Diff of the two buildlogs: -- --- b1/build.log 2024-12-23 03:03:02.004012520 +0000 +++ b2/build.log 2024-12-23 03:55:07.954393042 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Dec 22 14:29:11 -12 2024 -I: pbuilder-time-stamp: 1734920951 +I: Current time: Sun Jan 25 23:27:33 +14 2026 +I: pbuilder-time-stamp: 1769333253 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -48,52 +48,84 @@ dpkg-source: info: applying big_endian_workaround I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3445803/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 25 09:27 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='9e45a6cb39ef4771a49566fc5f76e3ab' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3445803' - PS1='# ' - PS2='> ' + INVOCATION_ID=f40a0c483e834c17940c8d752071df99 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=837185 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OLZxOj9q/pbuilderrc_j5Ny --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OLZxOj9q/b1 --logfile b1/build.log ncbi-blast+_2.16.0+ds-6.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OLZxOj9q/pbuilderrc_qyYN --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OLZxOj9q/b2 --logfile b2/build.log ncbi-blast+_2.16.0+ds-6.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3445803/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -223,7 +255,7 @@ Get: 66 http://deb.debian.org/debian trixie/main arm64 libuv1-dev arm64 1.48.0-7 [181 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 time arm64 1.9-0.2+b1 [48.1 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] -Fetched 43.4 MB in 0s (113 MB/s) +Fetched 43.4 MB in 0s (95.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20083 files and directories currently installed.) @@ -510,7 +542,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-6_source.changes dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.16.0+ds-6 dpkg-buildpackage: info: source distribution unstable @@ -541,79 +577,79 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objects/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.in: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.sources: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.cmd: Not a directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.sh: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:178: override_dh_clean] Error 127 (ignored) for x in c++/src/objtools/eutils/* ; do \ (cd "$x" && ( \ @@ -624,23 +660,23 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/Makefile.in -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objtools/eutils/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objtools/eutils/Makefile.in: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:179: override_dh_clean] Error 127 (ignored) cd c++/src/objtools/eutils/efetch && \ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch purge_sources -/bin/sh: 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:180: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -1867,1908 +1903,1902 @@ make[3]: warning: -j12 forced in submake: resetting jobserver mode. cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd serial/datatool/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd serial/datatool/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. /usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. +cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' /usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/logging/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -cd objtools/readers/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd objtools/readers/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +cd objmgr/util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +cd objtools/seqmasks_io/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objmgr/util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -cd objtools/seqmasks_io/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' cd algo/blast/dbindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 flag-stamps -cd algo/dustmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. +/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' /usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd connect/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/services/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' /usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' cd objtools/align_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' /usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +NOTE: skipping project "fcgi_mt" due to unmet requirements +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -NOTE: skipping project "fcgi_mt" due to unmet requirements -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd objtools/edit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/edit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd objtools/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd objtools/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' NOTE: skipping project "fcgi_mt" due to unmet requirements -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' cd algo/blast/igblast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd app/segmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/segmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 flag-stamps -cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 flag-stamps -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j12 --jobserver-auth=9,10 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -w -j12 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 flag-stamps cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -w -j12 --jobserver-auth=9,10 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd util/tables/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd objtools/logging/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd db/sqlite/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +cd objtools/logging/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd util/profile/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -w -j12 --jobserver-auth=7,8 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefixmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' cd html/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefixmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) | ^~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] - 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] - 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) - | ^~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] + 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] + 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) + | ^~~~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o @@ -3776,36 +3806,43 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd corelib/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.so .libtables.so.stamp @@ -3814,90 +3851,93 @@ /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so /bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd util/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 flag-stamps cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +cd util/sequtil/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cppmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c -o ncbi_lbsm.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c -o ncbi_lbsm_ipc.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -3905,33 +3945,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c -o ncbi_lbsm.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c -o ncbi_lbsm_ipc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c:34: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:37: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 flag-stamps antic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 's_Shmem_Lock': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -3965,6 +4014,47 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:206:13: note: in expansion of macro 'CORE_LOGF_X' 206 | CORE_LOGF_X(8, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' + 63 | METACONN_LOG(34, eLOG_Error, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' + 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, + | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 's_Shmem_WLock': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4026,24 +4116,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:298:13: note: in expansion of macro 'CORE_LOGF_X' 298 | CORE_LOGF_X(20, eLOG_Warning, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' - 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); - | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4259,74 +4331,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:647:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 647 | CORE_LOGF_ERRNO_X(21, eLOG_Warning, errno, | ^~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 168 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' - 63 | METACONN_LOG(34, eLOG_Error, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' - 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, - | ^~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': @@ -4351,7 +4361,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:289:13: note: in expansion of macro 'CONN_LOG' 289 | CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed"); | ^~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4438,6 +4447,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:447:9: note: in expansion of macro 'CONN_LOG' 447 | CONN_LOG(2, Create, eLOG_Error, "NULL connector"); | ^~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' + 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4509,12 +4536,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 477 | CONN_NOT_NULL_EX(6, GetType, 0); | ^~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4601,6 +4622,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:498:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 498 | CONN_NOT_NULL_EX(30, GetPosition, 0); | ^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 168 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4640,12 +4679,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:511:9: note: in expansion of macro 'CONN_LOG_EX' 511 | CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4735,6 +4768,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:583:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 583 | CONN_NOT_NULL_EX(10, GetTimeout, 0); | ^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4792,6 +4834,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:606:9: note: in expansion of macro 'CONN_LOG_EX' 606 | CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4829,6 +4874,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' + 570 | CORE_LOGF_X(112, level, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' 72 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -4847,6 +4907,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' + 609 | CORE_DATAF_X(109, level, data, size, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -4862,6 +4937,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:670:9: note: in expansion of macro 'CONN_LOG' 670 | CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level, | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' + 641 | CORE_LOGF_X(113, level, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' + 649 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4884,6 +4989,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:691:9: note: in expansion of macro 'CONN_LOG' 691 | CONN_LOG(16, Write, eLOG_Critical, "Cannot write data"); | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' + 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4905,6 +5026,89 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:735:13: note: in expansion of macro 'CONN_LOG' 735 | CONN_LOG(17, Write, level, "Unable to write data"); | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] + 952 | sprintf(buf, "%p()", s_SSLSetup); + | ~^ ~~~~~~~~~~ + | | | + | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} + | void * +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' + 956 | CORE_LOGF(eLOG_Critical, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' + 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' + 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' + 1130 | CORE_LOGF_X(104, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' + 1138 | CORE_LOGF_X(162, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5004,6 +5208,57 @@ 818 | CONN_NOT_NULL(19, Pushback); | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' + 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' + 1384 | CORE_LOGF_X(155, eLOG_Warning, + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5095,23 +5350,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:877:9: note: in expansion of macro 'CONN_LOG' 877 | CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectio.cpp -o objectio.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -f/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -5129,6 +5368,102 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:919:17: note: in expansion of macro 'CONN_LOG_EX' 919 | CONN_LOG_EX(32, Read, eLOG_Critical, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' + 1551 | CORE_LOGF_X(10, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' + 1604 | CORE_LOGF_X(163, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' + 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' + 1766 | CORE_LOGF_X(111, eLOG_Trace, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' + 745 | CORE_LOGF_X(11, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5230,6 +5565,52 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' + 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5291,24 +5672,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1120:5: note: in expansion of macro 'CONN_NOT_NULL' 1120 | CONN_NOT_NULL(26, Status); | ^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' - 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5333,6 +5696,39 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1120:5: note: in expansion of macro 'CONN_NOT_NULL' 1120 | CONN_NOT_NULL(26, Status); | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Close': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5358,22 +5754,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1166:5: note: in expansion of macro 'CONN_NOT_NULL' 1166 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' - 745 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5398,21 +5778,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1166:5: note: in expansion of macro 'CONN_NOT_NULL' 1166 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' - 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5438,6 +5803,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1186:5: note: in expansion of macro 'CONN_NOT_NULL' 1186 | CONN_NOT_NULL(28, SetCallback); | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' + 2850 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5505,17 +5888,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' 1218 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. --map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o -/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so -/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUIL/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -5539,33 +5912,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' 1218 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' - 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': -D/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' - 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5575,65 +5939,61 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' - 2396 | CORE_LOGF_X(3, eLOG_Warning, - | ^~~~~~~~~~~ - -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pathIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' + 2898 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' - 570 | CORE_LOGF_X(112, level, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' - 609 | CORE_DATAF_X(109, level, data, size, - | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' + 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, + | ^~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' - 641 | CORE_LOGF_X(113, level, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5643,13 +6003,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' - 649 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' + 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); + | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5662,9 +6025,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' - 2419 | CORE_LOGF_X(4, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' + 2396 | CORE_LOGF_X(3, eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5674,12 +6038,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5689,34 +6054,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' - 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] - 952 | sprintf(buf, "%p()", s_SSLSetup); - | ~^ ~~~~~~~~~~ - | | | - | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} - | void * -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' - 956 | CORE_LOGF(eLOG_Critical, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5726,13 +6069,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' - 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' + 2419 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5742,43 +6084,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' - 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' - 1130 | CORE_LOGF_X(104, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' - 1138 | CORE_LOGF_X(162, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5791,9 +6118,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5810,8 +6146,7 @@ 2535 | CORE_LOGF_X(7, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -cd util/compress/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5836,21 +6171,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' + 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' 2573 | CORE_LOG_X(9, eLOG_Error, | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5878,42 +6219,40 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' - 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' - 1384 | CORE_LOGF_X(155, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5926,42 +6265,69 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' - 1551 | CORE_LOGF_X(10, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ + -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' - 1604 | CORE_LOGF_X(163, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' + 4350 | CORE_LOGF_X(142, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5974,14 +6340,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' - 1766 | CORE_LOGF_X(111, eLOG_Trace, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' + 4375 | CORE_LOGF_X(22, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5991,13 +6352,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6010,10 +6370,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6023,21 +6382,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6050,13 +6400,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6066,12 +6417,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' - 2850 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:122:9: note: in expansion of macro 'CORE_LOGF_X' + 122 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:161:17: note: in expansion of macro 'CORE_LOGF_X' + 161 | CORE_LOGF_X(8, eLOG_Error, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6084,9 +6451,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6096,13 +6480,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' - 2898 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' + 447 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -6115,15 +6502,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6136,8 +6521,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:122:9: note: in expansion of macro 'CORE_LOGF_X' - 122 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' + 4787 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6145,16 +6530,48 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] + 1241 | free(svc); + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1239:25: note: call to 'realloc' here + 1239 | if (!