Diff of the two buildlogs: -- --- b1/build.log 2025-03-03 05:18:21.675500494 +0000 +++ b2/build.log 2025-03-03 05:21:28.755035476 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Mar 2 17:11:14 -12 2025 -I: pbuilder-time-stamp: 1740978674 +I: Current time: Mon Apr 6 01:41:22 +14 2026 +I: pbuilder-time-stamp: 1775389282 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying dcmtk-3.6.1-compatibility I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1124732/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 5 11:41 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='4091f2986c6245139259c47d6305963b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1124732' - PS1='# ' - PS2='> ' + INVOCATION_ID=4b07af196107426f95c4f9e7f175c661 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=971891 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.UlVCMQzV/pbuilderrc_LMdy --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.UlVCMQzV/b1 --logfile b1/build.log cmtk_3.3.1p2+dfsg-3.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.UlVCMQzV/pbuilderrc_AEQS --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.UlVCMQzV/b2 --logfile b2/build.log cmtk_3.3.1p2+dfsg-3.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1124732/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -320,7 +352,7 @@ Get: 170 http://deb.debian.org/debian trixie/main amd64 xkb-data all 2.42-1 [790 kB] Get: 171 http://deb.debian.org/debian trixie/main amd64 xserver-common all 2:21.1.15-3 [2399 kB] Get: 172 http://deb.debian.org/debian trixie/main amd64 xvfb amd64 2:21.1.15-3 [3179 kB] -Fetched 131 MB in 4s (37.3 MB/s) +Fetched 131 MB in 1s (89.8 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19802 files and directories currently installed.) @@ -1031,7 +1063,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cmtk_3.3.1p2+dfsg-3_source.changes +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cmtk_3.3.1p2+dfsg-3_source.changes dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p2+dfsg-3 dpkg-buildpackage: info: source distribution unstable @@ -1154,7 +1190,7 @@ -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found --- System is Linux-6.1.0-31-amd64 +-- System is Linux-6.12.9+bpo-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h @@ -1242,7 +1278,7 @@ the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. --- Configuring done (26.6s) +-- Configuring done (7.9s) CMake Warning (dev) at libs/System/CMakeLists.txt:77 (ADD_LIBRARY): Policy CMP0115 is not set: Source file extensions must be explicit. Run "cmake --help-policy CMP0115" for policy details. Use the cmake_policy @@ -1253,7 +1289,7 @@ /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkStackBacktrace.cxx This warning is for project developers. Use -Wno-dev to suppress it. --- Generating done (1.2s) +-- Generating done (0.5s) CMake Warning: Manually-specified variables were not used by the project: @@ -1271,7 +1307,7 @@ -- Build files have been written to: /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg' dh_auto_build - cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/cmtk-3.3.1p2+dfsg -B/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -1281,269 +1317,269 @@ make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 0%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -[ 0%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -[ 0%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -MF CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/cholesky.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/gammaf.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/hsschur.cxx -[ 0%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/bdsvd.cxx -[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o -[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -MF CMakeFiles/cmtkNumerics.dir/reflections.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/reflections.cxx -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd 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libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o -MF CMakeFiles/cmtkNumerics.dir/det.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/det.cxx -[ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/hessenberg.cxx +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd 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libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ap.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/ap.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/blas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/blas.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/bidiagonal.cxx -[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 1%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o +[ 1%] Building C object 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/usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o -MF CMakeFiles/NrrdIO.dir/comment.o.d -o CMakeFiles/NrrdIO.dir/comment.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/comment.c -[ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-attr.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-attr.c -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/ibetaf.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c 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-DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lq.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/lq.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lu.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/lu.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/normaldistr.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/nsevd.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/qr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/qr.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -MF CMakeFiles/cmtkNumerics.dir/rotations.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/rotations.cxx -[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-entity.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-entity.c -[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o +[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o +[ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o +[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-private.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-private.c +[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o +[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o -MF CMakeFiles/NrrdIO.dir/enumsNrrd.o.d -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/enumsNrrd.c -[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-entity.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-entity.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ap.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/ap.cxx +[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o +[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o +[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-attr.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-attr.c +[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/bdsvd.cxx +[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o +[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/bidiagonal.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-index.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-index.c -[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o +[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o +[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o +[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/blas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/blas.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-get.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-get.c +[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o -MF CMakeFiles/NrrdIO.dir/mop.o.d -o CMakeFiles/NrrdIO.dir/mop.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/mop.c -[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sblas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/sblas.cxx -[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/sevd.cxx -[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o +[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o +[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -MF CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/cholesky.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-node.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-node.c cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o -MF CMakeFiles/NrrdIO.dir/string.o.d -o CMakeFiles/NrrdIO.dir/string.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/string.c -[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -MF CMakeFiles/cmtkNumerics.dir/spddet.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/spddet.cxx -[ 5%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-private.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-private.c -[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/studenttdistr.cxx -[ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-get.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-get.c -[ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-set.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-set.c -[ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o -[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o +[ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o -MF CMakeFiles/NrrdIO.dir/754.o.d -o CMakeFiles/NrrdIO.dir/754.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/754.c -[ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/studentttests.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/svd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/svd.cxx -[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o -MF CMakeFiles/NrrdIO.dir/defaultsNrrd.o.d -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/defaultsNrrd.c -[ 8%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o -[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o -MF CMakeFiles/NrrdIO.dir/parseAir.o.d -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/parseAir.c +[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o +[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o -MF CMakeFiles/cmtkNumerics.dir/det.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/det.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-file.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-file.c -[ 8%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-node.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-node.c -[ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/tdevd.cxx -[ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/tridiagonal.cxx -[ 8%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o +[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o +[ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/gammaf.cxx +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-set.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-set.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o -MF CMakeFiles/NrrdIO.dir/defaultsNrrd.o.d -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/defaultsNrrd.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/hessenberg.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-search.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-search.c -[ 8%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o -[ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/hsschur.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-string.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-string.c -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -MF CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/mersenne.cxx -[ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o -MF CMakeFiles/NrrdIO.dir/format.o.d -o CMakeFiles/NrrdIO.dir/format.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/format.c -[ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o -MF CMakeFiles/NrrdIO.dir/parseAir.o.d -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/parseAir.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/ibetaf.cxx +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o +[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o -MF CMakeFiles/NrrdIO.dir/dio.o.d -o CMakeFiles/NrrdIO.dir/dio.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/dio.c -[ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/lbfgsb.cxx +[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lq.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/lq.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o -MF CMakeFiles/NrrdIO.dir/format.o.d -o CMakeFiles/NrrdIO.dir/format.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/format.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lu.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/lu.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/normaldistr.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o -MF CMakeFiles/NrrdIO.dir/parseNrrd.o.d -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/parseNrrd.c -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/nsevd.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o -MF CMakeFiles/NrrdIO.dir/formatEPS.o.d -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatEPS.c -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o -MF CMakeFiles/NrrdIO.dir/formatNRRD.o.d -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatNRRD.c -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o -MF CMakeFiles/NrrdIO.dir/encoding.o.d -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encoding.c -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o -MF CMakeFiles/NrrdIO.dir/formatNRRD.o.d -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatNRRD.c cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o -MF CMakeFiles/NrrdIO.dir/encodingAscii.o.d -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingAscii.c -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o -MF CMakeFiles/NrrdIO.dir/formatPNG.o.d -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatPNG.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o -MF CMakeFiles/NrrdIO.dir/encodingBzip2.o.d -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingBzip2.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o -MF CMakeFiles/NrrdIO.dir/formatPNM.o.d -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatPNM.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o +[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o -MF CMakeFiles/NrrdIO.dir/accessors.o.d -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/accessors.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o +[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o -MF CMakeFiles/NrrdIO.dir/encodingGzip.o.d -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingGzip.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o +[ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/qr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/qr.cxx +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o +[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o -MF CMakeFiles/NrrdIO.dir/formatText.o.d -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatText.c -[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o -MF CMakeFiles/NrrdIO.dir/array.o.d -o CMakeFiles/NrrdIO.dir/array.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/array.c -[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -MF CMakeFiles/cmtkNumerics.dir/reflections.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/reflections.cxx +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o -MF CMakeFiles/NrrdIO.dir/encodingHex.o.d -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingHex.c -[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o -MF CMakeFiles/NrrdIO.dir/formatVTK.o.d -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatVTK.c -[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o +[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -MF CMakeFiles/cmtkNumerics.dir/rotations.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/rotations.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o -MF CMakeFiles/NrrdIO.dir/read.o.d -o CMakeFiles/NrrdIO.dir/read.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/read.c -[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o +[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o +[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sblas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/sblas.cxx +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o +[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/sevd.cxx +[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o -MF CMakeFiles/NrrdIO.dir/arraysNrrd.o.d -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/arraysNrrd.c -[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o -MF CMakeFiles/NrrdIO.dir/encodingRaw.o.d -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingRaw.c -[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o -MF CMakeFiles/NrrdIO.dir/gzio.o.d -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/gzio.c -[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o +[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -MF CMakeFiles/cmtkNumerics.dir/spddet.