Diff of the two buildlogs: -- --- b1/build.log 2025-02-25 10:31:20.649506151 +0000 +++ b2/build.log 2025-02-25 10:36:48.866803875 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Feb 24 22:26:23 -12 2025 -I: pbuilder-time-stamp: 1740479183 +I: Current time: Tue Mar 31 06:54:23 +14 2026 +I: pbuilder-time-stamp: 1774889663 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -24,51 +24,83 @@ dpkg-source: info: applying add-distclean-target.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3460018/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 30 16:54 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='87610a65635d4f898b8559ce09fb6eb8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3460018' - PS1='# ' - PS2='> ' + INVOCATION_ID=4d5e87e3c3c246c9a92e694301a1de6c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2274263 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PfrlKhdL/pbuilderrc_lnnV --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PfrlKhdL/b1 --logfile b1/build.log octave-nan_3.7.0-4.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PfrlKhdL/pbuilderrc_qbrp --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PfrlKhdL/b2 --logfile b2/build.log octave-nan_3.7.0-4.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3460018/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -654,7 +686,7 @@ Get: 538 http://deb.debian.org/debian trixie/main amd64 liblinear-dev amd64 2.3.0+dfsg-5+b2 [34.1 kB] Get: 539 http://deb.debian.org/debian trixie/main amd64 libsvm3 amd64 3.24+ds-6+b1 [41.5 kB] Get: 540 http://deb.debian.org/debian trixie/main amd64 libsvm-dev amd64 3.24+ds-6+b1 [62.1 kB] -Fetched 209 MB in 10s (21.9 MB/s) +Fetched 209 MB in 5s (41.3 MB/s) Preconfiguring packages ... Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19802 files and directories currently installed.) @@ -2867,7 +2899,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/octave-nan-3.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../octave-nan_3.7.0-4_source.changes +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/octave-nan-3.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../octave-nan_3.7.0-4_source.changes dpkg-buildpackage: info: source package octave-nan dpkg-buildpackage: info: source version 3.7.0-4 dpkg-buildpackage: info: source distribution unstable @@ -3016,17 +3052,17 @@ g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -c tron.cpp g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -c linear.cpp /usr/bin/mkoctfile --verbose -o "svm_model_octave.o" -c "svm_model_matlab.c" +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG histo_mex.cpp -o /tmp/oct-47qojL.o cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -c svm.cpp -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG histo_mex.cpp -o /tmp/oct-lZtIF8.o /usr/bin/mkoctfile --verbose --mex -lgomp "xptopen.cpp" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG sumskipnan_mex.cpp -o /tmp/oct-OPOefO.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG covm_mex.cpp -o /tmp/oct-XX85Ml.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG kth_element.cpp -o /tmp/oct-ujc5om.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG str2array.cpp -o /tmp/oct-MWqorm.o -gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread svm_model_matlab.c -o svm_model_octave.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG xptopen.cpp -o /tmp/oct-aODIKG.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG covm_mex.cpp -o /tmp/oct-J37aEz.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG sumskipnan_mex.cpp -o /tmp/oct-CIkYcF.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG kth_element.cpp -o /tmp/oct-kWl77J.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG str2array.cpp -o /tmp/oct-uLD5dv.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread svm_model_matlab.c -o svm_model_octave.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG xptopen.cpp -o /tmp/oct-ulhee3.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ svm_model_matlab.c: In function 'matlab_matrix_to_model': svm_model_matlab.c:263:54: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] @@ -3066,18 +3102,18 @@ xptopen.cpp:510:30: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 510 | fread(data, bi[NS], M, fid); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o kth_element.mex /tmp/oct-ujc5om.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o str2array.mex /tmp/oct-MWqorm.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o histo_mex.mex /tmp/oct-lZtIF8.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o covm_mex.mex /tmp/oct-XX85Ml.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o sumskipnan_mex.mex /tmp/oct-OPOefO.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o xptopen.mex /tmp/oct-aODIKG.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o kth_element.mex /tmp/oct-kWl77J.