Diff of the two buildlogs: -- --- b1/build.log 2025-03-02 20:11:13.099694482 +0000 +++ b2/build.log 2025-03-02 20:16:07.342366374 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Mar 2 08:08:00 -12 2025 -I: pbuilder-time-stamp: 1740946080 +I: Current time: Sun Apr 5 16:34:15 +14 2026 +I: pbuilder-time-stamp: 1775356455 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -24,51 +24,83 @@ dpkg-source: info: applying use-archive-xopen.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1032891/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 5 02:34 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='40e05aa8acb140ebae31d755e2587536' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1032891' - PS1='# ' - PS2='> ' + INVOCATION_ID=22f65ef7bc81488f903bc7b1f6a77db7 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2675997 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.F8yuimBB/pbuilderrc_vqTd --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.F8yuimBB/b1 --logfile b1/build.log vcfanno_0.3.5+ds-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.F8yuimBB/pbuilderrc_Wvgo --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.F8yuimBB/b2 --logfile b2/build.log vcfanno_0.3.5+ds-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1032891/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -231,7 +263,7 @@ Get: 99 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.5+20250216-1 [105 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 samtools amd64 1.21-1 [667 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 tabix amd64 1.21+ds-1 [496 kB] -Fetched 126 MB in 1s (101 MB/s) +Fetched 126 MB in 2s (67.8 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19802 files and directories currently installed.) @@ -650,7 +682,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes dpkg-buildpackage: info: source package vcfanno dpkg-buildpackage: info: source version 0.3.5+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -674,222 +710,222 @@ dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang cd obj-x86_64-linux-gnu && go install -trimpath -v -p 12 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared +internal/goexperiment +internal/unsafeheader internal/godebugs -internal/asan +internal/coverage/rtcov +internal/goarch encoding -internal/unsafeheader +internal/asan internal/profilerecord -internal/byteorder -internal/goarch -internal/coverage/rtcov -internal/goexperiment internal/goos -internal/runtime/atomic +internal/byteorder internal/msan +internal/runtime/atomic +internal/cpu +cmp internal/runtime/syscall internal/abi -cmp internal/runtime/math -internal/cpu internal/itoa -internal/runtime/sys -unicode/utf8 math/bits +unicode/utf8 sync/atomic -internal/chacha8rand +internal/runtime/sys unicode unicode/utf16 +internal/chacha8rand log/internal -github.com/dsnet/compress/internal github.com/dsnet/compress/bzip2/internal/sais +github.com/dsnet/compress/internal crypto/internal/fips140/alias crypto/internal/fips140deps/byteorder -crypto/internal/boring/sig internal/runtime/exithook +crypto/internal/boring/sig github.com/klauspost/compress/internal/cpuinfo -crypto/internal/fips140/subtle github.com/ulikunitz/xz/internal/hash +internal/bytealg +math +crypto/internal/fips140deps/cpu +crypto/internal/fips140/subtle container/list vendor/golang.org/x/crypto/cryptobyte/asn1 vendor/golang.org/x/crypto/internal/alias internal/nettrace -crypto/internal/fips140deps/cpu -internal/bytealg -math internal/stringslite internal/race internal/sync internal/runtime/maps github.com/klauspost/compress runtime -internal/reflectlite iter +weak crypto/subtle +internal/reflectlite sync -weak maps slices errors sort -internal/bisect -internal/testlog internal/singleflight unique -math/rand/v2 +internal/bisect +internal/testlog internal/oserror vendor/golang.org/x/net/dns/dnsmessage -io path +io +math/rand/v2 strconv -runtime/cgo syscall internal/godebug -bytes -strings +runtime/cgo hash -hash/crc32 crypto/internal/randutil +strings +bytes container/heap +hash/crc32 hash/crc64 -github.com/brentp/irelate/interfaces +crypto/internal/fips140deps/godebug +bufio reflect -regexp/syntax -math/rand +github.com/brentp/irelate/interfaces github.com/dsnet/compress/internal/errors -crypto -crypto/internal/fips140deps/godebug crypto/internal/impl -bufio net/netip +regexp/syntax +crypto/internal/fips140 +crypto vendor/golang.org/x/text/transform net/http/internal/ascii -crypto/internal/fips140 -github.com/dsnet/compress -crypto/internal/fips140/sha256 crypto/internal/fips140/sha3 +crypto/internal/fips140/sha256 crypto/internal/fips140/sha512 crypto/tls/internal/fips140tls -time -internal/syscall/execenv -internal/syscall/unix -regexp +math/rand +github.com/dsnet/compress crypto/sha3 crypto/internal/fips140/hmac -crypto/internal/fips140hash +internal/syscall/execenv +time +internal/syscall/unix crypto/internal/fips140/check -crypto/internal/fips140/aes -crypto/internal/fips140/nistec/fiat +crypto/internal/fips140hash