Diff of the two buildlogs: -- --- b1/build.log 2025-03-02 19:09:21.119683988 +0000 +++ b2/build.log 2025-03-02 19:10:29.196601157 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Mar 2 07:03:35 -12 2025 -I: pbuilder-time-stamp: 1740942215 +I: Current time: Sun Apr 5 15:32:22 +14 2026 +I: pbuilder-time-stamp: 1775352742 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: applying modify_cmake.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2738969/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 5 01:32 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='6b4e800cd45d408eab546055df842bd0' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2738969' - PS1='# ' - PS2='> ' + INVOCATION_ID=41ea747d4f584c3284c6fc1601bf7108 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1160133 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QJIZ0Ubj/pbuilderrc_oHpu --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QJIZ0Ubj/b1 --logfile b1/build.log bcalm_2.2.3-5.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QJIZ0Ubj/pbuilderrc_GM5q --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QJIZ0Ubj/b2 --logfile b2/build.log bcalm_2.2.3-5.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2738969/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -227,7 +259,7 @@ Get: 109 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3.1 [292 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3.1 [72.0 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 libhdf5-dev amd64 1.14.5+repack-3 [3165 kB] -Fetched 75.5 MB in 4s (17.5 MB/s) +Fetched 75.5 MB in 6s (12.0 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19802 files and directories currently installed.) @@ -687,7 +719,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/bcalm-2.2.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bcalm_2.2.3-5_source.changes +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/bcalm-2.2.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../bcalm_2.2.3-5_source.changes dpkg-buildpackage: info: source package bcalm dpkg-buildpackage: info: source version 2.2.3-5 dpkg-buildpackage: info: source distribution unstable @@ -736,7 +772,7 @@ command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. --- Configuring done (4.6s) +-- Configuring done (0.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -749,7 +785,7 @@ -- Build files have been written to: /build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu dh_auto_build - cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bcalm-2.2.3 -B/build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -762,8 +798,8 @@ make -f CMakeFiles/bcalm.dir/build.make CMakeFiles/bcalm.dir/build make[3]: Entering directory '/build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu' [ 33%] Building CXX object CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -/usr/bin/c++ -DVERSION=\"v2.2.3\" -I/build/reproducible-path/bcalm-2.2.3/src -g -O2 -ffile-prefix-map=/build/reproducible-path/bcalm-2.2.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -MF CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o.d -o CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -c /build/reproducible-path/bcalm-2.2.3/src/bcalm_1.cpp [ 66%] Building CXX object CMakeFiles/bcalm.dir/src/main.cpp.o +/usr/bin/c++ -DVERSION=\"v2.2.3\" -I/build/reproducible-path/bcalm-2.2.3/src -g -O2 -ffile-prefix-map=/build/reproducible-path/bcalm-2.2.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -MF CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o.d -o CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -c /build/reproducible-path/bcalm-2.2.3/src/bcalm_1.cpp /usr/bin/c++ -DVERSION=\"v2.2.3\" -I/build/reproducible-path/bcalm-2.2.3/src -g -O2 -ffile-prefix-map=/build/reproducible-path/bcalm-2.2.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/bcalm.dir/src/main.cpp.o -MF CMakeFiles/bcalm.dir/src/main.cpp.o.d -o CMakeFiles/bcalm.dir/src/main.cpp.o -c /build/reproducible-path/bcalm-2.2.3/src/main.cpp [100%] Linking CXX executable bcalm /usr/bin/cmake -E cmake_link_script CMakeFiles/bcalm.dir/link.txt --verbose=1 @@ -777,7 +813,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/bcalm/ - cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/bcalm-2.2.3/debian/bcalm AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/bcalm-2.2.3/debian/bcalm AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bcalm-2.2.3 -B/build/reproducible-path/bcalm-2.2.3/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -790,20 +826,20 @@ -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/bin/bcalm -- Set non-toolchain portion of runtime path of "/build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/bin/bcalm" to "" -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf/Makefile --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf/testUF.cpp --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/tiny_read.fa +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/run-tiny.sh -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/pufferize -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/pufferize/refs.fa -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/pufferize/run.sh --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/run-tiny.sh +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/tiny_read.fa +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf/testUF.cpp +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/uf/Makefile -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/CMD -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test2.fa --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/README --- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test1.fa -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test3.fa +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/CMD +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test1.fa +-- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/README -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/bin/../VERSION -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/bin/../LICENSE -- Installing: /build/reproducible-path/bcalm-2.2.3/debian/bcalm/usr/bin/../README.md @@ -834,8 +870,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'bcalm-dbgsym' in '../bcalm-dbgsym_2.2.3-5_amd64.deb'. dpkg-deb: building package 'bcalm' in '../bcalm_2.2.3-5_amd64.deb'. +dpkg-deb: building package 'bcalm-dbgsym' in '../bcalm-dbgsym_2.2.3-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../bcalm_2.2.3-5_amd64.buildinfo dpkg-genchanges --build=binary -O../bcalm_2.2.3-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -843,12 +879,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1160133/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2738969 and its subdirectories -I: Current time: Sun Mar 2 07:09:20 -12 2025 -I: pbuilder-time-stamp: 1740942560 +I: removing directory /srv/workspace/pbuilder/1160133 and its subdirectories +I: Current time: Sun Apr 5 15:33:27 +14 2026 +I: pbuilder-time-stamp: 1775352807