/samples' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96281,272 +96317,272 @@ /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi' -/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786956 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo770979 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo786956 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo770979 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' -/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' -/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' -/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' -/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' -/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786984 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771009 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo786984 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771009 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' -/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo786996 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771026 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' -/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' -/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' -/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787016 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771074 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' -/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrez2' -/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' -/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' -/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' -/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/proj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/proj' -/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' -/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' -/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' -/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mmdb' -/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cn3d' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cn3d' -/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cdd' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cdd' -/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/ncbimime' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcsubstance' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcsubstance' -/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay' -/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay2' -/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' -/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/insdseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/insdseq' -/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/tinyseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/tinyseq' -/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biotree' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biotree' -/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrezgene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrezgene' -/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/omssa' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/omssa' -/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/remap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/remap' -/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqtest' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqtest' -/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' -/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' -/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbproj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbproj' -/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/trackmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/trackmgr' -/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valerr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valerr' -/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' -/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/access' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/access' -/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/docsum' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/docsum' -/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/featdef' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/featdef' -/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo787188 check_add_r || exit 5 +/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo771322 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' @@ -96555,69 +96591,69 @@ SKIP -- objects/genomecoll/gc_cli/gc_cli (unmet build REQUIRES) make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' -/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/homologene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/homologene' -/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mim' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mim' -/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/objprt' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/objprt' -/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' -/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/macro' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/macro' -/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genesbyloc' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genesbyloc' -/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/coords' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/coords' -/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/varrep' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/varrep' -/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo787239 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo771379 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo787243 check_add_r || exit 5 +/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo771390 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo787243 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo771390 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs' -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo786952 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo770975 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo787261 check_add_r || exit 5 +/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo771474 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp/primary_track' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96625,65 +96661,65 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp/primary_track' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects' -/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787270 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771531 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/test' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo787270 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo771531 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787278 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771575 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' -/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo787270 check_add_r || exit 5 +/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo771531 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/split' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' -/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo787299 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo771603 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/app' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/app' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787299 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771603 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787299 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771603 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo787315 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo771621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo787320 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo771625 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' @@ -96691,7 +96727,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787320 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771625 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' @@ -96700,10 +96736,10 @@ TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo787315 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo771621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787427 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771751 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96714,10 +96750,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo787315 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo771621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo787441 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo771768 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' @@ -96725,7 +96761,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787441 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771768 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96738,10 +96774,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo787315 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo771621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787506 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771803 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96752,10 +96788,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo787315 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo771621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787527 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo771818 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96769,18 +96805,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo787541 check_add_r || exit 5 +/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo771837 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/diag' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/diag' -/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo787541 check_add_r || exit 5 +/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo771837 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787551 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771847 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' @@ -96789,10 +96825,10 @@ SKIP -- objtools/pubseq_gateway/cassandra/test/psg_cassandra_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' -/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo787541 check_add_r || exit 5 +/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo771837 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787578 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771860 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' @@ -96801,7 +96837,7 @@ SKIP -- objtools/pubseq_gateway/client/test/test_psg_client_impl (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' -/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo787541 check_add_r || exit 5 +/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo771837 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project protobuf due to unmet requirements: @@ -96821,10 +96857,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo787541 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo771837 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787617 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771911 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' @@ -96838,43 +96874,43 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo787648 check_add_r || exit 5 +/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo771951 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' -/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' -/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' -/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787655 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo771957 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96882,10 +96918,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo787648 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo771951 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787714 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772002 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96898,20 +96934,20 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders' -/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/simple' -/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo787737 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo772028 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787737 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772028 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96923,63 +96959,63 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' -/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' -/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' -/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' -/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' -/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' -/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/linkout' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/linkout' -/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787799 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo772092 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' @@ -96988,41 +97024,41 @@ TEST -- objtools/eutils/efetch/test/test_pubmed_article make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo787752 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo772044 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils' -/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787890 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772191 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/unit_test' -/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo787890 check_add_r || exit 5 +/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo772191 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/pubmed_fetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/pubmed_fetch' -/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo787890 check_add_r || exit 5 +/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo772191 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/test_remote_updater' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/test_remote_updater' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' -/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787907 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo772215 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -97033,19 +97069,19 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787924 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772231 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo787290 check_add_r || exit 5 +/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo771594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo787932 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772240 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -97071,16 +97107,16 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo787952 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo772263 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo787956 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo772267 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo787960 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo772272 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra/test' @@ -97125,50 +97161,50 @@ /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra' -/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo788264 check_add_r || exit 5 +/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo772594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' -/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo788264 check_add_r || exit 5 +/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo772594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' -/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo788264 check_add_r || exit 5 +/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo772594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo788276 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo772608 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo788276 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772608 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo788264 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo772594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/core' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/core' -/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo788303 check_add_r || exit 5 +/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo772633 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex/makeindex' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex/makeindex' @@ -97179,15 +97215,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/api' -/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo788329 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772658 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' @@ -97196,29 +97232,29 @@ SKIP -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' -/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo788344 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772673 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/unit_test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo788344 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo772673 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/demo' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' -/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo788356 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772686 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' @@ -97227,7 +97263,7 @@ SKIP -- algo/blast/blast_sra_input/unit_test/blastsrainput_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo788291 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo772621 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/igblast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -97241,18 +97277,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast' /bin/echo 'Warning: non-existent sub-project "segmask"' Warning: non-existent sub-project "segmask" -/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo788264 check_add_r || exit 5 +/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo772594 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo788376 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo772708 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo788380 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo772717 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo788380 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo772717 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -97294,15 +97330,15 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo' -/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo788413 check_add_r || exit 5 +/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo772749 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party' -/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo788413 check_add_r || exit 5 +/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo772749 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party_static' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: @@ -97330,10 +97366,10 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo788413 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo772749 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo788441 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo772777 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp/test' @@ -97355,7 +97391,7 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo786507 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo770479 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app' make[4]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' @@ -97372,7 +97408,7 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo788458 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo772796 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -97438,7 +97474,7 @@ Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo788458 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo772796 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -97456,7 +97492,7 @@ Warning: non-existent sub-project "dustmasker" /bin/echo 'Warning: non-existent sub-project "segmasker"' Warning: non-existent sub-project "segmasker" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo788458 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo772796 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blastdb' @@ -97596,7 +97632,7 @@ Testing, please wait... -OK -- [serial/datatool] datatool.sh (real 0.30, user 0.22, sys 0.07) +OK -- [serial/datatool] datatool.sh (real 0.43, user 0.29, sys 0.16) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_mt ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_st @@ -97668,8 +97704,8 @@ dpkg-gencontrol: warning: package igblast: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -O--sourcedirectory=c\+\+ dh_builddeb -O--sourcedirectory=c\+\+ -dpkg-deb: building package 'igblast-dbgsym' in '../igblast-dbgsym_1.20.0-3_arm64.deb'. dpkg-deb: building package 'igblast' in '../igblast_1.20.0-3_arm64.deb'. +dpkg-deb: building package 'igblast-dbgsym' in '../igblast-dbgsym_1.20.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-igblast_1.20.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-igblast_1.20.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -97677,12 +97713,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2714501/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2248343 and its subdirectories -I: Current time: Thu Oct 9 08:37:44 -12 2025 -I: pbuilder-time-stamp: 1760042264 +I: removing directory /srv/workspace/pbuilder/2714501 and its subdirectories +I: Current time: Thu Nov 12 18:35:00 +14 2026 +I: pbuilder-time-stamp: 1794458100