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o str2array.mex /tmp/oct-uLD5dv.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o histo_mex.mex /tmp/oct-47qojL.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o covm_mex.mex /tmp/oct-J37aEz.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o xptopen.mex /tmp/oct-ulhee3.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o sumskipnan_mex.mex /tmp/oct-CIkYcF.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex -lgomp svmtrain_mex.cpp svm_model_octave.o svm.o -o svmtrain_mex.mex /usr/bin/mkoctfile --verbose --mex -lgomp svmpredict_mex.cpp svm_model_octave.o svm.o -o svmpredict_mex.mex -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG svmtrain_mex.cpp -o /tmp/oct-khpbTu.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG svmpredict_mex.cpp -o /tmp/oct-N7kT04.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG svmtrain_mex.cpp -o /tmp/oct-cWyFTf.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I. -DMEX_DEBUG svmpredict_mex.cpp -o /tmp/oct-jPiQxB.o /usr/bin/mkoctfile --verbose --mex -lgomp -lblas train.c tron.o linear.o linear_model_matlab.c -gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -I. -DMEX_DEBUG train.c -o /tmp/oct-CPRtoJ.o +gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -I. -DMEX_DEBUG train.c -o /tmp/oct-2pU0B8.o train.c: In function 'print_null': train.c:56:29: warning: unused parameter 's' [-Wunused-parameter] 56 | void print_null(const char *s) {} @@ -3099,6 +3135,7 @@ train.c:258:100: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 258 | param.weight_label = (int *) realloc(param.weight_label,sizeof(int)*param.nr_weight); | ^ +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o svmpredict_mex.mex svm_model_octave.o svm.o /tmp/oct-jPiQxB.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro train.c:259:94: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 259 | param.weight = (double *) realloc(param.weight,sizeof(double)*param.nr_weight); | ^ @@ -3109,9 +3146,8 @@ train.c:381:32: warning: conversion to 'long unsigned int' from 'mwSize' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 381 | elements = num_samples + l*2; | ^ -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o svmpredict_mex.mex svm_model_octave.o svm.o /tmp/oct-N7kT04.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o svmtrain_mex.mex svm_model_octave.o svm.o /tmp/oct-khpbTu.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro -gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -I. -DMEX_DEBUG linear_model_matlab.c -o /tmp/oct-qUUWcg.o +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o svmtrain_mex.mex svm_model_octave.o svm.o /tmp/oct-cWyFTf.o -lgomp -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -fexceptions -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wextra -Wconversion -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -fexceptions -fPIC -fno-omit-frame-pointer -pthread -I. -DMEX_DEBUG linear_model_matlab.c -o /tmp/oct-aYI3eN.o linear_model_matlab.c: In function 'matlab_matrix_to_model': linear_model_matlab.c:151:54: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 151 | rhs = (mxArray **) mxMalloc(sizeof(mxArray *)*num_of_fields); @@ -3128,11 +3164,11 @@ linear_model_matlab.c:204:19: note: in expansion of macro 'Malloc' 204 | model_->w=Malloc(double, w_size*nr_w); | ^~~~~~ -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o train.mex tron.o linear.o /tmp/oct-CPRtoJ.o /tmp/oct-qUUWcg.o -lgomp -lblas -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/octave-nan-3.7.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -o train.mex tron.o linear.o /tmp/oct-2pU0B8.o /tmp/oct-aYI3eN.o -lgomp -lblas -shared -Wl,-Bsymbolic -Wl,-z,relro -pthread -flto=auto -ffat-lto-objects -Wl,-z,relro make[1]: Leaving directory '/build/reproducible-path/octave-nan-3.7.0/src' copyfile /build/reproducible-path/octave-nan-3.7.0/./src/make.m /build/reproducible-path/octave-nan-3.7.0/./inst copyfile /build/reproducible-path/octave-nan-3.7.0/./src/covm_mex.mex /build/reproducible-path/octave-nan-3.7.0/./src/histo_mex.mex /build/reproducible-path/octave-nan-3.7.0/./src/kth_element.mex /build/reproducible-path/octave-nan-3.7.0/./src/str2array.mex /build/reproducible-path/octave-nan-3.7.0/./src/sumskipnan_mex.mex /build/reproducible-path/octave-nan-3.7.0/./src/svmpredict_mex.mex /build/reproducible-path/octave-nan-3.7.0/./src/svmtrain_mex.mex /build/reproducible-path/octave-nan-3.7.0/./src/train.mex /build/reproducible-path/octave-nan-3.7.0/./src/xptopen.mex /build/reproducible-path/octave-nan-3.7.0/./inst/x86_64-pc-linux-gnu-api-v59 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/ranks.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/zscore.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3141,7 +3177,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/meansq.