Diff of the two buildlogs: -- --- b1/build.log 2025-02-26 17:06:54.676707725 +0000 +++ b2/build.log 2025-02-26 17:10:08.291970943 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Feb 26 04:57:12 -12 2025 -I: pbuilder-time-stamp: 1740589032 +I: Current time: Wed Apr 1 13:29:56 +14 2026 +I: pbuilder-time-stamp: 1774999796 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying modify_testing.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3696987/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 31 23:30 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='cd0cf4dfd73d48fbb68026302c82417a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3696987' - PS1='# ' - PS2='> ' + INVOCATION_ID=af1be7d81b9d43d281acd8b09ec91042 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1753849 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aBV9taj7/pbuilderrc_KmDD --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aBV9taj7/b1 --logfile b1/build.log icb-utils_2.0.1+git20161002.afee1d9-5.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aBV9taj7/pbuilderrc_MZCP --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aBV9taj7/b2 --logfile b2/build.log icb-utils_2.0.1+git20161002.afee1d9-5.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3696987/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -393,7 +425,7 @@ Get: 250 http://deb.debian.org/debian trixie/main amd64 maven-repo-helper all 1.11 [142 kB] Get: 251 http://deb.debian.org/debian trixie/main amd64 unzip amd64 6.0-28 [166 kB] Get: 252 http://deb.debian.org/debian trixie/main amd64 maven-debian-helper all 2.6.7 [108 kB] -Fetched 238 MB in 14s (16.7 MB/s) +Fetched 238 MB in 12s (19.3 MB/s) Preconfiguring packages ... Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19799 files and directories currently installed.) @@ -1218,8 +1250,8 @@ Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Feb 26 17:00:53 UTC 2025. -Universal Time is now: Wed Feb 26 17:00:53 UTC 2025. +Local time is now: Tue Mar 31 23:31:46 UTC 2026. +Universal Time is now: Tue Mar 31 23:31:46 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... @@ -1626,7 +1658,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../icb-utils_2.0.1+git20161002.afee1d9-5_source.changes +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../icb-utils_2.0.1+git20161002.afee1d9-5_source.changes dpkg-buildpackage: info: source package icb-utils dpkg-buildpackage: info: source version 2.0.1+git20161002.afee1d9-5 dpkg-buildpackage: info: source distribution unstable @@ -1640,7 +1676,7 @@ mh_unpatchpoms -plibicb-utils-java dh_autoreconf_clean -O--buildsystem=maven jh_clean -O--buildsystem=maven -Duplicate specification "unlink|u" for option "u" +Duplicate specification "u=s" for option "u" dh_clean -O--buildsystem=maven debian/rules binary dh binary --buildsystem=maven --with javahelper @@ -1747,8 +1783,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 01:06 min -[INFO] Finished at: 2025-02-26T05:04:45-12:00 +[INFO] Total time: 6.523 s +[INFO] Finished at: 2026-04-01T13:32:22+14:00 [INFO] ------------------------------------------------------------------------ jh_build -O--buildsystem=maven dh_auto_test -O--buildsystem=maven @@ -1789,370 +1825,23 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running edu.cornell.med.icb.identifier.TestIndexedIdentifier -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.479 s - in edu.cornell.med.icb.identifier.TestIndexedIdentifier -[INFO] Running edu.cornell.med.icb.io.TestConditionsParser -05:05:13.690 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false -05:05:13.703 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' -05:05:13.703 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean -05:05:13.705 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 -05:05:13.706 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' -05:05:13.706 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' -05:05:13.720 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: -05:05:13.721 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' -05:05:13.721 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character -05:05:13.728 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 -05:05:13.729 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' -05:05:13.729 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' -05:05:13.730 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 -05:05:13.730 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' -05:05:13.730 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' -05:05:13.731 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 -05:05:13.731 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' -05:05:13.731 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer -05:05:13.734 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 -05:05:13.735 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' -05:05:13.735 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' -05:05:13.736 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 -05:05:13.736 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' -05:05:13.736 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' -05:05:13.745 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Setting default value: 0.0 -05:05:13.745 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Converting 'BigDecimal' value '0.0' to type 'BigDecimal' -05:05:13.745 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - No conversion required, value is already a BigDecimal -05:05:13.746 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Setting default value: 0 -05:05:13.746 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Converting 'BigInteger' value '0' to type 'BigInteger' -05:05:13.746 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - No conversion required, value is already a BigInteger -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' -05:05:13.747 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: -05:05:13.756 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' -05:05:13.756 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character -05:05:13.756 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 -05:05:13.757 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' -05:05:13.758 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' -05:05:13.758 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 -05:05:13.758 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' -05:05:13.758 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' -05:05:13.759 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Setting default value: -05:05:13.759 