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/spddet.cxx +[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/studenttdistr.cxx +[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o -MF CMakeFiles/NrrdIO.dir/reorder.o.d -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/reorder.c -[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o +[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/studentttests.cxx +[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/svd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/svd.cxx +[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o -MF CMakeFiles/NrrdIO.dir/write.o.d -o CMakeFiles/NrrdIO.dir/write.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/write.c -[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o +[ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o +[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o -MF CMakeFiles/NrrdIO.dir/axis.o.d -o CMakeFiles/NrrdIO.dir/axis.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/axis.c -[ 14%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o -MF CMakeFiles/NrrdIO.dir/endianAir.o.d -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/endianAir.c -[ 14%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o +[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o -MF CMakeFiles/NrrdIO.dir/keyvalue.o.d -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/keyvalue.c -[ 14%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o +[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o +[ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o -MF CMakeFiles/NrrdIO.dir/biffbiff.o.d -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/biffbiff.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/tdevd.cxx +[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/tridiagonal.cxx +[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -MF CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Numerics/mersenne.cxx [ 14%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o -[ 14%] Linking C shared library ../../bin/libcmtkMxml.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o -MF CMakeFiles/NrrdIO.dir/biffmsg.o.d -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/biffmsg.c [ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o -MF CMakeFiles/NrrdIO.dir/methodsNrrd.o.d -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/methodsNrrd.c [ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o -MF CMakeFiles/NrrdIO.dir/methodsNrrd.o.d -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/methodsNrrd.c cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o -MF CMakeFiles/NrrdIO.dir/endianNrrd.o.d -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/endianNrrd.c -/usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,--dependency-file=CMakeFiles/cmtkMxml.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so "CMakeFiles/cmtkMxml.dir/mxml-attr.c.o" "CMakeFiles/cmtkMxml.dir/mxml-entity.c.o" "CMakeFiles/cmtkMxml.dir/mxml-index.c.o" "CMakeFiles/cmtkMxml.dir/mxml-private.c.o" "CMakeFiles/cmtkMxml.dir/mxml-get.c.o" "CMakeFiles/cmtkMxml.dir/mxml-set.c.o" "CMakeFiles/cmtkMxml.dir/mxml-file.c.o" "CMakeFiles/cmtkMxml.dir/mxml-node.c.o" "CMakeFiles/cmtkMxml.dir/mxml-search.c.o" "CMakeFiles/cmtkMxml.dir/mxml-string.c.o" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o -MF CMakeFiles/NrrdIO.dir/sane.o.d -o CMakeFiles/NrrdIO.dir/sane.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/sane.c -[ 15%] Built target cmtkMxml +[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o -MF CMakeFiles/NrrdIO.dir/enum.o.d -o CMakeFiles/NrrdIO.dir/enum.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/enum.c +[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o -MF CMakeFiles/NrrdIO.dir/miscAir.o.d -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/miscAir.c +[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o -MF CMakeFiles/NrrdIO.dir/simple.o.d -o CMakeFiles/NrrdIO.dir/simple.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/simple.c +[ 16%] Linking C shared library ../../bin/libNrrdIO.so +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 +[ 16%] Linking C shared library ../../bin/libcmtkMxml.so +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 +/usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,--dependency-file=CMakeFiles/NrrdIO.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,--dependency-file=CMakeFiles/cmtkMxml.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so "CMakeFiles/cmtkMxml.dir/mxml-attr.c.o" "CMakeFiles/cmtkMxml.dir/mxml-entity.c.o" "CMakeFiles/cmtkMxml.dir/mxml-index.c.o" "CMakeFiles/cmtkMxml.dir/mxml-private.c.o" "CMakeFiles/cmtkMxml.dir/mxml-get.c.o" "CMakeFiles/cmtkMxml.dir/mxml-set.c.o" "CMakeFiles/cmtkMxml.dir/mxml-file.c.o" "CMakeFiles/cmtkMxml.dir/mxml-node.c.o" "CMakeFiles/cmtkMxml.dir/mxml-search.c.o" "CMakeFiles/cmtkMxml.dir/mxml-string.c.o" +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 16%] Built target NrrdIO +[ 16%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake "--color=" -[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o -MF CMakeFiles/NrrdIO.dir/enum.o.d -o CMakeFiles/NrrdIO.dir/enum.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/enum.c make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build -[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o -[ 15%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o -MF CMakeFiles/NrrdIO.dir/miscAir.o.d -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/miscAir.c -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o -MF CMakeFiles/NrrdIO.dir/simple.o.d -o CMakeFiles/NrrdIO.dir/simple.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/simple.c -[ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -[ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLine.cxx +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineCallback.cxx +[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLine.cxx +[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineItem.cxx -[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx -[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineHelp.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineMan.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineXML.cxx +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineWiki.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; - | ^~~~~~~~ -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStream.cxx -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamFile.cxx -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o +[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamPipe.cxx -[ 19%] Linking C shared library ../../bin/libNrrdIO.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 -/usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,--dependency-file=CMakeFiles/NrrdIO.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkMemory.cxx +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamZlib.cxx -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkConsole.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx -[ 20%] Built target NrrdIO -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkMemory.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkMountPoints.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkProgress.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkProgressConsole.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkRegressionTracker.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const std::string&)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 147 | getcwd( absPath, PATH_MAX ); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkStrUtility.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkStackBacktrace.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreads.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o +[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o +[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkStrUtility.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreads.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreadPoolThreads.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreadSemaphore.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkTimers.cxx -[ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx -[ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,--dependency-file=CMakeFiles/cmtkSystem.dir/link.d -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; + | ^~~~~~~~ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const std::string&)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 147 | getcwd( absPath, PATH_MAX ); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 22%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 -[ 22%] Built target cmtkSystem /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,--dependency-file=CMakeFiles/cmtkNumerics.dir/link.d -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkNumerics +[ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,--dependency-file=CMakeFiles/cmtkSystem.dir/link.d -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake "--color=" @@ -1551,102 +1587,106 @@ make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveDeformationModel.cxx -[ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveShapeModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAffineXform.cxx +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveDeformationModel.cxx +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAffineXform.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveShapeModel.cxx +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx -[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx -[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx -[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkBitVector.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid_Crop.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid_Crop.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridFilter.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o +[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDeformationField.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDirectionSet.cxx -[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFilterVolume.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToLandmarks.cxx -[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx +[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o +[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o +[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToXformList.cxx -In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.h:254, - from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMatrix4x4.h:38, - from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.h:38, - from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx:33: -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.txx: In constructor 'cmtk::CompatibilityMatrix4x4::CompatibilityMatrix4x4(const cmtk::CoordinateVector&, bool) [with T = double]': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.txx:286:9: warning: writing 128 bytes into a region of size 32 [-Wstringop-overflow=] - 286 | memcpy( this->m_Matrix, other.m_Matrix, sizeof( this->m_Matrix ) ); - | ^ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.h:177:29: note: destination object 'cmtk::FixedSquareMatrix<4, double>::m_Matrix' of size 32 - 177 | typename Self::ScalarType m_Matrix[NDIM][NDIM]; - | ^~~~~~~~ -[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o +[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o +[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitToXformListBase.cxx -[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFunctional.cxx -[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkGeneralLinearModel.cxx -[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkHistogram.cxx -[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkHypothesisTests.cxx -[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o +[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperation.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationMapValues.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationThreshold.cxx +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx +In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.h:254, + from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMatrix4x4.h:38, + from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.h:38, + from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx:33: +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.txx: In constructor 'cmtk::CompatibilityMatrix4x4::CompatibilityMatrix4x4(const cmtk::CoordinateVector&, bool) [with T = double]': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.txx:286:9: warning: writing 128 bytes into a region of size 32 [-Wstringop-overflow=] + 286 | memcpy( this->m_Matrix, other.m_Matrix, sizeof( this->m_Matrix ) ); + | ^ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFixedSquareMatrix.h:177:29: note: destination object 'cmtk::FixedSquareMatrix<4, double>::m_Matrix' of size 32 + 177 | typename Self::ScalarType m_Matrix[NDIM][NDIM]; + | ^~~~~~~~ +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function 'virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)': /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); @@ -1684,18 +1724,8 @@ | | | int | %lld -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationRevert.cxx -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogram.cxx -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogramBase.cxx -[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmark.cxx /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function 'static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)': /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format '%d' expects argument of type 'int*', but argument 3 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); @@ -1715,11 +1745,17 @@ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogram.cxx +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogramBase.cxx +[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmarkPair.cxx +[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmarkList.cxx -[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmarkPairList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMagphanEMR051.cxx @@ -1771,21 +1807,21 @@ cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx -[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx +[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume.cxx +[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx -[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o +[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Space.cxx @@ -1793,10 +1829,10 @@ cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx -[ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx +[ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o @@ -1808,9 +1844,9 @@ [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkXform.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Base/cmtkXform_Inverse.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o @@ -1828,46 +1864,149 @@ make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o +[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkAffineXformITKIO.cxx -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamStudyList.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkFileFormat.cxx +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkFileFormat.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkLandmarkIO.cxx +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkLandmarkListIO.cxx +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkStudy.cxx -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkStudyList.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStream.cxx +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamInput.cxx +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFile.cxx +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx +[ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx +[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o +[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromSlices.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeIO.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIO.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformListIO.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONifti.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONrrd.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -MF CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o.d -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/nifti1_io_math.c +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx +[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o +[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSQLite.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] + 564 | fprintf( File, "%ld ", array[i] ); + | ~~^ ~~~~~~~~ + | | | + | long int long long int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const std::string&, const cmtk::UniformVolume&)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] + 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] + 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] + 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const cmtk::UniformVolume::SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const std::string&)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 58 | fgets( line, 96, fp ); + | ~~~~~^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 137 | std::auto_ptr m_Document; + | ^~~~~~~~ +In file included from /usr/include/c++/14/memory:78, + from /usr/include/dcmtk/ofstd/ofmem.h:32, + from /usr/include/dcmtk/oflog/appender.h:33, + from /usr/include/dcmtk/oflog/spi/apndatch.h:33, + from /usr/include/dcmtk/oflog/logger.h:36, + from /usr/include/dcmtk/oflog/oflog.h:28, + from /usr/include/dcmtk/dcmdata/dctypes.h:27, + from /usr/include/dcmtk/dcmimgle/didocu.h:28, + from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:41: +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx: In member function 'void cmtk::DICOM::InitFromFile(const std::string&)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 112 | std::auto_ptr fileformat( new DcmFileFormat ); + | ^~~~~~~~ +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); + | ^~~~~~~~ +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; @@ -1897,29 +2036,6 @@ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const std::string&)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 155 | std::auto_ptr fileformat( new DcmFileFormat ); - | ^~~~~~~~ -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); - | ^~~~~~~~ -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); - | ^~~~~~~~ -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStream.cxx -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamInput.cxx In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] @@ -1950,93 +2066,26 @@ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFile.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromSlices.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeIO.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIO.cxx -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformListIO.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] - 564 | fprintf( File, "%ld ", array[i] ); - | ~~^ ~~~~~~~~ - | | | - | long int long long int - | %lld -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONifti.cxx -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONrrd.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const std::string&, const cmtk::UniformVolume&)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] - 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] - 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] - 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const cmtk::UniformVolume::SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const std::string&)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 58 | fgets( line, 96, fp ); - | ~~~~~^~~~~~~~~~~~~~~~ -[ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -MF CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o.d -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/nifti1_io_math.c -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx -[ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSQLite.cxx -In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 137 | std::auto_ptr m_Document; +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const std::string&)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ -In file included from /usr/include/c++/14/memory:78, - from /usr/include/dcmtk/ofstd/ofmem.h:32, - from /usr/include/dcmtk/oflog/appender.h:33, - from /usr/include/dcmtk/oflog/spi/apndatch.h:33, - from /usr/include/dcmtk/oflog/logger.h:36, - from /usr/include/dcmtk/oflog/oflog.h:28, - from /usr/include/dcmtk/dcmdata/dctypes.h:27, - from /usr/include/dcmtk/dcmimgle/didocu.h:28, - from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:41: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); + | ^~~~~~~~ +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); + | ^~~~~~~~ +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ +In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ @@ -2052,7 +2101,7 @@ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: +In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ @@ -2068,19 +2117,6 @@ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx: In member function 'void cmtk::DICOM::InitFromFile(const std::string&)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 112 | std::auto_ptr fileformat( new DcmFileFormat ); - | ^~~~~~~~ -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); - | ^~~~~~~~ -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,--dependency-file=CMakeFiles/cmtkIO.dir/link.d -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz @@ -2095,82 +2131,82 @@ [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o +[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o +[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkAffineRegistration.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkAffineRegistration.cxx -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkCongealingFunctional.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkElasticRegistration.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkHausdorffDistance.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistration.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o +[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o +[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o +[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx -[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx -[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx -[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx -[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx -[ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o @@ -2178,10 +2214,10 @@ cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkRegistrationCallback.cxx -[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx +[ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o @@ -2191,10 +2227,10 @@ [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx -[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o +[ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx +[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx @@ -2204,10 +2240,10 @@ cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx -[ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx +[ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o @@ -2230,52 +2266,52 @@ make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -[ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -MF CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o.d -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx +[ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o +[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -MF CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o.d -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -MF CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o.d -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx +[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx +[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx [ 67%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 @@ -2291,1056 +2327,941 @@ make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake "--color=" -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake "--color=" make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build +make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps 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Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 67%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o -make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o -MF CMakeFiles/avg_adm.dir/avg_adm.cxx.o.d -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/avg_adm.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend +make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend +make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake "--color=" -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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/build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake "--color=" -[ 67%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend +make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend +make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake "--color=" -[ 68%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/describe.dir/describe.cxx.o -MF CMakeFiles/describe.dir/describe.cxx.o.d -o CMakeFiles/describe.dir/describe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build -[ 68%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -MF CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o.d -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dwi_mask_bad_slices.cxx -make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build -[ 68%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 68%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o -MF CMakeFiles/concat_affine.dir/concat_affine.cxx.o.d -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/concat_affine.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd 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-I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -MF CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o.d -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_init.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o -MF CMakeFiles/dof2mat.dir/dof2mat.cxx.o.d -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dof2mat.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend +make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend +make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend +make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend +make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build +make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake "--color=" -[ 69%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o -[ 69%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -[ 69%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o -[ 69%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -[ 69%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o -[ 70%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -MF CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o.d -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_affine.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -MF CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o.d -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/epiunwarp.cxx +make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_affine.dir/average_affine.cxx.o -MF CMakeFiles/average_affine.dir/average_affine.cxx.o.d -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_affine.cxx +make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fib2image.dir/fib2image.cxx.o -MF CMakeFiles/fib2image.dir/fib2image.cxx.o.d -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fib2image.cxx -make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fibxform.dir/fibxform.cxx.o -MF CMakeFiles/fibxform.dir/fibxform.cxx.o.d -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fibxform.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/film.dir/film.cxx.o -MF CMakeFiles/film.dir/film.cxx.o.d -o CMakeFiles/film.dir/film.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/film.cxx +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 70%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 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-I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_images.dir/average_images.cxx.o -MF CMakeFiles/average_images.dir/average_images.cxx.o.d -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_images.cxx -[ 70%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o -[ 70%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/convertx.dir/convertx.cxx.o -MF CMakeFiles/convertx.dir/convertx.cxx.o.d -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/convertx.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/destripe.dir/destripe.cxx.o -MF CMakeFiles/destripe.dir/destripe.cxx.o.d -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/destripe.cxx -[ 70%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -[ 70%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o -[ 70%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_labels.dir/average_labels.cxx.o -MF CMakeFiles/average_labels.dir/average_labels.cxx.o.d -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_labels.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -MF CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o.d -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_warp.cxx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/filter.dir/filter.cxx.o -MF CMakeFiles/filter.dir/filter.cxx.o.d -o CMakeFiles/filter.dir/filter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/filter.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] - 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] - 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:50: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] - 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:24: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] - 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:29: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] - 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:34: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] - 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); - | ~^ - | | - | int - | %lld -[ 70%] Linking CXX executable ../bin/dof2mat -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dof2mat.dir/link.d CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 70%] Built target dof2mat -make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 70%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -MF CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o.d -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_dfield.cxx -[ 70%] Linking CXX executable ../bin/asegment -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/asegment.dir/link.d CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 70%] Built target asegment -make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend +make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build +make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build +make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build +make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 70%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -MF CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o.d -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform.cxx -[ 70%] Linking CXX executable ../bin/convert_warp -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 -[ 71%] Linking CXX executable ../bin/concat_affine -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/convert_warp.dir/link.d CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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&& /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build +make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 72%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -MF CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o.d -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform_landmarks.cxx -[ 73%] Linking CXX executable ../bin/average_labels -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/concat_affine.dir/link.d CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 73%] Linking CXX executable ../bin/average_affine -[ 73%] Built target concat_affine -make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 +make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build +make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -MF CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o.d -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_spline_dfield.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_labels.dir/link.d CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 73%] Linking CXX executable ../bin/fit_affine_dfield -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_affine.dir/link.d CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 73%] Built target average_affine -[ 73%] Built target average_labels -make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend +make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake "--color=" +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -MF CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o.d -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_spline_xform.cxx -[ 74%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/geomatch.dir/geomatch.cxx.o -MF CMakeFiles/geomatch.dir/geomatch.cxx.o.d -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/geomatch.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_affine_dfield.dir/link.d CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 75%] Linking CXX executable ../bin/filter -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script 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apps/CMakeFiles/glm.dir/glm.