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/sumsq.m shadows a built-in function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3150,7 +3186,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mean.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mad.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3159,7 +3195,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/corrcoef.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/var.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3168,7 +3204,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/median.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/std.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3186,7 +3222,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/moment.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/prctile.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3195,7 +3231,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/sumsq.m shadows a built-in function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/ranks.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3204,7 +3240,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/quantile.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/range.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3213,7 +3249,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/kurtosis.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/center.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3222,7 +3258,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/zscore.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/moment.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3231,7 +3267,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/range.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/median.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3240,7 +3276,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/skewness.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/quantile.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3249,7 +3285,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/center.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/skewness.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3258,7 +3294,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/prctile.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/spearman.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3267,7 +3303,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/std.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/detrend.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3276,7 +3312,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/detrend.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/kurtosis.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3285,7 +3321,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/var.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/meansq.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3294,7 +3330,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mad.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/corrcoef.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3303,7 +3339,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/cov.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mean.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3312,7 +3348,7 @@ pkg at line 619 column 9 /usr/share/dh-octave/install-pkg.m at line 38 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/spearman.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/cov.m shadows a core library function warning: called from doc_cache_create>gen_doc_cache_in_dir at line 146 column 5 doc_cache_create at line 62 column 12 @@ -3351,211 +3387,101 @@ Checking package... Run the unit tests... Checking m files ... -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/ranks.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/zscore.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/meansq.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/sumsq.m shadows a built-in function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mean.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mad.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/corrcoef.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/var.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/median.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/std.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/iqr.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/moment.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/prctile.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/sumsq.m shadows a built-in function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/ranks.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/quantile.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/range.