(buf = (char*) realloc(svc, len + sizeof(CONN_IMPLICIT_SERVER_TYPE) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1240 | + 2/*"=\0"*/) + strlen(typ))) { + | ~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:161:17: note: in expansion of macro 'CORE_LOGF_X' - 161 | CORE_LOGF_X(8, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' + 4889 | CORE_LOGF_X(48, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6164,37 +6581,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' - 447 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6207,14 +6615,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': @@ -6236,17 +6639,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:415:13: note: in expansion of macro 'SENDMAIL_RETURN' 415 | SENDMAIL_RETURN(3, "Recipient address is too long"); | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] - 1241 | free(svc); - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1239:25: note: call to 'realloc' here - 1239 | if (!(buf = (char*) realloc(svc, len + sizeof(CONN_IMPLICIT_SERVER_TYPE) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1240 | + 2/*"=\0"*/) + strlen(typ))) { - | ~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6344,6 +6736,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5065:17: note: in expansion of macro 'CORE_LOGF' + 5065 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -6371,12 +6778,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:508:9: note: in expansion of macro 'SENDMAIL_RETURN2' 508 | SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6455,6 +6856,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6485,25 +6901,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:550:9: note: in expansion of macro 'SENDMAIL_RETURN' 550 | SENDMAIL_RETURN(15, "Write error in DATA command"); | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6582,6 +6979,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5105:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5105 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6687,6 +7114,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6705,21 +7148,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6798,6 +7226,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' + 5220 | CORE_LOGF_X(144, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ @@ -6858,69 +7301,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:728:9: note: in expansion of macro 'SENDMAIL_RETURN2' 728 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' - 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -w -j12 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:115: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': @@ -7017,6 +7397,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X' 451 | CORE_LOGF_X(8, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Take': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:636:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] 636 | return &b->head; @@ -7195,6 +7590,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7256,21 +7668,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7302,6 +7699,37 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7341,24 +7769,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1056:9: note: in expansion of macro 'CORE_LOGF_X' 1056 | CORE_LOGF_X(23, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 flag-stamps - \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7389,21 +7799,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1158:17: note: in expansion of macro 'CORE_LOGF_X' 1158 | CORE_LOGF_X(20, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1176:13: note: in expansion of macro 'CORE_LOGF_X' - 1176 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7416,26 +7831,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1187:17: note: in expansion of macro 'CORE_LOGF_X' - 1187 | CORE_LOGF_X(24, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1176:13: note: in expansion of macro 'CORE_LOGF_X' + 1176 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7448,9 +7846,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' - 4350 | CORE_LOGF_X(142, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1187:17: note: in expansion of macro 'CORE_LOGF_X' + 1187 | CORE_LOGF_X(24, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7488,10 +7887,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1242:65: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] 1242 | for (n = s_HEAP_Walk(heap, ptr); n; n = s_HEAP_Walk(heap, &n->head)) { | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1246:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 1246 | return &n->head; - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7504,9 +7899,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' - 4375 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' + 5521 | CORE_LOGF_X(115, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1246:12: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 1246 | return &n->head; + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7522,21 +7922,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1325:9: note: in expansion of macro 'CORE_LOGF_X' 1325 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' + 5558 | CORE_LOGF_X(39, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7549,9 +7964,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o +/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so +/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7564,8 +7991,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7579,29 +8006,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7615,26 +8022,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': +D/build/algo/blast/composition_adjustment' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7647,8 +8039,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' - 4787 | CORE_LOGF_X(47, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' + 5822 | CORE_LOGF_X(44, eLOG_Note, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7662,10 +8054,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7678,8 +8072,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' - 4889 | CORE_LOGF_X(48, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' + 5942 | CORE_LOGF_X(20, eLOG_Critical, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7693,50 +8087,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' + 6042 | CORE_LOGF_X(88, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' + 6051 | CORE_LOGF_X(89, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7746,12 +8132,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5065:17: note: in expansion of macro 'CORE_LOGF' - 5065 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' + 6108 | CORE_LOGF_X(90, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7764,9 +8152,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7776,12 +8172,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5105:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5105 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7791,12 +8187,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7806,13 +8208,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7825,90 +8226,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_X' - 5220 | CORE_LOGF_X(144, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' + 6303 | CORE_LOGF_X(116, eLOG_Note, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5262:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5262 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5389:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5389 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cpp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' + 6359 | CORE_LOGF_X(117, eLOG_Note, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7921,10 +8260,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' - 5521 | CORE_LOGF_X(115, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' + 6584 | CORE_LOGF_X(46, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7937,24 +8276,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' - 5558 | CORE_LOGF_X(39, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' + 6752 | CORE_LOGF_X(52, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' + 6762 | CORE_LOGF_X(53, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7962,80 +8303,31 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j12 --jobserver-auth=7,8 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' - 5822 | CORE_LOGF_X(44, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' + 6773 | CORE_LOGF_X(51, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' + 6810 | CORE_LOGF_X(54, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8048,28 +8340,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' - 5942 | CORE_LOGF_X(20, eLOG_Critical, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' + 6817 | CORE_LOGF_X(55, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' + 6825 | CORE_LOGF_X(15, eLOG_Error, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': @@ -8088,10 +8376,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:173:13: note: in expansion of macro 'CORE_LOGF_X' 173 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8104,8 +8390,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' - 6042 | CORE_LOGF_X(88, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' + 6971 | CORE_LOGF_X(56, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8119,9 +8405,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' - 6051 | CORE_LOGF_X(89, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' + 6999 | CORE_LOGF_X(57, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8134,76 +8420,40 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' - 6108 | CORE_LOGF_X(90, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' + 7013 | CORE_LOGF_X(58, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' + 7027 | CORE_LOGF_X(59, eLOG_Warning, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7036:17: note: in expansion of macro 'CORE_LOGF_X' + 7036 | CORE_LOGF_X(60, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8216,10 +8466,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' - 6303 | CORE_LOGF_X(116, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' + 7046 | CORE_LOGF_X(61, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -8234,37 +8483,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' - 6359 | CORE_LOGF_X(117, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' + 7056 | CORE_LOGF_X(62, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/re/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8277,23 +8506,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X' - 105 | CORE_LOGF_X(5, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' + 7225 | CORE_LOGF_X(63, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:182:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] - 182 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 - | ~^ ~~ - | | | - | int * unsigned int * - | %n -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:183:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] - 183 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 - | ~^ ~~ - | | | - | int * unsigned int * - | %n -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8306,9 +8527,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:960:13: note: in expansion of macro 'CORE_LOGF_X' - 960 | CORE_LOGF_X(4, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' + 7266 | CORE_LOGF_X(64, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8321,10 +8548,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:984:13: note: in expansion of macro 'CORE_LOGF_X' - 984 | CORE_LOGF_X(9, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' + 7308 | CORE_LOGF_X(65, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8337,9 +8563,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1201:13: note: in expansion of macro 'CORE_LOGF_X' - 1201 | CORE_LOGF_X(6, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' + 7318 | CORE_LOGF_X(66, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8352,16 +8581,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' - 1213 | CORE_LOGF_X(10, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' + 7352 | CORE_LOGF_X(125, eLOG_Error, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:38: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8374,12 +8599,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:595:17: note: in expansion of macro 'CORE_LOGF_X' - 595 | CORE_LOGF_X(2, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' + 7405 | CORE_LOGF_X(165, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8392,9 +8614,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:609:17: note: in expansion of macro 'CORE_LOGF_X' - 609 | CORE_LOGF_X(17, eLOG_Trace, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' + 7422 | CORE_LOGF_X(166, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8407,9 +8630,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:667:17: note: in expansion of macro 'CORE_LOGF_X' - 667 | CORE_LOGF_X(3, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' + 7455 | CORE_LOGF_X(67, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8422,8 +8646,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:678:17: note: in expansion of macro 'CORE_LOGF_X' - 678 | CORE_LOGF_X(18, eLOG_Trace, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' + 7512 | CORE_LOGF_X(68, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8437,8 +8661,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:688:13: note: in expansion of macro 'CORE_LOGF_X' - 688 | CORE_LOGF_X(4, eLOG_Critical, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' + 7539 | CORE_LOGF_X(69, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8452,10 +8676,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:710:9: note: in expansion of macro 'CORE_LOGF_X' - 710 | CORE_LOGF_X(1, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' + 7549 | CORE_LOGF_X(70, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8468,20 +8692,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:827:13: note: in expansion of macro 'CORE_LOGF_X' - 827 | CORE_LOGF_X(5, eLOG_Critical, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' + 7568 | CORE_LOGF_X(71, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8494,10 +8707,19 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:148:13: note: in expansion of macro 'CORE_LOGF_X' - 148 | CORE_LOGF_X(7, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' + 7575 | CORE_LOGF_X(72, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': +/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -8509,9 +8731,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:153:17: note: in expansion of macro 'CORE_LOGF_X' - 153 | CORE_LOGF_X(9, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' + 7722 | CORE_LOGF_X(73, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8524,9 +8751,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:167:17: note: in expansion of macro 'CORE_LOGF_X' - 167 | CORE_LOGF_X(11, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' + 7784 | CORE_LOGF_X(158, eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8539,9 +8769,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:171:17: note: in expansion of macro 'CORE_LOGF_X' - 171 | CORE_LOGF_X(8, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' + 7791 | CORE_LOGF_X(159, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8554,10 +8800,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:188:13: note: in expansion of macro 'CORE_LOGF_X' - 188 | CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseCntl': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' + 7826 | CORE_LOGF_X(156, eLOG_Warning, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8570,10 +8816,50 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:212:9: note: in expansion of macro 'CORE_LOGF_X' - 212 | CORE_LOGF_X(10, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' + 7833 | CORE_LOGF_X(157, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8586,10 +8872,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:387:17: note: in expansion of macro 'CORE_LOGF_X' - 387 | CORE_LOGF_X(4, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8017:9: note: in expansion of macro 'CORE_LOGF_X' + 8017 | CORE_LOGF_X(79, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8602,9 +8887,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' - 6584 | CORE_LOGF_X(46, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' + 8024 | CORE_LOGF_X(78, eLOG_Error, | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:38: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8614,12 +8903,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:998:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 998 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8042 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8632,10 +8921,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' - 630 | CORE_LOGF_X(3, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:595:17: note: in expansion of macro 'CORE_LOGF_X' + 595 | CORE_LOGF_X(2, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8648,10 +8936,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1041:9: note: in expansion of macro 'CORE_LOGF_X' - 1041 | CORE_LOGF_X(2, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:609:17: note: in expansion of macro 'CORE_LOGF_X' + 609 | CORE_LOGF_X(17, eLOG_Trace, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8664,10 +8951,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1204:21: note: in expansion of macro 'CORE_LOGF_X' - 1204 | CORE_LOGF_X(5, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:667:17: note: in expansion of macro 'CORE_LOGF_X' + 667 | CORE_LOGF_X(3, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8680,10 +8966,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' - 6752 | CORE_LOGF_X(52, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPollCntl': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:678:17: note: in expansion of macro 'CORE_LOGF_X' + 678 | CORE_LOGF_X(18, eLOG_Trace, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8696,10 +8981,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1743:13: note: in expansion of macro 'CORE_LOGF_X' - 1743 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:688:13: note: in expansion of macro 'CORE_LOGF_X' + 688 | CORE_LOGF_X(4, eLOG_Critical, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8712,11 +8996,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2012:9: note: in expansion of macro 'CORE_LOGF_X' - 2012 | CORE_LOGF_X(13, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:710:9: note: in expansion of macro 'CORE_LOGF_X' + 710 | CORE_LOGF_X(1, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8729,9 +9012,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2088:17: note: in expansion of macro 'CORE_LOGF_X' - 2088 | CORE_LOGF_X(6, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:827:13: note: in expansion of macro 'CORE_LOGF_X' + 827 | CORE_LOGF_X(5, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8058:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8058 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8744,10 +9043,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1229:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1229 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:998:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 998 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8760,25 +9059,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1377:9: note: in expansion of macro 'CORE_LOGF_X' - 1377 | CORE_LOGF_X(23, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8088:9: note: in expansion of macro 'CORE_LOGF_X' + 8088 | CORE_LOGF_X(82, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2417:9: note: in expansion of macro 'CORE_LOG' - 2417 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1229:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1229 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8791,8 +9090,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' - 6762 | CORE_LOGF_X(53, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1377:9: note: in expansion of macro 'CORE_LOGF_X' + 1377 | CORE_LOGF_X(23, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkTail': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -8810,6 +9109,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1419:9: note: in expansion of macro 'CORE_LOGF_X' 1419 | CORE_LOGF_X(25, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8095:9: note: in expansion of macro 'CORE_LOGF_X' + 8095 | CORE_LOGF_X(81, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8841,28 +9155,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1485:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 1485 | CORE_LOGF_ERRNO_X(25, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' - 6773 | CORE_LOGF_X(51, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': -.