Diff of the two buildlogs: -- --- b1/build.log 2025-01-21 09:21:46.487045329 +0000 +++ b2/build.log 2025-01-21 09:23:22.302741378 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Feb 23 03:43:54 -12 2026 -I: pbuilder-time-stamp: 1771861434 +I: Current time: Tue Jan 21 23:21:50 +14 2025 +I: pbuilder-time-stamp: 1737451310 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/594903/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 21 09:21 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='56a2ffd331e6470f9d1b86f4ab2b9bd5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='594903' - PS1='# ' - PS2='> ' + INVOCATION_ID=095aa4178a244116a39aa215513cdb5b + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3379647 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZbLev1zy/pbuilderrc_BYo4 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZbLev1zy/b1 --logfile b1/build.log libbio-mage-perl_20030502.3-6.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZbLev1zy/pbuilderrc_pQCN --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZbLev1zy/b2 --logfile b2/build.log libbio-mage-perl_20030502.3-6.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-30-cloud-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-30-cloud-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/594903/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -138,7 +170,7 @@ Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.23 [919 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libtie-ixhash-perl all 1.23-4 [11.7 kB] -Fetched 19.9 MB in 0s (218 MB/s) +Fetched 19.9 MB in 0s (96.6 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19970 files and directories currently installed.) @@ -277,7 +309,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libbio-mage-perl-20030502.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-mage-perl_20030502.3-6_source.changes +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbio-mage-perl-20030502.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-mage-perl_20030502.3-6_source.changes dpkg-buildpackage: info: source package libbio-mage-perl dpkg-buildpackage: info: source version 20030502.3-6 dpkg-buildpackage: info: source distribution unstable @@ -301,158 +337,158 @@ dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/libbio-mage-perl-20030502.3' -cp MAGE/BioAssay.pm blib/lib/Bio/MAGE/BioAssay.pm -cp MAGE/Array/ZoneDefect.pm blib/lib/Bio/MAGE/Array/ZoneDefect.pm cp MAGE/Array/Array.pm blib/lib/Bio/MAGE/Array/Array.pm -cp MAGE/Array/ManufactureLIMSBiomaterial.pm blib/lib/Bio/MAGE/Array/ManufactureLIMSBiomaterial.pm -cp MAGE/Base.pm blib/lib/Bio/MAGE/Base.pm -cp MAGE.pm blib/lib/Bio/MAGE.pm -cp MAGE/ArrayDesign/ReporterGroup.pm blib/lib/Bio/MAGE/ArrayDesign/ReporterGroup.pm +cp MAGE/AuditAndSecurity/Person.pm blib/lib/Bio/MAGE/AuditAndSecurity/Person.pm cp MAGE/ArrayDesign/ArrayDesign.pm blib/lib/Bio/MAGE/ArrayDesign/ArrayDesign.pm -cp MAGE/BQS/BibliographicReference.pm blib/lib/Bio/MAGE/BQS/BibliographicReference.pm -cp MAGE/ArrayDesign.pm blib/lib/Bio/MAGE/ArrayDesign.pm -cp MAGE/AuditAndSecurity/Organization.pm blib/lib/Bio/MAGE/AuditAndSecurity/Organization.pm cp MAGE/AuditAndSecurity/SecurityGroup.pm blib/lib/Bio/MAGE/AuditAndSecurity/SecurityGroup.pm -cp MAGE/AuditAndSecurity/Person.pm blib/lib/Bio/MAGE/AuditAndSecurity/Person.pm -cp MAGE/AuditAndSecurity/Contact.pm blib/lib/Bio/MAGE/AuditAndSecurity/Contact.pm -cp MAGE/ArrayDesign/FeatureGroup.pm blib/lib/Bio/MAGE/ArrayDesign/FeatureGroup.pm +cp MAGE/BioAssay.pm blib/lib/Bio/MAGE/BioAssay.pm +cp MAGE/BQS/BibliographicReference.pm blib/lib/Bio/MAGE/BQS/BibliographicReference.pm +cp MAGE/AuditAndSecurity/Audit.pm blib/lib/Bio/MAGE/AuditAndSecurity/Audit.pm cp MAGE/Array/ArrayGroup.pm blib/lib/Bio/MAGE/Array/ArrayGroup.pm -cp MAGE/Association.pm blib/lib/Bio/MAGE/Association.pm -cp MAGE/Array/Fiducial.pm blib/lib/Bio/MAGE/Array/Fiducial.pm -cp MAGE/AuditAndSecurity.pm blib/lib/Bio/MAGE/AuditAndSecurity.pm -cp MAGE/ArrayDesign/ZoneLayout.pm blib/lib/Bio/MAGE/ArrayDesign/ZoneLayout.pm +cp MAGE/AuditAndSecurity/Contact.pm blib/lib/Bio/MAGE/AuditAndSecurity/Contact.pm +cp MAGE/ArrayDesign/ReporterGroup.pm blib/lib/Bio/MAGE/ArrayDesign/ReporterGroup.pm +cp MAGE/Base.pm blib/lib/Bio/MAGE/Base.pm +cp MAGE/ArrayDesign/ZoneGroup.pm blib/lib/Bio/MAGE/ArrayDesign/ZoneGroup.pm cp MAGE/Array/PositionDelta.pm blib/lib/Bio/MAGE/Array/PositionDelta.pm -cp MAGE/Array.pm blib/lib/Bio/MAGE/Array.pm -cp MAGE/AuditAndSecurity/Security.pm blib/lib/Bio/MAGE/AuditAndSecurity/Security.pm +cp MAGE/Array/FeatureDefect.pm blib/lib/Bio/MAGE/Array/FeatureDefect.pm +cp MAGE/AuditAndSecurity.pm blib/lib/Bio/MAGE/AuditAndSecurity.pm cp MAGE/Array/ArrayManufacture.pm blib/lib/Bio/MAGE/Array/ArrayManufacture.pm -cp MAGE/ArrayDesign/PhysicalArrayDesign.pm blib/lib/Bio/MAGE/ArrayDesign/PhysicalArrayDesign.pm -cp MAGE/ArrayDesign/CompositeGroup.pm blib/lib/Bio/MAGE/ArrayDesign/CompositeGroup.pm +cp MAGE/AuditAndSecurity/Security.pm blib/lib/Bio/MAGE/AuditAndSecurity/Security.pm +cp MAGE/Association.pm