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '' to type 'String' -05:05:13.777 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Z@18a70f16 -05:05:13.778 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'boolean[]' value '[Z@18a70f16' to type 'boolean[]' -05:05:13.778 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a boolean[] -05:05:13.778 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [B@c8e4bb0 -05:05:13.778 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'byte[]' value '[B@c8e4bb0' to type 'byte[]' -05:05:13.778 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a byte[] -05:05:13.779 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [C@6279cee3 -05:05:13.779 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'char[]' value '[C@6279cee3' to type 'char[]' -05:05:13.779 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a char[] -05:05:13.779 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [D@4206a205 -05:05:13.779 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'double[]' value '[D@4206a205' to type 'double[]' -05:05:13.787 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a double[] -05:05:13.788 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [F@57175e74 -05:05:13.788 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'float[]' value '[F@57175e74' to type 'float[]' -05:05:13.788 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a float[] -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [I@c540f5a -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'int[]' value '[I@c540f5a' to type 'int[]' -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a int[] -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [J@770c2e6b -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'long[]' value '[J@770c2e6b' to type 'long[]' -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a long[] -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [S@4d826d77 -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'short[]' value '[S@4d826d77' to type 'short[]' -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a short[] -05:05:13.789 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigDecimal;@77e9807f -05:05:13.807 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@77e9807f' to type 'BigDecimal[]' -05:05:13.808 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigDecimal[] -05:05:13.808 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigInteger;@1a38c59b -05:05:13.808 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@1a38c59b' to type 'BigInteger[]' -05:05:13.808 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigInteger[] -05:05:13.815 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Boolean;@44a664f2 -05:05:13.816 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Boolean[]' value '[Ljava.lang.Boolean;@44a664f2' to type 'Boolean[]' -05:05:13.816 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Boolean[] -05:05:13.816 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Byte;@2357d90a -05:05:13.816 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Byte[]' value '[Ljava.lang.Byte;@2357d90a' to type 'Byte[]' -05:05:13.816 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Byte[] -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Character;@145eaa29 -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Character[]' value '[Ljava.lang.Character;@145eaa29' to type 'Character[]' -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Character[] -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Double;@8b96fde -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Double[]' value '[Ljava.lang.Double;@8b96fde' to type 'Double[]' -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Double[] -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Float;@4c40b76e -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Float[]' value '[Ljava.lang.Float;@4c40b76e' to type 'Float[]' -05:05:13.817 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Float[] -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Integer;@41ee392b -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Integer[]' value '[Ljava.lang.Integer;@41ee392b' to type 'Integer[]' -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Integer[] -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Long;@57d5872c -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Long[]' value '[Ljava.lang.Long;@57d5872c' to type 'Long[]' -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Long[] -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Short;@36f0f1be -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Short[]' value '[Ljava.lang.Short;@36f0f1be' to type 'Short[]' -05:05:13.818 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Short[] -05:05:13.819 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.String;@6ee12bac -05:05:13.819 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'String[]' value '[Ljava.lang.String;@6ee12bac' to type 'String[]' -05:05:13.819 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a String[] -05:05:13.819 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Class;@64c87930 -05:05:13.819 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Class[]' value '[Ljava.lang.Class;@64c87930' to type 'Class[]' -05:05:13.842 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Class[] -05:05:13.842 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Date;@275710fc -05:05:13.842 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Date[]' value '[Ljava.util.Date;@275710fc' to type 'Date[]' -05:05:13.842 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Date[] -05:05:13.842 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Calendar;@75f9eccc -05:05:13.843 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Calendar[]' value '[Ljava.util.Calendar;@75f9eccc' to type 'Calendar[]' -05:05:13.843 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Calendar[] -05:05:13.843 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.io.File;@4de5031f -05:05:13.843 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.io.File[]' value '[Ljava.io.File;@4de5031f' to type 'java.io.File[]' -05:05:13.860 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.io.File[] -05:05:13.860 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Date;@5d47c63f -05:05:13.868 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@5d47c63f' to type 'java.sql.Date[]' -05:05:13.868 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Date[] -05:05:13.868 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Time;@3bbc39f8 -05:05:13.868 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@3bbc39f8' to