Diff of the two buildlogs: -- --- b1/build.log 2025-07-20 20:25:55.930929477 +0000 +++ b2/build.log 2025-07-20 20:36:08.551714238 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Aug 22 14:38:41 -12 2026 -I: pbuilder-time-stamp: 1787452721 +I: Current time: Mon Jul 21 10:25:57 +14 2025 +I: pbuilder-time-stamp: 1753043157 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -36,51 +36,83 @@ dpkg-source: info: applying soften-psutil I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/287123/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 20 20:26 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='653110b0715a474fa930fba277a14fbf' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='287123' - PS1='# ' - PS2='> ' + INVOCATION_ID=f96ee69152df482d9458d95aeb94c2ba + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1424951 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sMK9rvsa/pbuilderrc_vn9y --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sMK9rvsa/b1 --logfile b1/build.log toil_8.0.0-5.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sMK9rvsa/pbuilderrc_I3CS --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sMK9rvsa/b2 --logfile b2/build.log toil_8.0.0-5.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.12.33+deb12-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.33-1~bpo12+1 (2025-07-09) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-37-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/287123/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -416,7 +448,7 @@ Get: 241 http://deb.debian.org/debian trixie/main amd64 python3-stubserver all 1.1-4 [7764 B] Get: 242 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2025.2-3 [4280 B] Get: 243 http://deb.debian.org/debian trixie/main amd64 python3-wdlparse all 0.1.0-3 [66.1 kB] -Fetched 162 MB in 5s (30.4 MB/s) +Fetched 162 MB in 2s (80.5 MB/s) Preconfiguring packages ... Selecting previously unselected package runc. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) @@ -1200,8 +1232,8 @@ Setting up tzdata (2025b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Aug 23 02:40:48 UTC 2026. -Universal Time is now: Sun Aug 23 02:40:48 UTC 2026. +Local time is now: Sun Jul 20 20:29:20 UTC 2025. +Universal Time is now: Sun Jul 20 20:29:20 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -1439,7 +1471,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/toil-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../toil_8.0.0-5_source.changes +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/toil-8.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../toil_8.0.0-5_source.changes dpkg-buildpackage: info: source package toil dpkg-buildpackage: info: source version 8.0.0-5 dpkg-buildpackage: info: source distribution unstable @@ -1483,251 +1519,251 @@ running build running build_py creating build/lib/toil +copying src/toil/statsAndLogging.py -> build/lib/toil +copying src/toil/exceptions.py -> build/lib/toil +copying src/toil/realtimeLogger.py -> build/lib/toil +copying src/toil/version.py -> build/lib/toil copying src/toil/bus.py -> build/lib/toil +copying src/toil/leader.py -> build/lib/toil +copying src/toil/toilState.py -> build/lib/toil +copying src/toil/job.py -> build/lib/toil copying src/toil/common.py -> build/lib/toil -copying src/toil/serviceManager.py -> build/lib/toil copying src/toil/resource.py -> build/lib/toil -copying src/toil/statsAndLogging.py -> build/lib/toil copying src/toil/worker.py -> build/lib/toil -copying src/toil/realtimeLogger.py -> build/lib/toil -copying src/toil/deferred.py -> build/lib/toil -copying src/toil/toilState.py -> build/lib/toil +copying src/toil/serviceManager.py -> build/lib/toil copying src/toil/__init__.py -> build/lib/toil -copying src/toil/leader.py -> build/lib/toil -copying src/toil/exceptions.py -> build/lib/toil -copying src/toil/job.py -> build/lib/toil -copying src/toil/version.py -> build/lib/toil -creating build/lib/toil/cwl -copying src/toil/cwl/utils.py -> build/lib/toil/cwl -copying src/toil/cwl/cwltoil.py -> build/lib/toil/cwl -copying src/toil/cwl/__init__.py -> build/lib/toil/cwl -copying src/toil/cwl/conftest.py -> build/lib/toil/cwl +copying src/toil/deferred.py -> build/lib/toil +creating build/lib/toil/fileStores +copying src/toil/fileStores/nonCachingFileStore.py -> build/lib/toil/fileStores +copying src/toil/fileStores/abstractFileStore.py -> build/lib/toil/fileStores +copying src/toil/fileStores/__init__.py -> build/lib/toil/fileStores +copying src/toil/fileStores/cachingFileStore.py -> build/lib/toil/fileStores +creating build/lib/toil/server +copying src/toil/server/wsgi_app.py -> build/lib/toil/server +copying src/toil/server/utils.py -> build/lib/toil/server +copying src/toil/server/app.py -> build/lib/toil/server +copying src/toil/server/__init__.py -> build/lib/toil/server +copying src/toil/server/celery_app.py -> build/lib/toil/server +creating build/lib/toil/lib +copying src/toil/lib/throttle.py -> build/lib/toil/lib +copying src/toil/lib/ftp_utils.py -> build/lib/toil/lib +copying src/toil/lib/memoize.py -> build/lib/toil/lib +copying src/toil/lib/exceptions.py -> build/lib/toil/lib +copying src/toil/lib/iterables.py -> build/lib/toil/lib +copying src/toil/lib/generatedEC2Lists.py -> build/lib/toil/lib +copying src/toil/lib/retry.py -> build/lib/toil/lib +copying src/toil/lib/misc.py -> build/lib/toil/lib +copying src/toil/lib/compatibility.py -> build/lib/toil/lib +copying src/toil/lib/threading.py -> build/lib/toil/lib +copying src/toil/lib/humanize.py -> build/lib/toil/lib +copying src/toil/lib/docker.py -> build/lib/toil/lib +copying src/toil/lib/accelerators.py -> build/lib/toil/lib +copying src/toil/lib/conversions.py -> build/lib/toil/lib +copying src/toil/lib/io.py -> build/lib/toil/lib +copying src/toil/lib/resources.py -> build/lib/toil/lib +copying src/toil/lib/__init__.py -> build/lib/toil/lib +copying src/toil/lib/bioio.py -> build/lib/toil/lib +copying src/toil/lib/integration.py -> build/lib/toil/lib +copying src/toil/lib/ec2.py -> build/lib/toil/lib +copying src/toil/lib/expando.py -> build/lib/toil/lib +copying src/toil/lib/objects.py -> build/lib/toil/lib +copying src/toil/lib/ec2nodes.py -> build/lib/toil/lib creating build/lib/toil/jobStores +copying src/toil/jobStores/googleJobStore.py -> build/lib/toil/jobStores copying src/toil/jobStores/abstractJobStore.py -> build/lib/toil/jobStores copying src/toil/jobStores/utils.py -> build/lib/toil/jobStores copying src/toil/jobStores/fileJobStore.py -> build/lib/toil/jobStores -copying src/toil/jobStores/__init__.py -> build/lib/toil/jobStores copying src/toil/jobStores/conftest.py -> build/lib/toil/jobStores -copying src/toil/jobStores/googleJobStore.py -> build/lib/toil/jobStores +copying src/toil/jobStores/__init__.py -> build/lib/toil/jobStores creating build/lib/toil/test copying src/toil/test/__init__.py -> build/lib/toil/test +creating build/lib/toil/wdl +copying src/toil/wdl/wdltoil.py -> build/lib/toil/wdl +copying src/toil/wdl/utils.py -> build/lib/toil/wdl +copying src/toil/wdl/__init__.py -> build/lib/toil/wdl creating build/lib/toil/utils -copying src/toil/utils/toilSshCluster.py -> build/lib/toil/utils -copying src/toil/utils/toilStatus.py -> build/lib/toil/utils -copying src/toil/utils/toilDebugJob.py -> build/lib/toil/utils -copying src/toil/utils/toilDestroyCluster.py -> build/lib/toil/utils -copying src/toil/utils/toilStats.py -> build/lib/toil/utils -copying src/toil/utils/toilDebugFile.py -> build/lib/toil/utils -copying src/toil/utils/toilLaunchCluster.py -> build/lib/toil/utils -copying src/toil/utils/__init__.py -> build/lib/toil/utils +copying src/toil/utils/toilUpdateEC2Instances.py -> build/lib/toil/utils copying src/toil/utils/toilClean.py -> build/lib/toil/utils copying src/toil/utils/toilMain.py -> build/lib/toil/utils -copying src/toil/utils/toilRsyncCluster.py -> build/lib/toil/utils -copying src/toil/utils/toilUpdateEC2Instances.py -> build/lib/toil/utils -copying src/toil/utils/toilConfig.py -> build/lib/toil/utils +copying src/toil/utils/toilDebugFile.py -> build/lib/toil/utils +copying src/toil/utils/toilDestroyCluster.py -> build/lib/toil/utils +copying src/toil/utils/toilLaunchCluster.py -> build/lib/toil/utils copying src/toil/utils/toilKill.py -> build/lib/toil/utils +copying src/toil/utils/toilDebugJob.py -> build/lib/toil/utils +copying src/toil/utils/toilRsyncCluster.py -> build/lib/toil/utils +copying src/toil/utils/toilStatus.py -> build/lib/toil/utils +copying src/toil/utils/toilStats.py -> build/lib/toil/utils +copying src/toil/utils/__init__.py -> build/lib/toil/utils copying src/toil/utils/toilServer.py -> build/lib/toil/utils -creating build/lib/toil/server -copying src/toil/server/utils.py -> build/lib/toil/server -copying src/toil/server/__init__.py -> build/lib/toil/server -copying src/toil/server/celery_app.py -> build/lib/toil/server -copying src/toil/server/wsgi_app.py -> build/lib/toil/server -copying src/toil/server/app.py -> build/lib/toil/server +copying src/toil/utils/toilSshCluster.py -> build/lib/toil/utils +copying src/toil/utils/toilConfig.py -> build/lib/toil/utils creating build/lib/toil/provisioners -copying src/toil/provisioners/abstractProvisioner.py -> build/lib/toil/provisioners copying src/toil/provisioners/clusterScaler.py -> build/lib/toil/provisioners -copying src/toil/provisioners/gceProvisioner.py -> build/lib/toil/provisioners -copying src/toil/provisioners/__init__.py -> build/lib/toil/provisioners copying src/toil/provisioners/node.py -> build/lib/toil/provisioners -creating build/lib/toil/fileStores -copying src/toil/fileStores/cachingFileStore.py -> build/lib/toil/fileStores -copying src/toil/fileStores/abstractFileStore.py -> build/lib/toil/fileStores -copying src/toil/fileStores/__init__.py -> build/lib/toil/fileStores -copying src/toil/fileStores/nonCachingFileStore.py -> build/lib/toil/fileStores -creating build/lib/toil/lib -copying src/toil/lib/misc.py -> build/lib/toil/lib -copying src/toil/lib/docker.py -> build/lib/toil/lib -copying src/toil/lib/ec2.py -> build/lib/toil/lib -copying src/toil/lib/integration.py -> build/lib/toil/lib -copying src/toil/lib/objects.py -> build/lib/toil/lib -copying src/toil/lib/memoize.py -> build/lib/toil/lib -copying src/toil/lib/retry.py -> build/lib/toil/lib -copying src/toil/lib/threading.py -> build/lib/toil/lib -copying src/toil/lib/humanize.py -> build/lib/toil/lib -copying src/toil/lib/iterables.py -> build/lib/toil/lib -copying src/toil/lib/throttle.py -> build/lib/toil/lib -copying src/toil/lib/ftp_utils.py -> build/lib/toil/lib -copying src/toil/lib/accelerators.py -> build/lib/toil/lib -copying src/toil/lib/compatibility.py -> build/lib/toil/lib -copying src/toil/lib/__init__.py -> build/lib/toil/lib -copying src/toil/lib/exceptions.py -> build/lib/toil/lib -copying src/toil/lib/generatedEC2Lists.py -> build/lib/toil/lib -copying src/toil/lib/io.py -> build/lib/toil/lib -copying src/toil/lib/expando.py -> build/lib/toil/lib -copying src/toil/lib/ec2nodes.py -> build/lib/toil/lib -copying src/toil/lib/resources.py -> build/lib/toil/lib -copying src/toil/lib/conversions.py -> build/lib/toil/lib -copying src/toil/lib/bioio.py -> build/lib/toil/lib +copying src/toil/provisioners/abstractProvisioner.py -> build/lib/toil/provisioners +copying src/toil/provisioners/__init__.py -> build/lib/toil/provisioners +copying src/toil/provisioners/gceProvisioner.py -> build/lib/toil/provisioners +creating build/lib/toil/options +copying src/toil/options/wdl.py -> build/lib/toil/options +copying src/toil/options/common.py -> build/lib/toil/options +copying src/toil/options/__init__.py -> build/lib/toil/options +copying src/toil/options/runner.py -> build/lib/toil/options +copying src/toil/options/cwl.py -> build/lib/toil/options +creating build/lib/toil/cwl +copying src/toil/cwl/utils.py -> build/lib/toil/cwl +copying src/toil/cwl/cwltoil.py -> build/lib/toil/cwl +copying src/toil/cwl/conftest.py -> build/lib/toil/cwl +copying src/toil/cwl/__init__.py -> build/lib/toil/cwl creating build/lib/toil/batchSystems +copying src/toil/batchSystems/awsBatch.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/contained_executor.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/singleMachine.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/kubernetes.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/contained_executor.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/local_support.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/lsf.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/abstractBatchSystem.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/torque.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/slurm.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/awsBatch.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/__init__.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/gridengine.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/registry.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/cleanup_support.py -> build/lib/toil/batchSystems -copying src/toil/batchSystems/options.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/lsfHelper.py -> build/lib/toil/batchSystems copying src/toil/batchSystems/htcondor.py -> build/lib/toil/batchSystems -creating build/lib/toil/wdl -copying src/toil/wdl/utils.py -> build/lib/toil/wdl -copying src/toil/wdl/wdltoil.py -> build/lib/toil/wdl -copying src/toil/wdl/__init__.py -> build/lib/toil/wdl -creating build/lib/toil/options -copying src/toil/options/common.py -> build/lib/toil/options -copying src/toil/options/cwl.py -> build/lib/toil/options -copying src/toil/options/runner.py -> build/lib/toil/options -copying src/toil/options/__init__.py -> build/lib/toil/options -copying src/toil/options/wdl.py -> build/lib/toil/options +copying src/toil/batchSystems/options.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/cleanup_support.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/torque.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/registry.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/local_support.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/__init__.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/abstractBatchSystem.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/gridengine.py -> build/lib/toil/batchSystems +copying src/toil/batchSystems/lsf.py -> build/lib/toil/batchSystems +creating build/lib/toil/server/api_spec +copying src/toil/server/api_spec/__init__.py -> build/lib/toil/server/api_spec +creating build/lib/toil/server/cli +copying src/toil/server/cli/wes_cwl_runner.py -> build/lib/toil/server/cli +copying src/toil/server/cli/__init__.py -> build/lib/toil/server/cli +creating build/lib/toil/server/wes +copying src/toil/server/wes/amazon_wes_utils.py -> build/lib/toil/server/wes +copying src/toil/server/wes/tasks.py -> build/lib/toil/server/wes +copying src/toil/server/wes/abstract_backend.py -> build/lib/toil/server/wes +copying src/toil/server/wes/toil_backend.py -> build/lib/toil/server/wes +copying src/toil/server/wes/__init__.py -> build/lib/toil/server/wes +creating build/lib/toil/lib/encryption +copying src/toil/lib/encryption/_dummy.py -> build/lib/toil/lib/encryption +copying src/toil/lib/encryption/_nacl.py -> build/lib/toil/lib/encryption +copying src/toil/lib/encryption/conftest.py -> build/lib/toil/lib/encryption +copying src/toil/lib/encryption/__init__.py -> build/lib/toil/lib/encryption +creating build/lib/toil/lib/aws +copying src/toil/lib/aws/s3.py -> build/lib/toil/lib/aws +copying src/toil/lib/aws/ami.py -> build/lib/toil/lib/aws +copying src/toil/lib/aws/session.py -> build/lib/toil/lib/aws +copying src/toil/lib/aws/utils.py -> build/lib/toil/lib/aws +copying src/toil/lib/aws/__init__.py -> build/lib/toil/lib/aws +copying src/toil/lib/aws/iam.py -> build/lib/toil/lib/aws creating build/lib/toil/jobStores/aws -copying src/toil/jobStores/aws/utils.py -> build/lib/toil/jobStores/aws copying src/toil/jobStores/aws/jobStore.py -> build/lib/toil/jobStores/aws +copying src/toil/jobStores/aws/utils.py -> build/lib/toil/jobStores/aws copying src/toil/jobStores/aws/__init__.py -> build/lib/toil/jobStores/aws -creating build/lib/toil/test/cwl -copying src/toil/test/cwl/cwlTest.py -> build/lib/toil/test/cwl -copying src/toil/test/cwl/__init__.py -> build/lib/toil/test/cwl -copying src/toil/test/cwl/conftest.py -> build/lib/toil/test/cwl +creating build/lib/toil/test/server +copying src/toil/test/server/__init__.py -> build/lib/toil/test/server +copying src/toil/test/server/serverTest.py -> build/lib/toil/test/server +creating build/lib/toil/test/lib +copying src/toil/test/lib/test_misc.py -> build/lib/toil/test/lib +copying src/toil/test/lib/dockerTest.py -> build/lib/toil/test/lib +copying src/toil/test/lib/test_ec2.py -> build/lib/toil/test/lib +copying src/toil/test/lib/test_integration.py -> build/lib/toil/test/lib +copying src/toil/test/lib/__init__.py -> build/lib/toil/test/lib +copying src/toil/test/lib/test_conversions.py -> build/lib/toil/test/lib +creating build/lib/toil/test/jobStores +copying src/toil/test/jobStores/__init__.py -> build/lib/toil/test/jobStores +copying src/toil/test/jobStores/jobStoreTest.py -> build/lib/toil/test/jobStores +creating build/lib/toil/test/cactus +copying src/toil/test/cactus/test_cactus_integration.py -> build/lib/toil/test/cactus +copying src/toil/test/cactus/__init__.py -> build/lib/toil/test/cactus creating build/lib/toil/test/src -copying src/toil/test/src/dockerCheckTest.py -> build/lib/toil/test/src -copying src/toil/test/src/toilContextManagerTest.py -> build/lib/toil/test/src -copying src/toil/test/src/promisesTest.py -> build/lib/toil/test/src -copying src/toil/test/src/fileStoreTest.py -> build/lib/toil/test/src -copying src/toil/test/src/userDefinedJobArgTypeTest.py -> build/lib/toil/test/src -copying src/toil/test/src/threadingTest.py -> build/lib/toil/test/src copying src/toil/test/src/resourceTest.py -> build/lib/toil/test/src -copying src/toil/test/src/promisedRequirementTest.py -> build/lib/toil/test/src -copying src/toil/test/src/helloWorldTest.py -> build/lib/toil/test/src -copying src/toil/test/src/busTest.py -> build/lib/toil/test/src copying src/toil/test/src/environmentTest.py -> build/lib/toil/test/src -copying src/toil/test/src/workerTest.py -> build/lib/toil/test/src -copying src/toil/test/src/jobFileStoreTest.py -> build/lib/toil/test/src -copying src/toil/test/src/jobEncapsulationTest.py -> build/lib/toil/test/src -copying src/toil/test/src/resumabilityTest.py -> build/lib/toil/test/src +copying src/toil/test/src/userDefinedJobArgTypeTest.py -> build/lib/toil/test/src +copying src/toil/test/src/busTest.py -> build/lib/toil/test/src +copying src/toil/test/src/jobServiceTest.py -> build/lib/toil/test/src +copying src/toil/test/src/helloWorldTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobTest.py -> build/lib/toil/test/src +copying src/toil/test/src/jobFileStoreTest.py -> build/lib/toil/test/src copying src/toil/test/src/jobDescriptionTest.py -> build/lib/toil/test/src +copying src/toil/test/src/jobEncapsulationTest.py -> build/lib/toil/test/src +copying src/toil/test/src/promisedRequirementTest.py -> build/lib/toil/test/src copying src/toil/test/src/miscTests.py -> build/lib/toil/test/src -copying src/toil/test/src/importExportFileTest.py -> build/lib/toil/test/src -copying src/toil/test/src/autoDeploymentTest.py -> build/lib/toil/test/src -copying src/toil/test/src/__init__.py -> build/lib/toil/test/src +copying src/toil/test/src/realtimeLoggerTest.py -> build/lib/toil/test/src +copying src/toil/test/src/checkpointTest.py -> build/lib/toil/test/src +copying src/toil/test/src/toilContextManagerTest.py -> build/lib/toil/test/src +copying src/toil/test/src/dockerCheckTest.py -> build/lib/toil/test/src +copying src/toil/test/src/regularLogTest.py -> build/lib/toil/test/src +copying src/toil/test/src/promisesTest.py -> build/lib/toil/test/src copying src/toil/test/src/restartDAGTest.py -> build/lib/toil/test/src -copying src/toil/test/src/systemTest.py -> build/lib/toil/test/src +copying src/toil/test/src/__init__.py -> build/lib/toil/test/src +copying src/toil/test/src/importExportFileTest.py -> build/lib/toil/test/src copying src/toil/test/src/retainTempDirTest.py -> build/lib/toil/test/src -copying src/toil/test/src/jobServiceTest.py -> build/lib/toil/test/src -copying src/toil/test/src/checkpointTest.py -> build/lib/toil/test/src +copying src/toil/test/src/fileStoreTest.py -> build/lib/toil/test/src +copying src/toil/test/src/resumabilityTest.py -> build/lib/toil/test/src +copying src/toil/test/src/systemTest.py -> build/lib/toil/test/src +copying src/toil/test/src/workerTest.py -> build/lib/toil/test/src +copying src/toil/test/src/autoDeploymentTest.py -> build/lib/toil/test/src +copying src/toil/test/src/threadingTest.py -> build/lib/toil/test/src copying src/toil/test/src/deferredFunctionTest.py -> build/lib/toil/test/src -copying src/toil/test/src/realtimeLoggerTest.py -> build/lib/toil/test/src -copying src/toil/test/src/regularLogTest.py -> build/lib/toil/test/src -creating build/lib/toil/test/jobStores -copying src/toil/test/jobStores/jobStoreTest.py -> build/lib/toil/test/jobStores -copying src/toil/test/jobStores/__init__.py -> build/lib/toil/test/jobStores -creating build/lib/toil/test/cactus -copying src/toil/test/cactus/test_cactus_integration.py -> build/lib/toil/test/cactus -copying src/toil/test/cactus/__init__.py -> build/lib/toil/test/cactus +creating build/lib/toil/test/wdl +copying src/toil/test/wdl/wdltoil_test.py -> build/lib/toil/test/wdl +copying src/toil/test/wdl/__init__.py -> build/lib/toil/test/wdl +copying src/toil/test/wdl/wdltoil_test_kubernetes.py -> build/lib/toil/test/wdl +creating build/lib/toil/test/mesos +copying src/toil/test/mesos/stress.py -> build/lib/toil/test/mesos +copying src/toil/test/mesos/helloWorld.py -> build/lib/toil/test/mesos +copying src/toil/test/mesos/MesosDataStructuresTest.py -> build/lib/toil/test/mesos +copying src/toil/test/mesos/__init__.py -> build/lib/toil/test/mesos creating build/lib/toil/test/utils -copying src/toil/test/utils/toilKillTest.py -> build/lib/toil/test/utils copying src/toil/test/utils/utilsTest.py -> build/lib/toil/test/utils -copying src/toil/test/utils/__init__.py -> build/lib/toil/test/utils copying src/toil/test/utils/toilDebugTest.py -> build/lib/toil/test/utils -creating build/lib/toil/test/server -copying src/toil/test/server/__init__.py -> build/lib/toil/test/server -copying src/toil/test/server/serverTest.py -> build/lib/toil/test/server +copying src/toil/test/utils/toilKillTest.py -> build/lib/toil/test/utils +copying src/toil/test/utils/__init__.py -> build/lib/toil/test/utils creating build/lib/toil/test/provisioners +copying src/toil/test/provisioners/provisionerTest.py -> build/lib/toil/test/provisioners +copying src/toil/test/provisioners/restartScript.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/clusterTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/clusterScalerTest.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/__init__.py -> build/lib/toil/test/provisioners copying src/toil/test/provisioners/gceProvisionerTest.py -> build/lib/toil/test/provisioners -copying src/toil/test/provisioners/provisionerTest.py -> build/lib/toil/test/provisioners -copying src/toil/test/provisioners/restartScript.py -> build/lib/toil/test/provisioners -creating build/lib/toil/test/lib -copying src/toil/test/lib/test_conversions.py -> build/lib/toil/test/lib -copying src/toil/test/lib/dockerTest.py -> build/lib/toil/test/lib -copying src/toil/test/lib/test_ec2.py -> build/lib/toil/test/lib -copying src/toil/test/lib/__init__.py -> build/lib/toil/test/lib -copying src/toil/test/lib/test_integration.py -> build/lib/toil/test/lib -copying src/toil/test/lib/test_misc.py -> build/lib/toil/test/lib +creating build/lib/toil/test/docs +copying src/toil/test/docs/__init__.py -> build/lib/toil/test/docs +copying src/toil/test/docs/scriptsTest.py -> build/lib/toil/test/docs +creating build/lib/toil/test/options +copying src/toil/test/options/options.py -> build/lib/toil/test/options +copying src/toil/test/options/__init__.py -> build/lib/toil/test/options +creating build/lib/toil/test/sort +copying src/toil/test/sort/restart_sort.py -> build/lib/toil/test/sort +copying src/toil/test/sort/sort.py -> build/lib/toil/test/sort +copying src/toil/test/sort/__init__.py -> build/lib/toil/test/sort +copying src/toil/test/sort/sortTest.py -> build/lib/toil/test/sort +creating build/lib/toil/test/cwl +copying src/toil/test/cwl/cwlTest.py -> build/lib/toil/test/cwl +copying src/toil/test/cwl/conftest.py -> build/lib/toil/test/cwl +copying src/toil/test/cwl/__init__.py -> build/lib/toil/test/cwl creating build/lib/toil/test/batchSystems +copying src/toil/test/batchSystems/test_slurm.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/test_lsf_helper.py -> build/lib/toil/test/batchSystems -copying src/toil/test/batchSystems/batch_system_plugin_test.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/test_gridengine.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/batchSystemTest.py -> build/lib/toil/test/batchSystems +copying src/toil/test/batchSystems/batch_system_plugin_test.py -> build/lib/toil/test/batchSystems copying src/toil/test/batchSystems/__init__.py -> build/lib/toil/test/batchSystems -copying src/toil/test/batchSystems/test_slurm.py -> build/lib/toil/test/batchSystems -creating build/lib/toil/test/wdl -copying src/toil/test/wdl/wdltoil_test.py -> build/lib/toil/test/wdl -copying src/toil/test/wdl/wdltoil_test_kubernetes.py -> build/lib/toil/test/wdl -copying src/toil/test/wdl/__init__.py -> build/lib/toil/test/wdl -creating build/lib/toil/test/sort -copying src/toil/test/sort/restart_sort.py -> build/lib/toil/test/sort -copying src/toil/test/sort/sort.py -> build/lib/toil/test/sort -copying src/toil/test/sort/sortTest.py -> build/lib/toil/test/sort -copying src/toil/test/sort/__init__.py -> build/lib/toil/test/sort -creating build/lib/toil/test/mesos -copying src/toil/test/mesos/MesosDataStructuresTest.py -> build/lib/toil/test/mesos -copying src/toil/test/mesos/__init__.py -> build/lib/toil/test/mesos -copying src/toil/test/mesos/helloWorld.py -> build/lib/toil/test/mesos -copying src/toil/test/mesos/stress.py -> build/lib/toil/test/mesos -creating build/lib/toil/test/options -copying src/toil/test/options/__init__.py -> build/lib/toil/test/options -copying src/toil/test/options/options.py -> build/lib/toil/test/options -creating build/lib/toil/test/docs -copying src/toil/test/docs/scriptsTest.py -> build/lib/toil/test/docs -copying src/toil/test/docs/__init__.py -> build/lib/toil/test/docs -creating build/lib/toil/test/provisioners/aws -copying src/toil/test/provisioners/aws/awsProvisionerTest.py -> build/lib/toil/test/provisioners/aws -copying src/toil/test/provisioners/aws/__init__.py -> build/lib/toil/test/provisioners/aws creating build/lib/toil/test/lib/aws +copying src/toil/test/lib/aws/test_utils.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/test_s3.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/test_iam.py -> build/lib/toil/test/lib/aws copying src/toil/test/lib/aws/__init__.py -> build/lib/toil/test/lib/aws -copying src/toil/test/lib/aws/test_utils.py -> build/lib/toil/test/lib/aws -creating build/lib/toil/server/cli -copying src/toil/server/cli/__init__.py -> build/lib/toil/server/cli -copying src/toil/server/cli/wes_cwl_runner.py -> build/lib/toil/server/cli -creating build/lib/toil/server/wes -copying src/toil/server/wes/tasks.py -> build/lib/toil/server/wes -copying src/toil/server/wes/amazon_wes_utils.py -> build/lib/toil/server/wes -copying src/toil/server/wes/toil_backend.py -> build/lib/toil/server/wes -copying src/toil/server/wes/__init__.py -> build/lib/toil/server/wes -copying src/toil/server/wes/abstract_backend.py -> build/lib/toil/server/wes -creating build/lib/toil/server/api_spec -copying src/toil/server/api_spec/__init__.py -> build/lib/toil/server/api_spec +creating build/lib/toil/test/provisioners/aws +copying src/toil/test/provisioners/aws/awsProvisionerTest.py -> build/lib/toil/test/provisioners/aws +copying src/toil/test/provisioners/aws/__init__.py -> build/lib/toil/test/provisioners/aws creating build/lib/toil/provisioners/aws -copying src/toil/provisioners/aws/awsProvisioner.py -> build/lib/toil/provisioners/aws copying src/toil/provisioners/aws/__init__.py -> build/lib/toil/provisioners/aws -creating build/lib/toil/lib/encryption -copying src/toil/lib/encryption/_dummy.py -> build/lib/toil/lib/encryption -copying src/toil/lib/encryption/__init__.py -> build/lib/toil/lib/encryption -copying src/toil/lib/encryption/conftest.py -> build/lib/toil/lib/encryption -copying src/toil/lib/encryption/_nacl.py -> build/lib/toil/lib/encryption -creating build/lib/toil/lib/aws -copying src/toil/lib/aws/utils.py -> build/lib/toil/lib/aws -copying src/toil/lib/aws/ami.py -> build/lib/toil/lib/aws -copying src/toil/lib/aws/__init__.py -> build/lib/toil/lib/aws -copying src/toil/lib/aws/s3.py -> build/lib/toil/lib/aws -copying src/toil/lib/aws/iam.py -> build/lib/toil/lib/aws -copying src/toil/lib/aws/session.py -> build/lib/toil/lib/aws +copying src/toil/provisioners/aws/awsProvisioner.py -> build/lib/toil/provisioners/aws creating build/lib/toil/batchSystems/mesos -copying src/toil/batchSystems/mesos/executor.py -> build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/batchSystem.py -> build/lib/toil/batchSystems/mesos -copying src/toil/batchSystems/mesos/__init__.py -> build/lib/toil/batchSystems/mesos +copying src/toil/batchSystems/mesos/executor.py -> build/lib/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/conftest.py -> build/lib/toil/batchSystems/mesos +copying src/toil/batchSystems/mesos/__init__.py -> build/lib/toil/batchSystems/mesos creating build/lib/toil/batchSystems/mesos/test copying src/toil/batchSystems/mesos/test/__init__.py -> build/lib/toil/batchSystems/mesos/test running egg_info @@ -1988,6 +2024,51 @@ !! check.warn(importable) +copying src/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/lib/toil/server/api_spec +creating build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_boolean.txt -> build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_float.txt -> build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_int.txt -> build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_lines.txt -> build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_map.txt -> build/lib/toil/test/wdl/testfiles +copying src/toil/test/wdl/testfiles/test_string.txt -> build/lib/toil/test/wdl/testfiles +creating build/lib/toil/test/utils/ABCWorkflowDebug +copying src/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/lib/toil/test/utils/ABCWorkflowDebug +copying src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/lib/toil/test/utils/ABCWorkflowDebug +copying src/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/lib/toil/test/utils/ABCWorkflowDebug +copying src/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/lib/toil/test/utils/ABCWorkflowDebug +copying src/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/lib/toil/test/utils/ABCWorkflowDebug +creating build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/example_alwaysfail.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/example_cachingbenchmark.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_arguments.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_debugging.patch -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_docker.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_dynamic.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_encapsulation.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_helloworld.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_managing.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_managing2.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_promises.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_promises2.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_quickstart.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_requirements.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_services.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_staging.py -> build/lib/toil/test/docs/scripts +copying src/toil/test/docs/scripts/tutorial_stats.py -> build/lib/toil/test/docs/scripts +creating build/lib/toil/test/docs/scripts/stagingExampleFiles +copying src/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles +copying src/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles copying src/toil/test/cwl/alwaysfails.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/colon_test_output.cwl -> build/lib/toil/test/cwl copying src/toil/test/cwl/colon_test_output_job.yaml -> build/lib/toil/test/cwl @@ -2028,394 +2109,349 @@ copying src/toil/test/cwl/directory/directory/file.txt -> build/lib/toil/test/cwl/directory/directory creating build/lib/toil/test/cwl/mock_mpi copying src/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/lib/toil/test/cwl/mock_mpi -creating build/lib/toil/test/utils/ABCWorkflowDebug -copying src/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/lib/toil/test/utils/ABCWorkflowDebug -copying src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/lib/toil/test/utils/ABCWorkflowDebug -copying src/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/lib/toil/test/utils/ABCWorkflowDebug -copying src/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/lib/toil/test/utils/ABCWorkflowDebug -copying src/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/lib/toil/test/utils/ABCWorkflowDebug -creating build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_boolean.txt -> build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_float.txt -> build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_int.txt -> build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_lines.txt -> build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_map.txt -> build/lib/toil/test/wdl/testfiles -copying src/toil/test/wdl/testfiles/test_string.txt -> build/lib/toil/test/wdl/testfiles -creating build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/example_alwaysfail.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/example_cachingbenchmark.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_arguments.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_debugging.patch -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_docker.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_dynamic.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_encapsulation.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_helloworld.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_managing.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_managing2.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_promises.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_promises2.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_quickstart.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_requirements.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_services.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_staging.py -> build/lib/toil/test/docs/scripts -copying src/toil/test/docs/scripts/tutorial_stats.py -> build/lib/toil/test/docs/scripts -creating build/lib/toil/test/docs/scripts/stagingExampleFiles -copying src/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles -copying src/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles -copying src/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/lib/toil/server/api_spec installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/toil -creating build/bdist.linux-x86_64/wheel/toil/cwl -copying build/lib/toil/cwl/utils.py -> build/bdist.linux-x86_64/wheel/./toil/cwl -copying build/lib/toil/cwl/cwltoil.py -> build/bdist.linux-x86_64/wheel/./toil/cwl -copying build/lib/toil/cwl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/cwl -copying build/lib/toil/cwl/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/cwl -copying build/lib/toil/bus.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/common.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/serviceManager.py -> build/bdist.linux-x86_64/wheel/./toil +creating build/bdist.linux-x86_64/wheel/toil/fileStores +copying build/lib/toil/fileStores/nonCachingFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores +copying build/lib/toil/fileStores/abstractFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores +copying build/lib/toil/fileStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores +copying build/lib/toil/fileStores/cachingFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores +creating build/bdist.linux-x86_64/wheel/toil/server +creating build/bdist.linux-x86_64/wheel/toil/server/api_spec +copying build/lib/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/bdist.linux-x86_64/wheel/./toil/server/api_spec +copying build/lib/toil/server/api_spec/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/api_spec +copying build/lib/toil/server/wsgi_app.py -> build/bdist.linux-x86_64/wheel/./toil/server +copying build/lib/toil/server/utils.py -> build/bdist.linux-x86_64/wheel/./toil/server +copying build/lib/toil/server/app.py -> build/bdist.linux-x86_64/wheel/./toil/server +creating build/bdist.linux-x86_64/wheel/toil/server/cli +copying build/lib/toil/server/cli/wes_cwl_runner.py -> build/bdist.linux-x86_64/wheel/./toil/server/cli +copying build/lib/toil/server/cli/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/cli +copying build/lib/toil/server/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server +copying build/lib/toil/server/celery_app.py -> build/bdist.linux-x86_64/wheel/./toil/server +creating build/bdist.linux-x86_64/wheel/toil/server/wes +copying build/lib/toil/server/wes/amazon_wes_utils.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes +copying build/lib/toil/server/wes/tasks.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes +copying build/lib/toil/server/wes/abstract_backend.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes +copying build/lib/toil/server/wes/toil_backend.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes +copying build/lib/toil/server/wes/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes +creating build/bdist.linux-x86_64/wheel/toil/lib +copying build/lib/toil/lib/throttle.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/ftp_utils.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/memoize.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/exceptions.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/iterables.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/generatedEC2Lists.py -> build/bdist.linux-x86_64/wheel/./toil/lib +creating build/bdist.linux-x86_64/wheel/toil/lib/encryption +copying build/lib/toil/lib/encryption/_dummy.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption +copying build/lib/toil/lib/encryption/_nacl.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption +copying build/lib/toil/lib/encryption/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption +copying build/lib/toil/lib/encryption/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption +copying build/lib/toil/lib/retry.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/misc.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/compatibility.