blib/lib/Bio/MAGE/Association.pm cp MAGE/Array/ManufactureLIMS.pm blib/lib/Bio/MAGE/Array/ManufactureLIMS.pm -cp MAGE/Array/FeatureDefect.pm blib/lib/Bio/MAGE/Array/FeatureDefect.pm +cp MAGE.pm blib/lib/Bio/MAGE.pm cp MAGE/BQS.pm blib/lib/Bio/MAGE/BQS.pm +cp MAGE/ArrayDesign.pm blib/lib/Bio/MAGE/ArrayDesign.pm +cp MAGE/AuditAndSecurity/Organization.pm blib/lib/Bio/MAGE/AuditAndSecurity/Organization.pm +cp MAGE/Array/ArrayManufactureDeviation.pm blib/lib/Bio/MAGE/Array/ArrayManufactureDeviation.pm +cp MAGE/Array/Fiducial.pm blib/lib/Bio/MAGE/Array/Fiducial.pm +cp MAGE/Array/ManufactureLIMSBiomaterial.pm blib/lib/Bio/MAGE/Array/ManufactureLIMSBiomaterial.pm +cp MAGE/Array.pm blib/lib/Bio/MAGE/Array.pm +cp MAGE/Array/ZoneDefect.pm blib/lib/Bio/MAGE/Array/ZoneDefect.pm cp MAGE/ArrayDesign/Zone.pm blib/lib/Bio/MAGE/ArrayDesign/Zone.pm -cp MAGE/AuditAndSecurity/Audit.pm blib/lib/Bio/MAGE/AuditAndSecurity/Audit.pm +cp MAGE/ArrayDesign/ZoneLayout.pm blib/lib/Bio/MAGE/ArrayDesign/ZoneLayout.pm cp MAGE/ArrayDesign/DesignElementGroup.pm blib/lib/Bio/MAGE/ArrayDesign/DesignElementGroup.pm -cp MAGE/ArrayDesign/ZoneGroup.pm blib/lib/Bio/MAGE/ArrayDesign/ZoneGroup.pm -cp MAGE/Array/ArrayManufactureDeviation.pm blib/lib/Bio/MAGE/Array/ArrayManufactureDeviation.pm +cp MAGE/ArrayDesign/FeatureGroup.pm blib/lib/Bio/MAGE/ArrayDesign/FeatureGroup.pm +cp MAGE/ArrayDesign/CompositeGroup.pm blib/lib/Bio/MAGE/ArrayDesign/CompositeGroup.pm +cp MAGE/ArrayDesign/PhysicalArrayDesign.pm blib/lib/Bio/MAGE/ArrayDesign/PhysicalArrayDesign.pm +cp MAGE/BioAssayData/QuantitationTypeDimension.pm blib/lib/Bio/MAGE/BioAssayData/QuantitationTypeDimension.pm +cp MAGE/BioAssayData/CompositeSequenceDimension.pm blib/lib/Bio/MAGE/BioAssayData/CompositeSequenceDimension.pm cp MAGE/BioAssayData/DesignElementMap.pm blib/lib/Bio/MAGE/BioAssayData/DesignElementMap.pm -cp MAGE/BioAssayData/BioDataCube.pm blib/lib/Bio/MAGE/BioAssayData/BioDataCube.pm -cp MAGE/BioAssayData/DesignElementMapping.pm blib/lib/Bio/MAGE/BioAssayData/DesignElementMapping.pm -cp MAGE/BioAssay/BioAssay.pm blib/lib/Bio/MAGE/BioAssay/BioAssay.pm -cp MAGE/BioAssayData/BioAssayDimension.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayDimension.pm -cp MAGE/BioAssayData/BioAssayMap.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayMap.pm -cp MAGE/BioAssayData/FeatureDimension.pm blib/lib/Bio/MAGE/BioAssayData/FeatureDimension.pm +cp MAGE/BioAssay/ImageAcquisition.pm blib/lib/Bio/MAGE/BioAssay/ImageAcquisition.pm cp MAGE/BioAssay/BioAssayCreation.pm blib/lib/Bio/MAGE/BioAssay/BioAssayCreation.pm -cp MAGE/BioAssayData.pm blib/lib/Bio/MAGE/BioAssayData.pm -cp MAGE/BioAssayData/QuantitationTypeDimension.pm blib/lib/Bio/MAGE/BioAssayData/QuantitationTypeDimension.pm -cp MAGE/BioAssay/DerivedBioAssay.pm blib/lib/Bio/MAGE/BioAssay/DerivedBioAssay.pm -cp MAGE/BioAssayData/BioDataValues.pm blib/lib/Bio/MAGE/BioAssayData/BioDataValues.pm -cp MAGE/BioAssay/Image.pm blib/lib/Bio/MAGE/BioAssay/Image.pm -cp MAGE/BioAssay/Channel.pm blib/lib/Bio/MAGE/BioAssay/Channel.pm -cp MAGE/BioAssay/BioAssayTreatment.pm blib/lib/Bio/MAGE/BioAssay/BioAssayTreatment.pm cp MAGE/BioAssayData/DerivedBioAssayData.pm blib/lib/Bio/MAGE/BioAssayData/DerivedBioAssayData.pm +cp MAGE/BioAssayData/BioAssayData.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayData.pm +cp MAGE/BioAssay/Image.pm blib/lib/Bio/MAGE/BioAssay/Image.pm +cp MAGE/BioAssayData/BioDataCube.pm blib/lib/Bio/MAGE/BioAssayData/BioDataCube.pm +cp MAGE/BioAssay/PhysicalBioAssay.pm blib/lib/Bio/MAGE/BioAssay/PhysicalBioAssay.pm cp MAGE/BioAssay/Hybridization.pm blib/lib/Bio/MAGE/BioAssay/Hybridization.pm -cp MAGE/BioAssayData/CompositeSequenceDimension.pm blib/lib/Bio/MAGE/BioAssayData/CompositeSequenceDimension.pm -cp MAGE/BioAssay/MeasuredBioAssay.pm blib/lib/Bio/MAGE/BioAssay/MeasuredBioAssay.pm +cp MAGE/BioAssayData.pm blib/lib/Bio/MAGE/BioAssayData.pm +cp MAGE/BioAssayData/DesignElementMapping.pm blib/lib/Bio/MAGE/BioAssayData/DesignElementMapping.pm cp MAGE/BioAssayData/MeasuredBioAssayData.pm blib/lib/Bio/MAGE/BioAssayData/MeasuredBioAssayData.pm -cp MAGE/BioAssayData/BioDataTuples.pm blib/lib/Bio/MAGE/BioAssayData/BioDataTuples.pm -cp MAGE/BioAssay/ImageAcquisition.pm blib/lib/Bio/MAGE/BioAssay/ImageAcquisition.pm -cp MAGE/BioAssayData/BioAssayMapping.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayMapping.pm -cp MAGE/BioAssay/FeatureExtraction.pm blib/lib/Bio/MAGE/BioAssay/FeatureExtraction.pm +cp MAGE/BioAssay/DerivedBioAssay.pm blib/lib/Bio/MAGE/BioAssay/DerivedBioAssay.pm cp MAGE/BioAssayData/BioAssayDatum.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayDatum.pm -cp MAGE/BioAssayData/BioAssayData.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayData.pm -cp MAGE/BioAssay/PhysicalBioAssay.pm blib/lib/Bio/MAGE/BioAssay/PhysicalBioAssay.pm +cp MAGE/BioAssayData/BioAssayMapping.