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8905,24 +9198,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' - 6810 | CORE_LOGF_X(54, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' - 6817 | CORE_LOGF_X(55, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' + 8114 | CORE_LOGF_X(83, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8969,6 +9246,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1706:17: note: in expansion of macro 'CORE_DATAF_X' 1706 | CORE_DATAF_X(9, eLOG_Note, hdr, size, | ^~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8981,8 +9259,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' - 6825 | CORE_LOGF_X(15, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8127:9: note: in expansion of macro 'CORE_LOGF_X' + 8127 | CORE_LOGF_X(84, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8999,7 +9277,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1757:25: note: in expansion of macro 'CORE_LOGF_X' 1757 | CORE_LOGF_X(10, eLOG_Critical, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9015,6 +9292,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1939:21: note: in expansion of macro 'CORE_LOGF_X' 1939 | CORE_LOGF_X(26, eLOG_Warning, | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9024,12 +9309,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1965:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1965 | CORE_LOGF_ERRNO_X(11, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8156:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9042,9 +9328,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2012:13: note: in expansion of macro 'CORE_LOGF_X' - 2012 | CORE_LOGF_X(19, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8184:9: note: in expansion of macro 'CORE_LOGF_X' + 8184 | CORE_LOGF_X(96, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1965:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1965 | CORE_LOGF_ERRNO_X(11, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9057,9 +9360,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' - 6971 | CORE_LOGF_X(56, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2012:13: note: in expansion of macro 'CORE_LOGF_X' + 2012 | CORE_LOGF_X(19, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9105,15 +9408,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2036:17: note: in expansion of macro 'CORE_DATAF_X' 2036 | CORE_DATAF_X(14, eLOG_Note, s, n, | ^~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9126,10 +9420,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' - 6999 | CORE_LOGF_X(57, eLOG_Warning, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8191:9: note: in expansion of macro 'CORE_LOGF_X' + 8191 | CORE_LOGF_X(95, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9142,9 +9435,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' - 7013 | CORE_LOGF_X(58, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2045:13: note: in expansion of macro 'CORE_LOGF_X' + 2045 | CORE_LOGF_X(15, eLOG_Error, | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9157,9 +9456,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2045:13: note: in expansion of macro 'CORE_LOGF_X' - 2045 | CORE_LOGF_X(15, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2228:17: note: in expansion of macro 'CORE_LOGF_X' + 2228 | CORE_LOGF_X(16, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9172,11 +9471,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' - 7027 | CORE_LOGF_X(59, eLOG_Warning, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2276:13: note: in expansion of macro 'CORE_LOGF_X' + 2276 | CORE_LOGF_X(21, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9189,9 +9486,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2228:17: note: in expansion of macro 'CORE_LOGF_X' - 2228 | CORE_LOGF_X(16, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8244:9: note: in expansion of macro 'CORE_LOGF_X' + 8244 | CORE_LOGF_X(93, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9204,9 +9503,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2276:13: note: in expansion of macro 'CORE_LOGF_X' - 2276 | CORE_LOGF_X(21, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X' + 105 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:182:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] + 182 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:183:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] + 183 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9219,10 +9532,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7036:17: note: in expansion of macro 'CORE_LOGF_X' - 7036 | CORE_LOGF_X(60, eLOG_Warning, - | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8251:9: note: in expansion of macro 'CORE_LOGF_X' + 8251 | CORE_LOGF_X(92, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9235,9 +9548,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' - 7046 | CORE_LOGF_X(61, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2533:9: note: in expansion of macro 'CORE_LOGF_X' + 2533 | CORE_LOGF_X(24, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9250,10 +9565,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' - 7056 | CORE_LOGF_X(62, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:960:13: note: in expansion of macro 'CORE_LOGF_X' + 960 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9266,12 +9580,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2533:9: note: in expansion of macro 'CORE_LOGF_X' - 2533 | CORE_LOGF_X(24, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:984:13: note: in expansion of macro 'CORE_LOGF_X' + 984 | CORE_LOGF_X(9, eLOG_Warning, + | ^~~~~~~~~~~ make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -9283,12 +9613,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' - 7225 | CORE_LOGF_X(63, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8288:9: note: in expansion of macro 'CORE_LOGF_X' + 8288 | CORE_LOGF_X(87, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9301,10 +9629,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' - 7266 | CORE_LOGF_X(64, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1201:13: note: in expansion of macro 'CORE_LOGF_X' + 1201 | CORE_LOGF_X(6, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9317,15 +9644,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' - 7308 | CORE_LOGF_X(65, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' + 1213 | CORE_LOGF_X(10, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9338,10 +9659,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' - 7318 | CORE_LOGF_X(66, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8295:9: note: in expansion of macro 'CORE_LOGF_X' + 8295 | CORE_LOGF_X(86, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9354,9 +9681,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' - 7352 | CORE_LOGF_X(125, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:148:13: note: in expansion of macro 'CORE_LOGF_X' + 148 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9369,9 +9696,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' - 7405 | CORE_LOGF_X(165, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:153:17: note: in expansion of macro 'CORE_LOGF_X' + 153 | CORE_LOGF_X(9, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9384,10 +9711,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' - 7422 | CORE_LOGF_X(166, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:167:17: note: in expansion of macro 'CORE_LOGF_X' + 167 | CORE_LOGF_X(11, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9400,13 +9726,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' - 7455 | CORE_LOGF_X(67, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8327:9: note: in expansion of macro 'CORE_LOGF_X' + 8327 | CORE_LOGF_X(98, eLOG_Error, | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] @@ -9421,8 +9744,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' - 7512 | CORE_LOGF_X(68, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:171:17: note: in expansion of macro 'CORE_LOGF_X' + 171 | CORE_LOGF_X(8, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9436,11 +9759,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' - 7539 | CORE_LOGF_X(69, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:188:13: note: in expansion of macro 'CORE_LOGF_X' + 188 | CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseCntl': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9453,11 +9775,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' - 7549 | CORE_LOGF_X(70, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:212:9: note: in expansion of macro 'CORE_LOGF_X' + 212 | CORE_LOGF_X(10, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9470,10 +9791,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' - 7568 | CORE_LOGF_X(71, eLOG_Warning, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:387:17: note: in expansion of macro 'CORE_LOGF_X' + 387 | CORE_LOGF_X(4, eLOG_Trace, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9486,15 +9806,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' - 7575 | CORE_LOGF_X(72, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' + 8334 | CORE_LOGF_X(97, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9507,13 +9821,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' - 7722 | CORE_LOGF_X(73, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8354:9: note: in expansion of macro 'CORE_LOGF_X' + 8354 | CORE_LOGF_X(99, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9526,9 +9837,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' - 7784 | CORE_LOGF_X(158, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' + 630 | CORE_LOGF_X(3, eLOG_Trace, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9541,26 +9854,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' - 7791 | CORE_LOGF_X(159, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1041:9: note: in expansion of macro 'CORE_LOGF_X' + 1041 | CORE_LOGF_X(2, eLOG_Error, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9573,8 +9870,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' - 7826 | CORE_LOGF_X(156, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8372:9: note: in expansion of macro 'CORE_LOGF_X' + 8372 | CORE_LOGF_X(101, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9588,25 +9885,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' - 7833 | CORE_LOGF_X(157, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1204:21: note: in expansion of macro 'CORE_LOGF_X' + 1204 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8379:9: note: in expansion of macro 'CORE_LOGF_X' + 8379 | CORE_LOGF_X(100, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9619,10 +9915,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8399:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPollCntl': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9635,19 +9931,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8017:9: note: in expansion of macro 'CORE_LOGF_X' - 8017 | CORE_LOGF_X(79, eLOG_Error, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1743:13: note: in expansion of macro 'CORE_LOGF_X' + 1743 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9660,9 +9949,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' - 8024 | CORE_LOGF_X(78, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2012:9: note: in expansion of macro 'CORE_LOGF_X' + 2012 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9675,8 +9966,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8042 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9684,16 +9975,19 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8058:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8058 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2088:17: note: in expansion of macro 'CORE_LOGF_X' + 2088 | CORE_LOGF_X(6, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9703,22 +9997,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8088:9: note: in expansion of macro 'CORE_LOGF_X' - 8088 | CORE_LOGF_X(82, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2417:9: note: in expansion of macro 'CORE_LOG' + 2417 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); + | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:36: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9728,21 +10027,52 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8095:9: note: in expansion of macro 'CORE_LOGF_X' - 8095 | CORE_LOGF_X(81, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8985:17: note: in expansion of macro 'CORE_LOG_X' + 8985 | CORE_LOG_X(164, + | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': @@ -9761,12 +10091,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:209:9: note: in expansion of macro 'CORE_LOGF_X' 209 | CORE_LOGF_X(5, eLOG_Error, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:39: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 'SERV_DISPD_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9783,6 +10107,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:443:9: note: in expansion of macro 'CORE_LOGF' 443 | CORE_LOGF(eLOG_Trace, | ^~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:39: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetHeapCopy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9795,10 +10138,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' - 8114 | CORE_LOGF_X(83, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:444:13: note: in expansion of macro 'CORE_LOGF_X' + 444 | CORE_LOGF_X(26, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9811,11 +10153,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8127:9: note: in expansion of macro 'CORE_LOGF_X' - 8127 | CORE_LOGF_X(84, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:455:17: note: in expansion of macro 'CORE_LOGF_X' + 455 | CORE_LOGF_X(27, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:461:17: note: in expansion of macro 'CORE_LOGF_X' + 461 | CORE_LOGF_X(28, eLOG_Error, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 's_Resolve': @@ -9846,6 +10201,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:469:13: note: in expansion of macro 'CORE_LOGF_X' + 469 | CORE_LOGF_X(29, again ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:176:9: note: in expansion of macro 'CORE_LOGF_X' 176 | CORE_LOGF_X(eLSub_TooLong, eLOG_Critical, | ^~~~~~~~~~~ @@ -9855,6 +10225,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:514:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 514 | CORE_LOGF_ERRNO_X(3, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -9891,6 +10276,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:534:9: note: in expansion of macro 'CORE_LOGF_X' + 534 | CORE_LOGF_X(4, retry ? eLOG_Error : eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:217:9: note: in expansion of macro 'CORE_LOGF_X' 217 | CORE_LOGF_X(eLSub_BadData, eLOG_Error, | ^~~~~~~~~~~ @@ -9910,6 +10310,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:244:9: note: in expansion of macro 'CORE_LOGF_X' 244 | CORE_LOGF_X(eLSub_Connect, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_LookupHost': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:576:13: note: in expansion of macro 'CORE_LOGF_X' + 576 | CORE_LOGF_X(30, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 'x_SetupFromNamerd': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9956,6 +10372,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:344:9: note: in expansion of macro 'CORE_LOGF_X' 344 | CORE_LOGF_X(eLSub_TooLong, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetNextInfo': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:696:51: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 696 | || SERV_EqualInfo(skip, &svc->info))) { + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 'x_SetupConnectionParams': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -10122,6 +10542,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:510:13: note: in expansion of macro 'CORE_LOGF_X' 510 | CORE_LOGF_X(eLSub_TooLong, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:699:45: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 699 | } else if (SERV_EqualInfo(skip, &svc->info)) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:850:31: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 850 | cand[n].cand.info = &svc->info; + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:938:37: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] + 938 | if ((info = SERV_CopyInfoEx(&svc->info, name)) != 0) { + | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 'SERV_LINKERD_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -10198,363 +10628,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:581:9: note: in expansion of macro 'CORE_LOGF_X' 581 | CORE_LOGF_X(eLSub_Message, eLOG_Trace, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8156:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8184:9: note: in expansion of macro 'CORE_LOGF_X' - 8184 | CORE_LOGF_X(96, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8191:9: note: in expansion of macro 'CORE_LOGF_X' - 8191 | CORE_LOGF_X(95, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8244:9: note: in expansion of macro 'CORE_LOGF_X' - 8244 | CORE_LOGF_X(93, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8251:9: note: in expansion of macro 'CORE_LOGF_X' - 8251 | CORE_LOGF_X(92, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8288:9: note: in expansion of macro 'CORE_LOGF_X' - 8288 | CORE_LOGF_X(87, eLOG_Error, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetHeapCopy': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:444:13: note: in expansion of macro 'CORE_LOGF_X' - 444 | CORE_LOGF_X(26, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:455:17: note: in expansion of macro 'CORE_LOGF_X' - 455 | CORE_LOGF_X(27, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:461:17: note: in expansion of macro 'CORE_LOGF_X' - 461 | CORE_LOGF_X(28, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:469:13: note: in expansion of macro 'CORE_LOGF_X' - 469 | CORE_LOGF_X(29, again ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:514:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 514 | CORE_LOGF_ERRNO_X(3, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:534:9: note: in expansion of macro 'CORE_LOGF_X' - 534 | CORE_LOGF_X(4, retry ? eLOG_Error : eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8295:9: note: in expansion of macro 'CORE_LOGF_X' - 8295 | CORE_LOGF_X(86, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8327:9: note: in expansion of macro 'CORE_LOGF_X' - 8327 | CORE_LOGF_X(98, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_LookupHost': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:576:13: note: in expansion of macro 'CORE_LOGF_X' - 576 | CORE_LOGF_X(30, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetNextInfo': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:696:51: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 696 | || SERV_EqualInfo(skip, &svc->info))) { - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:699:45: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 699 | } else if (SERV_EqualInfo(skip, &svc->info)) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:850:31: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 850 | cand[n].cand.info = &svc->info; - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' - 8334 | CORE_LOGF_X(97, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:938:37: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] - 938 | if ((info = SERV_CopyInfoEx(&svc->info, name)) != 0) { - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8354:9: note: in expansion of macro 'CORE_LOGF_X' - 8354 | CORE_LOGF_X(99, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8372:9: note: in expansion of macro 'CORE_LOGF_X' - 8372 | CORE_LOGF_X(101, eLOG_Error, - | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j12 --jobserver-auth=7,8 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8379:9: note: in expansion of macro 'CORE_LOGF_X' - 8379 | CORE_LOGF_X(100, eLOG_Error, - | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8399:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: @@ -10570,21 +10652,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8985:17: note: in expansion of macro 'CORE_LOG_X' - 8985 | CORE_LOG_X(164, - | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c: In function 'x_ParseExpires': @@ -10695,13 +10764,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:439:9: note: in expansion of macro 'CORE_LOGF_X' 439 | CORE_LOGF_X(eNSub_Json, eLOG_Error, | ^~~~~~~~~~~ -++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wal/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -10806,6 +10869,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:558:13: note: in expansion of macro 'CORE_LOGF_X' 558 | CORE_LOGF_X(eNSub_Json, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10971,6 +11037,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:700:13: note: in expansion of macro 'CORE_LOGF_X' 700 | CORE_LOGF_X(eNSub_BadData, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11335,6 +11404,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1294:9: note: in expansion of macro 'CORE_LOGF_X' 1294 | CORE_LOGF_X(eNSub_BadData, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11561,7 +11631,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1499:9: note: in expansion of macro 'CORE_LOGF_X' 1499 | CORE_LOGF_X(eNSub_BadData, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wal/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -11621,49 +11697,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' 1551 | CORE_LOGF_X(eNSub_Message, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c: In function 'xx_LoadLocalIPs': @@ -11804,6 +11858,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:342:5: note: in expansion of macro 'CORE_LOG' 342 | CORE_LOG(eLOG_Warning, "Using default local IPv4 specs"); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_DumpHdr': @@ -12114,6 +12195,12 @@ 527 | CORE_LOGF(eLOG_Warning, | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_UpdatePort': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:550:28: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'SSERV_Info *' [-Wformat=] 550 | ("LBDNS updating entry \"%s\" @%p with port: %hu", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -12272,6 +12359,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:657:13: note: in expansion of macro 'CORE_LOG' 657 | CORE_LOG(eLOG_Error, "DNS TXT RR RDATA overrun"); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12394,6 +12485,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:764:9: note: in expansion of macro 'CORE_LOG' 764 | CORE_LOG(eLOG_Error, "DNS CNAME RR cannot expand cname"); | ^~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12500,6 +12592,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:870:25: note: in expansion of macro 'CORE_LOG' 870 | CORE_LOG(eLOG_Warning, | ^~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_VerifyReply': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12780,6 +12876,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1233:17: note: in expansion of macro 'CORE_LOGF' 1233 | CORE_LOGF(eLOG_Note, | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'SERV_LBDNS_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12826,6 +12925,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1565:13: note: in expansion of macro 'CORE_LOG' 1565 | CORE_LOG(eLOG_Critical, | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12886,16 +12988,45 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1619:5: note: in expansion of macro 'CORE_LOGF' 1619 | CORE_LOGF(data->debug ? eLOG_Note : eLOG_Trace, | ^~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +cd serial/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectio.cpp -o objectio.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); @@ -12905,7 +13036,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -12913,10 +13043,24 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +l -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd cgi/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); @@ -12924,24 +13068,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here 1119 | string_len = strlen(string); | ^~~~~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); | ^ @@ -12950,7 +13087,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 135 | strncpy(output_string, string, n); @@ -12960,43 +13096,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here 140 | return parson_strndup(string, strlen(string)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -w -j12 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/remake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -l -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securimake[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13006,18 +13105,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/message.cpp -o message.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o @@ -13027,38 +13116,21 @@ /bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxlogging.so /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -cd util/xregexp/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -o lzo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zstd.cpp -o zstd.o @@ -13066,7 +13138,11 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bumake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13076,7 +13152,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13086,20 +13163,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -openmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeref.cpp -o typeref.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typemap.cpp -o typemap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps ty -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13108,7 +13179,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +shared.cpp -o sequtil_shared.o +/bin/rm -f libsequtil.so .libsequtil.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so +/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13118,8 +13197,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13129,16 +13207,30 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +openmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeref.cpp -o typeref.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typemap.cpp -o typemap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protectionmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -shared.cpp -o sequtil_shared.o -/bin/rm -f libsequtil.so .libsequtil.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsequtil.so -/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13147,7 +13239,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13166,13 +13268,7 @@ /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secu/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13182,7 +13278,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13192,7 +13288,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13202,7 +13298,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13218,7 +13314,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13228,39 +13324,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o -/bin/rm -f libgene_info.so .libgene_info.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so -/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:36: @@ -13304,19 +13378,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:911:5: note: in expansion of macro 'CORE_LOG_X' 911 | CORE_LOG_X(29, eLOG_Warning, "Unavailable feature GNUTLS"); | ^~~~~~~~~~ - -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberid.cpp -o memberid.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/item.cpp -o item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REE -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13324,7 +13386,13 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -peIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -13474,12 +13542,46 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:1003:9: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' 1003 | CORE_LOG_ERRNO_EXX(12, eLOG_Error, err, errbuf, | ^~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o +/bin/rm -f libgene_info.so .libgene_info.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so +/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o +/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so +/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ @@ -13533,6 +13635,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:94:17: note: in expansion of macro 'CORE_LOG_X' 94 | CORE_LOG_X(44, eLOG_Critical, | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13610,6 +13718,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:212:5: note: in expansion of macro 'CORE_LOGF_X' 212 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13619,55 +13728,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o -/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so -/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp: In static member function 'static void ncbi::CPrimitiveTypeFunctions::Skip(ncbi::CObjectIStream&, ncbi::TTypeInfo) [with T = long double]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: warning: 'data' may be used uninitialized [-Wmaybe-uninitialized] - 147 | in.SkipStd(data); - | ~~~~~~~~~~^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: note: by argument 2 of type 'const long double&' to 'void (ncbi::CObjectIStream::)(const long double&)' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:146:25: note: 'data' declared here - 146 | TObjectType data; - | ^~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps + -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberid.cpp -o memberid.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/item.cpp -o item.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REEmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13676,7 +13744,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13686,13 +13754,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13702,7 +13764,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13712,7 +13774,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13722,7 +13784,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13743,8 +13805,8 @@ /bin/ln -f libxhtml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxhtml.so /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13754,8 +13816,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp: In static member function 'static void ncbi::CPrimitiveTypeFunctions::Skip(ncbi::CObjectIStream&, ncbi::TTypeInfo) [with T = long double]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: warning: 'data' may be used uninitialized [-Wmaybe-uninitialized] + 147 | in.SkipStd(data); + | ~~~~~~~~~~^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: note: by argument 2 of type 'const long double&' to 'void (ncbi::CObjectIStream::)(const long double&)' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:146:25: note: 'data' declared here + 146 | TObjectType data; + | ^~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13764,8 +13834,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blastmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13774,7 +13850,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13784,7 +13860,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13794,7 +13870,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13804,16 +13880,10 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +-2.16.0+ds/c++/src/serial/objistr.cpp -o objistr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostr.cpp -o objostr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o @@ -13821,47 +13891,16 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serial.cpp -o serial.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-b/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -last+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standardantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-brity -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o +/bin/rm -f libxcgi.so .libxcgi.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so +/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +dantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o /bin/rm -f libxconnect.so .libxconnect.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_lbsmd.o ncbi_dispd.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread @@ -13871,14 +13910,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' cd algo/blast/core/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd connect/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd connect/ext/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13887,10 +13926,10 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' @@ -13903,14 +13942,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13921,7 +13960,12 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werr/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); | ^ @@ -14023,12 +14067,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:253:13: note: in expansion of macro 'CORE_LOG' 253 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Corrupt ciphertext"); | ^~~~~~~~ -or=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1365:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1365 | (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; | ^ @@ -14038,6 +14077,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c:1590:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1590 | ((T_MB_IdxEndSearchIndication)( | ^ +last+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/exception.cpp -o exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objhook.cpp -o objhook.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objlist.cpp -o objlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standar/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] + 3003 | Blast_ForbiddenRanges forbidden = {0,}; + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:559:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 559 | lut->scansub_callback = (void *)s_BlastAaScanSubject; @@ -14048,10 +14097,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:567:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 567 | lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] - 3003 | Blast_ForbiddenRanges forbidden = {0,}; - | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] 2236 | lookup->hash_callback = FNV_hash; @@ -14173,13 +14218,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 2705 | (TNaLookupHashFunction)lookup->hash_callback; | ^ -t_lookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_message.c -o blast_message.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_S/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 2978 | lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any; | ^ @@ -14196,7 +14235,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 3006 | return (void *)s_MBScanSubject_Any; | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': +t_lookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_message.c -o blast_message.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_S/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c:1330:13: warning: unused variable 'bytes_written' [-Wunused-variable] 1330 | int bytes_written = snprintf(buffer, DIM(buffer), | ^~~~~~~~~~~~~ @@ -14293,22 +14338,20 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 2190 | (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' OURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c -o blast_options.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Writy -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o -/bin/rm -f libxcgi.so .libxcgi.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so -/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 306 | else if (strcasecmp("mapper", program) == 0) | ^~ @@ -14320,37 +14363,49 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builath/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o /usr/bin/gcc -std=gnu18 -fgnu89-inline 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 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-I/build/reproducible-path/ncbi-blast+-2./build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c: In function 'Blast_ScoreBlkMatrixFill': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16d -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/buil/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c: In function 'Blast_ScoreBlkMatrixFill': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1645:17: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 1645 | strncpy(full_matrix_path, matrix_path, path_len); | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1638:35: note: length computed here 1638 | size_t path_len = strlen(matrix_path); | ^~~~~~~~~~~~~~~~~~~ -16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/pattern.c -o pattern.o +.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/pattern.c -o pattern.