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/kurtosis.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/center.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/zscore.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/moment.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/range.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/median.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/skewness.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/quantile.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/center.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/skewness.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/prctile.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/spearman.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/std.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/detrend.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/detrend.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/kurtosis.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/var.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/meansq.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mad.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/corrcoef.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/cov.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/mean.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/spearman.m shadows a core library function +warning: function /build/reproducible-path/octave-nan-3.7.0/debian/octave-nan/usr/share/octave/packages/nan-3.7.0/cov.m shadows a core library function warning: called from - /tmp/tmp.pAfkt1Lq2Y at line 12 column 1 + /tmp/tmp.WwRyKV3k2C at line 12 column 1 -[inst/ranks.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ranks.m -***** shared z, r1, r2 - z = magic (4); - r1 = [4 1 1 4; 2 3 3 2; 3 2 2 3; 1 4 4 1]; - r2 = [4 1 2 3; 1 4 3 2; 3 2 1 4; 2 3 4 1]; -***** assert (ranks(z), r1); -***** assert (ranks(z, 2), r2); - z = nan(2, 2, 2); - z(:, :, 1) = [1 2; 3 4]; - z(:, :, 2) = [4 3; 2 1]; - r1 = cat(3, [1 1; 2 2], [2 2; 1 1]); - r2 = cat(3, [1 2; 1 2], [2 1; 2 1]); -***** assert (ranks(z), r1); -***** assert (ranks(z, 2), r2); -***** assert (ranks(z, 3), r1); -5 tests, 5 passed, 0 known failure, 0 skipped -[inst/harmmean.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/harmmean.m -***** assert(harmmean([1,1/4,1,NaN]) == 0.5) -***** assert(harmmean([1,2,0,NaN]) == 0) -***** assert(harmmean([1,2,Inf,NaN]) == 2) -***** assert(harmmean([1,2,-Inf,NaN]) == 2) -warning: test: file /build/reproducible-path/octave-nan-3.7.0/inst/harmmean.m leaked global variables: FLAG_NANS_OCCURED -4 tests, 4 passed, 0 known failure, 0 skipped -[inst/tcdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tcdf.m -***** assert(tcdf(NaN,4),NaN) -***** assert(tcdf(inf,3),1) -2 tests, 2 passed, 0 known failure, 0 skipped -[inst/mean.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/mean.m -***** assert(mean([1,NaN],1),[1,NaN]) -***** assert(mean([1,NaN],2),1) -***** assert(mean([+inf,-inf]),NaN) -***** assert(mean([+0,-0],'h'),NaN) -***** assert(mean([1,4,NaN],'g'),2) -5 tests, 5 passed, 0 known failure, 0 skipped -[inst/median.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/median.m -***** assert(median([1,NaN,3,inf,-inf]),2) -***** assert(median([1,NaN,3,inf,4,-inf]),3) -2 tests, 2 passed, 0 known failure, 0 skipped -[inst/iqr.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/iqr.m -***** assert(iqr([1:5,NaN]) == 2) -***** assert(iqr([1:5,NaN]',1) == 2) -***** assert(iqr([1:5,NaN],2) == 2) -3 tests, 3 passed, 0 known failure, 0 skipped -[inst/load_fisheriris.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/load_fisheriris.m -***** xtest - load_fisheriris - assert(all(size(meas)==[150,4])) - assert(all(size(species)==[150,1])) -!!!!! known failure -__restful_service__: Could not resolve hostname -1 test, 0 passed, 1 known failure, 0 skipped -[inst/sem.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/sem.m -***** assert(sem([1,4,1,NaN]) == 1) -***** assert(sem([1,4,1,NaN]',1) == 1) -***** assert(sem([1,4,1,NaN] ,2) == 1) -3 tests, 3 passed, 0 known failure, 0 skipped -[inst/tpdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tpdf.m -***** assert(tpdf(NaN,4),NaN) -1 test, 1 passed, 0 known failure, 0 skipped -[inst/sumskipnan.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/sumskipnan.m -***** assert(sumskipnan([1,2],1),[1,2]) -***** assert(sumskipnan([1,NaN],2),1) -***** assert(sumskipnan([1,NaN],2),1) -***** assert(sumskipnan([nan,1,4,5]),10) -***** assert(sumskipnan([nan,1,4,5]',1,[3;2;1;0]),6) -5 tests, 5 passed, 0 known failure, 0 skipped -[inst/geomean.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/geomean.m -***** assert(geomean([1,2,4,NaN]) == 2) -***** assert(geomean([1,2,1/2,NaN]) == 1) -***** assert(geomean([1,2,0,NaN]) == 0) -***** assert(geomean([1,2,Inf,NaN]) == Inf) +[inst/histo3.