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/threading.py -> build/bdist.linux-x86_64/wheel/./toil/lib +creating build/bdist.linux-x86_64/wheel/toil/lib/aws +copying build/lib/toil/lib/aws/s3.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/aws/ami.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/aws/session.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/aws/utils.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/aws/iam.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws +copying build/lib/toil/lib/humanize.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/docker.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/accelerators.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/conversions.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/io.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/resources.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/bioio.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/integration.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/ec2.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/expando.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/objects.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/lib/ec2nodes.py -> build/bdist.linux-x86_64/wheel/./toil/lib +copying build/lib/toil/statsAndLogging.py -> build/bdist.linux-x86_64/wheel/./toil creating build/bdist.linux-x86_64/wheel/toil/jobStores +copying build/lib/toil/jobStores/googleJobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores copying build/lib/toil/jobStores/abstractJobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores -copying build/lib/toil/jobStores/utils.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores -copying build/lib/toil/jobStores/fileJobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores -copying build/lib/toil/jobStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores creating build/bdist.linux-x86_64/wheel/toil/jobStores/aws -copying build/lib/toil/jobStores/aws/utils.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores/aws copying build/lib/toil/jobStores/aws/jobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores/aws +copying build/lib/toil/jobStores/aws/utils.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores/aws copying build/lib/toil/jobStores/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores/aws +copying build/lib/toil/jobStores/utils.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores +copying build/lib/toil/jobStores/fileJobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores copying build/lib/toil/jobStores/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores -copying build/lib/toil/jobStores/googleJobStore.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores -copying build/lib/toil/resource.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/statsAndLogging.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/jobStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/jobStores +copying build/lib/toil/exceptions.py -> build/bdist.linux-x86_64/wheel/./toil creating build/bdist.linux-x86_64/wheel/toil/test -creating build/bdist.linux-x86_64/wheel/toil/test/cwl -copying build/lib/toil/test/cwl/colon_test_output.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/seqtk_seq.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/echo.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/revsort.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/cwlTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/sorttool.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/echo-stderr.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/s3_secondary_file.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -creating build/bdist.linux-x86_64/wheel/toil/test/cwl/directory -creating build/bdist.linux-x86_64/wheel/toil/test/cwl/directory/directory -copying build/lib/toil/test/cwl/directory/directory/file.txt -> build/bdist.linux-x86_64/wheel/./toil/test/cwl/directory/directory -copying build/lib/toil/test/cwl/preemptible.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/conditional_wf.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/measure_default_memory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/echo_string.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/glob_dir.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/conditional_wf.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/download.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/preemptible_expression.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/directory_from_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/revsort2.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/colon_test_output_job.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/test_filename_conflict_detection.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/echo-stdout-log-dir.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/nvidia_smi.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -creating build/bdist.linux-x86_64/wheel/toil/test/cwl/mock_mpi -copying build/lib/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl/mock_mpi -copying build/lib/toil/test/cwl/file_from_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/mpi_simple.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/stream.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/whale.txt -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/load_contents.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/alwaysfails.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/download_subdirectory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/download_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/not_run_required_input.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/revtool2.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/revtool.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -copying build/lib/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl -creating build/bdist.linux-x86_64/wheel/toil/test/src -copying build/lib/toil/test/src/dockerCheckTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/toilContextManagerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/promisesTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/fileStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/userDefinedJobArgTypeTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/threadingTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/resourceTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/promisedRequirementTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/helloWorldTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/busTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/environmentTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/workerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/jobFileStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/jobEncapsulationTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/resumabilityTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/jobTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/jobDescriptionTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/miscTests.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/importExportFileTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/autoDeploymentTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/restartDAGTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/systemTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/retainTempDirTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/jobServiceTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/checkpointTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/deferredFunctionTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/realtimeLoggerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -copying build/lib/toil/test/src/regularLogTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src -creating build/bdist.linux-x86_64/wheel/toil/test/jobStores -copying build/lib/toil/test/jobStores/jobStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/jobStores -copying build/lib/toil/test/jobStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/jobStores -creating build/bdist.linux-x86_64/wheel/toil/test/cactus -copying build/lib/toil/test/cactus/test_cactus_integration.py -> build/bdist.linux-x86_64/wheel/./toil/test/cactus -copying build/lib/toil/test/cactus/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/cactus -creating build/bdist.linux-x86_64/wheel/toil/test/utils -copying build/lib/toil/test/utils/toilKillTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils -creating build/bdist.linux-x86_64/wheel/toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug -copying build/lib/toil/test/utils/utilsTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils -copying build/lib/toil/test/utils/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils -copying build/lib/toil/test/utils/toilDebugTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils creating build/bdist.linux-x86_64/wheel/toil/test/server copying build/lib/toil/test/server/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/server copying build/lib/toil/test/server/serverTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/server -creating build/bdist.linux-x86_64/wheel/toil/test/provisioners -copying build/lib/toil/test/provisioners/clusterTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners -copying build/lib/toil/test/provisioners/clusterScalerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners -copying build/lib/toil/test/provisioners/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners -creating build/bdist.linux-x86_64/wheel/toil/test/provisioners/aws -copying build/lib/toil/test/provisioners/aws/awsProvisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners/aws -copying build/lib/toil/test/provisioners/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners/aws -copying build/lib/toil/test/provisioners/gceProvisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners -copying build/lib/toil/test/provisioners/provisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners -copying build/lib/toil/test/provisioners/restartScript.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners creating build/bdist.linux-x86_64/wheel/toil/test/lib -copying build/lib/toil/test/lib/test_conversions.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib +copying build/lib/toil/test/lib/test_misc.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib copying build/lib/toil/test/lib/dockerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib copying build/lib/toil/test/lib/test_ec2.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib -copying build/lib/toil/test/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib creating build/bdist.linux-x86_64/wheel/toil/test/lib/aws +copying build/lib/toil/test/lib/aws/test_utils.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/test_s3.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/test_iam.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib/aws -copying build/lib/toil/test/lib/aws/test_utils.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib/aws copying build/lib/toil/test/lib/test_integration.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib -copying build/lib/toil/test/lib/test_misc.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib -copying build/lib/toil/test/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test -creating build/bdist.linux-x86_64/wheel/toil/test/batchSystems -copying build/lib/toil/test/batchSystems/test_lsf_helper.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems -copying build/lib/toil/test/batchSystems/batch_system_plugin_test.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems -copying build/lib/toil/test/batchSystems/test_gridengine.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems -copying build/lib/toil/test/batchSystems/batchSystemTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems -copying build/lib/toil/test/batchSystems/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems -copying build/lib/toil/test/batchSystems/test_slurm.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib +copying build/lib/toil/test/lib/test_conversions.py -> build/bdist.linux-x86_64/wheel/./toil/test/lib +creating build/bdist.linux-x86_64/wheel/toil/test/jobStores +copying build/lib/toil/test/jobStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/jobStores +copying build/lib/toil/test/jobStores/jobStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/jobStores +creating build/bdist.linux-x86_64/wheel/toil/test/cactus +copying build/lib/toil/test/cactus/test_cactus_integration.py -> build/bdist.linux-x86_64/wheel/./toil/test/cactus +copying build/lib/toil/test/cactus/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/cactus +creating build/bdist.linux-x86_64/wheel/toil/test/src +copying build/lib/toil/test/src/resourceTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/environmentTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/userDefinedJobArgTypeTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/busTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/jobServiceTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/helloWorldTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/jobTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/jobFileStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/jobDescriptionTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/jobEncapsulationTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/promisedRequirementTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/miscTests.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/realtimeLoggerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/checkpointTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/toilContextManagerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/dockerCheckTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/regularLogTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/promisesTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/restartDAGTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/importExportFileTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/retainTempDirTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/fileStoreTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/resumabilityTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/systemTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/workerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/autoDeploymentTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/threadingTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src +copying build/lib/toil/test/src/deferredFunctionTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/src creating build/bdist.linux-x86_64/wheel/toil/test/wdl creating build/bdist.linux-x86_64/wheel/toil/test/wdl/testfiles -copying build/lib/toil/test/wdl/testfiles/test_string.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles +copying build/lib/toil/test/wdl/testfiles/test_int.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_boolean.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles +copying build/lib/toil/test/wdl/testfiles/test_string.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_lines.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_float.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles -copying build/lib/toil/test/wdl/testfiles/test_int.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/testfiles/test_map.txt -> build/bdist.linux-x86_64/wheel/./toil/test/wdl/testfiles copying build/lib/toil/test/wdl/wdltoil_test.py -> build/bdist.linux-x86_64/wheel/./toil/test/wdl -copying build/lib/toil/test/wdl/wdltoil_test_kubernetes.py -> build/bdist.linux-x86_64/wheel/./toil/test/wdl copying build/lib/toil/test/wdl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/wdl -creating build/bdist.linux-x86_64/wheel/toil/test/sort -copying build/lib/toil/test/sort/restart_sort.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort -copying build/lib/toil/test/sort/sort.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort -copying build/lib/toil/test/sort/sortTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort -copying build/lib/toil/test/sort/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort +copying build/lib/toil/test/wdl/wdltoil_test_kubernetes.py -> build/bdist.linux-x86_64/wheel/./toil/test/wdl creating build/bdist.linux-x86_64/wheel/toil/test/mesos +copying build/lib/toil/test/mesos/stress.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos +copying build/lib/toil/test/mesos/helloWorld.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos copying build/lib/toil/test/mesos/MesosDataStructuresTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos copying build/lib/toil/test/mesos/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos -copying build/lib/toil/test/mesos/helloWorld.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos -copying build/lib/toil/test/mesos/stress.py -> build/bdist.linux-x86_64/wheel/./toil/test/mesos -creating build/bdist.linux-x86_64/wheel/toil/test/options -copying build/lib/toil/test/options/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/options -copying build/lib/toil/test/options/options.py -> build/bdist.linux-x86_64/wheel/./toil/test/options +creating build/bdist.linux-x86_64/wheel/toil/test/utils +copying build/lib/toil/test/utils/utilsTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils +creating build/bdist.linux-x86_64/wheel/toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/utils/ABCWorkflowDebug +copying build/lib/toil/test/utils/toilDebugTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils +copying build/lib/toil/test/utils/toilKillTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils +copying build/lib/toil/test/utils/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/utils +creating build/bdist.linux-x86_64/wheel/toil/test/provisioners +copying build/lib/toil/test/provisioners/provisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners +copying build/lib/toil/test/provisioners/restartScript.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners +creating build/bdist.linux-x86_64/wheel/toil/test/provisioners/aws +copying build/lib/toil/test/provisioners/aws/awsProvisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners/aws +copying build/lib/toil/test/provisioners/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners/aws +copying build/lib/toil/test/provisioners/clusterTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners +copying build/lib/toil/test/provisioners/clusterScalerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners +copying build/lib/toil/test/provisioners/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners +copying build/lib/toil/test/provisioners/gceProvisionerTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/provisioners creating build/bdist.linux-x86_64/wheel/toil/test/docs -copying build/lib/toil/test/docs/scriptsTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs creating build/bdist.linux-x86_64/wheel/toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_managing.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_arguments.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -creating build/bdist.linux-x86_64/wheel/toil/test/docs/scripts/stagingExampleFiles -copying build/lib/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts/stagingExampleFiles -copying build/lib/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts/stagingExampleFiles -copying build/lib/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_dynamic.