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayMapping.pm +cp MAGE/BioAssayData/BioDataTuples.pm blib/lib/Bio/MAGE/BioAssayData/BioDataTuples.pm +cp MAGE/BioAssay/MeasuredBioAssay.pm blib/lib/Bio/MAGE/BioAssay/MeasuredBioAssay.pm +cp MAGE/BioAssayData/FeatureDimension.pm blib/lib/Bio/MAGE/BioAssayData/FeatureDimension.pm +cp MAGE/BioAssay/BioAssayTreatment.pm blib/lib/Bio/MAGE/BioAssay/BioAssayTreatment.pm cp MAGE/BioAssayData/DesignElementDimension.pm blib/lib/Bio/MAGE/BioAssayData/DesignElementDimension.pm -cp MAGE/BioSequence.pm blib/lib/Bio/MAGE/BioSequence.pm -cp MAGE/BioSequence/SequencePosition.pm blib/lib/Bio/MAGE/BioSequence/SequencePosition.pm -cp MAGE/BioSequence/BioSequence.pm blib/lib/Bio/MAGE/BioSequence/BioSequence.pm -cp MAGE/BioAssayData/QuantitationTypeMap.pm blib/lib/Bio/MAGE/BioAssayData/QuantitationTypeMap.pm -cp MAGE/Describable.pm blib/lib/Bio/MAGE/Describable.pm -cp MAGE/Description/Description.pm blib/lib/Bio/MAGE/Description/Description.pm +cp MAGE/BioAssay/Channel.pm blib/lib/Bio/MAGE/BioAssay/Channel.pm +cp MAGE/BioAssay/BioAssay.pm blib/lib/Bio/MAGE/BioAssay/BioAssay.pm +cp MAGE/BioAssay/FeatureExtraction.pm blib/lib/Bio/MAGE/BioAssay/FeatureExtraction.pm +cp MAGE/BioAssayData/BioAssayMap.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayMap.pm +cp MAGE/BioAssayData/BioAssayDimension.pm blib/lib/Bio/MAGE/BioAssayData/BioAssayDimension.pm +cp MAGE/BioAssayData/BioDataValues.pm blib/lib/Bio/MAGE/BioAssayData/BioDataValues.pm +cp MAGE/BioEvent/BioEvent.pm blib/lib/Bio/MAGE/BioEvent/BioEvent.pm +cp MAGE/BioMaterial/LabeledExtract.pm blib/lib/Bio/MAGE/BioMaterial/LabeledExtract.pm +cp MAGE/BioSequence/SeqFeature.pm blib/lib/Bio/MAGE/BioSequence/SeqFeature.pm cp MAGE/Description/OntologyEntry.pm blib/lib/Bio/MAGE/Description/OntologyEntry.pm +cp MAGE/BioMaterial/BioSource.pm blib/lib/Bio/MAGE/BioMaterial/BioSource.pm +cp MAGE/BioAssayData/Transformation.pm blib/lib/Bio/MAGE/BioAssayData/Transformation.pm +cp MAGE/Description/ExternalReference.pm blib/lib/Bio/MAGE/Description/ExternalReference.pm cp MAGE/BioMaterial.pm blib/lib/Bio/MAGE/BioMaterial.pm +cp MAGE/Describable.pm blib/lib/Bio/MAGE/Describable.pm cp MAGE/BioAssayData/QuantitationTypeMapping.pm blib/lib/Bio/MAGE/BioAssayData/QuantitationTypeMapping.pm cp MAGE/BioMaterial/Compound.pm blib/lib/Bio/MAGE/BioMaterial/Compound.pm -cp MAGE/Description/DatabaseEntry.pm blib/lib/Bio/MAGE/Description/DatabaseEntry.pm +cp MAGE/BioMaterial/CompoundMeasurement.pm blib/lib/Bio/MAGE/BioMaterial/CompoundMeasurement.pm cp MAGE/Description.pm blib/lib/Bio/MAGE/Description.pm +cp MAGE/BioAssayData/QuantitationTypeMap.pm blib/lib/Bio/MAGE/BioAssayData/QuantitationTypeMap.pm +cp MAGE/Description/DatabaseEntry.pm blib/lib/Bio/MAGE/Description/DatabaseEntry.pm +cp MAGE/BioSequence/BioSequence.pm blib/lib/Bio/MAGE/BioSequence/BioSequence.pm +cp MAGE/BioEvent/Map.pm blib/lib/Bio/MAGE/BioEvent/Map.pm +cp MAGE/Description/Database.pm blib/lib/Bio/MAGE/Description/Database.pm cp MAGE/BioMaterial/Treatment.pm blib/lib/Bio/MAGE/BioMaterial/Treatment.pm -cp MAGE/Description/ExternalReference.pm blib/lib/Bio/MAGE/Description/ExternalReference.pm -cp MAGE/DesignElement/CompositeCompositeMap.pm blib/lib/Bio/MAGE/DesignElement/CompositeCompositeMap.pm -cp MAGE/BioSequence/SeqFeatureLocation.pm blib/lib/Bio/MAGE/BioSequence/SeqFeatureLocation.pm +cp MAGE/BioMaterial/BioMaterial.pm blib/lib/Bio/MAGE/BioMaterial/BioMaterial.pm cp MAGE/BioMaterial/BioSample.pm blib/lib/Bio/MAGE/BioMaterial/BioSample.pm -cp MAGE/BioEvent/Map.pm blib/lib/Bio/MAGE/BioEvent/Map.pm +cp MAGE/DesignElement/CompositeCompositeMap.pm blib/lib/Bio/MAGE/DesignElement/CompositeCompositeMap.pm +cp MAGE/DesignElement/CompositePosition.pm blib/lib/Bio/MAGE/DesignElement/CompositePosition.pm +cp MAGE/Description/Description.pm blib/lib/Bio/MAGE/Description/Description.pm +cp MAGE/BioAssayData/ReporterDimension.pm blib/lib/Bio/MAGE/BioAssayData/ReporterDimension.pm +cp MAGE/BioSequence/SequencePosition.pm blib/lib/Bio/MAGE/BioSequence/SequencePosition.pm cp MAGE/BioMaterial/BioMaterialMeasurement.pm blib/lib/Bio/MAGE/BioMaterial/BioMaterialMeasurement.pm -cp MAGE/BioMaterial/LabeledExtract.pm blib/lib/Bio/MAGE/BioMaterial/LabeledExtract.pm -cp MAGE/BioMaterial/BioMaterial.pm blib/lib/Bio/MAGE/BioMaterial/BioMaterial.pm +cp MAGE/BioSequence/SeqFeatureLocation.pm blib/lib/Bio/MAGE/BioSequence/SeqFeatureLocation.pm +cp MAGE/BioSequence.pm blib/lib/Bio/MAGE/BioSequence.pm cp MAGE/BioEvent.pm blib/lib/Bio/MAGE/BioEvent.pm cp MAGE/DesignElement.pm blib/lib/Bio/MAGE/DesignElement.pm -cp MAGE/Description/Database.pm blib/lib/Bio/MAGE/Description/Database.pm -cp MAGE/BioSequence/SeqFeature.pm blib/lib/Bio/MAGE/BioSequence/SeqFeature.pm -cp MAGE/BioEvent/BioEvent.pm blib/lib/Bio/MAGE/BioEvent/BioEvent.pm -cp MAGE/BioMaterial/CompoundMeasurement.pm blib/lib/Bio/MAGE/BioMaterial/CompoundMeasurement.pm -cp MAGE/DesignElement/CompositePosition.pm blib/lib/Bio/MAGE/DesignElement/CompositePosition.pm -cp MAGE/BioAssayData/ReporterDimension.pm blib/lib/Bio/MAGE/BioAssayData/ReporterDimension.pm -cp MAGE/BioAssayData/Transformation.pm blib/lib/Bio/MAGE/BioAssayData/Transformation.pm -cp MAGE/BioMaterial/BioSource.pm blib/lib/Bio/MAGE/BioMaterial/BioSource.pm -cp MAGE/DesignElement/FeatureInformation.pm blib/lib/Bio/MAGE/DesignElement/FeatureInformation.pm -cp MAGE/DesignElement/Reporter.pm blib/lib/Bio/MAGE/DesignElement/Reporter.pm -cp MAGE/HigherLevelAnalysis/NodeContents.