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo3.m +***** assert(getfield(histo3([]),'N'), 0) +***** assert(getfield(histo3(1),'N'), 1) +***** assert(getfield(histo3([1;1]),'H'), 2) +***** assert(getfield(histo3([repmat(NaN,4,2),[1;1;1;3]]),'N')==[0,0,4]) 4 tests, 4 passed, 0 known failure, 0 skipped -[inst/betapdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/betapdf.m -***** shared x,y - x = [-1 0 0.5 1 2]; - y = [0 2 1 0 0]; -***** assert (betapdf (x, ones (1,5), 2*ones (1,5)), y) -***** assert (betapdf (x, 1, 2*ones (1,5)), y) -***** assert (betapdf (x, ones (1,5), 2), y) -***** assert (betapdf (x, [0 NaN 1 1 1], 2), [NaN NaN y(3:5)]) -***** assert (betapdf (x, 1, 2*[0 NaN 1 1 1]), [NaN NaN y(3:5)]) -***** assert (betapdf ([x, NaN], 1, 2), [y, NaN]) -***** assert (betapdf (single ([x, NaN]), 1, 2), single ([y, NaN])) -***** assert (betapdf ([x, NaN], single (1), 2), single ([y, NaN])) -***** assert (betapdf ([x, NaN], 1, single (2)), single ([y, NaN])) -***** test - x = rand (10,1); - y = 1./(pi * sqrt (x.*(1-x))); - assert (betapdf (x, 1/2, 1/2), y, 50*eps); -***** assert (betapdf (0.5, 1000, 1000), 35.678, 1e-3) -***** error betapdf () -***** error betapdf (1) -***** error betapdf (1,2) -***** error betapdf (1,2,3,4) -***** error betapdf (ones (3), ones (2), ones (2)) -***** error betapdf (ones (2), ones (3), ones (2)) -***** error betapdf (ones (2), ones (2), ones (3)) -***** error betapdf (i, 2, 2) -***** error betapdf (2, i, 2) -***** error betapdf (2, 2, i) -21 tests, 21 passed, 0 known failure, 0 skipped -[inst/fishers_exact_test.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/fishers_exact_test.m -***** assert((double(fishers_exact_test(1,1,1,1))-2/3)>>>> /build/reproducible-path/octave-nan-3.7.0/inst/nanstd.m -***** assert(nanstd(0),NaN) +[inst/zscore.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/zscore.m +***** assert(isequaln(zscore([1,1,-1,-1,0,NaN]),[1,1,-1,-1,0,NaN])) +warning: test: file /build/reproducible-path/octave-nan-3.7.0/inst/zscore.m leaked global variables: FLAG_NANS_OCCURED 1 test, 1 passed, 0 known failure, 0 skipped [inst/signrank.m] >>>>> /build/reproducible-path/octave-nan-3.7.0/inst/signrank.m @@ -3630,71 +3556,121 @@ p3 = signrank(X,Y,1,[],3); assert(size(p3,2)==SZ(2) && size(p3,1)==SZ(1)) 16 tests, 16 passed, 0 known failure, 0 skipped -[inst/trimmean.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/trimmean.m -***** assert(trimmean([11.4, 17.3, 21.3, 25.9, 40.1],.2),23.2) +[inst/tpdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tpdf.m +***** assert(tpdf(NaN,4),NaN) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/quantile.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/quantile.m -***** assert(quantile(1:10,[.2,.5]),[2.5, 5.5]) -***** assert(quantile([1:3,NaN],[.10,.50,.90])==[1,2,3]) +[inst/betacdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/betacdf.m +***** shared x,y + x = [-1 0 0.5 1 2]; + y = [0 0 0.75 1 1]; +***** assert (betacdf (x, ones (1,5), 2*ones (1,5)), y) +***** assert (betacdf (x, 1, 2*ones (1,5)), y) +***** assert (betacdf (x, ones (1,5), 2), y) +***** assert (betacdf (x, [0 1 NaN 1 1], 2), [NaN 0 NaN 1 1]) +***** assert (betacdf (x, 1, 2*[0 1 NaN 1 1]), [NaN 0 NaN 1 1]) +***** assert (betacdf ([x(1:2) NaN x(4:5)], 1, 2), [y(1:2) NaN y(4:5)]) +***** assert (betacdf ([x, NaN], 1, 2), [y, NaN]) +***** assert (betacdf (single ([x, NaN]), 1, 2), single ([y, NaN])) +***** assert (betacdf ([x, NaN], single (1), 2), single ([y, NaN])) +***** assert (betacdf ([x, NaN], 1, single (2)), single ([y, NaN])) +***** error betacdf () +***** error betacdf (1) +***** error betacdf (1,2) +***** error betacdf (1,2,3,4) +***** error betacdf (ones (3), ones (2), ones (2)) +***** error betacdf (ones (2), ones (3), ones (2)) +***** error betacdf (ones (2), ones (2), ones (3)) +17 tests, 17 passed, 0 known failure, 0 skipped +[inst/ecdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ecdf.m +***** assert(ecdf(1:2)*2==[0:2]') +***** assert(ecdf([1:2,NaN])*2==[0:3]') 2 tests, 2 passed, 0 known failure, 0 skipped -[inst/trimean.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/trimean.m -***** assert(trimean([1:5,-Inf,Inf,NaN]) == 3) -***** assert(trimean([1:5,-Inf,Inf,NaN]',1) == 3) -***** assert(trimean([1:5,-Inf,Inf,NaN],2) == 3) +[inst/iqr.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/iqr.m +***** assert(iqr([1:5,NaN]) == 2) +***** assert(iqr([1:5,NaN]',1) == 2) +***** assert(iqr([1:5,NaN],2) == 2) 3 tests, 3 passed, 0 known failure, 0 skipped -[inst/zscore.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/zscore.m -***** assert(isequaln(zscore([1,1,-1,-1,0,NaN]),[1,1,-1,-1,0,NaN])) -1 test, 1 passed, 0 known failure, 0 skipped -[inst/nansum.