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_requirements.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_promises2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_stats.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/example_alwaysfail.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/example_cachingbenchmark.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_staging.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_managing2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_services.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_promises.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_requirements.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_quickstart.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/example_cachingbenchmark.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_helloworld.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/example_alwaysfail.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_debugging.patch -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_services.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_encapsulation.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +creating build/bdist.linux-x86_64/wheel/toil/test/docs/scripts/stagingExampleFiles +copying build/lib/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts/stagingExampleFiles +copying build/lib/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts/stagingExampleFiles copying build/lib/toil/test/docs/scripts/tutorial_docker.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_stats.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts +copying build/lib/toil/test/docs/scripts/tutorial_dynamic.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_staging.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_encapsulation.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_managing.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_helloworld.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_promises.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts -copying build/lib/toil/test/docs/scripts/tutorial_quickstart.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs/scripts copying build/lib/toil/test/docs/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs -copying build/lib/toil/worker.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/realtimeLogger.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/test/docs/scriptsTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/docs +creating build/bdist.linux-x86_64/wheel/toil/test/options +copying build/lib/toil/test/options/options.py -> build/bdist.linux-x86_64/wheel/./toil/test/options +copying build/lib/toil/test/options/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/options +copying build/lib/toil/test/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test +creating build/bdist.linux-x86_64/wheel/toil/test/sort +copying build/lib/toil/test/sort/restart_sort.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort +copying build/lib/toil/test/sort/sort.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort +copying build/lib/toil/test/sort/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort +copying build/lib/toil/test/sort/sortTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/sort +creating build/bdist.linux-x86_64/wheel/toil/test/cwl +copying build/lib/toil/test/cwl/echo-stdout-log-dir.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/nvidia_smi.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/colon_test_output.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/download_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/mpi_simple.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/glob_dir.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/seqtk_seq.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +creating build/bdist.linux-x86_64/wheel/toil/test/cwl/mock_mpi +copying build/lib/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl/mock_mpi +copying build/lib/toil/test/cwl/download_subdirectory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/conditional_wf.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/sorttool.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/cwlTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/echo.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +creating build/bdist.linux-x86_64/wheel/toil/test/cwl/directory +creating build/bdist.linux-x86_64/wheel/toil/test/cwl/directory/directory +copying build/lib/toil/test/cwl/directory/directory/file.txt -> build/bdist.linux-x86_64/wheel/./toil/test/cwl/directory/directory +copying build/lib/toil/test/cwl/revtool.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/load_contents.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/colon_test_output_job.yaml -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/not_run_required_input.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/stream.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/directory_from_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/echo_string.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/s3_secondary_file.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/file_from_directory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/whale.txt -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/revtool2.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/test_filename_conflict_detection.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/download.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/alwaysfails.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/conditional_wf.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/preemptible_expression.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/echo-stderr.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/revsort.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/preemptible.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/revsort2.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/measure_default_memory.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +copying build/lib/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/bdist.linux-x86_64/wheel/./toil/test/cwl +creating build/bdist.linux-x86_64/wheel/toil/test/batchSystems +copying build/lib/toil/test/batchSystems/test_slurm.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/batchSystems/test_lsf_helper.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/batchSystems/test_gridengine.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/batchSystems/batchSystemTest.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/batchSystems/batch_system_plugin_test.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +copying build/lib/toil/test/batchSystems/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/test/batchSystems +creating build/bdist.linux-x86_64/wheel/toil/wdl +copying build/lib/toil/wdl/wdltoil.py -> build/bdist.linux-x86_64/wheel/./toil/wdl +copying build/lib/toil/wdl/utils.py -> build/bdist.linux-x86_64/wheel/./toil/wdl +copying build/lib/toil/wdl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/wdl creating build/bdist.linux-x86_64/wheel/toil/utils -copying build/lib/toil/utils/toilSshCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilStatus.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilDebugJob.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilDestroyCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilStats.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilDebugFile.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilLaunchCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilUpdateEC2Instances.py -> build/bdist.linux-x86_64/wheel/./toil/utils copying build/lib/toil/utils/toilClean.py -> build/bdist.linux-x86_64/wheel/./toil/utils copying build/lib/toil/utils/toilMain.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilRsyncCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilUpdateEC2Instances.py -> build/bdist.linux-x86_64/wheel/./toil/utils -copying build/lib/toil/utils/toilConfig.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilDebugFile.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilDestroyCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilLaunchCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils copying build/lib/toil/utils/toilKill.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilDebugJob.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilRsyncCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilStatus.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilStats.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/utils copying build/lib/toil/utils/toilServer.py -> build/bdist.linux-x86_64/wheel/./toil/utils -creating build/bdist.linux-x86_64/wheel/toil/server -copying build/lib/toil/server/utils.py -> build/bdist.linux-x86_64/wheel/./toil/server -creating build/bdist.linux-x86_64/wheel/toil/server/cli -copying build/lib/toil/server/cli/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/cli -copying build/lib/toil/server/cli/wes_cwl_runner.py -> build/bdist.linux-x86_64/wheel/./toil/server/cli -copying build/lib/toil/server/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server -copying build/lib/toil/server/celery_app.py -> build/bdist.linux-x86_64/wheel/./toil/server -copying build/lib/toil/server/wsgi_app.py -> build/bdist.linux-x86_64/wheel/./toil/server -creating build/bdist.linux-x86_64/wheel/toil/server/wes -copying build/lib/toil/server/wes/tasks.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes -copying build/lib/toil/server/wes/amazon_wes_utils.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes -copying build/lib/toil/server/wes/toil_backend.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes -copying build/lib/toil/server/wes/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes -copying build/lib/toil/server/wes/abstract_backend.py -> build/bdist.linux-x86_64/wheel/./toil/server/wes -creating build/bdist.linux-x86_64/wheel/toil/server/api_spec -copying build/lib/toil/server/api_spec/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/server/api_spec -copying build/lib/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/bdist.linux-x86_64/wheel/./toil/server/api_spec -copying build/lib/toil/server/app.py -> build/bdist.linux-x86_64/wheel/./toil/server +copying build/lib/toil/utils/toilSshCluster.py -> build/bdist.linux-x86_64/wheel/./toil/utils +copying build/lib/toil/utils/toilConfig.py -> build/bdist.linux-x86_64/wheel/./toil/utils creating build/bdist.linux-x86_64/wheel/toil/provisioners -copying build/lib/toil/provisioners/abstractProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners -copying build/lib/toil/provisioners/clusterScaler.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners -copying build/lib/toil/provisioners/gceProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners -copying build/lib/toil/provisioners/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners creating build/bdist.linux-x86_64/wheel/toil/provisioners/aws -copying build/lib/toil/provisioners/aws/awsProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners/aws copying build/lib/toil/provisioners/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners/aws +copying build/lib/toil/provisioners/aws/awsProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners/aws +copying build/lib/toil/provisioners/clusterScaler.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners copying build/lib/toil/provisioners/node.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners -creating build/bdist.linux-x86_64/wheel/toil/fileStores -copying build/lib/toil/fileStores/cachingFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores -copying build/lib/toil/fileStores/abstractFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores -copying build/lib/toil/fileStores/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores -copying build/lib/toil/fileStores/nonCachingFileStore.py -> build/bdist.linux-x86_64/wheel/./toil/fileStores -creating build/bdist.linux-x86_64/wheel/toil/lib -copying build/lib/toil/lib/misc.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/docker.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/ec2.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/integration.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/objects.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/memoize.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/retry.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/threading.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/humanize.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/iterables.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/throttle.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/ftp_utils.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/accelerators.py -> build/bdist.linux-x86_64/wheel/./toil/lib -creating build/bdist.linux-x86_64/wheel/toil/lib/encryption -copying build/lib/toil/lib/encryption/_dummy.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption -copying build/lib/toil/lib/encryption/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption -copying build/lib/toil/lib/encryption/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption -copying build/lib/toil/lib/encryption/_nacl.py -> build/bdist.linux-x86_64/wheel/./toil/lib/encryption -copying build/lib/toil/lib/compatibility.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib -creating build/bdist.linux-x86_64/wheel/toil/lib/aws -copying build/lib/toil/lib/aws/utils.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/aws/ami.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/aws/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/aws/s3.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/aws/iam.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/aws/session.py -> build/bdist.linux-x86_64/wheel/./toil/lib/aws -copying build/lib/toil/lib/exceptions.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/generatedEC2Lists.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/io.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/expando.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/ec2nodes.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/resources.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/conversions.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/lib/bioio.py -> build/bdist.linux-x86_64/wheel/./toil/lib -copying build/lib/toil/deferred.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/provisioners/abstractProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners +copying build/lib/toil/provisioners/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners +copying build/lib/toil/provisioners/gceProvisioner.py -> build/bdist.linux-x86_64/wheel/./toil/provisioners +copying build/lib/toil/realtimeLogger.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/version.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/bus.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/leader.py -> build/bdist.linux-x86_64/wheel/./toil copying build/lib/toil/toilState.py -> build/bdist.linux-x86_64/wheel/./toil +creating build/bdist.linux-x86_64/wheel/toil/options +copying build/lib/toil/options/wdl.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/options/common.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/options/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/options/runner.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/options/cwl.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/job.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/common.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/resource.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/worker.py -> build/bdist.linux-x86_64/wheel/./toil +copying build/lib/toil/serviceManager.py -> build/bdist.linux-x86_64/wheel/./toil copying build/lib/toil/__init__.py -> build/bdist.linux-x86_64/wheel/./toil +creating build/bdist.linux-x86_64/wheel/toil/cwl +copying build/lib/toil/cwl/utils.py -> build/bdist.linux-x86_64/wheel/./toil/cwl +copying build/lib/toil/cwl/cwltoil.py -> build/bdist.linux-x86_64/wheel/./toil/cwl +copying build/lib/toil/cwl/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/cwl +copying build/lib/toil/cwl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/cwl creating build/bdist.linux-x86_64/wheel/toil/batchSystems -copying build/lib/toil/batchSystems/singleMachine.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/kubernetes.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/contained_executor.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/local_support.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/lsf.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/abstractBatchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/torque.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/slurm.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/awsBatch.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/gridengine.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/registry.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/cleanup_support.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/options.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/batchSystems/lsfHelper.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems creating build/bdist.linux-x86_64/wheel/toil/batchSystems/mesos -copying build/lib/toil/batchSystems/mesos/executor.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos +copying build/lib/toil/batchSystems/mesos/batchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos creating build/bdist.linux-x86_64/wheel/toil/batchSystems/mesos/test copying build/lib/toil/batchSystems/mesos/test/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos/test -copying build/lib/toil/batchSystems/mesos/batchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos -copying build/lib/toil/batchSystems/mesos/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos +copying build/lib/toil/batchSystems/mesos/executor.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos copying build/lib/toil/batchSystems/mesos/conftest.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos +copying build/lib/toil/batchSystems/mesos/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems/mesos +copying build/lib/toil/batchSystems/contained_executor.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/singleMachine.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/kubernetes.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/slurm.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/lsfHelper.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems copying build/lib/toil/batchSystems/htcondor.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems -copying build/lib/toil/leader.py -> build/bdist.linux-x86_64/wheel/./toil -creating build/bdist.linux-x86_64/wheel/toil/wdl -copying build/lib/toil/wdl/utils.py -> build/bdist.linux-x86_64/wheel/./toil/wdl -copying build/lib/toil/wdl/wdltoil.py -> build/bdist.linux-x86_64/wheel/./toil/wdl -copying build/lib/toil/wdl/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/wdl -copying build/lib/toil/exceptions.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/job.py -> build/bdist.linux-x86_64/wheel/./toil -copying build/lib/toil/version.py -> build/bdist.linux-x86_64/wheel/./toil -creating build/bdist.linux-x86_64/wheel/toil/options -copying build/lib/toil/options/common.py -> build/bdist.linux-x86_64/wheel/./toil/options -copying build/lib/toil/options/cwl.py -> build/bdist.linux-x86_64/wheel/./toil/options -copying build/lib/toil/options/runner.py -> build/bdist.linux-x86_64/wheel/./toil/options -copying build/lib/toil/options/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/options -copying build/lib/toil/options/wdl.py -> build/bdist.linux-x86_64/wheel/./toil/options +copying build/lib/toil/batchSystems/options.