crypto/internal/fips140/tls12 crypto/internal/fips140/hkdf crypto/internal/fips140/bigmod crypto/internal/fips140/edwards25519/field +crypto/internal/fips140/aes +crypto/internal/fips140/nistec/fiat crypto/internal/fips140/tls13 +regexp crypto/internal/fips140/edwards25519 -io/fs -internal/poll github.com/BurntSushi/toml/internal context +io/fs +internal/poll +crypto/internal/fips140/nistec internal/filepathlite os -crypto/internal/fips140/nistec internal/fmtsort encoding/binary encoding/base64 -github.com/cespare/xxhash github.com/klauspost/compress/internal/snapref +github.com/cespare/xxhash vendor/golang.org/x/crypto/internal/poly1305 encoding/pem -io/ioutil -fmt crypto/internal/sysrand +io/ioutil path/filepath vendor/golang.org/x/sys/cpu +fmt crypto/internal/entropy -crypto/internal/fips140/drbg net -os/exec -crypto/internal/fips140/aes/gcm -crypto/internal/fips140/ecdh +crypto/internal/fips140/drbg crypto/internal/fips140only -crypto/internal/fips140/ecdsa +os/exec crypto/internal/fips140/ed25519 +crypto/internal/fips140/ecdh crypto/internal/fips140/mlkem +crypto/internal/fips140/ecdsa crypto/internal/fips140/rsa -crypto/md5 +crypto/internal/fips140/aes/gcm crypto/rc4 +crypto/md5 +crypto/cipher +vendor/golang.org/x/crypto/chacha20 +crypto/des +crypto/internal/boring +crypto/sha256 +crypto/aes +crypto/sha512 +crypto/hmac +crypto/ecdh +crypto/sha1 +encoding/hex flag compress/flate -encoding/hex +encoding/json net/url encoding/csv -encoding/json log github.com/pkg/errors github.com/yuin/gopher-lua/ast github.com/yuin/gopher-lua/pm github.com/dsnet/compress/internal/prefix -crypto/cipher -math/big -github.com/yuin/gopher-lua/parse -github.com/brentp/vcfgo github.com/klauspost/compress/fse runtime/debug -crypto/internal/boring -compress/gzip +github.com/brentp/vcfgo +github.com/yuin/gopher-lua/parse +math/big github.com/ulikunitz/xz/internal/xlog -github.com/klauspost/compress/flate -crypto/sha256 +vendor/golang.org/x/crypto/chacha20poly1305 +vendor/golang.org/x/text/unicode/bidi github.com/dsnet/compress/bzip2 -crypto/aes github.com/klauspost/compress/huff0 -github.com/biogo/hts/bgzf -github.com/ulikunitz/xz/lzma -crypto/des +compress/gzip +github.com/klauspost/compress/flate github.com/yuin/gopher-lua -crypto/ecdh -crypto/sha512 -crypto/hmac -vendor/golang.org/x/crypto/chacha20 -crypto/sha1 -vendor/golang.org/x/text/unicode/bidi -github.com/biogo/hts/bgzf/index vendor/golang.org/x/text/unicode/norm +github.com/ulikunitz/xz/lzma +github.com/biogo/hts/bgzf vendor/golang.org/x/net/http2/hpack -github.com/biogo/hts/csi -github.com/biogo/hts/internal vendor/golang.org/x/text/secure/bidirule -vendor/golang.org/x/crypto/chacha20poly1305 -github.com/ulikunitz/xz mime +mime/quotedprintable +net/http/internal +os/user +github.com/biogo/hts/bgzf/index +github.com/biogo/hts/internal +github.com/biogo/hts/csi github.com/BurntSushi/toml -github.com/klauspost/pgzip -crypto/rand -crypto/elliptic +github.com/ulikunitz/xz +vendor/golang.org/x/net/idna +github.com/biogo/hts/tabix +github.com/biogo/hts/sam crypto/internal/boring/bbig +crypto/rand encoding/asn1 +crypto/elliptic crypto/dsa -github.com/klauspost/compress/zstd -github.com/biogo/hts/tabix -github.com/biogo/hts/sam crypto/ed25519 -crypto/rsa -vendor/golang.org/x/net/idna -mime/quotedprintable +github.com/klauspost/compress/zstd crypto/internal/hpke -net/http/internal -os/user -vendor/golang.org/x/crypto/cryptobyte +crypto/rsa +github.com/klauspost/pgzip crypto/x509/pkix +vendor/golang.org/x/crypto/cryptobyte github.com/biogo/hts/bam crypto/ecdsa github.com/brentp/irelate/parsers +github.com/brentp/bix github.com/yuin/gluare github.com/brentp/goluaez -github.com/brentp/bix github.com/brentp/irelate github.com/brentp/vcfanno/api -vendor/golang.org/x/net/http/httpproxy net/textproto +vendor/golang.org/x/net/http/httpproxy crypto/x509 vendor/golang.org/x/net/http/httpguts mime/multipart @@ -903,10 +939,10 @@ cd obj-x86_64-linux-gnu && go test -vet=off -v -p 12 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared testing: warning: no tests to run PASS -ok github.com/brentp/vcfanno 0.048s [no tests to run] +ok github.com/brentp/vcfanno 0.017s [no tests to run] === RUN Test OK: 13 passed ---- PASS: Test (0.26s) +--- PASS: Test (0.03s) === RUN TestHandleA --- PASS: TestHandleA (0.00s) === RUN TestHandlAMulti @@ -914,7 +950,7 @@ === RUN TestByAlt --- PASS: TestByAlt (0.00s) PASS -ok github.com/brentp/vcfanno/api 0.296s +ok github.com/brentp/vcfanno/api 0.042s ? github.com/brentp/vcfanno/shared [no test files] create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang @@ -1042,12 +1078,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2675997/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1032891 and its subdirectories -I: Current time: Sun Mar 2 08:11:12 -12 2025 -I: pbuilder-time-stamp: 1740946272 +I: removing directory /srv/workspace/pbuilder/2675997 and its subdirectories +I: Current time: Sun Apr 5 16:39:06 +14 2026 +I: pbuilder-time-stamp: 1775356746