type 'java.sql.Time[]' -05:05:13.868 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Time[] -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Timestamp;@29f69090 -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@29f69090' to type 'java.sql.Timestamp[]' -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Timestamp[] -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.net.URL;@ca263c2 -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.net.URL[]' value '[Ljava.net.URL;@ca263c2' to type 'java.net.URL[]' -05:05:13.869 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.net.URL[] -05:05:14.078 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' -05:05:14.078 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' -05:05:14.078 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.078 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' -05:05:14.198 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' -05:05:14.198 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' -05:05:14.209 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' -05:05:14.210 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' -05:05:14.210 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.210 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' -05:05:14.245 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' -05:05:14.245 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' -05:05:14.245 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.245 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' -05:05:14.245 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '8.367' to class 'double' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '8.367' to type 'Double' -05:05:14.246 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.247 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '8.367' -05:05:14.247 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3bf' to class 'java.lang.String' -05:05:14.247 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '3bf' to type 'String' -05:05:14.268 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '567' to class 'int' -05:05:14.268 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '567' to type 'Integer' -05:05:14.268 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.268 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '567' -05:05:14.289 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean -05:05:14.347 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -05:05:14.347 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.347 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.347 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.360 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -05:05:14.360 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -05:05:14.360 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.360 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -05:05:14.360 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean -05:05:14.361 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.362 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -05:05:14.363 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -05:05:14.363 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -05:05:14.363 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.363 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -05:05:14.377 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'int[]' -05:05:14.377 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.377 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.386 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '30' to type 'Integer' -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '30' -05:05:14.387 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'double[]' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 2.5' to type 'Double' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.5' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 1.5' to type 'Double' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '1.5' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'java.lang.String[]' -05:05:14.388 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' -05:05:14.389 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field3b' to type 'String' -05:05:14.396 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field 3c' to type 'String' -05:05:14.396 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'int[]' -05:05:14.396 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.396 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.396 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'double[]' -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'java.lang.String[]' -05:05:14.397 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' -05:05:14.414 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -05:05:14.414 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.414 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.414 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.415 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -05:05:14.415 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -05:05:14.415 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.415 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -05:05:14.441 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -05:05:14.441 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.441 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.441 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.442 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -05:05:14.452 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -05:05:14.453 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.453 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.453 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.453 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3.5' to class 'double' -05:05:14.453 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'field3' to class 'java.lang.String' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.454 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '2.2' to class 'double' -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'threedefault' to class 'java.lang.String' -05:05:14.455 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' -05:05:14.482 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -05:05:14.483 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.483 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.483 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.504 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -05:05:14.504 