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/glm.dir/glm.cxx.o -MF CMakeFiles/glm.dir/glm.cxx.o.d -o CMakeFiles/glm.dir/glm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/glm.cxx -[ 75%] Linking CXX executable ../bin/fib2image -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/filter.dir/link.d CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 75%] Linking CXX executable ../bin/destripe -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 -[ 75%] Built target filter -make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg 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-I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gmm.dir/gmm.cxx.o -MF CMakeFiles/gmm.dir/gmm.cxx.o.d -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gmm.cxx -[ 76%] Linking CXX executable ../bin/describe -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 -[ 76%] Linking CXX executable ../bin/fibxform -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fib2image.dir/link.d CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/destripe.dir/link.d CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 76%] Built target destripe -make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend +make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build +make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build +make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build +make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake "--color=" -[ 76%] Built target fib2image -[ 76%] Linking CXX executable ../bin/epiunwarp -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 -make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend +make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 76%] Linking CXX executable ../bin/groupwise_init -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 -[ 76%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gregxform.dir/gregxform.cxx.o -MF CMakeFiles/gregxform.dir/gregxform.cxx.o.d -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/describe.dir/link.d CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 76%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o -MF CMakeFiles/hausdorff.dir/hausdorff.cxx.o.d -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/hausdorff.cxx -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 76%] Built target describe -make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 76%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG 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/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/histogram.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fibxform.dir/link.d CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 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-Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/groupwise_init.dir/link.d CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build +make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 76%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/imagemath.dir/imagemath.cxx.o -MF CMakeFiles/imagemath.dir/imagemath.cxx.o.d -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/imagemath.cxx -[ 76%] Built target groupwise_init -make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 77%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -cd 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apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -MF CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o.d -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/interleaved_bad_slices.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/epiunwarp.dir/link.d CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 77%] Built target epiunwarp -make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 77%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/jidb.dir/jidb.cxx.o -MF CMakeFiles/jidb.dir/jidb.cxx.o.d -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/jidb.cxx -[ 77%] Linking CXX executable ../bin/avg_adm -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 -[ 77%] Linking CXX executable ../bin/average_images -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_images.dir/link.d CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/avg_adm.dir/link.d CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 78%] Linking CXX executable ../bin/dwi_mask_bad_slices -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 -[ 78%] Built target average_images -[ 78%] Built target avg_adm -make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend +make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build +make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps 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apps/CMakeFiles/levelset.dir/levelset.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/levelset.dir/levelset.cxx.o -MF CMakeFiles/levelset.dir/levelset.cxx.o.d -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/levelset.cxx -[ 78%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lsba.dir/lsba.cxx.o -MF CMakeFiles/lsba.dir/lsba.cxx.o.d -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lsba.cxx -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 191 | fgets( line, 80, infile ); - | ~~~~~^~~~~~~~~~~~~~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dwi_mask_bad_slices.dir/link.d CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 78%] Built target dwi_mask_bad_slices -make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 78%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lmsba.dir/lmsba.cxx.o -MF CMakeFiles/lmsba.dir/lmsba.cxx.o.d -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lmsba.cxx -[ 78%] Linking CXX executable ../bin/fit_affine_xform_landmarks -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_affine_xform_landmarks.dir/link.d CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 78%] Built target fit_affine_xform_landmarks -make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build +make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build +[ 67%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o +make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build +[ 67%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o +[ 67%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lvote.dir/lvote.cxx.o -MF CMakeFiles/lvote.dir/lvote.cxx.o.d -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lvote.cxx -[ 79%] Linking CXX executable ../bin/groupwise_warp -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/groupwise_warp.dir/link.d CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 80%] Linking CXX executable ../bin/levelset -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 -[ 80%] Linking CXX executable ../bin/geomatch -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 -[ 80%] Built target groupwise_warp -[ 80%] Linking CXX executable ../bin/fit_affine_xform -make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake "--color=" -[ 81%] Linking CXX executable ../bin/hausdorff -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build +[ 67%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/describe.dir/describe.cxx.o -MF CMakeFiles/describe.dir/describe.cxx.o.d -o CMakeFiles/describe.dir/describe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx +[ 67%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 81%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -MF CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o.d -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/make_initial_affine.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/geomatch.dir/link.d CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/levelset.dir/link.d CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 81%] Built target geomatch -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake "--color=" -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/hausdorff.dir/link.d CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 81%] Built target levelset -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_affine_xform.dir/link.d CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend +make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -MF CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o.d -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_warp.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o -MF CMakeFiles/concat_affine.dir/concat_affine.cxx.o.d -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/concat_affine.cxx +make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build +[ 68%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -MF CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o.d -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_affine.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o -MF CMakeFiles/avg_adm.dir/avg_adm.cxx.o.d -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/avg_adm.cxx make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 81%] Built target hausdorff -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build -make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend +[ 69%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o +make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build +[ 69%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_affine.dir/average_affine.cxx.o -MF CMakeFiles/average_affine.dir/average_affine.cxx.o.d -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_affine.cxx make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 81%] Built target fit_affine_xform +[ 69%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -MF CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o.d -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/groupwise_init.cxx make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/convertx.dir/convertx.cxx.o -MF CMakeFiles/convertx.dir/convertx.cxx.o.d -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/convertx.cxx +[ 69%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake "--color=" -[ 81%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/asegment.dir/asegment.cxx.o -MF CMakeFiles/asegment.dir/asegment.cxx.o.d -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/asegment.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_images.dir/average_images.cxx.o -MF CMakeFiles/average_images.dir/average_images.cxx.o.d -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_images.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o -MF CMakeFiles/dof2mat.dir/dof2mat.cxx.o.d -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dof2mat.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_labels.dir/average_labels.cxx.o -MF CMakeFiles/average_labels.dir/average_labels.cxx.o.d -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/average_labels.cxx +[ 69%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o +[ 69%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o -MF CMakeFiles/convert_warp.dir/convert_warp.cxx.o.d -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/convert_warp.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/filter.dir/filter.cxx.o -MF CMakeFiles/filter.dir/filter.cxx.o.d -o CMakeFiles/filter.dir/filter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/filter.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/destripe.dir/destripe.cxx.o -MF CMakeFiles/destripe.dir/destripe.cxx.o.d -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/destripe.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -MF CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o.d -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dwi_mask_bad_slices.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/film.dir/film.cxx.o -MF CMakeFiles/film.dir/film.cxx.o.d -o CMakeFiles/film.dir/film.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/film.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -MF CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o.d -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform.cxx +[ 70%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -MF CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o.d -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/epiunwarp.cxx +[ 70%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o +[ 70%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fibxform.dir/fibxform.cxx.o -MF CMakeFiles/fibxform.dir/fibxform.cxx.o.d -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fibxform.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fib2image.dir/fib2image.cxx.o -MF CMakeFiles/fib2image.dir/fib2image.cxx.o.d -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fib2image.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -MF CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o.d -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_dfield.cxx +[ 71%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o +[ 71%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -MF CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o.d -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_spline_dfield.cxx +[ 71%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/geomatch.dir/geomatch.cxx.o -MF CMakeFiles/geomatch.dir/geomatch.cxx.o.d -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/geomatch.cxx +[ 71%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/glm.dir/glm.cxx.o -MF CMakeFiles/glm.dir/glm.cxx.o.d -o CMakeFiles/glm.dir/glm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/glm.cxx +[ 71%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -MF CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o.d -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_spline_xform.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/histogram.dir/histogram.cxx.o -MF CMakeFiles/histogram.dir/histogram.cxx.o.d -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/histogram.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o -MF CMakeFiles/hausdorff.dir/hausdorff.cxx.o.d -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/hausdorff.cxx +[ 72%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o +[ 72%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/imagemath.dir/imagemath.cxx.o -MF CMakeFiles/imagemath.dir/imagemath.cxx.o.d -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/imagemath.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gregxform.dir/gregxform.cxx.o -MF CMakeFiles/gregxform.dir/gregxform.cxx.o.d -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx +[ 73%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o +[ 73%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o +[ 73%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gmm.dir/gmm.cxx.o -MF CMakeFiles/gmm.dir/gmm.cxx.o.d -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gmm.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -MF CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o.d -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform_landmarks.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -MF CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o.d -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/interleaved_bad_slices.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/jidb.dir/jidb.cxx.o -MF CMakeFiles/jidb.dir/jidb.cxx.o.d -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/jidb.cxx +[ 74%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o +[ 74%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o +[ 74%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/levelset.dir/levelset.cxx.o -MF CMakeFiles/levelset.dir/levelset.cxx.o.d -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/levelset.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lsba.dir/lsba.cxx.o -MF CMakeFiles/lsba.dir/lsba.cxx.o.d -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lsba.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lmsba.dir/lmsba.cxx.o -MF CMakeFiles/lmsba.dir/lmsba.cxx.o.d -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lmsba.cxx +[ 74%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o +[ 74%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o -MF CMakeFiles/mat2dof.dir/mat2dof.cxx.o.d -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mat2dof.cxx -[ 81%] Linking CXX executable ../bin/convertx -[ 82%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -MF CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o.d -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_adni_phantom.cxx +[ 74%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -MF CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o.d -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/make_initial_affine.cxx +[ 75%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -MF CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o.d -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_analyze_hdr.