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:635:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 635 | localPattern[posIndex-1] = 1; + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:411:11: note: at offset -1 into destination object 'localPattern' of size 330 + 411 | Uint1 localPattern[PHI_MAX_PATTERN_LENGTH]; /*local variable to hold for each position whether + | ^~~~~~~~~~~~ +format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_program.c -o blast_program.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/split_query.c -o split_qu/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING | ^ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:33: @@ -14363,30 +14418,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:635:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 635 | localPattern[posIndex-1] = 1; - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:411:11: note: at offset -1 into destination object 'localPattern' of size 330 - 411 | Uint1 localPattern[PHI_MAX_PATTERN_LENGTH]; /*local variable to hold for each position whether - | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp: In member function 'virtual void ncbi::CDBLB_ServiceMapper::GetServerOptions(const std::string&, ncbi::IDBServiceMapper::TOptions*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:336:33: warning: taking address of packed member of 'SLBSM_HostLoad' may result in an unaligned pointer value [-Waddress-of-packed-member] 336 | HINFO_Status(hinfo, &load.status); | ^~~~~~~~~~~~ -format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_program.c -o blast_program.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/split_query.c -o split_query.o +ery.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o @@ -14409,7 +14445,15 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o /bin/rm -f libxconnext.so .libxconnext.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread +/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o +/bin/rm -f libxcompress.so .libxcompress.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so +/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +ild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnext.so /bin/ln -f .xconnext.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnext.dep @@ -14450,30 +14494,22 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridild/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o -/bin/rm -f libxcompress.so .libxcompress.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so -/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_uv_nghttp2.cpp -o ncbi_uv_nghttp2.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http2_session.cpp -o ncbi_http2_session.o /bin/rm -f libxxconnect2.a .libxxconnect2.a.stamp -ar cr libxxconnect2.a ncbi_uv_nghttp2.o ncbi_http2_session.o /bin/rm -f libxxconnect2.so .libxxconnect2.so.stamp +ar cr libxxconnect2.a ncbi_uv_nghttp2.o ncbi_http2_session.o /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lxncbi -luv -lnghttp2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxxconnect2.a /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxxconnect2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxxconnect2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxxconnect2.so /bin/ln -f .xxconnect2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xxconnect2-static.dep +/bin/ln -f libxxconnect2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxxconnect2.so /bin/ln -f .xxconnect2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xxconnect2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' d/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serializable.cpp -o serializable.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serialobject.cpp -o serialobject.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pathhook.cpp -o pathhook.o @@ -14515,18 +14551,18 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_key.cpp -o netschedule_key.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_expt.cpp -o -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o +/usr/bin/g -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/classstr.cpp -o classstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/enumstr.cpp -o enumstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/stlstr.cpp -o stlstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE 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/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id.cpp -o compound_id.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-maPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o -/bin/rm -f libxconnserv.so .libxconnserv.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so -/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/refix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorageobjectloc.cpp -o netstorageobjectloc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorageobjectinfo.cpp -o netstorageobjectinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorage_direct_nc.cpp -o netstorage_direct_nc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/ns_output_parser.cpp -o ns_output_parser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/ns_job_serializer.cpp -o ns_job_serializer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id.cpp -o compound_id.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-madpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -14592,52 +14619,48 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' cd objects/general/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/biblio/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/medline/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/pub/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objects/biblio/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqset/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objects/medline/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/pub/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all +cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all +cd objects/seq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/scoremat/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd objects/seqset/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all +cd objects/scoremat/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd objects/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastdb all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blast all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastdb all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' @@ -14647,8 +14670,6 @@ make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -w -j12 --jobserver-auth=9,10 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -14656,19 +14677,7 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ - -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -14680,16 +14689,19 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ - -oc general -or objects/general -odi -od general.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ + -oc biblio -or objects/biblio -odi -od biblio.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -14699,114 +14711,72 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ - -oc blast -or objects/blast -odi -od blast.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ + -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqcode.asn -M "" -oA \ - -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ + -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ - -oc biblio -or objects/biblio -odi -od biblio.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ + -oc general -or objects/general -odi -od general.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ - -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqcode.asn -M "" -oA \ + -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ - -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ - -datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -14816,151 +14786,179 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ + -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ - -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ + -oc blast -or objects/blast -odi -od blast.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. +p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o +/bin/rm -f libxconnserv.so .libxconnserv.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so +/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. +Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' status=0 ; \ MAKE="/usr/bin/make -w -j12 --jobserver-auth=12,14"; \ @@ -14991,27 +14989,65 @@ -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump \ datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ + -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -2.16.0+ds/c++/src/objects/seqblock' /usr/bin/make -w -j12 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src @@ -15034,74 +15070,61 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' /usr/bin/make -w -j12 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbmake[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' cd objects/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all -cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all cd objects/pubmed/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/efetch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +.make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -./usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ - -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. + +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 1128819 (make_asn) /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15114,7 +15137,15 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ + -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ + +datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' File blastxml.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -15126,22 +15157,6 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' - -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 3623532 (make_asn) -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15151,7 +15166,24 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ + -oc id2 -or objects/id2 -odi -od id2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15161,32 +15193,17 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' File blastxml2.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' @@ -15197,33 +15214,50 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ - -oc id2 -or objects/id2 -odi -od id2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump \ - -datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -15235,88 +15269,118 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objtools/eutils/efetch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' /usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15326,117 +15390,115 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +File efetch.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ + -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' @@ -15447,14 +15509,20 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' i-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15474,38 +15542,9 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all -File efetch.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ - -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15515,7 +15554,6 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' @@ -15525,8 +15563,6 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' /usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -15538,74 +15574,59 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd egquery all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all +cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/eutils/espell/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/eutils/esummary/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all -cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -File ehistory.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ - -oc ehistory -or objtools/eutils/ehistory -odi -od ehistory.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd ehistory.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' File egquery.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=egquery MODULE_PATH=objtools/eutils/egquery MODULE_ASN=egquery.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' @@ -15616,47 +15637,45 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' -File einfo.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m einfo.dtd -M "" -oA \ - -oc einfo -or objtools/eutils/einfo -odi -od einfo.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd einfo.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +File einfo.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m einfo.dtd -M "" -oA \ + -oc einfo -or objtools/eutils/einfo -odi -od einfo.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd einfo.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +File ehistory.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ + -oc ehistory -or objtools/eutils/ehistory -odi -od ehistory.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd ehistory.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. File epost.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -15668,13 +15687,21 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' +File elink.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ + -oc elink -or objtools/eutils/elink -odi -od elink.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd elink.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. File espell.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' @@ -15685,24 +15712,19 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +File esearch.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ + -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -15712,46 +15734,17 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. -File elink.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ - -oc elink -or objtools/eutils/elink -odi -od elink.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd elink.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -File esearch.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ - -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. File esummary.module not found. Using defaults... /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all @@ -15763,190 +15756,233 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -File uilist.module not found. Using defaults... -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ - -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' /usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all +/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ - -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +File uilist.module not found. Using defaults... +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ + -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ + -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j12 --jobserver-auth=7,8 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' @@ -15986,118 +16022,98 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/valid/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' cd objects/general/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' cd objects/seqcode/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all cd objects/blastxml/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/blastxml2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' cd objtools/eutils/egquery/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objtools/eutils/ehistory/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j12 --jobserver-auth=7,8 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ - -oc valid -or objects/valid -odi -od valid.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +cd objtools/eutils/einfo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -16107,12 +16123,21 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ @@ -16122,61 +16147,67 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j12 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j12 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ + -oc valid -or objects/valid -odi -od valid.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +cd objtools/eutils/elink/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' /usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16184,24 +16215,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 flag-stamps /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' @@ -16214,23 +16238,38 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +cd objects/entrez2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' cd objtools/eutils/epost/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/eutils/espell/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +cd objtools/eutils/esearch/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +cd objtools/eutils/espell/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16238,16 +16277,13 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' @@ -16271,6 +16307,27 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o +/bin/rm -f libblastxml.so .libblastxml.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblastxml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastxml.so +/bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo__.cpp -o einfo__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o @@ -16281,17 +16338,15 @@ /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -cd objtools/eutils/uilist/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o @@ -16302,15 +16357,6 @@ /bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objects/gbseq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' @@ -16323,26 +16369,6 @@ /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o -/bin/rm -f libblastxml.so .libblastxml.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblastxml.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastxml.so -/bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o -/bin/rm -f libblastxml2.so .libblastxml2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblastxml2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastxml2.so -/bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell__.cpp -o espell__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o @@ -16363,6 +16389,16 @@ /bin/ln -f .epost.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o +/bin/rm -f libblastxml2.so .libblastxml2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblastxml2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastxml2.so +/bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch__.cpp -o esearch__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o @@ -16383,16 +16419,6 @@ /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist__.cpp -o uilist__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o -/bin/rm -f libuilist.so .libuilist.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libuilist.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC uilist__.o uilist___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libuilist.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libuilist.so -/bin/ln -f .uilist.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.uilist.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o @@ -16408,6 +16434,22 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist__.cpp -o uilist__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o +/bin/rm -f libuilist.so .libuilist.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libuilist.