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/nansum.m -***** assert(nansum(NaN),0) +[inst/tcdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tcdf.m +***** assert(tcdf(NaN,4),NaN) +***** assert(tcdf(inf,3),1) +2 tests, 2 passed, 0 known failure, 0 skipped +[inst/normpdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/normpdf.m +***** assert(sum(isnan(normpdf([-inf,-2,-1,-.5,0,.5,1,2,3,inf,nan]',2,0))),1) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/histo4.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo4.m -***** assert(getfield(histo4([]),'N'), 0) -***** assert(getfield(histo4(1),'N'), 1) -***** assert(getfield(histo4([1;1]),'H'), 2) -***** assert(getfield(histo4([repmat(NaN,4,2),[1;1;1;3]]),'N')==4) -4 tests, 4 passed, 0 known failure, 0 skipped +[inst/prctile.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/prctile.m +***** assert(prctile([1:3,NaN],[10,50,90])==[1,2,3]) +***** assert(quantile(1:10,[.2,.5]),[2.5, 5.5]) +2 tests, 2 passed, 0 known failure, 0 skipped +[inst/ranks.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ranks.m +***** shared z, r1, r2 + z = magic (4); + r1 = [4 1 1 4; 2 3 3 2; 3 2 2 3; 1 4 4 1]; + r2 = [4 1 2 3; 1 4 3 2; 3 2 1 4; 2 3 4 1]; +***** assert (ranks(z), r1); +***** assert (ranks(z, 2), r2); + z = nan(2, 2, 2); + z(:, :, 1) = [1 2; 3 4]; + z(:, :, 2) = [4 3; 2 1]; + r1 = cat(3, [1 1; 2 2], [2 2; 1 1]); + r2 = cat(3, [1 2; 1 2], [2 1; 2 1]); +***** assert (ranks(z), r1); +***** assert (ranks(z, 2), r2); +***** assert (ranks(z, 3), r1); +5 tests, 5 passed, 0 known failure, 0 skipped [inst/range.m] >>>>> /build/reproducible-path/octave-nan-3.7.0/inst/range.m ***** assert(range([1:5,NaN]) == 4) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/rms.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/rms.m -***** assert(rms([1,5,1,NaN]) == 3) -***** assert(rms([1,5,1,-Inf,NaN]) == Inf) -2 tests, 2 passed, 0 known failure, 0 skipped -[inst/ttest.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ttest.m -***** test - x = [8:0.1:12,repmat(NaN,1,40)]; - [h, pval, ci] = ttest (x, 10); - assert (h, 0) - assert (pval, 1, 10*eps) - assert (ci, [9.6219 10.3781], 1E-5) - [h, pval, ci0] = ttest (x, 0); - assert (h, 1) - assert (pval, 0) - assert (ci0, ci, 2e-15) - [h, pval, ci] = ttest (x, 10, "tail", "right", "dim", 2, "alpha", 0.05); - assert (h, 0) - assert (pval, 0.5, 10*eps) - assert (ci, [9.68498 Inf], 1E-5) +[inst/center.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/center.m +***** assert(abs(mean(center([5;NaN;3;NaN;NaN;-1]))) < 2*eps) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/normcdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/normcdf.m -***** assert(sum(isnan(normcdf([-inf,-2,-1,-.5,0,.5,1,2,3,inf,nan]',2,0))),1) +[inst/geomean.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/geomean.m +***** assert(geomean([1,2,4,NaN]) == 2) +***** assert(geomean([1,2,1/2,NaN]) == 1) +***** assert(geomean([1,2,0,NaN]) == 0) +***** assert(geomean([1,2,Inf,NaN]) == Inf) +4 tests, 4 passed, 0 known failure, 0 skipped +[inst/load_fisheriris.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/load_fisheriris.m +***** xtest + load_fisheriris + assert(all(size(meas)==[150,4])) + assert(all(size(species)==[150,1])) +!!!!! known failure +__restful_service__: Could not resolve hostname +1 test, 0 passed, 1 known failure, 0 skipped +[inst/tinv.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tinv.m +***** assert(tinv(NaN,4),NaN) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/ecdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ecdf.m -***** assert(ecdf(1:2)*2==[0:2]') -***** assert(ecdf([1:2,NaN])*2==[0:3]') +[inst/median.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/median.m +***** assert(median([1,NaN,3,inf,-inf]),2) +***** assert(median([1,NaN,3,inf,4,-inf]),3) +2 tests, 2 passed, 0 known failure, 0 skipped +[inst/trimmean.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/trimmean.m +***** assert(trimmean([11.4, 17.3, 21.3, 25.9, 40.1],.2),23.2) +1 test, 1 passed, 0 known failure, 0 skipped +[inst/quantile.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/quantile.m +***** assert(quantile(1:10,[.2,.5]),[2.5, 5.5]) +***** assert(quantile([1:3,NaN],[.10,.50,.90])==[1,2,3]) 2 tests, 2 passed, 0 known failure, 0 skipped +[inst/norminv.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/norminv.m +***** assert(sum(~isnan(norminv([-inf,-.2,0,.2,.5,1,2,inf,nan],2,0))),4) +1 test, 1 passed, 0 known failure, 0 skipped [inst/betainv.m] >>>>> /build/reproducible-path/octave-nan-3.7.0/inst/betainv.m ***** shared x @@ -3720,24 +3696,70 @@ ***** error betainv (2, i, 2) ***** error betainv (2, 2, i) 20 tests, 20 passed, 0 known failure, 0 skipped -[inst/histo3.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo3.m -***** assert(getfield(histo3([]),'N'), 0) -***** assert(getfield(histo3(1),'N'), 1) -***** assert(getfield(histo3([1;1]),'H'), 2) -***** assert(getfield(histo3([repmat(NaN,4,2),[1;1;1;3]]),'N')==[0,0,4]) -4 tests, 4 passed, 0 known failure, 0 skipped -[inst/tinv.