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lvote.dir/lvote.cxx.o -MF CMakeFiles/lvote.dir/lvote.cxx.o.d -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/lvote.cxx +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] + 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] + 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:50: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] + 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:24: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] + 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:29: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] + 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:34: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] + 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); + | ~^ + | | + | int + | %lld +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 191 | fgets( line, 80, infile ); + | ~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 76%] Linking CXX executable ../bin/levelset +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/levelset.dir/link.d CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 76%] Built target levelset +make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o +[ 76%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -MF CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o.d -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_nifti_hdr.cxx -[ 82%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -MF CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o.d -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_analyze_hdr.cxx -[ 82%] Linking CXX executable ../bin/fit_spline_dfield -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/convertx.dir/link.d CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 76%] Linking CXX executable ../bin/fit_affine_dfield +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 +[ 77%] Linking CXX executable ../bin/hausdorff +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_affine_dfield.dir/link.d CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 82%] Built target convertx +[ 77%] Built target fit_affine_dfield make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o +[ 77%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -MF CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o.d -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_spline_dfield.dir/link.d CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 77%] Linking CXX executable ../bin/dof2mat +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/hausdorff.dir/link.d CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory 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'/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o +[ 77%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mrbias.dir/mrbias.cxx.o -MF CMakeFiles/mrbias.dir/mrbias.cxx.o.d -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mrbias.cxx -[ 82%] Linking CXX executable ../bin/groupwise_affine -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/groupwise_affine.dir/link.d CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dof2mat.dir/link.d CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 82%] Built target groupwise_affine +[ 77%] Built target dof2mat make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 83%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o +[ 78%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/overlap.dir/overlap.cxx.o -MF CMakeFiles/overlap.dir/overlap.cxx.o.d -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/overlap.cxx -[ 83%] Linking CXX executable ../bin/gregxform -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:192:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 192 | std::auto_ptr fileformat( new DcmFileFormat ); - | ^~~~~~~~ -In file included from /usr/include/c++/14/memory:78, - from /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:46: -/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here - 59 | template class auto_ptr; - | ^~~~~~~~ -[ 83%] Linking CXX executable ../bin/film -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 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../bin/fit_affine_xform_landmarks +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 +[ 78%] Linking CXX executable ../bin/asegment +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_affine_xform_landmarks.dir/link.d CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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/build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 83%] Linking CXX executable ../bin/glm -[ 83%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 +[ 78%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/probe.dir/probe.cxx.o -MF CMakeFiles/probe.dir/probe.cxx.o.d -o CMakeFiles/probe.dir/probe.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/probe.cxx -[ 83%] Linking CXX executable ../bin/fit_spline_xform -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 -[ 83%] Linking CXX executable ../bin/interleaved_bad_slices -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 -[ 84%] Linking CXX executable ../bin/gmm -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 -[ 84%] Linking CXX executable ../bin/histogram -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/glm.dir/link.d CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_spline_xform.dir/link.d CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 84%] Built target glm +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/asegment.dir/link.d CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 78%] Built target asegment make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake "--color=" -[ 84%] Built target fit_spline_xform -make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake "--color=" +[ 78%] Linking CXX executable ../bin/convert_warp +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/film.dir/link.d CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 79%] Linking CXX executable ../bin/concat_affine +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 +[ 79%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o -MF CMakeFiles/pxsearch.dir/pxsearch.cxx.o.d -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/pxsearch.cxx +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/convert_warp.dir/link.d CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 79%] Built target convert_warp +make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/concat_affine.dir/link.d CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 84%] Built target film +[ 79%] Linking CXX executable ../bin/average_affine +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 +[ 80%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/reformatx.dir/reformatx.cxx.o -MF CMakeFiles/reformatx.dir/reformatx.cxx.o.d -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/reformatx.cxx +[ 80%] Built target concat_affine make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake "--color=" -[ 84%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o -MF CMakeFiles/pxsearch.dir/pxsearch.cxx.o.d -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/pxsearch.cxx -[ 85%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/reformatx.dir/reformatx.cxx.o -MF CMakeFiles/reformatx.dir/reformatx.cxx.o.d -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/reformatx.cxx +[ 80%] Linking CXX executable ../bin/geomatch +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/histogram.dir/link.d CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 85%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 80%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/registration.dir/registration.cxx.o -MF CMakeFiles/registration.dir/registration.cxx.o.d -o CMakeFiles/registration.dir/registration.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/registration.cxx -[ 85%] Built target histogram +[ 81%] Linking CXX executable ../bin/average_labels +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:192:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 192 | std::auto_ptr fileformat( new DcmFileFormat ); + | ^~~~~~~~ +In file included from /usr/include/c++/14/memory:78, + from /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:46: +/usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here + 59 | template class auto_ptr; + | ^~~~~~~~ +[ 81%] Linking CXX executable ../bin/mk_adni_phantom +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_affine.dir/link.d CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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'/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake "--color=" -[ 85%] Linking CXX executable ../bin/lsba -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/interleaved_bad_slices.dir/link.d CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 85%] Built target interleaved_bad_slices -make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend -[ 85%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/geomatch.dir/link.d CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 81%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/registrationx.dir/registrationx.cxx.o -MF CMakeFiles/registrationx.dir/registrationx.cxx.o.d -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/registrationx.cxx +[ 81%] Linking CXX executable ../bin/fib2image +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 +[ 81%] Built target geomatch +make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake "--color=" +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_labels.dir/link.d CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 85%] Linking CXX executable ../bin/lmsba -cd 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/regress.dir/regress.cxx.o -MF CMakeFiles/regress.dir/regress.cxx.o.d -o CMakeFiles/regress.dir/regress.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/regress.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/lsba.dir/link.d CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 85%] Built target lsba +[ 81%] Built target average_labels make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake "--color=" -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/gmm.dir/link.d CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 81%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/regress.dir/regress.cxx.o -MF CMakeFiles/regress.dir/regress.cxx.o.d -o CMakeFiles/regress.dir/regress.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/regress.cxx make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 85%] Built target gmm -make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend -[ 85%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o +[ 81%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/reorient.dir/reorient.cxx.o -MF CMakeFiles/reorient.dir/reorient.cxx.o.d -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/reorient.cxx +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_adni_phantom.dir/link.d CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 81%] Built target mk_adni_phantom +make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake "--color=" +[ 81%] Linking CXX executable ../bin/gregxform +cd 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'/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake "--color=" +[ 82%] Linking CXX executable ../bin/lsba +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build +[ 83%] Linking CXX executable ../bin/mat2dof make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 86%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 +[ 83%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sbai.dir/sbai.cxx.o -MF CMakeFiles/sbai.dir/sbai.cxx.o.d -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/sbai.cxx -[ 86%] Linking CXX executable ../bin/lvote -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 -[ 87%] Linking CXX executable ../bin/mk_nifti_hdr -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/lvote.dir/link.d CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fib2image.dir/link.d CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 87%] Built target lvote +[ 83%] Built target fib2image make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 87%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o +[ 84%] Linking CXX executable ../bin/filter +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 +[ 84%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sequence.dir/sequence.cxx.o -MF CMakeFiles/sequence.dir/sequence.cxx.o.d -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/sequence.cxx -[ 87%] Linking CXX executable ../bin/registration -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_nifti_hdr.dir/link.d 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-lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/lsba.dir/link.d CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 88%] Linking CXX executable ../bin/make_initial_affine -[ 88%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB 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/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/similarity.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/registration.dir/link.d CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 88%] Linking CXX executable ../bin/imagemath -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 -[ 88%] Built target registration +[ 84%] Built target lsba +[ 84%] Built target mat2dof make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend +make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/statistics.dir/statistics.cxx.o -MF CMakeFiles/statistics.dir/statistics.cxx.o.d -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/statistics.cxx +[ 85%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/split.dir/split.cxx.o -MF CMakeFiles/split.dir/split.cxx.o.d -o CMakeFiles/split.dir/split.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/split.cxx -[ 88%] Linking CXX executable ../bin/mk_adni_phantom -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_phantom_3d.dir/link.d CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 +[ 85%] Linking CXX executable ../bin/lvote +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 +[ 85%] Linking CXX executable ../bin/fit_spline_dfield +[ 85%] Linking CXX executable ../bin/groupwise_init +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 +[ 85%] Linking CXX executable ../bin/lmsba +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/filter.dir/link.d CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 88%] Built target mk_phantom_3d -make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/make_initial_affine.dir/link.d CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake "--color=" -[ 89%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/statistics.dir/statistics.cxx.o -MF CMakeFiles/statistics.dir/statistics.cxx.o.d -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/statistics.cxx -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/registrationx.dir/link.d CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 89%] Built target registrationx +[ 85%] Built target make_initial_affine +[ 85%] Linking CXX executable ../bin/fit_affine_xform make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake "--color=" -[ 89%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -MF CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o.d -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/stream_pixels.cxx -[ 90%] Linking CXX executable ../bin/mat2dof -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/imagemath.dir/link.d CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 85%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -MF CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o.d -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/stream_pixels.cxx make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 90%] Built target imagemath -make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend -[ 90%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o +[ 85%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/streamxform.dir/streamxform.cxx.o -MF CMakeFiles/streamxform.dir/streamxform.cxx.o.d -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/streamxform.cxx +[ 85%] Linking CXX executable ../bin/fibxform +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/destripe.dir/link.d CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 85%] Built target destripe +make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake "--color=" -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_adni_phantom.dir/link.d CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_analyze_hdr.dir/link.d CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 90%] Built target mk_adni_phantom -[ 90%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_spline_dfield.dir/link.d CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/lvote.dir/link.d CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 85%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg 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../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/lmsba.dir/link.d CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build -[ 90%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG 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-ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 86%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 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-Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fibxform.dir/link.d CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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-I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/unsplit.dir/unsplit.cxx.o -MF CMakeFiles/unsplit.dir/unsplit.cxx.o.d -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/unsplit.cxx -[ 91%] Linking CXX executable ../bin/jidb -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 -[ 91%] Linking CXX executable ../bin/reorient -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/jidb.dir/link.d CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Built target jidb +[ 86%] Built target fibxform +[ 86%] Built target groupwise_init make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend +make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend +[ 86%] Built target lvote +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build +make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -MF CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o.d -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/unwarp_image_phantom.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/reorient.dir/link.d CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Built target reorient -make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o -MF CMakeFiles/vol2csv.dir/vol2csv.cxx.o.d -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vol2csv.cxx -[ 91%] Linking CXX executable ../bin/symplx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/symplx.dir/link.d CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Built target symplx -make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o +[ 86%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o +[ 86%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -MF CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o.d -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/unwarp_image_phantom.