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC uilist__.o uilist___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libuilist.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libuilist.so +/bin/ln -f .uilist.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.uilist.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink__.cpp -o elink__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o @@ -16417,10 +16459,6 @@ /bin/ln -f libelink.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libelink.so /bin/ln -f .elink.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' cd objtools/eutils/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' @@ -16428,11 +16466,9 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' @@ -16442,10 +16478,16 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esearch.cpp -o esearch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/egquery.cpp -o egquery.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o -/usr/bin/g+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] - 133 | catch (CSerialException) { - | ^~~~~~~~~~~~~~~~ +/usr/bin/g+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o +/bin/rm -f libgbseq.so .libgbseq.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so +/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general__.cpp -o general__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general___.cpp -o general___.o @@ -16466,29 +16508,33 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o -/bin/rm -f libgbseq.so .libgbseq.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so -/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] + 133 | catch (CSerialException) { + | ^~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o +/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so +/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' + -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o @@ -16500,16 +16546,6 @@ /bin/ln -f .eutils.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.eutils.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o -/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so -/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid___.cpp -o valid___.o @@ -16539,18 +16575,18 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' @@ -16579,20 +16615,20 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' @@ -16627,25 +16663,25 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' cd objects/seq/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null -cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/mla/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' @@ -16705,11 +16741,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1893:52: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1893 | for (CDense_seg::TNumseg i = 0; i < ds.GetLens().size(); | ~~^~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 157 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, from seqfeat__.cpp:1: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': @@ -16720,26 +16751,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here - 173 | s_ToUpper(fore_name); - | ~~~~~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here - 631 | s_ToLower(databank_name); - | ~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla__.cpp -o mla__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla___.cpp -o mla___.o @@ -16761,6 +16772,31 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 157 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here + 173 | s_ToUpper(fore_name); + | ~~~~~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here + 631 | s_ToLower(databank_name); + | ~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp: In function 'ncbi::objects::CCountries::EStateCleanup ncbi::objects::s_DoUSAStateCleanup(std::string&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp:4598:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] @@ -16845,65 +16881,65 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' cd objects/seqset/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null -cd objects/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null -cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null -cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/genomecoll/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/variation/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/taxon1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon3/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -16936,59 +16972,59 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' cd objects/scoremat/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/seqedit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/seqsplit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/submit/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objects/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o @@ -17001,15 +17037,6 @@ /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o -/bin/rm -f libvariation.so .libvariation.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvariation.so -/bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.variation.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o @@ -17017,15 +17044,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o -/bin/rm -f libtaxon1.so .libtaxon1make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon1.so -/bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +/bin/rm -f libtaxon1.so .libtaxon1make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp @@ -17035,6 +17054,23 @@ /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o +/bin/rm -f libvariation.so .libvariation.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libvariation.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvariation.so +/bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.variation.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon1.so +/bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit___.cpp -o submit___.o @@ -17068,17 +17104,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o -/bin/rm -f libid1.so .libid1.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so -/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.so .libscoremat.so.stamp @@ -17099,6 +17125,20 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o +/bin/rm -f libid1.so .libid1.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so +/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] + 1708 | if (code < CODE_Last) { + | ~~~~~^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:58:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); @@ -17114,10 +17154,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here 52 | void AgpRead(CNcbiIstream& is, | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] - 1708 | if (code < CODE_Last) { - | ~~~~~^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 585 | catch(CException e){ @@ -17128,7 +17164,27 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o +/bin/rm -f libseqedit.so .libseqedit.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqedit.so +/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 56 | if ((orderedIds.size() > idCount) && + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ +DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.so .libseqsplit.so.stamp @@ -17138,38 +17194,28 @@ /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null cd objects/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o -/bin/rm -f libseqedit.so .libseqedit.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqedit.so -/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -cd objmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o @@ -17177,10 +17223,26 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o -/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 56 | if ((orderedIds.size() > idCount) && - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ +/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] + 409 | for (int i=0; i< numDeflines; ++i) { + | ~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(TNumrow, ncbi::TSeqPos, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:461:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 461 | if (row > m_MiddleSections.size()) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_AssignDensegIds(TFastaFlags, ncbi::objects::CDense_seg&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { + | ~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 92 | for (auto i=0; i < mSequences.size(); ++i) { + | ~~^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'bool ncbi::objects::CAlnScanner::xSeqIdIsEqualToInfoAt(const std::string&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 233 | if (index >= mSeqIds.size()) { + | ~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 137 | if (lineCount < sample.size()) { @@ -17203,13 +17265,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:295:22: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 295 | return (dataSize == (endOffset - startOffset + 1)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:296:27: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 296 | if (currentLineLength != blockLineLength) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ @@ -17219,33 +17275,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/graph_ci.cpp -o graph_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -sp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] - 409 | for (int i=0; i< numDeflines; ++i) { - | ~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(TNumrow, ncbi::TSeqPos, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:461:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 461 | if (row > m_MiddleSections.size()) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_AssignDensegIds(TFastaFlags, ncbi::objects::CDense_seg&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { - | ~~^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 92 | for (auto i=0; i < mSequences.size(); ++i) { - | ~~^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'bool ncbi::objects::CAlnScanner::xSeqIdIsEqualToInfoAt(const std::string&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 233 | if (index >= mSeqIds.size()) { - | ~~~~~~^~~~~~~~~~~~~~~~~ -rotector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o -/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -sp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 129 | if (dataLineCount < mSequenceCount) { // in first block | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ @@ -17253,7 +17283,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 210 | if (mSequenceCount != mSeqIds.size()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +rotector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o +/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:75:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 75 | if (lineInBlock != mSeqIds.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ @@ -17288,13 +17324,44 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info.cpp -o tse_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security s/readers/reader_base.cpp -o reader_base.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOUmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOU/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1279 | } catch( CStringException ) { + | ^~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o +/bin/rm -f libid2.so .libid2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2.so +/bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/names.cpp -o names.o @@ -17304,83 +17371,58 @@ /bin/ln -f libxnetblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblast.so /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -s/readers/reader_base.cpp -o reader_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-localmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' cd objects/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o -/bin/rm -f libid2.so .libid2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2.so -/bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1279 | } catch( CStringException ) { - | ^~~~~~~~~~~~~~~~ -RCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o +-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-paRCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o @@ -17396,6 +17438,22 @@ /bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] + 832 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:921:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] + 921 | for (auto i=0; i)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:1006:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] + 1006 | for (auto i=0; i >&, bool, std::vector&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] - 832 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:921:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] - 921 | for (auto i=0; i)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:1006:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] - 1006 | for (auto i=0; i::size_type' {aka 'long unsigned int'} [-Wsign-compare] 144 | if (mBlockCount != mBlockSizes.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ @@ -17455,10 +17491,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 156 | if (mBlockCount != mBlockStartsT.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp: In member function 'virtual void ncbi::objects::CVcfReader::xSetFileFormat(const std::string&, ncbi::objects::CSeq_annot&, bool&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp:332:27: warning: catching polymorphic type 'class std::exception' by value [-Wcatch-value=] - 332 | catch (std::exception except) { - | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:484:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 484 | if (blockSizes.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 505 | if (blockStarts.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ ucible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o @@ -17466,44 +17505,22 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o -/usr/bith/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_reader.cpp -o psl_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql.cpp -o bed_autosql.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_standard.cpp -o bed_autosql_standard.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:484:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 484 | if (blockSizes.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 505 | if (blockStarts.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-patSOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o +/usr/biSOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_column_data.cpp -o bed_column_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp: In function 'ncbi::CRef ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 802 | true)); - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o -/bin/rm -f libblast_services.so .libblast_services.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_services.so -/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_services.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o +/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp +ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a +/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o @@ -17536,6 +17553,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:944:42: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 944 | for (int i=num_fwd_primer_info; i ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 802 | true)); + | ^ h/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range.cpp -o handle_range.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o @@ -17551,7 +17587,13 @@ /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +tection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSEmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.so .libpsg_client.so.stamp @@ -17560,26 +17602,14 @@ /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libpsg_client.so /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -tection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSEmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' T_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bcbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/cbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/message_listener.cpp -o message_listener.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.so .libxobjread.so.stamp @@ -17589,7 +17619,13 @@ /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o +build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/edit_saver.cpp -o edit_saver.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o @@ -17615,9 +17651,9 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/segmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd objmgr/split/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' @@ -17626,59 +17662,65 @@ make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_blob.cpp -o split_blob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/nmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o @@ -17691,28 +17733,26 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wni-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wnmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_blob.cpp -o split_blob.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ni-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 51 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 612 | } catch (CException) { + | ^~~~~~~~~~ cbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/id_range.cpp -o id_range.