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -05:05:14.504 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.504 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '10' to class 'int' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '10' to type 'Integer' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '10' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.505 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '20' to class 'int' -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '20' to type 'Integer' -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.506 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '20' -05:05:14.517 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -05:05:14.517 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -05:05:14.517 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.517 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.518 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -05:05:14.519 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -05:05:14.536 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.696 s - in edu.cornell.med.icb.io.TestConditionsParser -[INFO] Running edu.cornell.med.icb.io.TestTSVReader -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in edu.cornell.med.icb.io.TestTSVReader -[INFO] Running edu.cornell.med.icb.io.TestResourceFinder -05:05:14.714 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.724 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.725 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader -05:05:14.725 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.726 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.726 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using system class loader -05:05:14.726 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] as file in filesystem -05:05:14.727 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - ... fo`und url is [file:/tmp/temp-file.txt] -05:05:14.748 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.749 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.749 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader -05:05:14.749 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.750 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.750 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using system class loader -05:05:14.750 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] as file in filesystem -05:05:14.759 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.765 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.766 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using system class loader -05:05:14.766 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.766 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 -05:05:14.766 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using system class loader -05:05:14.767 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] as file in filesystem -[WARNING] Tests run: 5, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.158 s - in edu.cornell.med.icb.io.TestResourceFinder -[INFO] Running edu.cornell.med.icb.util.TestICBStringNormalizer -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestICBStringNormalizer -[INFO] Running edu.cornell.med.icb.util.TestICBStringUtils -[INFO] Tests run: 25, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.041 s - in edu.cornell.med.icb.util.TestICBStringUtils -[INFO] Running edu.cornell.med.icb.util.TestICBFilenameUtils -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in edu.cornell.med.icb.util.TestICBFilenameUtils +[INFO] Running edu.cornell.med.icb.util.TestSimpleChecksum +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.06 s - in edu.cornell.med.icb.util.TestSimpleChecksum [INFO] Running edu.cornell.med.icb.util.TestVersionUtils -05:05:14.960 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN -05:05:14.961 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN -05:05:14.969 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: 2.6 -[WARNING] Tests run: 4, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.016 s - in edu.cornell.med.icb.util.TestVersionUtils -[INFO] Running edu.cornell.med.icb.util.TestRandomAdapter -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in edu.cornell.med.icb.util.TestRandomAdapter +13:32:25.405 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN +13:32:25.409 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN +13:32:25.411 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: 2.6 +[WARNING] Tests run: 4, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.075 s - in edu.cornell.med.icb.util.TestVersionUtils +[INFO] Running edu.cornell.med.icb.util.TestICBFilenameUtils +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestICBFilenameUtils [INFO] Running edu.cornell.med.icb.util.TestBoundedPriorityQueue -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.062 s - in edu.cornell.med.icb.util.TestBoundedPriorityQueue -[INFO] Running edu.cornell.med.icb.util.TestSimpleChecksum -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.034 s - in edu.cornell.med.icb.util.TestSimpleChecksum -[INFO] Running edu.cornell.med.icb.ip.TestIpAddress -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in edu.cornell.med.icb.ip.TestIpAddress -[INFO] Running edu.cornell.med.icb.ip.TestIpUtils -[WARNING] Tests run: 13, Failures: 0, Errors: 0, Skipped: 5, Time elapsed: 0.008 s - in edu.cornell.med.icb.ip.TestIpUtils -[INFO] Running edu.cornell.med.icb.iterators.TestTextFileLineIterator -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in edu.cornell.med.icb.iterators.TestTextFileLineIterator -[INFO] Running edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 s - in edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator -[INFO] Running edu.cornell.med.icb.iterators.TestTsvLineIterator -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.02 s - in edu.cornell.med.icb.iterators.TestTsvLineIterator +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in edu.cornell.med.icb.util.TestBoundedPriorityQueue +[INFO] Running edu.cornell.med.icb.util.TestICBStringNormalizer +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in edu.cornell.med.icb.util.TestICBStringNormalizer +[INFO] Running edu.cornell.med.icb.util.TestRandomAdapter +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in edu.cornell.med.icb.util.TestRandomAdapter +[INFO] Running edu.cornell.med.icb.util.TestICBStringUtils +[INFO] Tests run: 25, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.018 s - in edu.cornell.med.icb.util.TestICBStringUtils [INFO] Running edu.cornell.med.icb.cli.TestUseModality (-m|--mode) Mode of execution, one of: mode1 @@ -2160,7 +1849,354 @@ [-h|--help] This message. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.13 s - in edu.cornell.med.icb.cli.TestUseModality +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.017 s - in edu.cornell.med.icb.cli.TestUseModality +[INFO] Running edu.cornell.med.icb.ip.TestIpAddress +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in edu.cornell.med.icb.ip.TestIpAddress +[INFO] Running edu.cornell.med.icb.ip.TestIpUtils +[WARNING] Tests run: 13, Failures: 0, Errors: 0, Skipped: 5, Time elapsed: 0.002 s - in edu.cornell.med.icb.ip.TestIpUtils +[INFO] Running edu.cornell.med.icb.identifier.TestIndexedIdentifier +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in edu.cornell.med.icb.identifier.TestIndexedIdentifier +[INFO] Running edu.cornell.med.icb.iterators.TestTsvLineIterator +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in edu.cornell.med.icb.iterators.TestTsvLineIterator +[INFO] Running edu.cornell.med.icb.iterators.TestTextFileLineIterator +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.iterators.TestTextFileLineIterator +[INFO] Running edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.026 s - in edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator +[INFO] Running edu.cornell.med.icb.io.TestResourceFinder +13:32:25.560 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.560 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using system class loader +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] as file in filesystem +13:32:25.561 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - ... fo`und url is [file:/tmp/temp-file.txt] +13:32:25.562 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.562 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.562 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader +13:32:25.562 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.563 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.563 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using system class loader +13:32:25.563 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] as file in filesystem +13:32:25.564 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.564 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.565 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using system class loader +13:32:25.565 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.565 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@639fee48 +13:32:25.565 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using system class loader +13:32:25.565 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] as file in filesystem +[WARNING] Tests run: 5, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.009 s - in edu.cornell.med.icb.io.TestResourceFinder +[INFO] Running edu.cornell.med.icb.io.TestTSVReader +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in edu.cornell.med.icb.io.TestTSVReader +[INFO] Running edu.cornell.med.icb.io.TestConditionsParser +13:32:25.580 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false +13:32:25.580 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' +13:32:25.580 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' +13:32:25.582 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character +13:32:25.583 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 +13:32:25.583 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' +13:32:25.583 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' +13:32:25.583 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 +13:32:25.584 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' +13:32:25.584 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' +13:32:25.584 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 +13:32:25.584 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' +13:32:25.584 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' +13:32:25.585 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' +13:32:25.587 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Setting default value: 0.0 +13:32:25.587 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Converting 'BigDecimal' value '0.0' to type 'BigDecimal' +13:32:25.587 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - No conversion required, value is already a BigDecimal +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Setting default value: 0 +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Converting 'BigInteger' value '0' to type 'BigInteger' +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - No conversion required, value is already a BigInteger +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' +13:32:25.588 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 +13:32:25.589 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 +13:32:25.590 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' +13:32:25.591 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' +13:32:25.591 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Setting default value: +13:32:25.591 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '' to type 'String' +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Z@36c88a32 +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'boolean[]' value '[Z@36c88a32' to type 'boolean[]' +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a boolean[] +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [B@5be6e01c +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'byte[]' value '[B@5be6e01c' to type 'byte[]' +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a byte[] +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [C@1c93084c +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'char[]' value '[C@1c93084c' to type 'char[]' +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a char[] +13:32:25.596 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [D@6ef888f6 +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'double[]' value '[D@6ef888f6' to type 'double[]' +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a double[] +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [F@7ce3cb8e +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'float[]' value '[F@7ce3cb8e' to type 'float[]' +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a float[] +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [I@5223e5ee +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'int[]' value '[I@5223e5ee' to type 'int[]' +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a int[] +13:32:25.597 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [J@bef2d72 +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'long[]' value '[J@bef2d72' to type 'long[]' +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a long[] +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [S@22a637e7 +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'short[]' value '[S@22a637e7' to type 'short[]' +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a short[] +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigDecimal;@1d119efb +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@1d119efb' to type 'BigDecimal[]' +13:32:25.598 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigDecimal[] +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigInteger;@76908cc0 +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@76908cc0' to type 'BigInteger[]' +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigInteger[] +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Boolean;@35047d03 +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Boolean[]' value '[Ljava.lang.Boolean;@35047d03' to type 'Boolean[]' +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Boolean[] +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Byte;@769f71a9 +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Byte[]' value '[Ljava.lang.Byte;@769f71a9' to type 'Byte[]' +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Byte[] +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Character;@5ae50ce6 +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Character[]' value '[Ljava.lang.Character;@5ae50ce6' to type 'Character[]' +13:32:25.599 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Character[] +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Double;@be64738 +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Double[]' value '[Ljava.lang.Double;@be64738' to type 'Double[]' +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Double[] +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Float;@49d904ec +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Float[]' value '[Ljava.lang.Float;@49d904ec' to type 'Float[]' +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Float[] +13:32:25.600 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Integer;@3d680b5a +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Integer[]' value '[Ljava.lang.Integer;@3d680b5a' to type 'Integer[]' +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Integer[] +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Long;@4a22f9e2 +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Long[]' value '[Ljava.lang.Long;@4a22f9e2' to type 'Long[]' +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Long[] +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Short;@418e7838 +13:32:25.601 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Short[]' value '[Ljava.lang.Short;@418e7838' to type 'Short[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Short[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.String;@3c130745 +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'String[]' value '[Ljava.lang.String;@3c130745' to type 'String[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a String[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Class;@3e2e18f2 +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Class[]' value '[Ljava.lang.Class;@3e2e18f2' to type 'Class[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Class[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Date;@63021689 +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Date[]' value '[Ljava.util.Date;@63021689' to type 'Date[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Date[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Calendar;@3e92efc3 +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Calendar[]' value '[Ljava.util.Calendar;@3e92efc3' to type 'Calendar[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Calendar[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.io.File;@72a7c7e0 +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.io.File[]' value '[Ljava.io.File;@72a7c7e0' to type 'java.io.File[]' +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.io.File[] +13:32:25.602 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Date;@70e8f8e +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@70e8f8e' to type 'java.sql.Date[]' +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Date[] +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Time;@5bd03f44 +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@5bd03f44' to type 'java.sql.Time[]' +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Time[] +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Timestamp;@5a63f509 +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@5a63f509' to type 'java.sql.Timestamp[]' +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Timestamp[] +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.net.URL;@34b7ac2f +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.net.URL[]' value '[Ljava.net.URL;@34b7ac2f' to type 'java.net.URL[]' +13:32:25.603 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.net.URL[] +13:32:25.617 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' +13:32:25.617 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' +13:32:25.618 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.618 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' +13:32:25.624 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' +13:32:25.625 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' +13:32:25.626 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' +13:32:25.626 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' +13:32:25.626 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.626 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' +13:32:25.630 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' +13:32:25.630 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' +13:32:25.630 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.630 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' +13:32:25.631 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '8.367' to class 'double' +13:32:25.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '8.367' to type 'Double' +13:32:25.