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/tinv.m -***** assert(tinv(NaN,4),NaN) -1 test, 1 passed, 0 known failure, 0 skipped -[inst/center.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/center.m -***** assert(abs(mean(center([5;NaN;3;NaN;NaN;-1]))) < 2*eps) +[inst/normcdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/normcdf.m +***** assert(sum(isnan(normcdf([-inf,-2,-1,-.5,0,.5,1,2,3,inf,nan]',2,0))),1) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/normpdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/normpdf.m -***** assert(sum(isnan(normpdf([-inf,-2,-1,-.5,0,.5,1,2,3,inf,nan]',2,0))),1) +[inst/histo2.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo2.m +***** assert(getfield(histo2([]),'N'), 0) +***** assert(getfield(histo2(1),'N'), 1) +***** assert(getfield(histo2([1;1]),'H'), 2) +***** assert(getfield(histo2([1;1]),'H'), 2) +***** assert(getfield(histo2([repmat(NaN,4,2),[1;1;1;3]]),'N')==[0,0,4]) +5 tests, 5 passed, 0 known failure, 0 skipped +[inst/betapdf.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/betapdf.m +***** shared x,y + x = [-1 0 0.5 1 2]; + y = [0 2 1 0 0]; +***** assert (betapdf (x, ones (1,5), 2*ones (1,5)), y) +***** assert (betapdf (x, 1, 2*ones (1,5)), y) +***** assert (betapdf (x, ones (1,5), 2), y) +***** assert (betapdf (x, [0 NaN 1 1 1], 2), [NaN NaN y(3:5)]) +***** assert (betapdf (x, 1, 2*[0 NaN 1 1 1]), [NaN NaN y(3:5)]) +***** assert (betapdf ([x, NaN], 1, 2), [y, NaN]) +***** assert (betapdf (single ([x, NaN]), 1, 2), single ([y, NaN])) +***** assert (betapdf ([x, NaN], single (1), 2), single ([y, NaN])) +***** assert (betapdf ([x, NaN], 1, single (2)), single ([y, NaN])) +***** test + x = rand (10,1); + y = 1./(pi * sqrt (x.*(1-x))); + assert (betapdf (x, 1/2, 1/2), y, 50*eps); +***** assert (betapdf (0.5, 1000, 1000), 35.678, 1e-3) +***** error betapdf () +***** error betapdf (1) +***** error betapdf (1,2) +***** error betapdf (1,2,3,4) +***** error betapdf (ones (3), ones (2), ones (2)) +***** error betapdf (ones (2), ones (3), ones (2)) +***** error betapdf (ones (2), ones (2), ones (3)) +***** error betapdf (i, 2, 2) +***** error betapdf (2, i, 2) +***** error betapdf (2, 2, i) +21 tests, 21 passed, 0 known failure, 0 skipped +[inst/sem.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/sem.m +***** assert(sem([1,4,1,NaN]) == 1) +***** assert(sem([1,4,1,NaN]',1) == 1) +***** assert(sem([1,4,1,NaN] ,2) == 1) +3 tests, 3 passed, 0 known failure, 0 skipped +[inst/histo4.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo4.m +***** assert(getfield(histo4([]),'N'), 0) +***** assert(getfield(histo4(1),'N'), 1) +***** assert(getfield(histo4([1;1]),'H'), 2) +***** assert(getfield(histo4([repmat(NaN,4,2),[1;1;1;3]]),'N')==4) +4 tests, 4 passed, 0 known failure, 0 skipped +[inst/trimean.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/trimean.m +***** assert(trimean([1:5,-Inf,Inf,NaN]) == 3) +***** assert(trimean([1:5,-Inf,Inf,NaN]',1) == 3) +***** assert(trimean([1:5,-Inf,Inf,NaN],2) == 3) +3 tests, 3 passed, 0 known failure, 0 skipped +[inst/cat2bin.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/cat2bin.m +***** assert(cat2bin([1;2;5;1;5]),[1,0,0;0,1,0;0,0,1;1,0,0;0,0,1]) 1 test, 1 passed, 0 known failure, 0 skipped [inst/covm.m] >>>>> /build/reproducible-path/octave-nan-3.7.0/inst/covm.m @@ -3745,77 +3767,91 @@ ***** assert(covm([1;NaN;2],'M'),2.5) ***** assert(covm([1;NaN;2],'E'),[1,1.5;1.5,2.5]) 3 tests, 3 passed, 0 known failure, 0 skipped -[inst/betacdf.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/betacdf.m -***** shared x,y - x = [-1 0 0.5 1 2]; - y = [0 0 0.75 1 1]; -***** assert (betacdf (x, ones (1,5), 2*ones (1,5)), y) -***** assert (betacdf (x, 1, 2*ones (1,5)), y) -***** assert (betacdf (x, ones (1,5), 2), y) -***** assert (betacdf (x, [0 1 NaN 1 1], 2), [NaN 0 NaN 1 1]) -***** assert (betacdf (x, 1, 2*[0 1 NaN 1 1]), [NaN 0 NaN 1 1]) -***** assert (betacdf ([x(1:2) NaN x(4:5)], 1, 2), [y(1:2) NaN y(4:5)]) -***** assert (betacdf ([x, NaN], 1, 2), [y, NaN]) -***** assert (betacdf (single ([x, NaN]), 1, 2), single ([y, NaN])) -***** assert (betacdf ([x, NaN], single (1), 2), single ([y, NaN])) -***** assert (betacdf ([x, NaN], 1, single (2)), single ([y, NaN])) -***** error betacdf () -***** error betacdf (1) -***** error betacdf (1,2) -***** error betacdf (1,2,3,4) -***** error betacdf (ones (3), ones (2), ones (2)) -***** error betacdf (ones (2), ones (3), ones (2)) -***** error betacdf (ones (2), ones (2), ones (3)) -17 tests, 17 passed, 0 known failure, 0 skipped -[inst/prctile.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/prctile.m -***** assert(prctile([1:3,NaN],[10,50,90])==[1,2,3]) -***** assert(quantile(1:10,[.2,.5]),[2.5, 5.5]) -2 tests, 2 passed, 0 known failure, 0 skipped -[inst/norminv.