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o @@ -17720,22 +17760,22 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/size.cpp -o size.o -/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:256:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] - 256 | catch(std::bad_alloc) { - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': +/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:972:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] 972 | int found_short(-1); | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 612 | } catch (CException) { - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:256:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] + 256 | catch(std::bad_alloc) { + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryTaxIdList(const char*, const char*, CSeqDBGiList::STaxIdsOids&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) | ~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] + 363 | } catch (CObjmgrUtilException) { + | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp: In function 'std::string ncbi::objects::{anonymous}::sx_ErrorSeqIds(ncbi::objects::CReaderRequestResult&, const std::vector&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1155:37: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1155 | if (++total > kMaxErrorSeqIds) continue; @@ -17743,34 +17783,32 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1162:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1162 | if (total > kMaxErrorSeqIds) { | ~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': +o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1542:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 1542 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] - 363 | } catch (CObjmgrUtilException) { - | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::x_GetSequence(int, const char**) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1785:24: warning: comparing the result of pointer addition '((* buffer) + -1)' and NULL [-Waddress] 1785 | if (! (*buffer - 1)) return -1; | ~~~~~~~~~^~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o +/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so +/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2998:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable] 2998 | TIndx map_end = 0; | ^~~~~~~ -o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here - 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] - 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o /bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp @@ -17780,18 +17818,13 @@ /bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgosegmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o -/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so -/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] - 1114 | static bool s_IsValidAccession(const string& acc) - | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here + 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] + 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, TS2PFlags, ncbi::objects::CScope*, int*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:814:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 814 | } catch (CObjmgrUtilException) { @@ -17807,10 +17840,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4763:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 4763 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 2436 | if (offset > 0 && offset < m_MainTitle.length()) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In instantiation of 'void ncbi::objects::x_Translate(const Container&, std::string&, int, const CGenetic_code*, bool, bool, bool, bool, bool*) [with Container = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4103:16: required from here 4103 | x_Translate(seq, prot, 0, code, @@ -17829,6 +17858,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:3647:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 3647 | const size_t usable_size = seq.size() > frame ? seq.size() - frame : 0; | ~~~~~~~~~~~^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 2436 | if (offset > 0 && offset < m_MainTitle.length()) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] + 1114 | static bool s_IsValidAccession(const string& acc) + | ^~~~~~~~~~~~~~~~~~ DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o @@ -17890,15 +17926,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/tax4blastsqlite.cpp -o tax4blastsqlite.o /bin/rm -f libseqdb.so .libseqdb.so.stamp -/usr/bin/g++ in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o -/bin/rm -f libid2_split.so .libid2_split.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2_split.so -/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2_split.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' - -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread +/usr/bin/g++ -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqdb.so /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqdb.dep @@ -17908,8 +17936,8 @@ cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -17922,17 +17950,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -17949,12 +17977,20 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o +/bin/rm -f libid2_split.so .libid2_split.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2_split.so +/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2_split.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp -ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp +ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.a @@ -17965,38 +18001,38 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp: In member function 'void ncbi::CWriteDB_LMDB::x_CommitTransaction()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:295:55: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 295 | unsigned int num_threads = GetCpuCount(); @@ -18006,6 +18042,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 1538 | const string& driver_name = + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' + 1539 | SPluginParams::SetDefaultValue(params, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ + 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1541 | "bdb"); + | ~~~~~~ ile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o @@ -18017,53 +18064,53 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' cd objtools/seqmasks_io/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/dbindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd algo/blast/dbindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd objtools/alnmgr/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18071,37 +18118,57 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/rep/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 1538 | const string& driver_name = - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' - 1539 | SPluginParams::SetDefaultValue(params, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ - 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1541 | "bdb"); - | ~~~~~~ -ag.cpp -o alndiag.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/repmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/builmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/builmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here + 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here + 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o @@ -18112,7 +18179,7 @@ /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' @@ -18121,29 +18188,62 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 76 | match1->m_ChainScore == match2->m_ChainScore && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 77 | match1->m_Score > match2->m_Score || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, TAddFlags)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 192 | (aln_seq1->m_StrandScore > 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 193 | strand1 == eNa_strand_minus || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 196 | aln_seq2->m_StrandScore > 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 197 | strand2 == eNa_strand_minus || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 198 | aln_seq2->m_StrandScore < 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 199 | strand2 != eNa_strand_minus)) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] + 306 | unsigned long tmp; + | ^~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o +/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp +ar cr libncbi_xreader_id2.a reader_id2.o +/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a +/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so +/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] @@ -18182,41 +18282,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here - 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here - 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 76 | match1->m_ChainScore == match2->m_ChainScore && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 77 | match1->m_Score > match2->m_Score || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, TAddFlags)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 192 | (aln_seq1->m_StrandScore > 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 193 | strand1 == eNa_strand_minus || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 196 | aln_seq2->m_StrandScore > 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 197 | strand2 == eNa_strand_minus || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 198 | aln_seq2->m_StrandScore < 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 199 | strand2 != eNa_strand_minus)) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:66, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, @@ -18239,28 +18304,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] - 306 | unsigned long tmp; - | ^~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 658 | string idstr = objects::sequence::GetTitle( bsh ); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here - 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ -d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pr/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 311 | if (plus && prev_start_plus_len < start || - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o @@ -18268,73 +18311,42 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o /bin/rm -f libwritedb.so .libwritedb.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libwritedb.so /bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j12 --jobserver-auth=7,8 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o -/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp -ar cr libncbi_xreader_id2.a reader_id2.o -/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a -/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so -/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 658 | string idstr = objects::sequence::GetTitle( bsh ); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here + 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 311 | if (plus && prev_start_plus_len < start || + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' @@ -18343,15 +18355,6 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] - 691 | second_row_fits != eIgnoreMatch) { - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here - 155 | TSecondRowFits second_row_fits; - | ^~~~~~~~~~~~~~~ roducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o @@ -18363,40 +18366,22 @@ /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp -/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp ar cr libncbi_xreader_id1.a reader_id1.o +/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a @@ -18405,39 +18390,104 @@ /bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.so /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] + 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here + 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); + | ^~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_services_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o -/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o -/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pr/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] + 691 | second_row_fits != eIgnoreMatch) { + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here + 155 | TSecondRowFits second_row_fits; + | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o +/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp +ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o +/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a +/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so +/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so -/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd algo/winmask/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18447,7 +18497,14 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o +/usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o +/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o @@ -18461,37 +18518,30 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/inc/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] - 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here - 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o -/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp -ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a -/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -/c++/BUILD/lib/libncbi_xreader_cache.so -/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/incmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so +/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18503,6 +18553,10 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o @@ -18515,24 +18569,6 @@ /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18544,6 +18580,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' lude /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o @@ -18556,13 +18599,23 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o +/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so +/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/alnmgr/sparse_aln.hpp:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:34: In member function 'ncbi::CAlignRangeCollExtender::position_type ncbi::CAlignRangeCollExtender::GetSecondFrom() const [with TColl = ncbi::CAlignRangeCollectionList >]', @@ -18588,24 +18641,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o -/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so -/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); | ^ @@ -18769,6 +18805,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' otector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o @@ -18781,14 +18825,6 @@ /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makembindex -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] 130 | string id_str = sequence::GetTitle( bsh ); @@ -18871,11 +18907,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-bl/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-bl/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'bool ncbi::blast::CRemoteBlast::LoadFromArchive()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:1660:19: warning: ignoring return value of 'bool std::vector<_Tp, _Alloc>::empty() const [with _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]', declared with attribute 'nodiscard' [-Wunused-result] 1660 | m_Errs.empty(); | ~~~~~~~~~~~~^~ @@ -18893,21 +18925,19 @@ /usr/include/c++/14/bits/stl_vector.h:1090:7: note: declared here 1090 | empty() const _GLIBCXX_NOEXCEPT | ^~~~~ -ast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp -ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o /bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp +ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a @@ -18918,44 +18948,44 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/align_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/simple/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/dustmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/winmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18967,7 +18997,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/tabular.cpp -o tabular.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reprodmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reprodast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp -o efetch__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o /bin/rm -f libefetch.so .libefetch.so.stamp @@ -18999,19 +19035,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:20: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] - 125 | reader.Read(false, true); - | ~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:42: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/aln_reader.hpp:215:10: note: declared here - 215 | void Read( - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] - 376 | while (k < m_Msa->dimensions->query_length && - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -19023,6 +19047,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:20: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] + 125 | reader.Read(false, true); + | ~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:42: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/aln_reader.hpp:215:10: note: declared here + 215 | void Read( + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] + 376 | while (k < m_Msa->dimensions->query_length && + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:44: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); @@ -19030,13 +19066,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, | ^~~~ -_advprot_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/version.cpp -o version.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp:448:35: warning: unused variable 'da' [-Wunused-variable] + 448 | const CSeq_align& da = *x_OrigAlignsById[*di]; + | ^~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_unit_test @@ -19044,11 +19078,23 @@ /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp:448:35: warning: unused variable 'da' [-Wunused-variable] - 448 | const CSeq_align& da = *x_OrigAlignsById[*di]; - | ^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o +/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC simple_om.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjsimple.so +/bin/ln -f .xobjsimple.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjsimple.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +-o apply_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wn/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] 224 | CCdregion_translate::TranslateCdregion(data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ @@ -19068,40 +19114,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp:810:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 810 | for(auto i=0; i ncbi::blast::CRemoteBlast::GetResultSet()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o windowmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': +_advprot_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/version.cpp -o version.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { | ~~~~~~^~~~~~~~~~~~~~ @@ -19129,6 +19152,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] 2881 | if (pos >= start && pos < start + len) { | ~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CRemoteBlast::GetResultSet()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); + | ^ o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o @@ -19149,17 +19176,15 @@ /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/dustmasker make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp: In constructor 'ncbi::blast::CBlastAncillaryData::CBlastAncillaryData(std::pair, std::pair, std::pair, Int8, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp:117:1: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 117 | CBlastAncillaryData::CBlastAncillaryData(pair lambda, - | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o windowmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const std::string&, const std::string&, ncbi::SIZE_TYPE, bool, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:25: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); @@ -19170,6 +19195,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, | ^~~~ +pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 259 | for (int j = i + 1; j < spans.size(); j++) + | ~~^~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); @@ -19183,23 +19218,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 259 | for (int j = i + 1; j < spans.size(); j++) - | ~~^~~~~~~~~~~~~~ /c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/query_data.cpp -o query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp: In constructor 'ncbi::blast::CBlastAncillaryData::CBlastAncillaryData(std::pair, std::pair, std::pair, Int8, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp:117:1: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 117 | CBlastAncillaryData::CBlastAncillaryData(pair lambda, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o @@ -19221,16 +19257,40 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/pub_fix.cpp -o pub_fix.o /bin/rm -f libxobjedit.so .libxobjedit.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 148 | tmp_pair, 0)); - | ^ +/usr/bin/g++ -std=gnu++17 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_utils.o ucible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o +/bin/rm -f libalign_format.so .libalign_format.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libalign_format.so +/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.align_format.