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/cleanup_support.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/torque.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/registry.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/local_support.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/__init__.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/abstractBatchSystem.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/gridengine.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/batchSystems/lsf.py -> build/bdist.linux-x86_64/wheel/./toil/batchSystems +copying build/lib/toil/deferred.py -> build/bdist.linux-x86_64/wheel/./toil running install_egg_info Copying src/toil.egg-info to build/bdist.linux-x86_64/wheel/./toil-8.0.0.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/toil-8.0.0.dist-info/WHEEL -creating '/build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/.tmp-6faoown5/toil-8.0.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it +creating '/build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/.tmp-sw5xuxz0/toil-8.0.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'toil/__init__.py' adding 'toil/bus.py' adding 'toil/common.py' @@ -2724,467 +2760,467 @@ making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. 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[ 64%] toil.jobStores.fileJobStore [AutoAPI] Rendering Data... [ 65%] toil.jobStores.aws.jobStore -[AutoAPI] Rendering Data... [ 65%] toil.test.src.fileStoreTest +[AutoAPI] Rendering Data... [ 65%] toil.test.server.serverTest +[AutoAPI] Rendering Data... [ 66%] toil.test.src.fileStoreTest [AutoAPI] Rendering Data... [ 66%] toil.test.src.threadingTest -[AutoAPI] Rendering Data... [ 66%] toil.test.server.serverTest [AutoAPI] Rendering Data... [ 67%] toil.test.sort.restart_sort [AutoAPI] Rendering Data... [ 67%] toil.utils.toilRsyncCluster [AutoAPI] Rendering Data... [ 67%] toil.batchSystems.lsfHelper -[AutoAPI] Rendering Data... [ 68%] toil.test.src.helloWorldTest -[AutoAPI] Rendering Data... [ 68%] toil.test.src.restartDAGTest +[AutoAPI] Rendering Data... [ 68%] toil.server.wes.toil_backend +[AutoAPI] Rendering Data... [ 68%] toil.lib.encryption.conftest +[AutoAPI] Rendering Data... [ 69%] toil.test.lib.aws.test_utils [AutoAPI] Rendering Data... [ 69%] toil.test.src.jobServiceTest -[AutoAPI] Rendering Data... [ 69%] toil.test.src.checkpointTest -[AutoAPI] Rendering Data... [ 70%] toil.test.src.regularLogTest -[AutoAPI] Rendering Data... [ 70%] toil.test.utils.toilKillTest -[AutoAPI] Rendering Data... [ 71%] toil.test.lib.aws.test_utils -[AutoAPI] Rendering Data... [ 71%] toil.utils.toilLaunchCluster -[AutoAPI] Rendering Data... [ 72%] toil.server.wes.toil_backend -[AutoAPI] Rendering Data... [ 72%] toil.lib.encryption.conftest +[AutoAPI] Rendering Data... [ 70%] toil.test.src.helloWorldTest +[AutoAPI] Rendering Data... [ 70%] toil.test.src.checkpointTest +[AutoAPI] Rendering Data... [ 71%] toil.test.src.regularLogTest +[AutoAPI] Rendering Data... [ 71%] toil.test.src.restartDAGTest +[AutoAPI] Rendering Data... [ 72%] toil.test.utils.toilKillTest +[AutoAPI] Rendering Data... [ 72%] toil.utils.toilLaunchCluster [AutoAPI] Rendering Data... [ 73%] toil.batchSystems.kubernetes [AutoAPI] Rendering Data... [ 73%] toil.batchSystems.gridengine [AutoAPI] Rendering Data... [ 74%] toil.batchSystems.mesos.test [AutoAPI] Rendering Data... [ 74%] toil.jobStores.googleJobStore -[AutoAPI] Rendering Data... [ 75%] toil.test.src.dockerCheckTest [AutoAPI] Rendering Data... [ 75%] toil.test.src.environmentTest +[AutoAPI] Rendering Data... [ 75%] toil.test.src.dockerCheckTest [AutoAPI] Rendering Data... [ 76%] toil.test.utils.toilDebugTest [AutoAPI] Rendering Data... [ 76%] toil.utils.toilDestroyCluster -[AutoAPI] Rendering Data... [ 77%] toil.test.src.jobFileStoreTest -[AutoAPI] Rendering Data... [ 77%] toil.test.src.resumabilityTest +[AutoAPI] Rendering Data... [ 77%] toil.server.cli.wes_cwl_runner +[AutoAPI] Rendering Data... [ 77%] toil.test.lib.test_integration [AutoAPI] Rendering Data... [ 78%] toil.test.lib.test_conversions -[AutoAPI] Rendering Data... [ 78%] toil.test.lib.test_integration -[AutoAPI] Rendering Data... [ 78%] toil.server.cli.wes_cwl_runner +[AutoAPI] Rendering Data... [ 78%] toil.test.src.jobFileStoreTest +[AutoAPI] Rendering Data... [ 78%] toil.test.src.resumabilityTest [AutoAPI] Rendering Data... [ 79%] toil.jobStores.abstractJobStore [AutoAPI] Rendering Data... [ 79%] toil.test.src.retainTempDirTest [AutoAPI] Rendering Data... [ 80%] toil.provisioners.clusterScaler [AutoAPI] Rendering Data... [ 80%] toil.batchSystems.singleMachine [AutoAPI] Rendering Data... [ 81%] toil.batchSystems.local_support -[AutoAPI] Rendering Data... [ 81%] toil.test.src.jobDescriptionTest -[AutoAPI] Rendering Data... [ 82%] toil.test.src.autoDeploymentTest -[AutoAPI] Rendering Data... [ 82%] toil.test.src.realtimeLoggerTest +[AutoAPI] Rendering Data... [ 81%] toil.fileStores.cachingFileStore +[AutoAPI] Rendering Data... [ 82%] toil.server.wes.amazon_wes_utils +[AutoAPI] Rendering Data... [ 82%] toil.server.wes.abstract_backend [AutoAPI] Rendering Data... [ 83%] toil.test.jobStores.jobStoreTest -[AutoAPI] Rendering Data... [ 83%] toil.server.wes.amazon_wes_utils -[AutoAPI] Rendering Data... [ 84%] toil.server.wes.abstract_backend -[AutoAPI] Rendering Data... [ 84%] toil.provisioners.gceProvisioner -[AutoAPI] Rendering Data... [ 85%] toil.fileStores.cachingFileStore +[AutoAPI] Rendering Data... [ 83%] toil.test.src.jobDescriptionTest +[AutoAPI] Rendering Data... [ 84%] toil.test.src.realtimeLoggerTest +[AutoAPI] Rendering Data... [ 84%] toil.test.src.autoDeploymentTest +[AutoAPI] Rendering Data... [ 85%] toil.provisioners.gceProvisioner [AutoAPI] Rendering Data... [ 85%] toil.batchSystems.mesos.executor [AutoAPI] Rendering Data... [ 86%] toil.batchSystems.mesos.conftest -[AutoAPI] Rendering Data... [ 86%] toil.test.batchSystems.test_slurm +[AutoAPI] Rendering Data... [ 86%] toil.fileStores.abstractFileStore +[AutoAPI] Rendering Data... [ 87%] toil.test.batchSystems.test_slurm [AutoAPI] Rendering Data... [ 87%] toil.utils.toilUpdateEC2Instances -[AutoAPI] Rendering Data... 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[ 89%] toil.test.src.importExportFileTest @@ -4685,655 +4721,655 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/toil-8.0.0' TOIL_SKIP_ONLINE=true TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True dh_auto_test -I: pybuild base:311: cd /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build; python3.13 -m pytest -n 16 --dist loadscope -vv -W ignore -k "not (testVirtualEnv or DockstoreLookupTest or testMultiplejobs or testServices)" -m "not slow" --ignore toil/test/lib/aws/test_s3.py --ignore toil/test/provisioners/aws/awsProvisionerTest.py --ignore toil/test/wdl/wdltoil_test.py --ignore toil/test/cwl/cwlTest.py --ignore toil/test/lib/test_ec2.py --ignore toil/test/batchSystems/batchSystemTest.py --ignore toil/test/lib/aws/test_iam.py --ignore toil/test/provisioners/clusterTest.py --ignore toil/test/wdl/wdltoil_test_kubernetes.py --ignore toil/test/cactus/test_cactus_integration.py toil/test +I: pybuild base:311: cd /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build; python3.13 -m pytest -n 12 --dist loadscope -vv -W ignore -k "not (testVirtualEnv or DockstoreLookupTest or testMultiplejobs or testServices)" -m "not slow" --ignore toil/test/lib/aws/test_s3.py --ignore toil/test/provisioners/aws/awsProvisionerTest.py --ignore toil/test/wdl/wdltoil_test.py --ignore toil/test/cwl/cwlTest.py --ignore toil/test/lib/test_ec2.py --ignore toil/test/batchSystems/batchSystemTest.py --ignore toil/test/lib/aws/test_iam.py --ignore toil/test/provisioners/clusterTest.py --ignore toil/test/wdl/wdltoil_test_kubernetes.py --ignore toil/test/cactus/test_cactus_integration.py toil/test ============================= test session starts ============================== platform linux -- Python 3.13.5, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 cachedir: .pytest_cache rootdir: /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build configfile: setup.cfg plugins: xdist-3.6.1, typeguard-4.4.2 -created: 16/16 workers -16 workers [360 items] +created: 12/12 workers +12 workers [360 items] scheduling tests via LoadScopeScheduling toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate -toil/test/lib/dockerTest.py::DockerTest::testDockerClean -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate -toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia -toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser -toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_and_cancel_workflows -[gw1] [ 0%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality -[gw1] [ 0%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate -[gw2] [ 0%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality -[gw2] [ 1%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality -[gw2] [ 1%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality -toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode -[gw12] [ 1%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode -toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime -[gw5] [ 1%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean -toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO -[gw5] [ 2%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO -toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM -[gw5] [ 2%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM -toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP -[gw5] [ 2%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP -toil/test/lib/dockerTest.py::DockerTest::testDockerLogs +[gw11] [ 0%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_and_cancel_workflows +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url +[gw11] [ 0%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows +[gw10] [ 0%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_many_all_exist +toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia +toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser +[gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo +[gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo +[gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag +[gw7] [ 1%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag +[gw7] [ 2%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo +[gw7] [ 2%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo +toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag +[gw7] [ 2%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag +toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo +[gw7] [ 3%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo +toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo +[gw7] [ 3%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo +toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo +[gw7] [ 3%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_and_cancel_workflows [gw9] [ 3%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_and_cancel_workflows toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_https_url -[gw9] [ 3%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_https_url +[gw9] [ 4%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_https_url toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_inputs_zip -[gw9] [ 3%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_inputs_zip +[gw9] [ 4%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_inputs_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_and_inputs_zip -[gw9] [ 3%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_and_inputs_zip +[gw9] [ 4%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_and_inputs_zip toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_zip -toil/test/src/miscTests.py::MiscTests::testIDStability -[gw14] [ 4%] PASSED toil/test/src/miscTests.py::MiscTests::testIDStability -toil/test/src/miscTests.py::MiscTests::test_atomic_context_error -[gw14] [ 4%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_error -toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok -[gw14] [ 4%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok -toil/test/src/miscTests.py::MiscTests::test_atomic_install -[gw14] [ 5%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install -toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev -[gw14] [ 5%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev -[gw8] [ 5%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testApplianceParser -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo -[gw8] [ 5%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadGoogleRepo -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo -toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus -[gw11] [ 6%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_and_cancel_workflows -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url -[gw11] [ 6%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_https_url -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip -toil/test/src/miscTests.py::MiscTests::test_call_command_err -[gw5] [ 6%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs -toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux -[gw5] [ 6%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux -[gw8] [ 7%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepo +[gw9] [ 5%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_zip +toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip +[gw9] [ 5%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip +toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip +[gw9] [ 5%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip +toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url +[gw9] [ 5%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url +toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +[gw9] [ 6%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate +[gw2] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality +[gw2] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality +[gw2] [ 6%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionIdempotence [gw2] [ 7%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionIdempotence toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testEmptyFileStoreIDIsReadable [gw2] [ 7%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testEmptyFileStoreIDIsReadable toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob -[gw2] [ 8%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob +[gw2] [ 7%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportFtpFile [gw2] [ 8%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportHttpFile [gw2] [ 8%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportHttpFile -toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream -[gw5] [ 8%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream -toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream -[gw5] [ 9%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream -toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain -[gw5] [ 9%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain -toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection -[gw5] [ 9%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection -toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain -[gw5] [ 10%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain -[gw9] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_manifest_zip -toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip -[gw9] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_multi_file_zip -toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip -[gw9] [ 10%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_no_params_zip -toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag -[gw8] [ 11%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayRepoNTag -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag -[gw8] [ 11%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBadQuayTag -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo -[gw8] [ 11%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepo -[gw2] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState +[gw2] [ 8%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows -[gw10] [ 12%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_and_cancel_workflows -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url -[gw10] [ 12%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip -[gw10] [ 12%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip -[gw10] [ 13%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip -[gw10] [ 13%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip -[gw10] [ 13%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip -[gw10] [ 13%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url -[gw14] [ 14%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_err +[gw2] [ 8%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions +[gw2] [ 9%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality +[gw2] [ 9%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream +[gw2] [ 9%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles +toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate +[gw1] [ 10%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality +[gw1] [ 10%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality -[gw1] [ 14%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality +[gw1] [ 10%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence -[gw1] [ 14%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence +[gw1] [ 10%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable -[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable +[gw1] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob -[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob +[gw1] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportFtpFile -[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportFtpFile +[gw1] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile -[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile +[gw1] [ 11%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState -[gw1] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState +[gw1] [ 12%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation -[gw1] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation +[gw1] [ 12%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions -[gw1] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions +[gw1] [ 12%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality -[gw1] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality +[gw1] [ 13%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultiThreadImportFile -[gw1] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultiThreadImportFile -toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag -[gw8] [ 17%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testBroadDockerRepoBadTag -toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo -[gw9] [ 17%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url -toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways -[gw9] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -[gw11] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip -[gw11] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip -[gw11] [ 18%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip -[gw10] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -[gw10] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -[gw2] [ 