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o -MF CMakeFiles/vol2csv.dir/vol2csv.cxx.o.d -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vol2csv.cxx +[ 86%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o -MF CMakeFiles/volume_injection.dir/volume_injection.cxx.o.d -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/volume_injection.cxx -[ 91%] Linking CXX executable ../bin/overlap -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 -[ 91%] Linking CXX executable ../bin/sba -cd 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-ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 86%] Linking CXX executable ../bin/histogram +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 +[ 86%] Linking CXX executable ../bin/fit_spline_xform +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 +[ 86%] Linking CXX executable ../bin/average_images +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/histogram.dir/link.d CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 91%] Built target overlap +[ 86%] Built target histogram make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake "--color=" -[ 91%] Linking CXX executable ../bin/pxsearch -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o +[ 87%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -MF CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o.d -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/volume_reconstruction.cxx -[ 92%] Linking CXX executable ../bin/mrbias -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/pxsearch.dir/link.d CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 88%] Linking CXX executable ../bin/describe +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/fit_spline_xform.dir/link.d CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Built target pxsearch +[ 88%] Built target fit_spline_xform make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake "--color=" -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sba.dir/link.d CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 88%] Linking CXX executable ../bin/registration +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Built target sba -make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend +make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 88%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o -MF CMakeFiles/vtkxform.dir/vtkxform.cxx.o.d -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/average_images.dir/link.d CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 88%] Built target average_images +make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake "--color=" -make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 88%] Linking CXX executable ../bin/interleaved_bad_slices +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o -MF CMakeFiles/vtkxform.dir/vtkxform.cxx.o.d -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx -[ 92%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o +[ 89%] Linking CXX executable ../bin/gmm +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 +[ 89%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warp.dir/warp.cxx.o -MF CMakeFiles/warp.dir/warp.cxx.o.d -o CMakeFiles/warp.dir/warp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/warp.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mrbias.dir/link.d CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 89%] Linking CXX executable ../bin/epiunwarp +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/describe.dir/link.d CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Built target mrbias +[ 89%] Built target describe make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 92%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o +[ 89%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warpx.dir/warpx.cxx.o -MF CMakeFiles/warpx.dir/warpx.cxx.o.d -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/warpx.cxx -[ 93%] Linking CXX executable ../bin/sequence -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx: In function 'int doMain(int, const char**)': -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](0)' from 'double' to 'float' [-Wnarrowing] - 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; - | ^ -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing] -/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing] -[ 93%] Linking CXX executable ../bin/sbai -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sequence.dir/link.d CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/registration.dir/link.d CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 93%] Built target sequence +[ 90%] Linking CXX executable ../bin/registrationx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 +[ 90%] Built target registration make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 93%] Linking CXX executable ../bin/stream_pixels -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 -[ 93%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o +[ 90%] Linking CXX executable ../bin/avg_adm +[ 91%] Linking CXX executable ../bin/dwi_mask_bad_slices +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 +[ 91%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o -MF CMakeFiles/warp2ps.dir/warp2ps.cxx.o.d -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/warp2ps.cxx -[ 93%] Linking CXX executable ../bin/probe -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sbai.dir/link.d CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/gmm.dir/link.d CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/interleaved_bad_slices.dir/link.d CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 93%] Built target sbai +[ 91%] Built target gmm +[ 91%] Built target interleaved_bad_slices make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend +make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' 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../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 94%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -MF CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o.d -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/xform2dfield.cxx -[ 94%] Built target stream_pixels -make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg 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-I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o -MF CMakeFiles/xform2itk.dir/xform2itk.cxx.o.d -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/xform2itk.cxx -[ 94%] Linking CXX executable ../bin/similarity -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 -[ 94%] Linking CXX executable ../bin/split -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/probe.dir/link.d CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/epiunwarp.dir/link.d CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 95%] Linking CXX executable ../bin/warp -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 -[ 95%] Built target probe +[ 91%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o -MF CMakeFiles/xform2itk.dir/xform2itk.cxx.o.d -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/xform2itk.cxx +[ 92%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -MF CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o.d -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/xform2dfield.cxx +[ 92%] Built target epiunwarp make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend +[ 92%] Linking CXX executable ../bin/glm make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 95%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage 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--verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/similarity.dir/link.d CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 96%] Linking CXX executable ../bin/streamxform -[ 96%] Linking CXX executable ../bin/warpx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 -[ 96%] Linking CXX executable ../bin/statistics +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/registrationx.dir/link.d CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 -[ 96%] Built target similarity +[ 92%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB 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/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/xform2scalar.cxx +[ 92%] Built target registrationx make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/split.dir/link.d CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory 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../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o +[ 93%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dbtool.dir/dbtool.cxx.o -MF CMakeFiles/dbtool.dir/dbtool.cxx.o.d -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dbtool.cxx -[ 97%] Built target split +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dwi_mask_bad_slices.dir/link.d CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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-L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 93%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 93%] Built target avg_adm cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake "--color=" -[ 97%] Linking CXX executable ../bin/regress -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 +make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend +make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 94%] Linking CXX executable ../bin/mk_nifti_hdr +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg 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-Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/unsplit.dir/link.d CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 97%] Built target warp make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -MF CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o.d -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/asegment_sri24.cxx +make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake "--color=" -[ 97%] Built target unsplit +[ 94%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o +[ 94%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -MF CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o.d -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/asegment_sri24.cxx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o -MF CMakeFiles/mcaffine.dir/mcaffine.cxx.o.d -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mcaffine.cxx +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/glm.dir/link.d CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 94%] Built target glm make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build -make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/streamxform.dir/link.d CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o -MF CMakeFiles/mcaffine.dir/mcaffine.cxx.o.d -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mcaffine.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/warpx.dir/link.d CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o +[ 94%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o -MF CMakeFiles/mcwarp.dir/mcwarp.cxx.o.d -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/mcwarp.cxx -[ 97%] Built target warpx +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_nifti_hdr.dir/link.d CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 94%] Built target mk_nifti_hdr make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Built target streamxform -make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/statistics.dir/link.d CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 94%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o -MF CMakeFiles/dcm2image.dir/dcm2image.cxx.o.d -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx +[ 94%] Linking CXX executable ../bin/symplx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/symplx.dir/link.d CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx: In function 'int doMain(int, const char**)': +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](0)' from 'double' to 'float' [-Wnarrowing] + 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; + | ^ +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing] +/build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::cmtk::FixedArray<3, double>.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing] +[ 94%] Built target symplx +make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o -MF CMakeFiles/dcm2image.dir/dcm2image.cxx.o.d -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 98%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -[ 98%] Built target statistics +[ 95%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -MF CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o.d -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/detect_spheres_matched_filter.cxx +[ 95%] Linking CXX executable ../bin/imagemath +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/warp +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/overlap +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/reorient +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/warpx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/warp.dir/link.d CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/imagemath.dir/link.d CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 96%] Built target imagemath make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cmtk-3.3.1p2+dfsg /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 98%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -MF CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o.d -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/detect_adni_phantom.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/regress.dir/link.d CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 98%] Linking CXX executable ../bin/ttest -[ 98%] Built target regress -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 -[ 99%] Linking CXX executable ../bin/unwarp_image_phantom -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/ttest.dir/link.d CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target ttest -[ 99%] Linking CXX executable ../bin/sympl -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/unwarp_image_phantom.dir/link.d CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/overlap.dir/link.d CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 96%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Linking CXX executable ../bin/vtkxform -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 -[ 99%] Built target unwarp_image_phantom +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/reproducible-path/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -MF CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o.d -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/detect_adni_phantom.cxx +[ 96%] Built target warp +[ 96%] Built target overlap In file included from /build/reproducible-path/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /build/reproducible-path/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; @@ -3370,69 +3291,184 @@ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sympl.dir/link.d CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/reorient.dir/link.d CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/warpx.dir/link.d CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/vtkxform.dir/link.d CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 99%] Built target sympl make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Linking CXX executable ../bin/vol2csv -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 -[ 99%] Built target vtkxform -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/vol2csv.dir/link.d CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 96%] Built target reorient +[ 96%] Built target warpx +[ 96%] Linking CXX executable ../bin/groupwise_warp +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/jidb +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/convertx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/pxsearch +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 +[ 96%] Linking CXX executable ../bin/mk_phantom_3d +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/groupwise_warp.dir/link.d CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target vol2csv -[ 99%] Linking CXX executable ../bin/dbtool +[ 96%] Built target groupwise_warp +[ 96%] Linking CXX executable ../bin/groupwise_affine +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/jidb.dir/link.d CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 96%] Built target jidb +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/convertx.dir/link.d CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/pxsearch.dir/link.d CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 96%] Built target convertx +[ 96%] Built target pxsearch +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mk_phantom_3d.dir/link.d CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 96%] Built target mk_phantom_3d +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/groupwise_affine.dir/link.d CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 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../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Built target sequence +[ 97%] Linking CXX executable ../bin/film +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/stream_pixels +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/sba +cd 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-ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/film.dir/link.d CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so 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../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Built target stream_pixels +[ 97%] Built target film +[ 97%] Built target sba +[ 97%] Linking CXX executable ../bin/regress +[ 97%] Linking CXX executable ../bin/probe +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/dbtool cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 -[ 99%] Linking CXX executable ../bin/reformatx -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/regress.dir/link.d CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Built target regress +[ 97%] Linking CXX executable ../bin/unsplit +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/probe.dir/link.d CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Built target probe /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dbtool.dir/link.d CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target dbtool -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/reformatx.dir/link.d CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 97%] Built target dbtool +[ 97%] Linking CXX executable ../bin/sbai +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/similarity +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/split +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/unsplit.dir/link.d CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target reformatx -[ 99%] Linking CXX executable ../bin/warp2ps -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 -[ 99%] Linking CXX executable ../bin/xform2itk +[ 97%] Linking CXX executable ../bin/mrbias +[ 97%] Built target unsplit +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 +[ 97%] Linking CXX executable ../bin/xform2itk cd 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-ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sbai.dir/link.d CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Built target sbai +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/split.dir/link.d CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 97%] Linking CXX executable ../bin/statistics +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 +[ 97%] Built target split +[ 98%] Linking CXX executable ../bin/streamxform +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/similarity.dir/link.d CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 98%] Built target similarity /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/xform2itk.dir/link.d CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target warp2ps -[ 99%] Built target xform2itk -[ 99%] Linking CXX executable ../bin/detect_spheres_matched_filter -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 -[ 99%] Linking CXX executable ../bin/volume_injection -[ 99%] Linking CXX executable ../bin/xform2dfield +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/mrbias.dir/link.d CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 98%] Built target xform2itk +[ 98%] Built target mrbias +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/statistics.dir/link.d CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/streamxform.dir/link.d CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 98%] Built target statistics +[ 98%] Built target streamxform +[ 98%] Linking CXX executable ../bin/ttest +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 +[ 98%] Linking CXX executable ../bin/vtkxform +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/ttest.dir/link.d CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 98%] Built target ttest +[ 98%] Linking CXX executable ../bin/volume_injection cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/detect_spheres_matched_filter.dir/link.d CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/vtkxform.dir/link.d CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[ 98%] Built target vtkxform +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/volume_injection.dir/link.d CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target detect_spheres_matched_filter -[ 99%] Linking CXX executable ../bin/asegment_sri24 +[ 99%] Linking CXX executable ../bin/vol2csv +[ 99%] Linking CXX executable ../bin/xform2scalar +[100%] Linking CXX executable ../bin/unwarp_image_phantom +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 +[100%] Linking CXX executable ../bin/asegment_sri24 +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/xform2dfield.dir/link.d CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[100%] Built target volume_injection +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/unwarp_image_phantom.dir/link.d CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/volume_injection.dir/link.d CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/vol2csv.dir/link.d CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[100%] Linking CXX executable ../bin/sympl +[100%] Built target unwarp_image_phantom +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/xform2scalar.dir/link.d CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target xform2dfield -[ 99%] Built target volume_injection +[100%] Built target vol2csv +[100%] Linking CXX executable ../bin/detect_spheres_matched_filter +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/asegment_sri24.dir/link.d CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[ 99%] Built target asegment_sri24 -[ 99%] Linking CXX executable ../bin/detect_adni_phantom +[100%] Built target xform2scalar +[100%] Built target asegment_sri24 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/sympl.dir/link.d CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/detect_spheres_matched_filter.dir/link.d CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[100%] Built target sympl +[100%] Built target detect_spheres_matched_filter +[100%] Linking CXX executable ../bin/warp2ps +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 +[100%] Linking CXX executable ../bin/xform2dfield +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/xform2dfield.dir/link.d CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[100%] Built target xform2dfield +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/warp2ps.dir/link.d CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[100%] Built target warp2ps +[100%] Linking CXX executable ../bin/detect_adni_phantom cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 -[100%] Linking CXX executable ../bin/xform2scalar -cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/detect_adni_phantom.dir/link.d CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target detect_adni_phantom -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/xform2scalar.dir/link.d CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' -[100%] Built target xform2scalar +[100%] Linking CXX executable ../bin/reformatx +cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 [100%] Linking CXX executable ../bin/dcm2image cd /build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/reformatx.dir/link.d CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' +[100%] Built target reformatx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic -Wl,--dependency-file=CMakeFiles/dcm2image.dir/link.d CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target dcm2image @@ -3459,10 +3495,10 @@ make[1]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg' export ARGS="--verbose" xvfb-run --auto-servernum --server-num=20 dh_auto_test - cd obj-x86_64-linux-gnu && make -j20 test ARGS\+=--verbose ARGS\+=-j20 + cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j20 +/usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Add coverage exclude regular expressions. Add coverage exclude: .*/Utilities/.* @@ -3477,7 +3513,7 @@ Connected to MAKE jobserver No tests were found!!! make[2]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' - rm -fr -- /tmp/dh-xdg-rundir-5zNiglTt + rm -fr -- /tmp/dh-xdg-rundir-TgPqOSAx make[1]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg' create-stamp debian/debhelper-build-stamp dh_prep @@ -3490,7 +3526,7 @@ make[1]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg' dh_auto_install install -m0755 -d /build/reproducible-path/cmtk-3.3.1p2\+dfsg/debian/cmtk - cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/cmtk-3.3.1p2\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/cmtk-3.3.1p2\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/cmtk-3.3.1p2+dfsg -B/build/reproducible-path/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -3503,15 +3539,15 @@ -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses --- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib --- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff --- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO +-- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk --- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 +-- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk --- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml +-- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff +-- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib +-- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h @@ -4143,15 +4179,15 @@ xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu -/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: cannot open /usr/lib/cmtk/bin/cmtk_locking.sh: No such file +/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: line 37: /usr/lib/cmtk/bin/cmtk_locking.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED -/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED -/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED -/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED -/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/reproducible-path/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED @@ -4348,125 +4384,149 @@ install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -m0755 -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 - mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 - mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 - mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 - mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 - mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk.1 + mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk.1 + mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 + mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 - mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 + mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 + mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 + mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 + mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 + mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 + mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 + mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 + mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 + mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 + mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 + mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 + mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 + mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 + mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 + mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 + mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 + mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 + mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 + mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 + mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 + mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 + mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 - mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 - mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 - mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 + mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 + mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 + mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 + mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 + mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 + mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 - mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 + mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 + mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 + mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 - mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 - mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 - mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 - mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 - mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 - mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 - mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 - mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 + mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 + mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 + mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 - mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 - mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 - mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 - mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 - mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 - mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 - mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 - mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 - mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 - mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 - mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 - mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 - mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 - mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 - mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 - mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 - mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 - mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 - mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 - mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 - mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 make[1]: Leaving directory '/build/reproducible-path/cmtk-3.3.1p2+dfsg' dh_perl dh_link @@ -4492,466 +4552,466 @@ objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug chmod 0644 -- debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug dh_strip -a - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/9b3deab83c93780262e53d8328ab91a2acb71d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/9b3deab83c93780262e53d8328ab91a2acb71d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/9b3deab83c93780262e53d8328ab91a2acb71d.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/8e144181d1e7056d6dad4857e7607603ed2d61.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/8e144181d1e7056d6dad4857e7607603ed2d61.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/8e144181d1e7056d6dad4857e7607603ed2d61.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/a5b4f5b9a01ce2b927d6e270342a293130856a.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/605dc0e2264100f77ca96e36ce4d9915e9b9a8.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/31 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/31/1871cae7f9d8ea7ddbc42a585d47d174446ff7.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/31/1871cae7f9d8ea7ddbc42a585d47d174446ff7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/31/1871cae7f9d8ea7ddbc42a585d47d174446ff7.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug debian/cmtk/usr/lib/cmtk/bin/histogram - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug debian/cmtk/usr/lib/cmtk/bin/asegment - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug debian/cmtk/usr/lib/cmtk/bin/warp - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/a5ad14d323da7edf9425a3d5766ea964eb5943.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7/aa04180535fefc1e44b86900755076f889e58c.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8b/c6029b58822641cd208cf2ee88e749030013cf.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/f106e4a19522e7e90d618d572ffb7847baf5ae.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug debian/cmtk/usr/lib/cmtk/bin/lsba + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug debian/cmtk/usr/lib/cmtk/bin/mrbias + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug debian/cmtk/usr/lib/cmtk/bin/imagemath + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug debian/cmtk/usr/lib/cmtk/bin/gregxform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sequence + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug debian/cmtk/usr/lib/cmtk/bin/sequence + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug debian/cmtk/usr/lib/cmtk/bin/probe install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/498f5e253a5c6e085ce3f25aeda91b2a80932e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/498f5e253a5c6e085ce3f25aeda91b2a80932e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/498f5e253a5c6e085ce3f25aeda91b2a80932e.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug debian/cmtk/usr/lib/cmtk/bin/levelset + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_injection + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/symplx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/c916c8205526b727e42a4811e1b995b5d709ff.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/c916c8205526b727e42a4811e1b995b5d709ff.