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/NodeContents.pm -cp MAGE/Measurement.pm blib/lib/Bio/MAGE/Measurement.pm +cp MAGE/Measurement/ConcentrationUnit.pm blib/lib/Bio/MAGE/Measurement/ConcentrationUnit.pm +cp MAGE/DesignElement/CompositeSequence.pm blib/lib/Bio/MAGE/DesignElement/CompositeSequence.pm +cp MAGE/HigherLevelAnalysis/Node.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/Node.pm +cp MAGE/DesignElement/Feature.pm blib/lib/Bio/MAGE/DesignElement/Feature.pm cp MAGE/Experiment.pm blib/lib/Bio/MAGE/Experiment.pm -cp MAGE/Extendable.pm blib/lib/Bio/MAGE/Extendable.pm +cp MAGE/Measurement/MassUnit.pm blib/lib/Bio/MAGE/Measurement/MassUnit.pm +cp MAGE/Experiment/ExperimentDesign.pm blib/lib/Bio/MAGE/Experiment/ExperimentDesign.pm +cp MAGE/Experiment/ExperimentalFactor.pm blib/lib/Bio/MAGE/Experiment/ExperimentalFactor.pm +cp MAGE/Measurement/Measurement.pm blib/lib/Bio/MAGE/Measurement/Measurement.pm cp MAGE/DesignElement/MismatchInformation.pm blib/lib/Bio/MAGE/DesignElement/MismatchInformation.pm -cp MAGE/DesignElement/FeatureReporterMap.pm blib/lib/Bio/MAGE/DesignElement/FeatureReporterMap.pm -cp MAGE/HigherLevelAnalysis.pm blib/lib/Bio/MAGE/HigherLevelAnalysis.pm -cp MAGE/Identifiable.pm blib/lib/Bio/MAGE/Identifiable.pm -cp MAGE/DesignElement/FeatureLocation.pm blib/lib/Bio/MAGE/DesignElement/FeatureLocation.pm cp MAGE/DesignElement/ReporterPosition.pm blib/lib/Bio/MAGE/DesignElement/ReporterPosition.pm +cp MAGE/DesignElement/Reporter.pm blib/lib/Bio/MAGE/DesignElement/Reporter.pm +cp MAGE/Experiment/FactorValue.pm blib/lib/Bio/MAGE/Experiment/FactorValue.pm +cp MAGE/Measurement/QuantityUnit.pm blib/lib/Bio/MAGE/Measurement/QuantityUnit.pm +cp MAGE/DesignElement/FeatureReporterMap.pm blib/lib/Bio/MAGE/DesignElement/FeatureReporterMap.pm +cp MAGE/Measurement.pm blib/lib/Bio/MAGE/Measurement.pm +cp MAGE/DesignElement/Position.pm blib/lib/Bio/MAGE/DesignElement/Position.pm cp MAGE/Experiment/Experiment.pm blib/lib/Bio/MAGE/Experiment/Experiment.pm -cp MAGE/DesignElement/Feature.pm blib/lib/Bio/MAGE/DesignElement/Feature.pm +cp MAGE/DesignElement/FeatureLocation.pm blib/lib/Bio/MAGE/DesignElement/FeatureLocation.pm +cp MAGE/Identifiable.pm blib/lib/Bio/MAGE/Identifiable.pm +cp MAGE/DesignElement/ReporterCompositeMap.pm blib/lib/Bio/MAGE/DesignElement/ReporterCompositeMap.pm +cp MAGE/DesignElement/FeatureInformation.pm blib/lib/Bio/MAGE/DesignElement/FeatureInformation.pm +cp MAGE/Extendable.pm blib/lib/Bio/MAGE/Extendable.pm cp MAGE/DesignElement/DesignElement.pm blib/lib/Bio/MAGE/DesignElement/DesignElement.pm cp MAGE/Measurement/DistanceUnit.pm blib/lib/Bio/MAGE/Measurement/DistanceUnit.pm -cp MAGE/DesignElement/Position.pm blib/lib/Bio/MAGE/DesignElement/Position.pm -cp MAGE/Measurement/Measurement.pm blib/lib/Bio/MAGE/Measurement/Measurement.pm -cp MAGE/HigherLevelAnalysis/Node.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/Node.pm -cp MAGE/DesignElement/ReporterCompositeMap.pm blib/lib/Bio/MAGE/DesignElement/ReporterCompositeMap.pm -cp MAGE/Experiment/ExperimentDesign.pm blib/lib/Bio/MAGE/Experiment/ExperimentDesign.pm +cp MAGE/HigherLevelAnalysis/NodeContents.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/NodeContents.pm cp MAGE/HigherLevelAnalysis/NodeValue.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/NodeValue.pm -cp MAGE/DesignElement/CompositeSequence.pm blib/lib/Bio/MAGE/DesignElement/CompositeSequence.pm -cp MAGE/Measurement/MassUnit.pm blib/lib/Bio/MAGE/Measurement/MassUnit.pm -cp MAGE/Experiment/FactorValue.pm blib/lib/Bio/MAGE/Experiment/FactorValue.pm -cp MAGE/Measurement/QuantityUnit.pm blib/lib/Bio/MAGE/Measurement/QuantityUnit.pm cp MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm blib/lib/Bio/MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm -cp MAGE/Experiment/ExperimentalFactor.pm blib/lib/Bio/MAGE/Experiment/ExperimentalFactor.pm -cp MAGE/Measurement/ConcentrationUnit.pm blib/lib/Bio/MAGE/Measurement/ConcentrationUnit.pm -cp MAGE/Protocol/Protocol.pm blib/lib/Bio/MAGE/Protocol/Protocol.pm -cp MAGE/Measurement/TimeUnit.pm blib/lib/Bio/MAGE/Measurement/TimeUnit.pm -cp MAGE/QuantitationType/Failed.pm blib/lib/Bio/MAGE/QuantitationType/Failed.pm -cp MAGE/Protocol/Parameter.pm blib/lib/Bio/MAGE/Protocol/Parameter.pm +cp MAGE/HigherLevelAnalysis.pm blib/lib/Bio/MAGE/HigherLevelAnalysis.pm +cp MAGE/QuantitationType/MeasuredSignal.pm blib/lib/Bio/MAGE/QuantitationType/MeasuredSignal.pm +cp MAGE/Measurement/VolumeUnit.pm blib/lib/Bio/MAGE/Measurement/VolumeUnit.pm +cp MAGE/QuantitationType.pm blib/lib/Bio/MAGE/QuantitationType.pm +cp MAGE/Protocol/Hardware.pm blib/lib/Bio/MAGE/Protocol/Hardware.pm cp MAGE/Protocol/SoftwareApplication.pm blib/lib/Bio/MAGE/Protocol/SoftwareApplication.pm -cp MAGE/Measurement/Unit.pm blib/lib/Bio/MAGE/Measurement/Unit.pm +cp MAGE/Protocol/ParameterizableApplication.pm