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/norminv.m -***** assert(sum(~isnan(norminv([-inf,-.2,0,.2,.5,1,2,inf,nan],2,0))),4) +[inst/nanstd.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/nanstd.m +***** assert(nanstd(0),NaN) 1 test, 1 passed, 0 known failure, 0 skipped -[inst/histo2.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo2.m -***** assert(getfield(histo2([]),'N'), 0) -***** assert(getfield(histo2(1),'N'), 1) -***** assert(getfield(histo2([1;1]),'H'), 2) -***** assert(getfield(histo2([1;1]),'H'), 2) -***** assert(getfield(histo2([repmat(NaN,4,2),[1;1;1;3]]),'N')==[0,0,4]) +[inst/sumskipnan.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/sumskipnan.m +***** assert(sumskipnan([1,2],1),[1,2]) +***** assert(sumskipnan([1,NaN],2),1) +***** assert(sumskipnan([1,NaN],2),1) +***** assert(sumskipnan([nan,1,4,5]),10) +***** assert(sumskipnan([nan,1,4,5]',1,[3;2;1;0]),6) 5 tests, 5 passed, 0 known failure, 0 skipped +[inst/fishers_exact_test.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/fishers_exact_test.m +***** assert((double(fishers_exact_test(1,1,1,1))-2/3)>>>> /build/reproducible-path/octave-nan-3.7.0/inst/nansum.m +***** assert(nansum(NaN),0) +1 test, 1 passed, 0 known failure, 0 skipped +[inst/rms.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/rms.m +***** assert(rms([1,5,1,NaN]) == 3) +***** assert(rms([1,5,1,-Inf,NaN]) == Inf) +2 tests, 2 passed, 0 known failure, 0 skipped [inst/histo.m] >>>>> /build/reproducible-path/octave-nan-3.7.0/inst/histo.m ***** assert(issorted(getfield(histo_mex([5;NaN;3;NaN;-1;inf;-inf;4]),'X'))) ***** assert(sum(getfield(histo_mex([5;NaN;3;NaN;NaN;-1;inf;-inf;4]),'H'))==9) 2 tests, 2 passed, 0 known failure, 0 skipped -[inst/cat2bin.m] ->>>>> /build/reproducible-path/octave-nan-3.7.0/inst/cat2bin.m -***** assert(cat2bin([1;2;5;1;5]),[1,0,0;0,1,0;0,0,1;1,0,0;0,0,1]) +[inst/harmmean.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/harmmean.m +***** assert(harmmean([1,1/4,1,NaN]) == 0.5) +***** assert(harmmean([1,2,0,NaN]) == 0) +***** assert(harmmean([1,2,Inf,NaN]) == 2) +***** assert(harmmean([1,2,-Inf,NaN]) == 2) +4 tests, 4 passed, 0 known failure, 0 skipped +[inst/ttest.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/ttest.m +***** test + x = [8:0.1:12,repmat(NaN,1,40)]; + [h, pval, ci] = ttest (x, 10); + assert (h, 0) + assert (pval, 1, 10*eps) + assert (ci, [9.6219 10.3781], 1E-5) + [h, pval, ci0] = ttest (x, 0); + assert (h, 1) + assert (pval, 0) + assert (ci0, ci, 2e-15) + [h, pval, ci] = ttest (x, 10, "tail", "right", "dim", 2, "alpha", 0.05); + assert (h, 0) + assert (pval, 0.5, 10*eps) + assert (ci, [9.68498 Inf], 1E-5) 1 test, 1 passed, 0 known failure, 0 skipped +[inst/mean.m] +>>>>> /build/reproducible-path/octave-nan-3.7.0/inst/mean.m +***** assert(mean([1,NaN],1),[1,NaN]) +***** assert(mean([1,NaN],2),1) +***** assert(mean([+inf,-inf]),NaN) +***** assert(mean([+0,-0],'h'),NaN) +***** assert(mean([1,4,NaN],'g'),2) +5 tests, 5 passed, 0 known failure, 0 skipped Checking C++ files ... Run tests in debian/check.m Testing test_mex_accuracy.m -hostname: infom01-amd64 +hostname: i-capture-the-hostname Sum squared differences between accuracy levels: Level: |(0) naive-dou |(1) naive-ext |(2) kahan-dou | (3) kahan-ext error: |N*2^-52 |N*2^-64 | 2^-52 | 2^-64 COVM_MEX: -time: |0.054515 |0.114242 | 0.204800 | 0.465582 | 0.561797 -ntime: |0.097037 |0.203351 | 0.364545 | 0.828737 -(0) | 0 |1.03915e+07 |1.03914e+07 |1.03914e+07 -(1) |1.03915e+07 | 0 | 10.4858 | 10.4858 -(2) |1.03914e+07 | 10.4858 | 0 | 0 -(3) |1.03914e+07 | 10.4858 | 0 | 0 +time: |0.189583 |0.155757 | 0.276456 | 0.631946 | 0.728612 +ntime: |0.260198 |0.213772 | 0.379428 | 0.867328 +(0) | 0 |5.4286e+06 |5.42774e+06 |5.42774e+06 +(1) |5.4286e+06 | 0 | 7.13032 | 7.13032 +(2) |5.42774e+06 | 7.13032 | 0 | 0 +(3) |5.42774e+06 | 7.13032 | 0 | 0 SUMSKIPNAN_MEX: -time: |0.010744 |0.023979 | 0.047734 | 0.094195 | 0.102010 -ntime: |0.105322 |0.235065 | 0.467935 | 0.923391 -(0) | 0 |4.80801e-07 |4.8053e-07 |4.8053e-07 -(1) |4.80801e-07 | 0 |7.62939e-13 |7.62939e-13 -(2) |4.8053e-07 |7.62939e-13 | 0 | 0 -(3) |4.8053e-07 |7.62939e-13 | 0 | 0 +time: |0.020669 |0.036823 | 0.066397 | 0.155939 | 0.130981 +ntime: |0.157801 |0.281133 | 0.506921 | 1.190548 +(0) | 0 |5.5085e-07 |5.51139e-07 |5.51139e-07 +(1) |5.5085e-07 | 0 |3.8147e-13 |3.8147e-13 +(2) |5.51139e-07 |3.8147e-13 | 0 | 0 +(3) |5.51139e-07 |3.8147e-13 | 0 | 0 Testing test_train_sc.m REG REG2 @@ -3880,12 +3916,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2274263/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3460018 and its subdirectories -I: Current time: Mon Feb 24 22:31:19 -12 2025 -I: pbuilder-time-stamp: 1740479479 +I: removing directory /srv/workspace/pbuilder/2274263 and its subdirectories +I: Current time: Tue Mar 31 06:59:47 +14 2026 +I: pbuilder-time-stamp: 1774889987