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '8.367' +13:32:25.632 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3bf' to class 'java.lang.String' +13:32:25.632 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '3bf' to type 'String' +13:32:25.634 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '567' to class 'int' +13:32:25.634 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '567' to type 'Integer' +13:32:25.634 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.634 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '567' +13:32:25.634 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean +13:32:25.641 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +13:32:25.642 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +13:32:25.643 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +13:32:25.644 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +13:32:25.644 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.644 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +13:32:25.645 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'int[]' +13:32:25.645 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.645 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.645 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '30' to type 'Integer' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '30' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'double[]' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.646 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 2.5' to type 'Double' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.5' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 1.5' to type 'Double' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '1.5' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'java.lang.String[]' +13:32:25.647 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field3b' to type 'String' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field 3c' to type 'String' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'int[]' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'double[]' +13:32:25.648 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' +13:32:25.649 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.649 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' +13:32:25.649 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'java.lang.String[]' +13:32:25.649 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' +13:32:25.651 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +13:32:25.651 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.651 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.651 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.652 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +13:32:25.652 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +13:32:25.652 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.652 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +13:32:25.653 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.654 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3.5' to class 'double' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'field3' to class 'java.lang.String' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +13:32:25.655 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '2.2' to class 'double' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'threedefault' to class 'java.lang.String' +13:32:25.656 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.658 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '10' to class 'int' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '10' to type 'Integer' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '10' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.659 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +13:32:25.660 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '20' to class 'int' +13:32:25.660 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '20' to type 'Integer' +13:32:25.660 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.660 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '20' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.661 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +13:32:25.662 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +13:32:25.663 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +13:32:25.663 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +13:32:25.663 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +13:32:25.663 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.091 s - in edu.cornell.med.icb.io.TestConditionsParser [INFO] [INFO] Results: [INFO] @@ -2169,8 +2205,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 45.400 s -[INFO] Finished at: 2025-02-26T05:05:46-12:00 +[INFO] Total time: 31.785 s +[INFO] Finished at: 2026-04-01T13:32:55+14:00 [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=maven @@ -2203,15 +2239,15 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 5.688 s -[INFO] Finished at: 2025-02-26T05:06:07-12:00 +[INFO] Total time: 0.454 s +[INFO] Finished at: 2026-04-01T13:32:57+14:00 [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -plibicb-utils-java --base-directory=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9 --non-explore Analysing pom.xml... > dpkg --search /usr/share/maven-repo/colt/colt/*/* dpkg failed to execute successfully Offline mode. Give up looking for package containing /usr/share/maven-repo/colt/colt -Feb 26, 2025 5:06:26 AM org.debian.maven.packager.DependenciesSolver$ToResolve resolve +Apr 01, 2026 1:33:03 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve SEVERE: Cannot resolve dependencies in /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/pom.xml: Dependency not found colt:colt:jar:debian ERROR: pom.xml: dependency is not packaged in the Maven repository for Debian: colt:colt:debian @@ -2219,7 +2255,7 @@ Some problems were found in this project, exiting... mh_unpatchpoms -plibicb-utils-java jh_installjavadoc -O--buildsystem=maven -Duplicate specification "author|A=s" for option "A" +Duplicate specification "A" for option "A" dh_installdocs -O--buildsystem=maven dh_installchangelogs -O--buildsystem=maven dh_installsystemduser -O--buildsystem=maven @@ -2229,7 +2265,7 @@ jh_classpath -O--buildsystem=maven Duplicate specification "V:s" for option "V" jh_manifest -O--buildsystem=maven -Duplicate specification "V:s" for option "V" +Duplicate specification "version|V" for option "V" jh_exec -O--buildsystem=maven jh_depends -O--buildsystem=maven dh_strip_nondeterminism -O--buildsystem=maven @@ -2250,12 +2286,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1753849/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3696987 and its subdirectories -I: Current time: Wed Feb 26 05:06:53 -12 2025 -I: pbuilder-time-stamp: 1740589613 +I: removing directory /srv/workspace/pbuilder/1753849 and its subdirectories +I: Current time: Wed Apr 1 13:33:07 +14 2026 +I: pbuilder-time-stamp: 1774999987