blib/lib/Bio/MAGE/Protocol/ParameterizableApplication.pm +cp MAGE/QuantitationType/DerivedSignal.pm blib/lib/Bio/MAGE/QuantitationType/DerivedSignal.pm +cp MAGE/Protocol.pm blib/lib/Bio/MAGE/Protocol.pm +cp MAGE/QuantitationType/ConfidenceIndicator.pm blib/lib/Bio/MAGE/QuantitationType/ConfidenceIndicator.pm +cp classes.pm blib/lib/Bio/classes.pm +cp MAGE/QuantitationType/Error.pm blib/lib/Bio/MAGE/QuantitationType/Error.pm cp MAGE/QuantitationType/Ratio.pm blib/lib/Bio/MAGE/QuantitationType/Ratio.pm -cp MAGE/Protocol/Software.pm blib/lib/Bio/MAGE/Protocol/Software.pm -cp MAGE/QuantitationType/ExpectedValue.pm blib/lib/Bio/MAGE/QuantitationType/ExpectedValue.pm -cp MAGE/Protocol/HardwareApplication.pm blib/lib/Bio/MAGE/Protocol/HardwareApplication.pm +cp MAGE/Measurement/TemperatureUnit.pm blib/lib/Bio/MAGE/Measurement/TemperatureUnit.pm cp MAGE/NameValueType.pm blib/lib/Bio/MAGE/NameValueType.pm -cp MAGE/QuantitationType/QuantitationType.pm blib/lib/Bio/MAGE/QuantitationType/QuantitationType.pm +cp MAGE/Protocol/Protocol.pm blib/lib/Bio/MAGE/Protocol/Protocol.pm +cp MAGE/QuantitationType/SpecializedQuantitationType.pm blib/lib/Bio/MAGE/QuantitationType/SpecializedQuantitationType.pm +cp MAGE/Protocol/Parameter.pm blib/lib/Bio/MAGE/Protocol/Parameter.pm +cp MAGE/QuantitationType/Failed.pm blib/lib/Bio/MAGE/QuantitationType/Failed.pm cp MAGE/QuantitationType/PresentAbsent.pm blib/lib/Bio/MAGE/QuantitationType/PresentAbsent.pm -cp MAGE/Protocol.pm blib/lib/Bio/MAGE/Protocol.pm -cp MAGE/QuantitationType/DerivedSignal.pm blib/lib/Bio/MAGE/QuantitationType/DerivedSignal.pm -cp MAGE/QuantitationType/PValue.pm blib/lib/Bio/MAGE/QuantitationType/PValue.pm -cp MAGE/Protocol/Parameterizable.pm blib/lib/Bio/MAGE/Protocol/Parameterizable.pm -cp MAGE/Measurement/TemperatureUnit.pm blib/lib/Bio/MAGE/Measurement/TemperatureUnit.pm -cp MAGE/Protocol/ParameterizableApplication.pm blib/lib/Bio/MAGE/Protocol/ParameterizableApplication.pm -cp MAGE/QuantitationType/MeasuredSignal.pm blib/lib/Bio/MAGE/QuantitationType/MeasuredSignal.pm +cp MAGE/Protocol/HardwareApplication.pm blib/lib/Bio/MAGE/Protocol/HardwareApplication.pm cp MAGE/Protocol/ProtocolApplication.pm blib/lib/Bio/MAGE/Protocol/ProtocolApplication.pm -cp MAGE/Protocol/Hardware.pm blib/lib/Bio/MAGE/Protocol/Hardware.pm -cp MAGE/QuantitationType/Error.pm blib/lib/Bio/MAGE/QuantitationType/Error.pm -cp MAGE/QuantitationType.pm blib/lib/Bio/MAGE/QuantitationType.pm -cp MAGE/Measurement/VolumeUnit.pm blib/lib/Bio/MAGE/Measurement/VolumeUnit.pm -cp MAGE/QuantitationType/ConfidenceIndicator.pm blib/lib/Bio/MAGE/QuantitationType/ConfidenceIndicator.pm -cp MAGE/Protocol/ParameterValue.pm blib/lib/Bio/MAGE/Protocol/ParameterValue.pm -cp classes.pm blib/lib/Bio/classes.pm cp MAGE/QuantitationType/StandardQuantitationType.pm blib/lib/Bio/MAGE/QuantitationType/StandardQuantitationType.pm -cp MAGE/QuantitationType/SpecializedQuantitationType.pm blib/lib/Bio/MAGE/QuantitationType/SpecializedQuantitationType.pm +cp MAGE/Protocol/ParameterValue.pm blib/lib/Bio/MAGE/Protocol/ParameterValue.pm +cp MAGE/Protocol/Software.pm blib/lib/Bio/MAGE/Protocol/Software.pm +cp MAGE/QuantitationType/PValue.pm blib/lib/Bio/MAGE/QuantitationType/PValue.pm +cp MAGE/Measurement/TimeUnit.pm blib/lib/Bio/MAGE/Measurement/TimeUnit.pm +cp MAGE/Measurement/Unit.pm blib/lib/Bio/MAGE/Measurement/Unit.pm +cp MAGE/QuantitationType/QuantitationType.pm blib/lib/Bio/MAGE/QuantitationType/QuantitationType.pm +cp MAGE/Protocol/Parameterizable.pm blib/lib/Bio/MAGE/Protocol/Parameterizable.pm +cp MAGE/QuantitationType/ExpectedValue.pm blib/lib/Bio/MAGE/QuantitationType/ExpectedValue.pm Manifying 29 pod documents Manifying 28 pod documents Manifying 27 pod documents @@ -17407,7 +17443,7 @@ ok 62 - An object of class 'Bio::MAGE::ArrayDesign::ZoneLayout' isa 'Bio::MAGE::Extendable' ok All tests successful. -Files=151, Tests=16488, 16 wallclock secs ( 1.68 usr 0.45 sys + 13.27 cusr 2.46 csys = 17.86 CPU) +Files=151, Tests=16488, 25 wallclock secs ( 0.73 usr 0.40 sys + 11.17 cusr 1.88 csys = 14.18 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-mage-perl-20030502.3' create-stamp debian/debhelper-build-stamp @@ -17423,156 +17459,156 @@ Manifying 12 pod documents Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/classes.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/NameValueType.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Identifiable.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Extendable.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Identifiable.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioEvent.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Describable.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BQS.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Association.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BQS.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Association.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Base.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/SpecializedQuantitationType.