Diff of the two buildlogs: -- --- b1/build.log 2025-03-10 17:08:07.211967341 +0000 +++ b2/build.log 2025-03-10 17:09:10.177142275 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Mar 10 05:05:28 -12 2025 -I: pbuilder-time-stamp: 1741626328 +I: Current time: Mon Apr 13 13:31:06 +14 2026 +I: pbuilder-time-stamp: 1776036666 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -22,52 +22,84 @@ dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.4-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/5577/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 12 23:31 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='40159575606d44a2a026b6a56984e1a0' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='5577' - PS1='# ' - PS2='> ' + INVOCATION_ID=9c89d7fb2b124d4a9ec9d57721bfa98c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2351149 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rAmFMh64/pbuilderrc_beIE --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rAmFMh64/b1 --logfile b1/build.log golang-github-biogo-biogo_1.0.4-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rAmFMh64/pbuilderrc_baPb --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rAmFMh64/b2 --logfile b2/build.log golang-github-biogo-biogo_1.0.4-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/5577/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -169,7 +201,7 @@ Get: 52 http://deb.debian.org/debian trixie/main amd64 golang-github-biogo-store-dev all 0.0~git20200525.8c94ae1-2 [34.3 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 golang-github-biogo-hts-dev all 1.4.5+dfsg1-2 [319 kB] -Fetched 80.2 MB in 2s (38.5 MB/s) +Fetched 80.2 MB in 2s (38.0 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19800 files and directories currently installed.) @@ -400,7 +432,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.4-1_source.changes +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.4-1_source.changes dpkg-buildpackage: info: source package golang-github-biogo-biogo dpkg-buildpackage: info: source version 1.0.4-1 dpkg-buildpackage: info: source distribution unstable @@ -418,123 +454,123 @@ dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang - cd _build && go install -trimpath -v -p 20 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util + cd _build && go install -trimpath -v -p 42 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util +internal/godebugs +internal/byteorder internal/profilerecord internal/goos -unicode/utf8 -math/bits internal/asan internal/itoa -internal/runtime/atomic -unicode -internal/cpu -cmp +log/internal +internal/coverage/rtcov +unicode/utf8 internal/unsafeheader +github.com/biogo/store/llrb encoding -internal/msan -sync/atomic -github.com/biogo/biogo -internal/byteorder +math/bits internal/runtime/syscall -internal/godebugs -github.com/biogo/store/llrb +image/color +internal/msan internal/goarch -internal/coverage/rtcov -log/internal internal/goexperiment +internal/cpu +unicode +sync/atomic +github.com/biogo/biogo +cmp +internal/runtime/atomic internal/runtime/math -image/color internal/runtime/sys internal/abi internal/chacha8rand +internal/runtime/exithook internal/bytealg math -internal/runtime/exithook internal/stringslite internal/race -internal/runtime/maps internal/sync +internal/runtime/maps runtime iter internal/reflectlite sync maps slices -internal/bisect -internal/testlog -internal/godebug errors sort +internal/bisect +internal/testlog internal/oserror -io -strconv path +io github.com/biogo/store/interval +strconv +container/heap syscall -math/rand -strings +internal/godebug hash -container/heap internal/saferio +strings bytes -hash/adler32 reflect +hash/adler32 +math/rand github.com/biogo/biogo/feat bufio -github.com/biogo/biogo/feat/gene github.com/biogo/biogo/io/featio +github.com/biogo/biogo/feat/gene internal/syscall/execenv -internal/syscall/unix time -internal/poll +internal/syscall/unix io/fs -internal/filepathlite +internal/poll internal/fmtsort encoding/binary +internal/filepathlite os io/ioutil fmt +text/tabwriter github.com/biogo/biogo/alphabet -log encoding/csv -github.com/biogo/graph github.com/biogo/biogo/util -text/tabwriter -encoding/gob github.com/biogo/biogo/errors +github.com/biogo/graph +log compress/flate -github.com/biogo/hts/fai +encoding/gob github.com/biogo/biogo/concurrent -github.com/biogo/biogo/io/seqio/fai +github.com/biogo/hts/fai github.com/biogo/biogo/seq +github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/align/matrix -compress/zlib -github.com/biogo/biogo/seq/linear -github.com/biogo/biogo/io/seqio github.com/biogo/biogo/feat/genome -github.com/biogo/biogo/align github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/seq/sequtils +github.com/biogo/biogo/seq/linear +github.com/biogo/biogo/io/seqio github.com/biogo/biogo/seq/quality -github.com/biogo/biogo/complexity -github.com/biogo/biogo/io/seqio/fasta -github.com/biogo/biogo/io/seqio/fastq +github.com/biogo/biogo/align github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/drosophila/dm3 -github.com/biogo/biogo/index/kmerindex -github.com/biogo/biogo/seq/alignment +compress/zlib +github.com/biogo/biogo/io/seqio/fasta +github.com/biogo/biogo/io/seqio/fastq +github.com/biogo/biogo/pwm github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/seq/multi -github.com/biogo/biogo/pwm -github.com/biogo/biogo/morass +github.com/biogo/biogo/index/kmerindex +github.com/biogo/biogo/seq/alignment +github.com/biogo/biogo/complexity github.com/biogo/biogo/io/seqio/alignio +github.com/biogo/biogo/morass github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals dh_auto_test -O--builddirectory=_build -O--buildsystem=golang - cd _build && go test -vet=off -v -p 20 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util + cd _build && go test -vet=off -v -p 42 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util ? github.com/biogo/biogo [no test files] === RUN Test OK: 2 passed @@ -554,63 +590,63 @@ === RUN ExampleSWAffine_Align --- PASS: ExampleSWAffine_Align (0.00s) PASS -ok github.com/biogo/biogo/align 0.020s +ok github.com/biogo/biogo/align 0.006s ? github.com/biogo/biogo/align/matrix [no test files] === RUN Test OK: 5 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/align/pals 0.014s +ok github.com/biogo/biogo/align/pals 0.010s === RUN Test OK: 1 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/align/pals/dp 0.029s +ok github.com/biogo/biogo/align/pals/dp 0.008s === RUN Test OK: 1 passed ---- PASS: Test (0.03s) +--- PASS: Test (0.01s) PASS -ok github.com/biogo/biogo/align/pals/filter 0.049s +ok github.com/biogo/biogo/align/pals/filter 0.018s === RUN Test OK: 10 passed ---- PASS: Test (0.03s) +--- PASS: Test (0.00s) === RUN Example_allValid --- PASS: Example_allValid (0.00s) === RUN Example_complement --- PASS: Example_complement (0.00s) PASS -ok github.com/biogo/biogo/alphabet 0.044s +ok github.com/biogo/biogo/alphabet 0.007s === RUN Test OK: 4 passed ---- PASS: Test (0.65s) +--- PASS: Test (0.23s) PASS -ok github.com/biogo/biogo/complexity 0.673s +ok github.com/biogo/biogo/complexity 0.240s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleMap --- PASS: ExampleMap (0.00s) === RUN ExamplePromiseMap ---- PASS: ExamplePromiseMap (1.03s) +--- PASS: ExamplePromiseMap (1.01s) === RUN ExampleLazily --- PASS: ExampleLazily (0.00s) PASS -ok github.com/biogo/biogo/concurrent 1.044s +ok github.com/biogo/biogo/concurrent 1.012s === RUN Test OK: 3 passed, 1 skipped ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/errors 0.020s +ok github.com/biogo/biogo/errors 0.005s === RUN Test OK: 6 passed ---- PASS: Test (0.07s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/feat 0.136s +ok