19%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions -[gw2] [ 20%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality -[gw2] [ 20%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream -[gw2] [ 20%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles -[gw2] [ 20%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete -[gw2] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode -[gw2] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode +[gw1] [ 13%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultiThreadImportFile toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob -[gw1] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob +[gw1] [ 13%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream -[gw1] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream +[gw1] [ 13%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles -[gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles +[gw1] [ 14%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete -[gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete +[gw1] [ 14%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteFileStreamTextMode -[gw1] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteFileStreamTextMode -[gw2] [ 23%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles +[gw1] [ 14%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteFileStreamTextMode toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteSharedFilesTextMode -[gw8] [ 23%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testGoogleRepo -toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo -[gw8] [ 23%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testNonexistentRepo -toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo -[gw8] [ 23%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testOfficialUbuntuRepo -[gw2] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging -[gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteSharedFilesTextMode +[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testReadWriteSharedFilesTextMode toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation -[gw1] [ 24%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation +[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles -[gw1] [ 25%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles +[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging -[gw1] [ 25%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging -toil/test/src/miscTests.py::MiscTests::test_call_command_ok -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip -[gw11] [ 25%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip -[gw11] [ 25%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url -[gw11] [ 26%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -[gw11] [ 26%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails -[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging +[gw1] [ 15%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior +[gw1] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior +[gw2] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete +[gw2] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode +[gw2] [ 16%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteFileStreamTextMode +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode +[gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testReadWriteSharedFilesTextMode +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles +[gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging +[gw2] [ 17%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior -[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior +[gw2] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles -[gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles +[gw1] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles +[gw1] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +[gw1] [ 18%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +[gw1] [ 19%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py +[gw10] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_https_url +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip +[gw10] [ 19%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_inputs_zip +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip +[gw10] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_and_inputs_zip +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip +[gw10] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_manifest_zip +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip +[gw10] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_multi_file_zip +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip +[gw10] [ 20%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_no_params_zip +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url +[gw10] [ 21%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +[gw10] [ 21%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +[gw2] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles -[gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles +[gw2] [ 21%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -[gw2] [ 27%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +[gw2] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py -[gw2] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +[gw2] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -[gw2] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior -[gw1] [ 28%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles -toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection -[gw5] [ 28%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility +[gw2] [ 22%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py -[gw14] [ 29%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_ok -toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag -[gw14] [ 29%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag -toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags -[gw14] [ 29%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags -toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags -[gw14] [ 30%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags -toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji -[gw14] [ 30%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji -[gw2] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py +toil/test/lib/dockerTest.py::DockerTest::testDockerClean +[gw5] [ 23%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean +toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO +[gw5] [ 23%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO +toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM +[gw5] [ 23%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_RM +toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP +[gw5] [ 23%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_STOP +toil/test/lib/dockerTest.py::DockerTest::testDockerLogs +[gw5] [ 24%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs +toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux +[gw5] [ 24%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux +toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream +[gw5] [ 24%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Demux_Stream +toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream +[gw5] [ 25%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerLogs_Stream +toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain +[gw5] [ 25%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChain +toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection +[gw5] [ 25%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testDockerPipeChainErrorDetection +toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain +[gw5] [ 25%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChain +[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py -[gw1] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles -[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py -[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py -[gw2] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py +[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -[gw1] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py +[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +[gw2] [ 26%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip +[gw11] [ 27%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_inputs_zip +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip +[gw11] [ 27%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_and_inputs_zip +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip +[gw11] [ 27%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_manifest_zip +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip +[gw11] [ 28%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_multi_file_zip +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip +[gw11] [ 28%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_no_params_zip +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url +[gw11] [ 28%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +[gw11] [ 28%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_relative_url_no_attachments_fails +[gw1] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py -[gw1] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py +[gw1] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py -[gw1] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py +[gw1] [ 29%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -[gw1] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py +[gw1] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -[gw1] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py +[gw1] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py -[gw1] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +[gw1] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -[gw1] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py +[gw1] [ 30%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py -[gw1] [ 34%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py +[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py -[gw1] [ 34%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py +[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -[gw1] [ 34%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip -[gw9] [ 35%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip -toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip -[gw10] [ 35%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility -[gw10] [ 35%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility -[gw2] [ 35%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -[gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- toil/test/__init__.py -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py -[gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py +[gw1] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py +[gw2] [ 31%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -[gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode -[gw10] [ 36%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken -[gw10] [ 37%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility +[gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py -[gw2] [ 37%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py -[gw10] [ 37%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility +[gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py -[gw2] [ 38%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py +[gw2] [ 32%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- toil/test/__init__.py toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py +[gw2] [ 33%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate +toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip +[gw9] [ 33%] SKIPPED toil/test/server/serverTest.py::ToilWESServerWorkflowTest::test_run_workflow_single_file_zip +toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus +toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo +[gw7] [ 33%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo +toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode +[gw7] [ 33%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testAddingInitialNode +toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime +toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip +[gw10] [ 34%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryWorkflowTest::test_run_workflow_single_file_zip +toil/test/src/miscTests.py::MiscTests::testIDStability +[gw10] [ 34%] PASSED toil/test/src/miscTests.py::MiscTests::testIDStability +toil/test/src/miscTests.py::MiscTests::test_atomic_context_error +[gw10] [ 34%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_error +toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok +[gw10] [ 35%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_context_ok +toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip +[gw11] [ 35%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip +toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag +[gw11] [ 35%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag +toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags +[gw11] [ 35%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_build_tag_with_tags +toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags +[gw11] [ 36%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_empty_aws_tags +toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji +[gw11] [ 36%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_emoji +toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection +[gw5] [ 36%] SKIPPED toil/test/lib/dockerTest.py::DockerTest::testNonCachingDockerChainErrorDetection +toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways +toil/test/src/miscTests.py::MiscTests::test_atomic_install +toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py +[gw2] [ 36%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility -[gw9] [ 38%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility +[gw2] [ 37%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testReadWriteFileStreamTextMode -[gw9] [ 38%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testReadWriteFileStreamTextMode +[gw2] [ 37%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken -[gw9] [ 38%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken +[gw2] [ 37%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility -[gw9] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility -[gw2] [ 39%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- toil/test/__init__.py -toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo -[gw8] [ 39%] SKIPPED toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo -toil/test/src/resourceTest.py::ResourceTest::testBuiltIn -toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip -[gw11] [ 40%] SKIPPED toil/test/server/serverTest.py::ToilWESServerCeleryS3StateWorkflowTest::test_run_workflow_single_file_zip -toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths +[gw2] [ 38%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility +toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py +[gw1] [ 38%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility +[gw10] [ 38%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install +toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev +[gw10] [ 38%] PASSED toil/test/src/miscTests.py::MiscTests::test_atomic_install_dev toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_object -[gw14] [ 40%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_object +toil/test/src/miscTests.py::MiscTests::test_call_command_err +[gw11] [ 39%] PASSED toil/test/lib/aws/test_utils.py::TagGenerationTest::test_incorrect_json_object +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility +[gw11] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testImportReadFileCompatibility +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode +[gw11] [ 39%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testReadWriteFileStreamTextMode +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken +[gw11] [ 40%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testToilIsNotBroken +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility +[gw11] [ 40%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteExportFileCompatibility +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions +[gw2] [ 40%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions +toil/test/src/resourceTest.py::ResourceTest::testBuiltIn +[gw8] [ 40%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia +[gw10] [ 41%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_err +toil/test/src/miscTests.py::MiscTests::test_call_command_ok +[gw3] [ 41%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_many_all_exist +toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions +[gw11] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions toil/test/src/miscTests.py::TestPanic::test_nested_panic -[gw14] [ 40%] PASSED toil/test/src/miscTests.py::TestPanic::test_nested_panic +[gw11] [ 41%] PASSED toil/test/src/miscTests.py::TestPanic::test_nested_panic toil/test/src/miscTests.py::TestPanic::test_panic -[gw14] [ 40%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic +[gw11] [ 42%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic toil/test/src/miscTests.py::TestPanic::test_panic_by_hand -[gw14] [ 41%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_by_hand -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions -[gw9] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions -toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions -[gw10] [ 41%] SKIPPED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithGoogleJobStore::testWriteReadGlobalFilePermissions -toil/test/lib/test_conversions.py::ConversionTest::test_convert -toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py -[gw2] [ 41%] SKIPPED toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py -toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info -[gw2] [ 42%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info -toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health -toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py -[gw1] [ 42%] SKIPPED toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- toil/test/__init__.py -toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist -toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary -[gw10] [ 42%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_convert -toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds -[gw14] [ 43%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary -[gw10] [ 43%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds -toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore -[gw2] [ 43%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health -toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes -[gw10] [ 43%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes -toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects -toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home -[gw2] [ 44%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home -toil/test/src/jobTest.py::JobTest::testDAGConsistency -[gw3] [ 44%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_many_all_exist -[gw9] [ 44%] PASSED toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging -toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file -[gw12] [ 45%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime -toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes -[gw12] [ 45%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes -toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists -toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs -[gw7] [ 45%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testBetaInertia -[gw9] [ 45%] PASSED toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file -toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMaxNodes -[gw3] [ 46%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists +[gw10] [ 42%] PASSED toil/test/src/miscTests.py::MiscTests::test_call_command_ok +toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths +[gw11] [ 42%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_by_hand +toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary +[gw11] [ 43%] PASSED toil/test/src/miscTests.py::TestPanic::test_panic_with_secondary +toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist +[gw3] [ 43%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_not_exists -[gw3] [ 46%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_not_exists +[gw3] [ 43%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_one_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_exists -[gw1] [ 46%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist -toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists -[gw3] [ 46%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_exists -[gw7] [ 47%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMaxNodes +[gw3] [ 43%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_not_exists -[gw1] [ 47%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists +[gw8] [ 44%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMaxNodes toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMinNodes -toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running -[gw0] [ 47%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality -[gw1] [ 48%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running -toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain -[gw3] [ 48%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_not_exists -[gw7] [ 48%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMinNodes +[gw8] [ 44%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testMinNodes toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testNoLaunchingIfDeltaAlreadyMet +[gw3] [ 44%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_sacct_raises_job_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_some_exists -[gw0] [ 48%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality -[gw3] [ 49%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_some_exists -[gw7] [ 49%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testNoLaunchingIfDeltaAlreadyMet +[gw8] [ 45%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testNoLaunchingIfDeltaAlreadyMet toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitIsSet +[gw3] [ 45%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_coalesce_job_exit_codes_some_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_all_exist -[gw0] [ 49%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence -[gw3] [ 50%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_all_exist +[gw3] [ 45%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_all_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_none_exist -[gw7] [ 50%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitIsSet -[gw0] [ 50%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable +[gw0] [ 45%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality +[gw7] [ 46%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testHighTargetTime +toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes +[gw7] [ 46%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testJobTooLargeForAllNodes +toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs +[gw8] [ 46%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitIsSet toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitResponse -[gw3] [ 50%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_none_exist -toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist -[gw0] [ 51%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob -[gw7] [ 51%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitResponse -[gw3] [ 51%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist +[gw8] [ 46%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testPreemptibleDeficitResponse toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testRounding +[gw3] [ 47%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_none_exist +toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist +[gw3] [ 47%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_many_some_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_exists -[gw3] [ 51%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_exists -toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists -[gw8] [ 52%] PASSED toil/test/src/resourceTest.py::ResourceTest::testBuiltIn -[gw7] [ 52%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testRounding -toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large +[gw0] [ 47%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality +[gw3] [ 48%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_exists +[gw2] [ 48%] PASSED toil/test/src/resourceTest.py::ResourceTest::testBuiltIn toil/test/src/resourceTest.py::ResourceTest::testNonPyStandAlone -[gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists +toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists +[gw11] [ 48%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_many_all_exist +toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists +[gw0] [ 48%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence +[gw3] [ 49%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromSacct_one_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_all_exist -[gw0] [ 53%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob -toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportFtpFile -[gw7] [ 53%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large -[gw3] [ 53%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_all_exist +[gw8] [ 49%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::testRounding +toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large +[gw11] [ 49%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_exists +[gw0] [ 50%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence +toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable +[gw8] [ 50%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_large toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_observed +[gw8] [ 50%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_observed +[gw11] [ 50%] PASSED toil/test/batchSystems/test_gridengine.py::GridEngineTest::test_coalesce_job_exit_codes_one_still_running +toil/test/lib/test_conversions.py::ConversionTest::test_convert +[gw11] [ 51%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_convert +toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds +[gw11] [ 51%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_hms_duration_to_seconds +[gw0] [ 51%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob +toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes +toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small +[gw11] [ 51%] PASSED toil/test/lib/test_conversions.py::ConversionTest::test_human2bytes +toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging +[gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_all_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_none_exist -[gw3] [ 53%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_none_exist +[gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_none_exist toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_some_exist -[gw12] [ 54%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs -toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime -[gw7] [ 54%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_observed -[gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_some_exist +[gw3] [ 52%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_many_some_exist +[gw8] [ 53%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small +toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info +[gw8] [ 53%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_get_service_info +toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health +[gw8] [ 53%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_health toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_exists -toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small -[gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_exists +toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home +[gw8] [ 53%] SKIPPED toil/test/server/serverTest.py::ToilWESServerBenchTest::test_home +toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore +[gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_not_exists -[gw7] [ 55%] PASSED toil/test/provisioners/clusterScalerTest.py::ClusterScalerTest::test_overhead_accounting_small -toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info -[gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_not_exists +[gw3] [ 54%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobDetailsFromScontrol_one_not_exists +[gw0] [ 54%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob +toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportFtpFile toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_exists [gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_not_exists -[gw3] [ 56%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_not_exists +[gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_job_not_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_exists -[gw3] [ 56%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_exists +[gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_exists toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_not_exists -[gw3] [ 56%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_not_exists -toil/test/__init__.py::toil.test.make_tests -[gw3] [ 56%] PASSED toil/test/__init__.py::toil.test.make_tests -toil/test/__init__.py::toil.test.timeLimit -[gw12] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime +[gw3] [ 55%] PASSED toil/test/batchSystems/test_slurm.py::SlurmTest::test_getJobExitCode_sacct_raises_job_not_exists +toil/test/src/jobTest.py::JobTest::testDAGConsistency +[gw11] [ 56%] PASSED toil/test/src/busTest.py::MessageBusTest::test_cross_thread_messaging +toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file +[gw11] [ 56%] PASSED toil/test/src/busTest.py::MessageBusTest::test_enum_ints_in_file +toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path +[gw7] [ 56%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLongRunningJobs +toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime +[gw7] [ 56%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testLowTargetTime toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPackingOneShape -[gw12] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPackingOneShape +[gw7] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPackingOneShape toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPathologicalCase -[gw12] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPathologicalCase +[gw7] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testPathologicalCase toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testSorting -[gw12] [ 58%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testSorting +[gw7] [ 57%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testSorting toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testZeroResourceJobs -[gw12] [ 58%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testZeroResourceJobs -toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store -[gw12] [ 58%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store -toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths -[gw12] [ 58%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths -toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export -[gw12] [ 59%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export -toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false -[gw1] [ 59%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain -toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction -[gw8] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testNonPyStandAlone +[gw7] [ 58%] PASSED toil/test/provisioners/clusterScalerTest.py::BinPackingTest::testZeroResourceJobs +toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects +[gw7] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects +toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore +[gw7] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore +toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py +[gw7] [ 58%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py +toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain +[gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testNonPyStandAlone toil/test/src/resourceTest.py::ResourceTest::testPackage -[gw8] [ 60%] PASSED toil/test/src/resourceTest.py::ResourceTest::testPackage +[gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testPackage toil/test/src/resourceTest.py::ResourceTest::testStandAlone -[gw8] [ 60%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAlone +[gw2] [ 59%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAlone toil/test/src/resourceTest.py::ResourceTest::testStandAloneInPackage +[gw2] [ 60%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAloneInPackage +toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info [gw0] [ 60%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportFtpFile toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile -[gw8] [ 60%] PASSED toil/test/src/resourceTest.py::ResourceTest::testStandAloneInPackage -toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog -[gw0] [ 61%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile +[gw7] [ 60%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain +toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction +[gw0] [ 60%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testInitialState -[gw3] [ 61%] PASSED toil/test/__init__.py::toil.test.timeLimit -toil/test/options/options.py::OptionsTest::test_caching_option_priority -[gw3] [ 61%] PASSED toil/test/options/options.py::OptionsTest::test_caching_option_priority -toil/test/options/options.py::OptionsTest::test_default_caching_slurm -[gw3] [ 61%] PASSED toil/test/options/options.py::OptionsTest::test_default_caching_slurm +[gw5] [ 61%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways +toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever +[gw4] [ 61%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments +toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker +[gw4] [ 61%] SKIPPED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker +toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic +[gw8] [ 61%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore +toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore +[gw6] [ 62%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile +toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility +[gw10] [ 62%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths +toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod +[gw5] [ 62%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever +toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError +[gw7] [ 63%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction +toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain +[gw2] [ 63%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info +toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory +[gw2] [ 63%] SKIPPED toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory +toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job +[gw9] [ 63%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus +toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF +[gw9] [ 64%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF +toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF +[gw7] [ 64%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain +toil/test/__init__.py::toil.test.make_tests +[gw7] [ 64%] PASSED toil/test/__init__.py::toil.test.make_tests +toil/test/__init__.py::toil.test.timeLimit +[gw3] [ 65%] PASSED toil/test/src/jobTest.py::JobTest::testDAGConsistency +toil/test/src/jobTest.py::JobTest::testDeadlockDetection +[gw10] [ 65%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod +toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda +[gw3] [ 65%] PASSED toil/test/src/jobTest.py::JobTest::testDeadlockDetection +toil/test/src/jobTest.py::JobTest::testStatic2 +[gw7] [ 65%] PASSED toil/test/__init__.py::toil.test.timeLimit +toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export +[gw7] [ 66%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_basic_import_export +toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false +[gw11] [ 66%] PASSED toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path +toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects +[gw10] [ 66%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda +toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod +[gw5] [ 66%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError +toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError +[gw7] [ 67%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false +toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog +[gw3] [ 67%] PASSED toil/test/src/jobTest.py::JobTest::testStatic2 +toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription +[gw3] [ 67%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription +toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing +[gw3] [ 68%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing toil/test/batchSystems/batch_system_plugin_test.py::BatchSystemPluginTest::test_batchsystem_plugin_installable -[gw3] [ 62%] PASSED toil/test/batchSystems/batch_system_plugin_test.py::BatchSystemPluginTest::test_batchsystem_plugin_installable +[gw8] [ 68%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore +toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore +[gw3] [ 68%] PASSED toil/test/batchSystems/batch_system_plugin_test.py::BatchSystemPluginTest::test_batchsystem_plugin_installable toil/test/batchSystems/test_lsf_helper.py::LSFHelperTest::test_parse_mem_and_cmd_from_output -[gw3] [ 62%] PASSED toil/test/batchSystems/test_lsf_helper.py::LSFHelperTest::test_parse_mem_and_cmd_from_output +[gw3] [ 68%] PASSED toil/test/batchSystems/test_lsf_helper.py::LSFHelperTest::test_parse_mem_and_cmd_from_output toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName -[gw3] [ 62%] SKIPPED toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName +[gw3] [ 69%] SKIPPED toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName toil/test/lib/test_misc.py::UserNameAvailableTest::test_get_user_name -[gw3] [ 63%] PASSED toil/test/lib/test_misc.py::UserNameAvailableTest::test_get_user_name +[gw3] [ 69%] PASSED toil/test/lib/test_misc.py::UserNameAvailableTest::test_get_user_name toil/test/lib/test_misc.py::UserNameUnvailableTest::test_get_user_name -[gw3] [ 63%] PASSED toil/test/lib/test_misc.py::UserNameUnvailableTest::test_get_user_name +[gw3] [ 69%] PASSED toil/test/lib/test_misc.py::UserNameUnvailableTest::test_get_user_name toil/test/lib/test_misc.py::UserNameVeryBrokenTest::test_get_user_name -[gw3] [ 63%] PASSED toil/test/lib/test_misc.py::UserNameVeryBrokenTest::test_get_user_name +[gw3] [ 70%] PASSED toil/test/lib/test_misc.py::UserNameVeryBrokenTest::test_get_user_name toil/test/mesos/MesosDataStructuresTest.py::DataStructuresTest::testJobQueue -[gw3] [ 63%] PASSED toil/test/mesos/MesosDataStructuresTest.py::DataStructuresTest::testJobQueue +[gw3] [ 70%] PASSED toil/test/mesos/MesosDataStructuresTest.py::DataStructuresTest::testJobQueue toil/test/provisioners/provisionerTest.py::ProvisionerTest::test_node_type_parsing -[gw3] [ 64%] PASSED toil/test/provisioners/provisionerTest.py::ProvisionerTest::test_node_type_parsing +[gw3] [ 70%] PASSED toil/test/provisioners/provisionerTest.py::ProvisionerTest::test_node_type_parsing toil/test/server/serverTest.py::ToilServerUtilsTest::test_workflow_canceling_recovery -[gw3] [ 64%] SKIPPED toil/test/server/serverTest.py::ToilServerUtilsTest::test_workflow_canceling_recovery +[gw3] [ 70%] SKIPPED toil/test/server/serverTest.py::ToilServerUtilsTest::test_workflow_canceling_recovery toil/test/server/serverTest.py::FileStateStoreTest::test_state_store -[gw3] [ 64%] SKIPPED toil/test/server/serverTest.py::FileStateStoreTest::test_state_store +[gw3] [ 71%] SKIPPED toil/test/server/serverTest.py::FileStateStoreTest::test_state_store toil/test/server/serverTest.py::FileStateStoreURLTest::test_state_store -[gw3] [ 65%] SKIPPED toil/test/server/serverTest.py::FileStateStoreURLTest::test_state_store +[gw3] [ 71%] SKIPPED toil/test/server/serverTest.py::FileStateStoreURLTest::test_state_store toil/test/src/checkpointTest.py::CheckpointTest::testCheckpointNotRetried -[gw15] [ 65%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways -toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever -[gw12] [ 65%] PASSED toil/test/src/importExportFileTest.py::ImportExportFileTest::test_import_export_restart_false -toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription -[gw12] [ 65%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescription -toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing -[gw12] [ 66%] PASSED toil/test/src/jobDescriptionTest.py::JobDescriptionTest::testJobDescriptionSequencing +[gw2] [ 71%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job +toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store +[gw2] [ 71%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store +toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths +[gw2] [ 72%] SKIPPED toil/test/server/serverTest.py::AWSStateStoreTest::test_state_store_paths toil/test/src/jobServiceTest.py::JobServiceTest::testServiceWithCheckpoints -[gw12] [ 66%] SKIPPED toil/test/src/jobServiceTest.py::JobServiceTest::testServiceWithCheckpoints +[gw2] [ 72%] SKIPPED toil/test/src/jobServiceTest.py::JobServiceTest::testServiceWithCheckpoints toil/test/src/jobServiceTest.py::PerfectServiceTest::testServiceWithCheckpoints -[gw12] [ 66%] SKIPPED toil/test/src/jobServiceTest.py::PerfectServiceTest::testServiceWithCheckpoints +[gw2] [ 72%] SKIPPED toil/test/src/jobServiceTest.py::PerfectServiceTest::testServiceWithCheckpoints toil/test/src/promisesTest.py::CachedUnpicklingJobStoreTest::test -[gw14] [ 66%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testCachingFileStore -toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore -[gw4] [ 67%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments -toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker -[gw4] [ 67%] SKIPPED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker -toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic -[gw6] [ 67%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testDeleteLocalFile -toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility -[gw11] [ 68%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testBatchSystemCleanupCanHandleWorkerDeaths -toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod -[gw7] [ 68%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_print_job_info -toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory -[gw7] [ 68%] SKIPPED toil/test/utils/toilDebugTest.py::DebugJobTest::test_retrieve_task_directory -toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job -[gw8] [ 68%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog -toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs -[gw13] [ 69%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus -toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF -[gw13] [ 69%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF -toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF -[gw11] [ 69%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithClassMethod -toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda -[gw15] [ 70%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever -toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError -[gw1] [ 70%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction -toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain -[gw1] [ 70%] PASSED toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain +[gw10] [ 73%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testAddChildEncapsulate -[gw1] [ 70%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testAddChildEncapsulate +[gw10] [ 73%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testAddChildEncapsulate toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testEncapsulation -[gw8] [ 71%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs -toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering -[gw12] [ 71%] PASSED toil/test/src/promisesTest.py::CachedUnpicklingJobStoreTest::test -toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test -[gw11] [ 71%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithLambda -toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod -[gw9] [ 71%] PASSED toil/test/src/busTest.py::MessageBusTest::test_restart_without_bus_path -toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects -[gw9] [ 72%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithJobStoreFileObjects -toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore -[gw9] [ 72%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testPromisesWithNonCachingFileStore -toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py -[gw9] [ 72%] SKIPPED toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py -[gw7] [ 73%] PASSED toil/test/utils/toilDebugTest.py::DebugJobTest::test_run_job -toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining -[gw2] [ 73%] PASSED toil/test/src/jobTest.py::JobTest::testDAGConsistency -toil/test/src/jobTest.py::JobTest::testDeadlockDetection -[gw11] [ 73%] PASSED toil/test/src/deferredFunctionTest.py::DeferredFunctionTest::testDeferredFunctionRunsWithMethod -toil/test/src/workerTest.py::WorkerTests::testNextChainable -[gw11] [ 73%] PASSED toil/test/src/workerTest.py::WorkerTests::testNextChainable -[gw3] [ 74%] PASSED toil/test/src/checkpointTest.py::CheckpointTest::testCheckpointNotRetried -toil/test/src/environmentTest.py::EnvironmentTest::test_environment -[gw14] [ 74%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testJobFileStore -toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore -[gw2] [ 74%] PASSED toil/test/src/jobTest.py::JobTest::testDeadlockDetection -toil/test/src/jobTest.py::JobTest::testStatic2 -[gw12] [ 75%] PASSED toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test -toil/test/src/promisesTest.py::PathIndexingPromiseTest::test -[gw15] [ 75%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError -toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError -[gw13] [ 75%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF +[gw9] [ 73%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF -[gw13] [ 75%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF +[gw9] [ 73%] SKIPPED toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog -[gw10] [ 76%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects -toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore -[gw14] [ 76%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore -toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger -[gw12] [ 76%] PASSED toil/test/src/promisesTest.py::PathIndexingPromiseTest::test -[gw2] [ 76%] PASSED toil/test/src/jobTest.py::JobTest::testStatic2 -[gw1] [ 77%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testEncapsulation -toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles -[gw15] [ 77%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError +[gw5] [ 74%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError -[gw8] [ 77%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering -toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding -[gw14] [ 78%] PASSED toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger -[gw8] [ 78%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding -toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill -[gw8] [ 78%] SKIPPED toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill -[gw7] [ 78%] PASSED toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining -toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames -[gw15] [ 79%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError +[gw8] [ 74%] PASSED toil/test/src/jobFileStoreTest.py::JobFileStoreTest::testNonCachingFileStore +toil/test/options/options.py::OptionsTest::test_caching_option_priority +[gw8] [ 74%] PASSED toil/test/options/options.py::OptionsTest::test_caching_option_priority +toil/test/options/options.py::OptionsTest::test_default_caching_slurm +[gw8] [ 75%] PASSED toil/test/options/options.py::OptionsTest::test_default_caching_slurm +toil/test/src/workerTest.py::WorkerTests::testNextChainable +[gw8] [ 75%] PASSED toil/test/src/workerTest.py::WorkerTests::testNextChainable +toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles +[gw7] [ 75%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testRegularLog +toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs +[gw2] [ 75%] PASSED toil/test/src/promisesTest.py::CachedUnpicklingJobStoreTest::test +toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test +[gw7] [ 76%] PASSED toil/test/src/regularLogTest.py::RegularLogTest::testWriteLogs +toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering +[gw10] [ 76%] PASSED toil/test/src/jobEncapsulationTest.py::JobEncapsulationTest::testEncapsulation +toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger +[gw11] [ 76%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects +toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore +[gw5] [ 76%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess -[gw13] [ 79%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog +[gw3] [ 77%] PASSED toil/test/src/checkpointTest.py::CheckpointTest::testCheckpointNotRetried +toil/test/src/environmentTest.py::EnvironmentTest::test_environment +[gw9] [ 77%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute -[gw1] [ 79%] PASSED toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles +[gw2] [ 77%] PASSED toil/test/src/promisesTest.py::ChainedIndexedPromisesTest::test +toil/test/src/promisesTest.py::PathIndexingPromiseTest::test +[gw8] [ 78%] PASSED toil/test/utils/toilDebugTest.py::testFetchJobStoreFiles toil/test/utils/toilKillTest.py::ToilKillTest::test_cwl_toil_kill -[gw5] [ 80%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility +[gw5] [ 78%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess +toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames +[gw10] [ 78%] PASSED toil/test/src/realtimeLoggerTest.py::RealtimeLoggerTest::testRealtimeLogger +toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining +[gw1] [ 78%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode -[gw4] [ 80%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic +[gw4] [ 79%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation -[gw10] [ 80%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore -toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py -[gw15] [ 80%] PASSED toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess -[gw5] [ 81%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode +[gw2] [ 79%] PASSED toil/test/src/promisesTest.py::PathIndexingPromiseTest::test +[gw8] [ 79%] PASSED toil/test/utils/toilKillTest.py::ToilKillTest::test_cwl_toil_kill +toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill +[gw8] [ 80%] SKIPPED toil/test/utils/toilKillTest.py::ToilKillTestWithAWSJobStore::test_cwl_toil_kill +[gw1] [ 80%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken -[gw1] [ 81%] PASSED toil/test/utils/toilKillTest.py::ToilKillTest::test_cwl_toil_kill +[gw5] [ 80%] PASSED toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames +[gw7] [ 80%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering +toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding [gw4] [ 81%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 [gw6] [ 81%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCachHitFileFromJobStore -[gw7] [ 82%] PASSED toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames -[gw3] [ 82%] PASSED toil/test/src/environmentTest.py::EnvironmentTest::test_environment -toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld +[gw7] [ 81%] PASSED toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding +[gw11] [ 81%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore +toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py +[gw10] [ 82%] PASSED toil/test/src/resumabilityTest.py::ResumabilityTest::test_chaining [gw6] [ 82%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCachHitFileFromJobStore toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile -[gw10] [ 83%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py +[gw4] [ 82%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 +toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld +[gw1] [ 83%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken +toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility [gw0] [ 83%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testInitialState toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobCreation [gw0] [ 83%] PASSED toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobCreation toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobDeletions -[gw4] [ 83%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 -toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld -[gw6] [ 84%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile +[gw6] [ 83%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile -[gw5] [ 84%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken -toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility -[gw3] [ 84%] PASSED toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld -[gw6] [ 85%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile -toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode -[gw4] [ 85%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld +[gw4] [ 84%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow -[gw6] [ 85%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode -toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testSimultaneousReadsUncachedStream -[gw5] [ 85%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility +[gw3] [ 84%] PASSED toil/test/src/environmentTest.py::EnvironmentTest::test_environment +toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld +[gw6] [ 84%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile +toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode +[gw1] [ 85%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions -[gw4] [ 86%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow +[gw4] [ 85%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 -[gw4] [ 86%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 +[gw11] [ 85%] PASSED toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::test_omp_threads <- toil/test/batchSystems/batchSystemTest.py +[gw4] [ 85%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testJobFunctions -[gw13] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute +[gw6] [ 86%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testReadWriteFileStreamTextMode +toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testSimultaneousReadsUncachedStream +[gw3] [ 86%] PASSED toil/test/src/helloWorldTest.py::HelloWorldTest::testHelloWorld +[gw9] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport -[gw13] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport +[gw9] [ 86%] PASSED toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport toil/test/utils/utilsTest.py::UtilsTest::test_config_functionality +[gw9] [ 87%] PASSED toil/test/utils/utilsTest.py::UtilsTest::test_config_functionality [gw4] [ 87%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testJobFunctions toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging -[gw13] [ 87%] PASSED toil/test/utils/utilsTest.py::UtilsTest::test_config_functionality -[gw5] [ 87%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions -[gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging +[gw4] [ 87%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging2 +[gw1] [ 88%] PASSED toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions [gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging2 toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises [gw4] [ 88%] PASSED toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises @@ -5418,10 +5454,10 @@ toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions [gw6] [100%] PASSED toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions -================= 205 passed, 155 skipped in 345.97s (0:05:45) ================= +================= 205 passed, 155 skipped in 312.97s (0:05:12) ================= I: pybuild pybuild:334: find /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build \( -name fileToSort.txt -o -name sortedFile.txt -o -name 'kind-explode_*' \) -print -delete ; find /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build -name "jobstore-test*" | xargs rm -Rf +/build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/kind-explode_instance-rvi_bi_t_fileset.txt /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/sortedFile.txt -/build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/kind-explode_instance-t1tr7mvh_fileset.txt /build/reproducible-path/toil-8.0.0/.pybuild/cpython3_3.13_toil/build/fileToSort.txt make[1]: Leaving directory '/build/reproducible-path/toil-8.0.0' create-stamp debian/debhelper-build-stamp @@ -5439,12 +5475,12 @@ dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild -I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil-cwl-runner +I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil-wdl-runner I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil-wes-cwl-runner +I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil-cwl-runner +I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/_toil_contained_executor I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/_toil_worker -I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil-wdl-runner -I: dh_python3 tools:114: replacing shebang in debian/toil/usr/bin/toil I: dh_python3 pydist:339: Ignoring complex environment marker: graphlib_backport==1.0; python_version < "3.9" and extra == "wdl" I: dh_python3 pydist:339: Ignoring complex environment marker: htcondor<25,>=23.6.0; sys_platform != "darwin" and extra == "htcondor" I: dh_python3 pydist:339: Ignoring complex environment marker: pymesos<0.4,>=0.3.15; python_version < "3.11" and extra == "mesos" @@ -5470,12 +5506,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1424951/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/287123 and its subdirectories -I: Current time: Sat Aug 22 14:48:55 -12 2026 -I: pbuilder-time-stamp: 1787453335 +I: removing directory /srv/workspace/pbuilder/1424951 and its subdirectories +I: Current time: Mon Jul 21 10:36:07 +14 2025 +I: pbuilder-time-stamp: 1753043767