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/StandardQuantitationType.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/ConfidenceIndicator.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Error.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/MeasuredSignal.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/PValue.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/DerivedSignal.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/PresentAbsent.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/QuantitationType.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/ExpectedValue.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Ratio.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Failed.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Parameterizable.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Software.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/ParameterValue.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Hardware.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/ProtocolApplication.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/ParameterizableApplication.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Parameterizable.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/HardwareApplication.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Software.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/SoftwareApplication.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Parameter.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Protocol.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/VolumeUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/TemperatureUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/Unit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/TimeUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/ConcentrationUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/QuantityUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/MassUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/Measurement.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/DistanceUnit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/ExperimentalFactor.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/ParameterizableApplication.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/SoftwareApplication.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Protocol/Hardware.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/ExpectedValue.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/QuantitationType.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/PValue.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/StandardQuantitationType.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/PresentAbsent.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Failed.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/SpecializedQuantitationType.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Ratio.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/Error.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/ConfidenceIndicator.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/DerivedSignal.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/QuantitationType/MeasuredSignal.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/Experiment.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/FactorValue.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/ExperimentalFactor.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/ExperimentDesign.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Experiment/Experiment.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis/NodeValue.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis/Node.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis/NodeContents.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioEvent/BioEvent.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioEvent/Map.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/CompositeSequence.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/ReporterCompositeMap.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/Position.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/HigherLevelAnalysis/Node.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/Unit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/TimeUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/TemperatureUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/VolumeUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/DistanceUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/QuantityUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/Measurement.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/MassUnit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Measurement/ConcentrationUnit.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/DesignElement.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/Feature.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/ReporterPosition.