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/symplx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/c916c8205526b727e42a4811e1b995b5d709ff.debug debian/cmtk/usr/lib/cmtk/bin/symplx - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/similarity debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/similarity - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug debian/cmtk/usr/lib/cmtk/bin/similarity - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vol2csv - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug debian/cmtk/usr/lib/cmtk/bin/vol2csv - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/90053f10298a6acdd0fd89c30bf65a3feb4e58.debug debian/cmtk/usr/lib/cmtk/bin/imagemath + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3a/c2395a74fd941005a2903e408cb863b75e0138.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3a/c2395a74fd941005a2903e408cb863b75e0138.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3a/c2395a74fd941005a2903e408cb863b75e0138.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug debian/cmtk/usr/lib/cmtk/bin/dbtool + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/bc9935f51183e5c918a30bb16da7763b71a0b5.debug debian/cmtk/usr/lib/cmtk/bin/histogram + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unsplit debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/c40419cdf91c5394c45762f76170451bfced52.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/c40419cdf91c5394c45762f76170451bfced52.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unsplit objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/c40419cdf91c5394c45762f76170451bfced52.debug debian/cmtk/usr/lib/cmtk/bin/unsplit - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug debian/cmtk/usr/lib/cmtk/bin/average_images - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/351c3904509328ebc04b61df8f2c8d5a14b36a.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/cc75b5c9d771684033f21e5ed6309c28aed1e0.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug debian/cmtk/usr/lib/cmtk/bin/destripe - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sbai debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sbai - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug debian/cmtk/usr/lib/cmtk/bin/sbai - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/d0bb624e5448771e8eb01adbd27b96576c583a.debug debian/cmtk/usr/lib/cmtk/bin/mrbias - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug debian/cmtk/usr/lib/cmtk/bin/registrationx - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug debian/cmtk/usr/lib/cmtk/bin/overlap - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug debian/cmtk/usr/lib/cmtk/bin/warpx install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/a041d5254428d088eb392a2768f8c2b82c22e5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/a041d5254428d088eb392a2768f8c2b82c22e5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/a041d5254428d088eb392a2768f8c2b82c22e5.debug debian/cmtk/usr/lib/cmtk/bin/describe - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug debian/cmtk/usr/lib/cmtk/bin/jidb - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug debian/cmtk/usr/lib/cmtk/bin/sba - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/6952ed7afe445c1611b2ad7e8964bd72843d40.debug debian/cmtk/usr/lib/cmtk/bin/gregxform - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug debian/cmtk/usr/lib/cmtk/bin/film - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/79e29c68cd8df7003355b69f47d097eb3407b0.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug debian/cmtk/usr/lib/cmtk/bin/convertx + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/e19734a56e60f0d97e3b393c7076927daef4f3.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/e358400bf41d53256328e95c08dc8c3717ebc6.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/e358400bf41d53256328e95c08dc8c3717ebc6.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_init objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/e358400bf41d53256328e95c08dc8c3717ebc6.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_init - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug debian/cmtk/usr/lib/cmtk/bin/registration + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/4ebbe6456af9391ac8346282537b99ae1aa973.debug debian/cmtk/usr/lib/cmtk/bin/overlap + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug debian/cmtk/usr/lib/cmtk/bin/geomatch + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug debian/cmtk/usr/lib/cmtk/bin/regress install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_labels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/b7c6a1006fdae783bf6d2912b82d28600124af.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/b7c6a1006fdae783bf6d2912b82d28600124af.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_labels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/b7c6a1006fdae783bf6d2912b82d28600124af.debug debian/cmtk/usr/lib/cmtk/bin/average_labels - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug debian/cmtk/usr/lib/cmtk/bin/average_affine - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug debian/cmtk/usr/lib/cmtk/bin/lvote - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug debian/cmtk/usr/lib/cmtk/bin/reformatx + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/fdfbd254fabfbd59c5f71e18b4c53aea9dbf7b.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/70/1c261d8ad0b4b6daddcebc90c08469a93135c3.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f8/3d564a75dc95050690a1f302c820c627703456.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/6613bd4c1ff7bcd2c6000d64df331552ae42ad.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/6613bd4c1ff7bcd2c6000d64df331552ae42ad.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ad/6613bd4c1ff7bcd2c6000d64df331552ae42ad.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug debian/cmtk/usr/lib/cmtk/bin/lmsba - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f1/091d3d57d464b12326abda328c4b660a837a45.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reorient debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reorient - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug debian/cmtk/usr/lib/cmtk/bin/reorient - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_injection - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/4df661b29ae1f4e49da1917270ead13015e947.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug debian/cmtk/usr/lib/cmtk/bin/fib2image + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0d/bfe40b8dbe0dd9464cb1e0954c6393c3b3592a.debug debian/cmtk/usr/lib/cmtk/bin/average_affine + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/30/6336e8b59dedeb33fd2238b52b88274c3c940a.debug debian/cmtk/usr/lib/cmtk/bin/sba + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug debian/cmtk/usr/lib/cmtk/bin/streamxform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6b/a211da52972045cbd28e708b560e2cd8c61642.debug debian/cmtk/usr/lib/cmtk/bin/registration + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b9/26744d61520201900bbeeed0a950ef2e1c2e1a.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/d9760bb134520b949521795d36792f1f318761.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/456647c1cf21fe95887502823cc52086d49e5c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/456647c1cf21fe95887502823cc52086d49e5c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/filter objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/456647c1cf21fe95887502823cc52086d49e5c.debug debian/cmtk/usr/lib/cmtk/bin/filter - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/glm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/glm - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug debian/cmtk/usr/lib/cmtk/bin/glm - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug debian/cmtk/usr/lib/cmtk/bin/sympl - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/cf69789aad6d201d524f15d08c9a3a293746f4.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dcfa872a91f5a54ba19e3b1f0967a0b991890d.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/69/55ca50fb4b614c0bdd753e4c497f5d7750ac4f.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/496c558c387cf1890b70294d68cf3f909428cc.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/496c558c387cf1890b70294d68cf3f909428cc.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/496c558c387cf1890b70294d68cf3f909428cc.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reorient debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reorient + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/eaf5f398150776d6dccb968655051667ad4c83.debug debian/cmtk/usr/lib/cmtk/bin/reorient + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/e4ab92b6996b436304505cc80ae7812189f710.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug debian/cmtk/usr/lib/cmtk/bin/gmm + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/similarity debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/similarity + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/0101df4fb0078d35a851c2f81e8d4f02c71e58.debug debian/cmtk/usr/lib/cmtk/bin/similarity + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/680fcfae7a66d3e450399a78a8e51e17d9c83e.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/11/f0a230fba45e49e064e1903319355ff25401b2.debug debian/cmtk/usr/lib/cmtk/bin/average_images + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/2da219af30acab4b4e42c36a6647049c1199ad.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/222e24bd24e4355c4218c1a05e459a2f75f281.debug debian/cmtk/usr/lib/cmtk/bin/levelset + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug debian/cmtk/usr/lib/cmtk/bin/fibxform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3d/9b8fad0234d1f7a1f42c044e3b8304ad91b7c4.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/c20bdf2238094e91aadbbe00016969dfe0e46d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/c20bdf2238094e91aadbbe00016969dfe0e46d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3b/c20bdf2238094e91aadbbe00016969dfe0e46d.debug debian/cmtk/usr/lib/cmtk/bin/ttest + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/115156959f4cc4753d4b0b7e574968653df670.debug debian/cmtk/usr/lib/cmtk/bin/sympl + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/9009be3a9054c279737aecfe6b90bfc907dd0b.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/split debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/split - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug debian/cmtk/usr/lib/cmtk/bin/split - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/33a879c4663f97d26489f2bb46c5f1b21e00c6.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/16/da99b2b981caac79db3d91647f00adf553dded.debug debian/cmtk/usr/lib/cmtk/bin/convertx - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/fb910f3025eb09709ce01c93abf8c190f2af13.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/c3a44ad8724579594f287279131cafabaabd7a.debug debian/cmtk/usr/lib/cmtk/bin/gmm - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/721c1fe6acec744d032c2c18ce45643e3ac130.debug debian/cmtk/usr/lib/cmtk/bin/dbtool - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2f/4d6ce345aedd3ce8a7986156d0fe14cf88cb1a.debug debian/cmtk/usr/lib/cmtk/bin/streamxform - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/b01d8e394f183bfd1e0ee98153b3e9ac3437cf.debug debian/cmtk/usr/lib/cmtk/bin/regress - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/f5bb6805275b6efcdc8a0d01b32f48c596e0b2.debug debian/cmtk/usr/lib/cmtk/bin/jidb + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/cfea006a3240ca8b6d80bdcb446d85ade0afe7.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/glm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/glm + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/49/0779f4492836b14257a59e8c2e02c4cb0cbd29.debug debian/cmtk/usr/lib/cmtk/bin/glm + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/33d640ac7164991b460b3c848ac514c6262a43.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5e/498e48659da7a21933008ffba69440a60cd3bf.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/statistics debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7c/cca8708f37ebd12973e3e170ad6088617bbf76.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7c/cca8708f37ebd12973e3e170ad6088617bbf76.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/statistics objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7c/cca8708f37ebd12973e3e170ad6088617bbf76.debug debian/cmtk/usr/lib/cmtk/bin/statistics - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/1bce6a9bcbe591654259dee843fb14362e7b41.debug debian/cmtk/usr/lib/cmtk/bin/lsba + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sbai debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sbai + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/d8c6b4b00c855063d3b499c97e5c6ca2d1e1d1.debug debian/cmtk/usr/lib/cmtk/bin/sbai + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/6af1f683da23a3d58856a9ea30ed31e8db6207.debug debian/cmtk/usr/lib/cmtk/bin/film + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/79cd9994cbebbbb9e296b1549a351228629812.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/93/d7ac02e205906673389b8d78ba5fc2bb95052d.debug debian/cmtk/usr/lib/cmtk/bin/warpx + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/78db41161bc7aa2a0c0cc786ca0a7b0c084789.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/62688470fecc37507cbf680ae3e0cf694575df.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/05bdb7d7bc6e2a58b3392c1d75fa1888c7b1d3.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/6acc6e67424c194bb5a4ff303c7ca3e169b98b.debug debian/cmtk/usr/lib/cmtk/bin/warp + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/45b3d0b4f12ca0e0e4d415c16b648e16dc4655.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/1d0b365d1363752ea683b4fa51110bcb67eccb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/1d0b365d1363752ea683b4fa51110bcb67eccb.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dof2mat objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/1d0b365d1363752ea683b4fa51110bcb67eccb.debug debian/cmtk/usr/lib/cmtk/bin/dof2mat - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/f29126fa1ee4c5682a43bd9d59cdd50a49c441.debug debian/cmtk/usr/lib/cmtk/bin/geomatch - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/82/80c24e312c2a1f91cbbd16955e5d08c2353afa.debug debian/cmtk/usr/lib/cmtk/bin/fibxform - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/61/6e3a70794750cc7170c18e1a983a82e0716014.debug debian/cmtk/usr/lib/cmtk/bin/fib2image - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d8/63a06f5bc59b2614de8286afe147d25d18e5af.debug debian/cmtk/usr/lib/cmtk/bin/probe - install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sequence - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/19/14ce2c3320c6613f013027cf12e296b824f024.debug debian/cmtk/usr/lib/cmtk/bin/sequence + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/53/1865547b4b1b7e841f0c7f9ada2182fc076cf6.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/split debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/split + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/d2ce4be34239e5fb1f234d047fb813d7f3026d.debug debian/cmtk/usr/lib/cmtk/bin/split + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/de/73143b5cb49e8e73a7f4add1a33bca24fd998a.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/e1b1988b7f97c5479f2eca6a568e5583fb5f4a.debug debian/cmtk/usr/lib/cmtk/bin/registrationx + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/5e1edd8dc862c30295bfb7e175013efb05a7c4.debug debian/cmtk/usr/lib/cmtk/bin/reformatx + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/0fefc36f367355e03f0477b02e35281f42c136.debug debian/cmtk/usr/lib/cmtk/bin/lmsba + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/93fd08a58c081195a7202d2e95f82c0cb3302c.debug debian/cmtk/usr/lib/cmtk/bin/destripe + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vol2csv + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/053b2ba22a0f4015f93b481b8e9b05b5000992.debug debian/cmtk/usr/lib/cmtk/bin/vol2csv + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/1343ca17d958a2e006b03cfade8db09c96c5a4.debug debian/cmtk/usr/lib/cmtk/bin/asegment + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/83/6aac9c719dba246e24724ef497eef8d7731bff.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield + install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/56b1ed508ebd215be09dd59fcbfc5ef41a6748.debug debian/cmtk/usr/lib/cmtk/bin/lvote install -m0755 -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz @@ -4963,9 +5023,7 @@ rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/cmtk/DEBIAN - dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/sequence -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' + dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/lvote dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -4974,16 +5032,18 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb install -m0755 -d debian/cmtk/DEBIAN find debian/cmtk/etc -type f -printf '/etc/%P @@ -5017,12 +5077,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/971891/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1124732 and its subdirectories -I: Current time: Sun Mar 2 17:18:21 -12 2025 -I: pbuilder-time-stamp: 1740979101 +I: removing directory /srv/workspace/pbuilder/971891 and its subdirectories +I: Current time: Mon Apr 6 01:44:26 +14 2026 +I: pbuilder-time-stamp: 1775389466