Diff of the two buildlogs: -- --- b1/build.log 2025-07-21 01:20:57.652252561 +0000 +++ b2/build.log 2025-07-21 02:33:16.369601148 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jul 20 12:25:29 -12 2025 -I: pbuilder-time-stamp: 1753057529 +I: Current time: Sun Aug 23 21:44:00 +14 2026 +I: pbuilder-time-stamp: 1787471040 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -38,51 +38,83 @@ dpkg-source: info: applying unpin_cffi.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3647552/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 23 07:44 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='270956f6567f4815b885c5719030b40a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3647552' - PS1='# ' - PS2='> ' + INVOCATION_ID=8a73859805f6429f995ed012ea041f5e + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2885300 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rkVYeLnK/pbuilderrc_09mv --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rkVYeLnK/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-7.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rkVYeLnK/pbuilderrc_A4m3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rkVYeLnK/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-7.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-37-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.33+deb12-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.33-1~bpo12+1 (2025-07-09) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3647552/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -847,7 +879,7 @@ Get: 599 http://deb.debian.org/debian trixie/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 600 http://deb.debian.org/debian trixie/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [29.7 kB] Get: 601 http://deb.debian.org/debian trixie/main amd64 python3-virtualenv all 20.31.2+ds-1 [72.8 kB] -Fetched 537 MB in 11s (48.3 MB/s) +Fetched 537 MB in 9s (59.3 MB/s) Preconfiguring packages ... Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) @@ -2753,8 +2785,8 @@ Setting up tzdata (2025b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Jul 21 00:29:52 UTC 2025. -Universal Time is now: Mon Jul 21 00:29:52 UTC 2025. +Local time is now: Sun Aug 23 07:48:23 UTC 2026. +Universal Time is now: Sun Aug 23 07:48:23 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-4.2) ... @@ -3340,7 +3372,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-7_source.changes +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-7_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-7 dpkg-buildpackage: info: source distribution unstable @@ -3486,7 +3522,7 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (3.1s) +-- Configuring done (4.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3621,7 +3657,7 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (3.1s) +-- Configuring done (5.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3642,7 +3678,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real - cd obj-x86_64-linux-gnu-real && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-real && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks @@ -3654,37 +3690,37 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o +[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o +[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-7\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o +[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp -[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o +[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC 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/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp -[ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -MF 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/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp +[ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -MF CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -MF CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/fem/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp [ 39%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o -MF CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp @@ -3718,10 +3754,10 @@ cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o -MF CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o.d -o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp [ 74%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/petsc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/la/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp -[ 76%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -MF 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o -MF CMakeFiles/dolfinx.dir/la/slepc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/slepc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp +[ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp [ 81%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp [ 83%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o @@ -3748,7 +3784,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex - cd obj-x86_64-linux-gnu-complex && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-complex && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks @@ -3760,38 +3796,38 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' -[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -[ 11%] Building 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o +[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o +[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-7\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp +[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp +[ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o +[ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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-D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem 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-DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -MF CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp [ 39%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o cd 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'/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4004,7 +4040,7 @@ * Building wheel... *** scikit-build-core 0.11.1 using CMake 3.31.6 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmp2cxas_2p/build/CMakeInit.txt +loading initial cache file /tmp/tmp61n2mcj0/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4059,24 +4095,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (1.7s) +-- Configuring done (5.4s) -- Generating done (0.0s) --- Build files have been written to: /tmp/tmp2cxas_2p/build +-- Build files have been written to: /tmp/tmp61n2mcj0/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmp2cxas_2p/build' +Change Dir: '/tmp/tmp61n2mcj0/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmp2cxas_2p/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp2cxas_2p/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmp2cxas_2p/build/CMakeFiles /tmp/tmp2cxas_2p/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp61n2mcj0/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp61n2mcj0/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmp61n2mcj0/build/CMakeFiles /tmp/tmp61n2mcj0/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmp2cxas_2p/build' +gmake[3]: Entering directory '/tmp/tmp61n2mcj0/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmp2cxas_2p/build' -cd /tmp/tmp2cxas_2p/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp2cxas_2p/build /tmp/tmp2cxas_2p/build /tmp/tmp2cxas_2p/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Entering directory '/tmp/tmp61n2mcj0/build' +cd /tmp/tmp61n2mcj0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp61n2mcj0/build /tmp/tmp61n2mcj0/build /tmp/tmp61n2mcj0/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp61n2mcj0/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Entering directory '/tmp/tmp61n2mcj0/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4104,14 +4140,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ft.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Leaving directory '/tmp/tmp61n2mcj0/build' [ 48%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmp2cxas_2p/build' -cd /tmp/tmp2cxas_2p/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp2cxas_2p/build /tmp/tmp2cxas_2p/build /tmp/tmp2cxas_2p/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Entering directory '/tmp/tmp61n2mcj0/build' +cd /tmp/tmp61n2mcj0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp61n2mcj0/build /tmp/tmp61n2mcj0/build /tmp/tmp61n2mcj0/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp61n2mcj0/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Entering directory '/tmp/tmp61n2mcj0/build' [ 52%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 56%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4139,16 +4175,16 @@ [100%] Linking CXX shared module cpp.cpython-313-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,--dependency-file=CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-313-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.15.2 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so -gmake[4]: Leaving directory '/tmp/tmp2cxas_2p/build' +gmake[4]: Leaving directory '/tmp/tmp61n2mcj0/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmp2cxas_2p/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmp2cxas_2p/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmp2cxas_2p/build' +gmake[3]: Leaving directory '/tmp/tmp61n2mcj0/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp61n2mcj0/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp61n2mcj0/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmp2cxas_2p/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmp2cxas_2p/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" +-- Installing: /tmp/tmp61n2mcj0/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp61n2mcj0/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl @@ -4280,8 +4316,8 @@ ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). - By 2026-Feb-18, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** @@ -4300,29 +4336,29 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -8.76s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -8.76s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -8.58s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -4.09s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -3.78s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -3.39s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_matrix_assembly_block_nl -3.36s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_block_nl -2.96s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -2.92s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] -2.55s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -2.42s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -2.30s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -2.13s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -2.05s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -2.02s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -1.99s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] -1.97s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -1.96s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] -1.90s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] -1.87s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] -= 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 9 warnings in 793.99s (0:13:13) = +13.58s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +9.72s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.42s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +5.02s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.66s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +4.29s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +4.15s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +3.96s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +3.70s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.32s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +3.31s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Lagrange-1-4] +3.10s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +3.09s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-1-4] +3.08s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.08s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] +3.08s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] +3.04s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Lagrange-1-4] +3.01s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +2.99s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +2.98s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] += 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 9 warnings in 1023.10s (0:17:03) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j16 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4486,7 +4522,7 @@ * Building wheel... *** scikit-build-core 0.11.1 using CMake 3.31.6 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmpc80o0dqc/build/CMakeInit.txt +loading initial cache file /tmp/tmp37zw4o46/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4541,24 +4577,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (1.7s) +-- Configuring done (3.2s) -- Generating done (0.0s) --- Build files have been written to: /tmp/tmpc80o0dqc/build +-- Build files have been written to: /tmp/tmp37zw4o46/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmpc80o0dqc/build' +Change Dir: '/tmp/tmp37zw4o46/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmpc80o0dqc/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpc80o0dqc/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmpc80o0dqc/build/CMakeFiles /tmp/tmpc80o0dqc/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp37zw4o46/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp37zw4o46/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmp37zw4o46/build/CMakeFiles /tmp/tmp37zw4o46/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmpc80o0dqc/build' +gmake[3]: Entering directory '/tmp/tmp37zw4o46/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmpc80o0dqc/build' -cd /tmp/tmpc80o0dqc/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpc80o0dqc/build /tmp/tmpc80o0dqc/build /tmp/tmpc80o0dqc/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Entering directory '/tmp/tmp37zw4o46/build' +cd /tmp/tmp37zw4o46/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp37zw4o46/build /tmp/tmp37zw4o46/build /tmp/tmp37zw4o46/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp37zw4o46/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Entering directory '/tmp/tmp37zw4o46/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4586,14 +4622,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ft.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Leaving directory '/tmp/tmp37zw4o46/build' [ 48%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmpc80o0dqc/build' -cd /tmp/tmpc80o0dqc/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpc80o0dqc/build /tmp/tmpc80o0dqc/build /tmp/tmpc80o0dqc/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Entering directory '/tmp/tmp37zw4o46/build' +cd /tmp/tmp37zw4o46/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp37zw4o46/build /tmp/tmp37zw4o46/build /tmp/tmp37zw4o46/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp37zw4o46/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Entering directory '/tmp/tmp37zw4o46/build' [ 52%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 56%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4621,16 +4657,16 @@ [100%] Linking CXX shared module cpp.cpython-313-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,--dependency-file=CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-313-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.15.2 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so -gmake[4]: Leaving directory '/tmp/tmpc80o0dqc/build' +gmake[4]: Leaving directory '/tmp/tmp37zw4o46/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmpc80o0dqc/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmpc80o0dqc/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmpc80o0dqc/build' +gmake[3]: Leaving directory '/tmp/tmp37zw4o46/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp37zw4o46/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp37zw4o46/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmpc80o0dqc/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmpc80o0dqc/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" +-- Installing: /tmp/tmp37zw4o46/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp37zw4o46/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl @@ -4766,8 +4802,8 @@ ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). - By 2026-Feb-18, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** @@ -4786,27 +4822,27 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -10.98s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -8.91s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -8.78s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -3.08s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -3.06s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -2.73s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -2.71s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -2.69s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] -2.68s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[2-DG-CellType.tetrahedron] -2.68s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -2.61s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -2.56s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] -2.55s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] -2.54s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] -2.47s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -2.46s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] -2.33s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -2.30s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] -2.25s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -2.21s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -= 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 81 warnings in 806.48s (0:13:26) = +16.15s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +9.49s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +9.44s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +5.69s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +5.49s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +5.08s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +4.84s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.54s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +4.33s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] +4.17s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] +4.09s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +4.01s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +3.87s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_block_nl +3.83s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.79s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] +3.74s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] +3.72s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +3.61s call test/unit/fem/test_fem_pipeline.py::test_vector_P_tp[3-Q-CellType.hexahedron] +3.59s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +3.58s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float64] += 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 81 warnings in 1280.53s (0:21:20) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc @@ -4888,7 +4924,7 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (1.6s) +-- Configuring done (4.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -4953,11 +4989,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.41 sec +1/1 Test #1: unittests ........................ Passed 0.74 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.41 sec +Total Test time (real) = 0.74 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 @@ -5013,8 +5049,8 @@ -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success --- Configuring done (3.4s) --- Generating done (0.0s) +-- Configuring done (5.6s) +-- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -5153,57 +5189,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 - 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.38 sec + 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.40 sec Start 2: demo_biharmonic_mpi_3 - 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.44 sec + 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.39 sec Start 3: demo_biharmonic_serial - 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.30 sec + 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.35 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.26 sec + 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.32 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.25 sec + 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.32 sec Start 6: demo_codim_0_assembly_serial - 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.19 sec + 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.22 sec Start 7: demo_custom_kernel_mpi_2 - 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.70 sec + 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.81 sec Start 8: demo_custom_kernel_mpi_3 - 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.64 sec + 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.78 sec Start 9: demo_custom_kernel_serial - 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.54 sec + 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.82 sec Start 10: demo_poisson_mpi_2 -10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.27 sec +10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.34 sec Start 11: demo_poisson_mpi_3 -11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.33 sec +11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.37 sec Start 12: demo_poisson_serial -12/24 Test #12: demo_poisson_serial .......................... Passed 0.20 sec +12/24 Test #12: demo_poisson_serial .......................... Passed 0.32 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.27 sec +13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.34 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.31 sec +14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.34 sec Start 15: demo_poisson_matrix_free_serial -15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.20 sec +15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.22 sec Start 16: demo_hyperelasticity_mpi_2 -16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.02 sec +16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.25 sec Start 17: demo_hyperelasticity_mpi_3 -17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 2.42 sec +17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.69 sec Start 18: demo_hyperelasticity_serial -18/24 Test #18: demo_hyperelasticity_serial .................. Passed 0.81 sec +18/24 Test #18: demo_hyperelasticity_serial .................. Passed 0.91 sec Start 19: demo_interpolation-io_mpi_2 -19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.27 sec +19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.33 sec Start 20: demo_interpolation-io_mpi_3 -20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.45 sec +20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.35 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.25 sec Start 22: demo_interpolation_different_meshes_mpi_2 -22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 4.36 sec +22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.76 sec Start 23: demo_interpolation_different_meshes_mpi_3 -23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 9.53 sec +23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.49 sec Start 24: demo_interpolation_different_meshes_serial -24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.58 sec +24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.72 sec 100% tests passed, 0 tests failed out of 24 -Total Test time (real) = 24.97 sec +Total Test time (real) = 23.08 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build @@ -5258,7 +5294,7 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (1.7s) +-- Configuring done (3.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -5323,11 +5359,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.40 sec +1/1 Test #1: unittests ........................ Passed 0.56 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.40 sec +Total Test time (real) = 0.56 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 @@ -5384,7 +5420,7 @@ -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode --- Configuring done (1.7s) +-- Configuring done (2.9s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' @@ -5507,57 +5543,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 - 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.36 sec + 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.47 sec Start 2: demo_biharmonic_mpi_3 - 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.44 sec + 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.45 sec Start 3: demo_biharmonic_serial - 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.33 sec + 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.41 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.27 sec + 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.32 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.26 sec + 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.31 sec Start 6: demo_codim_0_assembly_serial - 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.19 sec + 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.22 sec Start 7: demo_custom_kernel_mpi_2 - 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.64 sec + 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.88 sec Start 8: demo_custom_kernel_mpi_3 - 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.59 sec + 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.87 sec Start 9: demo_custom_kernel_serial - 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.54 sec + 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.79 sec Start 10: demo_poisson_mpi_2 -10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.27 sec +10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.48 sec Start 11: demo_poisson_mpi_3 -11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.27 sec +11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.39 sec Start 12: demo_poisson_serial -12/21 Test #12: demo_poisson_serial .......................... Passed 0.20 sec +12/21 Test #12: demo_poisson_serial .......................... Passed 0.25 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.27 sec +13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.31 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.26 sec +14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.33 sec Start 15: demo_poisson_matrix_free_serial -15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.19 sec +15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.22 sec Start 16: demo_interpolation-io_mpi_2 -16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.27 sec +16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.36 sec Start 17: demo_interpolation-io_mpi_3 -17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.27 sec +17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.34 sec Start 18: demo_interpolation-io_serial -18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.21 sec +18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.24 sec Start 19: demo_interpolation_different_meshes_mpi_2 -19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 4.01 sec +19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.71 sec Start 20: demo_interpolation_different_meshes_mpi_3 -20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 9.51 sec +20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.51 sec Start 21: demo_interpolation_different_meshes_serial -21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.53 sec +21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.76 sec 100% tests passed, 0 tests failed out of 21 -Total Test time (real) = 19.88 sec +Total Test time (real) = 19.63 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j16 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -5696,23 +5732,23 @@ Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Reading and parsing tag files Parsing files @@ -6072,12 +6108,6 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... @@ -6097,6 +6127,8 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... @@ -6120,8 +6152,6 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... @@ -6142,11 +6172,17 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating file documentation... -Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... -Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... +Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... +Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... @@ -6384,6 +6420,7 @@ Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py +Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp @@ -6392,7 +6429,6 @@ Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp -Generating XML output for file hyperelasticity.py Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md @@ -6420,12 +6456,6 @@ Generating XML output for file timing.cpp Generating XML output for file timing.h Generating XML output for file types.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h Generating XML output for file dolfinx.h Generating XML output for file assemble_matrix_impl.h Generating XML output for file assemble_scalar_impl.h @@ -6451,12 +6481,13 @@ Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h +Generating XML output for file petsc.cpp +Generating XML output for file petsc.cpp +Generating XML output for file petsc.h +Generating XML output for file petsc.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h @@ -6490,10 +6521,6 @@ Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h -Generating XML output for file petsc.cpp -Generating XML output for file petsc.cpp -Generating XML output for file petsc.h -Generating XML output for file petsc.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp @@ -6523,6 +6550,15 @@ Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ @@ -6547,7 +6583,7 @@ Generating XML output for the main page Running plantuml with JAVA... Running dot... -Generating dot graphs using 13 parallel threads... +Generating dot graphs using 17 parallel threads... Running dot for graph 1/67 Running dot for graph 2/67 Running dot for graph 3/67 @@ -6654,25 +6690,25 @@ MPLBACKEND=agg \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v8.1.3 -mkdir -p failed for path /nonexistent/first-build/.config/matplotlib: [Errno 13] Permission denied: '/nonexistent' -Matplotlib created a temporary cache directory at /tmp/matplotlib-hyb068vg because there was an issue with the default path (/nonexistent/first-build/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +mkdir -p failed for path /nonexistent/second-build/.config/matplotlib: [Errno 13] Permission denied: '/nonexistent' +Matplotlib created a temporary cache directory at /tmp/matplotlib-71co_936 because there was an issue with the default path (/nonexistent/second-build/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 TNT degree 2 error: 0.0029421918345155706 -TNT degree 2 error: 0.00017118942553986645 -TNT degree 3 error: 8.385106828737683e-06 -TNT degree 4 error: 3.394990183621853e-07 +TNT degree 2 error: 0.00017118942553985555 +TNT degree 3 error: 8.385106828740205e-06 +TNT degree 4 error: 3.3949902023386223e-07 TNT degree 5 error: 1.2528243192173552e-08 -TNT degree 6 error: 4.2428307448213893e-10 -TNT degree 7 error: 1.9860727784476619e-10 +TNT degree 6 error: 4.242819460990558e-10 +TNT degree 7 error: 1.9887032618709815e-10 TNT degree 8 error: 2.9565584931620583e-10 Q degree 1 error: 0.04076382001057708 -Q degree 2 error: 0.0029182213395268996 -Q degree 3 error: 0.00015944660110819882 -Q degree 4 error: 7.937421445105047e-06 -Q degree 5 error: 3.103466862452907e-07 -Q degree 6 error: 1.1356498982219625e-08 -Q degree 7 error: 3.416137665964911e-10 +Q degree 2 error: 0.002918221339526902 +Q degree 3 error: 0.00015944660110819866 +Q degree 4 error: 7.937421445107733e-06 +Q degree 5 error: 3.1034668624699986e-07 +Q degree 6 error: 1.1356498986978607e-08 +Q degree 7 error: 3.416145918786947e-10 Q degree 8 error: 6.191008477221316e-11 loading translations [en]... done making output directory... done @@ -6783,8 +6819,8 @@ copying downloadable files... [100%] demos/demo_types.py copying static files... -Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/documentation_options.js +Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/basic.css Writing evaluated template result to /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/.pybuild/html/_static/js/versions.js copying static files: done @@ -6966,15 +7002,15 @@ make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake +dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-7_amd64.deb'. dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-7_amd64.deb'. dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-7_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-7_amd64.deb'. -dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-7_amd64.deb'. +dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-7_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-7_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-7_amd64.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-7_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-7_amd64.deb'. -dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-7_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-7_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-7_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-7_amd64.buildinfo @@ -6984,12 +7020,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2885300/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3647552 and its subdirectories -I: Current time: Sun Jul 20 13:20:57 -12 2025 -I: pbuilder-time-stamp: 1753060857 +I: removing directory /srv/workspace/pbuilder/2885300 and its subdirectories +I: Current time: Sun Aug 23 22:56:15 +14 2026 +I: pbuilder-time-stamp: 1787475375