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/FeatureInformation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/ReporterCompositeMap.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/FeatureLocation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/Position.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/FeatureReporterMap.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/MismatchInformation.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/Reporter.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/FeatureInformation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/ReporterPosition.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/MismatchInformation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/Feature.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/CompositeSequence.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/CompositePosition.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/DesignElement/CompositeCompositeMap.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioSource.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/CompoundMeasurement.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioMaterial.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/LabeledExtract.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioMaterialMeasurement.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioSample.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/Treatment.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/Compound.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/Description.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/Database.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/ExternalReference.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/DatabaseEntry.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/ExternalReference.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/OntologyEntry.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Description/Description.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/SeqFeature.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/SeqFeatureLocation.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/BioSequence.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/SequencePosition.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/PhysicalBioAssay.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/BioSequence.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioSequence/SeqFeature.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioMaterialMeasurement.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioSample.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioMaterial.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/Treatment.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/CompoundMeasurement.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/Compound.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/BioSource.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioMaterial/LabeledExtract.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioEvent/Map.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioEvent/BioEvent.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/FeatureExtraction.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/ImageAcquisition.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/BioAssay.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/Channel.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/BioAssayTreatment.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/MeasuredBioAssay.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/DerivedBioAssay.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/Hybridization.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/BioAssayTreatment.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/Channel.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/PhysicalBioAssay.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/Image.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/DerivedBioAssay.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/BioAssayCreation.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/BioAssay.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/Transformation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssay/ImageAcquisition.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/ReporterDimension.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/QuantitationTypeMapping.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/QuantitationTypeMap.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/QuantitationTypeMapping.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/Transformation.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioDataValues.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayDimension.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayMap.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/DesignElementDimension.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayData.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayDatum.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayMapping.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/FeatureDimension.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioDataTuples.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayMapping.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayDatum.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/MeasuredBioAssayData.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/CompositeSequenceDimension.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/DerivedBioAssayData.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioDataValues.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/QuantitationTypeDimension.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/FeatureDimension.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayMap.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayDimension.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/DesignElementMapping.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioDataCube.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/BioAssayData.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/DerivedBioAssayData.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/DesignElementMap.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Audit.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Security.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Contact.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Person.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/SecurityGroup.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Organization.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/CompositeSequenceDimension.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BioAssayData/QuantitationTypeDimension.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/BQS/BibliographicReference.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ZoneGroup.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/DesignElementGroup.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/Zone.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/CompositeGroup.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/PhysicalArrayDesign.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ZoneLayout.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/CompositeGroup.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/FeatureGroup.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ArrayDesign.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/DesignElementGroup.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ZoneLayout.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/Zone.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ZoneGroup.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ReporterGroup.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/ArrayDesign/ArrayDesign.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Organization.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Security.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Contact.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Audit.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/SecurityGroup.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/AuditAndSecurity/Person.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ZoneDefect.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ManufactureLIMSBiomaterial.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/Fiducial.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ArrayManufactureDeviation.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/FeatureDefect.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ManufactureLIMS.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ArrayManufacture.pm +Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/FeatureDefect.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/PositionDelta.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/Fiducial.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ArrayGroup.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ManufactureLIMSBiomaterial.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/Array.pm -Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/perl5/Bio/MAGE/Array/ZoneDefect.pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/man/man3/Bio::MAGE::QuantitationType::StandardQuantitationType.3pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/man/man3/Bio::MAGE::QuantitationType::SpecializedQuantitationType.3pm Installing /build/reproducible-path/libbio-mage-perl-20030502.3/debian/libbio-mage-perl/usr/share/man/man3/Bio::MAGE::QuantitationType::Ratio.3pm @@ -17746,12 +17782,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3379647/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/594903 and its subdirectories -I: Current time: Mon Feb 23 03:44:45 -12 2026 -I: pbuilder-time-stamp: 1771861485 +I: removing directory /srv/workspace/pbuilder/3379647 and its subdirectories +I: Current time: Tue Jan 21 23:23:21 +14 2025 +I: pbuilder-time-stamp: 1737451401