github.com/biogo/biogo/feat 0.006s === RUN Test OK: 4 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/feat/gene 0.022s +ok github.com/biogo/biogo/feat/gene 0.006s ? github.com/biogo/biogo/feat/genome [no test files] ? github.com/biogo/biogo/feat/genome/cow/bt7 [no test files] ? github.com/biogo/biogo/feat/genome/drosophila/dm3 [no test files] @@ -618,59 +654,59 @@ ? github.com/biogo/biogo/feat/genome/mouse/mm10 [no test files] === RUN Test OK: 5 passed ---- PASS: Test (5.79s) +--- PASS: Test (2.25s) PASS -ok github.com/biogo/biogo/index/kmerindex 5.868s +ok github.com/biogo/biogo/index/kmerindex 2.283s === RUN Test OK: 2 passed ---- PASS: Test (0.03s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/featio 0.119s +ok github.com/biogo/biogo/io/featio 0.007s === RUN Test OK: 4 passed ---- PASS: Test (0.02s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/featio/bed 0.033s +ok github.com/biogo/biogo/io/featio/bed 0.010s === RUN Test OK: 5 passed ---- PASS: Test (0.02s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/featio/gff 0.036s +ok github.com/biogo/biogo/io/featio/gff 0.008s === RUN TestSeqio --- PASS: TestSeqio (0.00s) === RUN Test OK: 3 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/seqio 0.024s +ok github.com/biogo/biogo/io/seqio 0.007s === RUN Test OK: 2 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/seqio/alignio 0.030s +ok github.com/biogo/biogo/io/seqio/alignio 0.007s ? github.com/biogo/biogo/io/seqio/fai [no test files] === RUN Test OK: 2 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) === RUN ExampleReader --- PASS: ExampleReader (0.00s) PASS -ok github.com/biogo/biogo/io/seqio/fasta 0.034s +ok github.com/biogo/biogo/io/seqio/fasta 0.010s === RUN Test OK: 2 passed --- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/io/seqio/fastq 0.027s +ok github.com/biogo/biogo/io/seqio/fastq 0.007s === RUN Test OK: 7 passed ---- PASS: Test (42.91s) +--- PASS: Test (3.14s) PASS -ok github.com/biogo/biogo/morass 42.920s +ok github.com/biogo/biogo/morass 3.145s ? github.com/biogo/biogo/pwm [no test files] === RUN TestSeq --- PASS: TestSeq (0.00s) PASS -ok github.com/biogo/biogo/seq 0.006s +ok github.com/biogo/biogo/seq 0.005s === RUN Test OK: 1 passed --- PASS: Test (0.00s) @@ -711,7 +747,7 @@ === RUN ExampleQSeq_truncate --- PASS: ExampleQSeq_truncate (0.00s) PASS -ok github.com/biogo/biogo/seq/alignment 0.015s +ok github.com/biogo/biogo/seq/alignment 0.010s === RUN Test OK: 1 passed --- PASS: Test (0.00s) @@ -738,7 +774,7 @@ === RUN ExampleSeq_compose --- PASS: ExampleSeq_compose (0.00s) PASS -ok github.com/biogo/biogo/seq/linear 0.012s +ok github.com/biogo/biogo/seq/linear 0.009s === RUN Test OK: 1 passed --- PASS: Test (0.00s) @@ -771,12 +807,12 @@ === RUN ExampleSet_Len --- PASS: ExampleSet_Len (0.00s) PASS -ok github.com/biogo/biogo/seq/multi 0.017s +ok github.com/biogo/biogo/seq/multi 0.013s === RUN Test OK: 1 passed --- PASS: Test (0.00s) PASS -ok github.com/biogo/biogo/seq/quality 0.020s +ok github.com/biogo/biogo/seq/quality 0.007s === RUN Test OK: 4 passed --- PASS: Test (0.00s) @@ -789,12 +825,12 @@ === RUN ExampleStitch --- PASS: ExampleStitch (0.00s) PASS -ok github.com/biogo/biogo/seq/sequtils 0.015s +ok github.com/biogo/biogo/seq/sequtils 0.010s === RUN Test OK: 11 passed --- PASS: Test (0.01s) PASS -ok github.com/biogo/biogo/util 0.019s +ok github.com/biogo/biogo/util 0.011s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang @@ -821,12 +857,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2351149/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/5577 and its subdirectories -I: Current time: Mon Mar 10 05:08:06 -12 2025 -I: pbuilder-time-stamp: 1741626486 +I: removing directory /srv/workspace/pbuilder/2351149 and its subdirectories +I: Current time: Mon Apr 13 13:32:06 +14 2026 +I: pbuilder-time-stamp: 1776036726