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lxlogging -leutils -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjedit.so /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-pathmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' cd objtools/cleanup/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19254,27 +19314,55 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blasNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 148 | tmp_pair, 0)); + | ^ +NCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.so .libxblast.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/usr/bin/g++ -std=gnu++17 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/r/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +eproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxblast.so /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' cd algo/blast/proteinkmer/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o @@ -19282,46 +19370,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/bucible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o -/bin/rm -f libalign_format.so .libalign_format.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libalign_format.so -/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.align_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd algo/blast/blastinput/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-pathmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/bmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o @@ -19333,19 +19382,10 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:398:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 398 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:404:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 404 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:410:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 410 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:416:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 416 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:25: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 77 | if (hits.size() < numHashes) @@ -19354,21 +19394,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:806:38: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 806 | if (last_oid == *i) | ~~~~~~~~~^~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2875:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2875 | if (abs((long int)this_start - (long int)prev_end) < min_len) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ _LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbrancuild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranc/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ +/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp @@ -19379,59 +19421,63 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' cd algo/blast/igblast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19439,11 +19485,11 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19452,27 +19498,34 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19495,58 +19548,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ -/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastdiag_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] - 759 | Int4 query_length = query_blk->length; - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] - 760 | Int4 subject_length = subject_blk->length; - | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:47: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] @@ -19635,6 +19636,41 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] + 759 | Int4 query_length = query_blk->length; + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] + 760 | Int4 subject_length = subject_blk->length; + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastdiag_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. h-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o @@ -19658,50 +19694,48 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blasthits_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastengine_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastextend_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastextend_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aalookup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19709,13 +19743,15 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aalookup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aascan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -19730,50 +19766,48 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o aascan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastengine_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blasthits_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o -/bin/rm -f libigblast.so .libigblast.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libigblast.so -/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o proteinkmer_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19785,13 +19819,15 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o +/bin/rm -f libigblast.so .libigblast.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libigblast.so +/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19804,10 +19840,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_culling_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_besthit_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -19822,10 +19858,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_besthit_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastoptions_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -19838,41 +19874,41 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o gencode_singleton_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o hspfilter_culling_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blastoptions_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastoptions_unit_test +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o gencode_singleton_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19884,18 +19920,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -t+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o -/bin/rm -f libxcleanup.so .libxcleanup.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so -/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19904,15 +19928,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o @@ -19921,7 +19937,7 @@ /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/msa2pssm_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19930,7 +19946,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o @@ -19939,6 +19955,26 @@ /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +t+-2.16.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/influenza_set.cpp -o influenza_set.o +/bin/rm -f libxcleanup.so .libxcleanup.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o influenza_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre2-8 +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcleanup.so +/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19966,18 +20002,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntlookup_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20003,13 +20039,13 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_iteration_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20023,10 +20059,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntscan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o phiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20038,31 +20074,31 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmenginefreqratios_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o ntscan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psibl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20075,15 +20111,15 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_iteration_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psibl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20095,10 +20131,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o prelimsearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmenginefreqratios_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20116,11 +20152,9 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20132,16 +20166,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o pssmcreate_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j12 --jobserver-auth=7,8 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20151,10 +20187,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20166,18 +20202,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o optionshandle_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20185,17 +20221,17 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o queryinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o querydata_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20205,10 +20241,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o querydata_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rmblast_traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20223,10 +20259,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rps_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20239,17 +20275,17 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o scoreblk_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqinfosrc_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20259,6 +20295,24 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o rps_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o @@ -20270,25 +20324,9 @@ /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/stat_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqinfosrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/segmasker/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' @@ -20296,8 +20334,6 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. algoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o seqsrc_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20322,6 +20358,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/dbsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o search_strategy_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o setupfactory_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20335,27 +20378,6 @@ /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/subj_ranges_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o search_strategy_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o remote_blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/remote_blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' ource_item.cpp -o dbsource_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o @@ -20364,30 +20386,30 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-ymake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o tracebacksearch_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tracebacksearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o version_reference_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/version_reference_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp -o source_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/version_item.cpp -o version_item.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path//build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const std::string& ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/feature_item.cpp:2135:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2135 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o convert2blastmask /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20395,24 +20417,24 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o version_reference_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/version_reference_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:300:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 300 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:301:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 301 | if (this_start < (15 + last_stop) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o segmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/segmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o remote_blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/remote_blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20422,10 +20444,24 @@ /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:300:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 300 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/primary_item.cpp:301:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 301 | if (this_start < (15 + last_stop) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/source_item.cpp:346:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] 346 | if ( genome >= s_organelle_prefix_size ) { | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o split_query_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o @@ -20449,17 +20485,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:84: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::CFeatureIndex::GetMappedFeat() const().ncbi::objects::CMappedFeat::GetOriginalFeature()' 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] + 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) + | ^~~~~~~~~~~ -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] - 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) | ^~~~~~~~~~~~~~~~~ -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o @@ -20549,6 +20585,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 122 | if (m_ResultsMap.size() != currNum) + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] @@ -20569,10 +20609,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 122 | if (m_ResultsMap.size() != currNum) - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ oducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o @@ -20586,12 +20622,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20599,120 +20637,118 @@ make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -w -j12 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20748,6 +20784,20 @@ /usr/include/c++/14/bits/stl_vector.h:1211:7: note: declared here 1211 | front() _GLIBCXX_NOEXCEPT | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp: In member function 'virtual int CBlastnApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 148 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 159 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 148 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 159 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o blast_unit_test @@ -20766,25 +20816,11 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 148 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 159 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp: In member function 'virtual int CBlastnApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 148 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 159 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o magicblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20798,13 +20834,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I../ -DNCBI_APP_BUILT_AS=bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bdbloader_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bdbloader_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20816,13 +20852,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o delta_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I../ -DNCBI_APP_BUILT_AS=bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bdbloader_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bdbloader_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20835,10 +20871,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o magicblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o redoalignment_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -20852,13 +20888,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -20895,43 +20932,42 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o psiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -w -j12 --jobserver-auth=7,8 all /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_formatter @@ -20969,13 +21005,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 143 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 154 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast @@ -20994,12 +21023,19 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 143 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 154 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -21014,10 +21050,10 @@ /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null @@ -21031,13 +21067,14 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpstblastn_node.o rpstblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpstblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -21049,14 +21086,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j12 --jobserver-auth=7,8 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_convert +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -21067,14 +21103,14 @@ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -w -j12 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j12 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. @@ -21084,6 +21120,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx @@ -21091,21 +21129,11 @@ /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j12 --jobserver-auth=7,8 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_convert -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21122,6 +21150,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:1213:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1213 | CRef m = m_BlastDb->GetDBMetaData(output_prefix); | ^~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp: In member function 'void CMakeProfileDBApp::x_InitRPSDbInfo(CRPS_DbInfo&, Int4, Int4)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:768:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 768 | if (!rpsDbInfo.aux_file.is_open()) @@ -21138,20 +21174,6 @@ 565 | bool success = m_DB->EndBuild(); | ^~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcheck -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcheck -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxconnext -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcp /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -21159,6 +21181,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcheck +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcheck +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcmd /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -21179,6 +21208,13 @@ /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeclusterdb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lm -lpthread -o bl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o @@ -23005,8 +23041,8 @@ Testing, please wait... -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: 331: ulimit: error setting limit (Operation not permitted) -OK -- [serial/datatool] datatool.sh (real 0.52, user 0.35, sys 0.17) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: line 331: ulimit: core file size: cannot modify limit: Operation not permitted +OK -- [serial/datatool] datatool.sh (real 2.27, user 0.29, sys 0.03) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ @@ -23025,17 +23061,17 @@ DIS -- [objtools/blast/seqdb_reader/test] get_blastdb_metadata DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_unit_test DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_lmdb_unit_test -OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.04, user 0.02, sys 0.02) +OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.20, user 0.01, sys 0.01) DIS -- [objtools/blast/blastdb_format/unit_test] blastdb_format_unit_test ABS -- [objtools/pubseq_gateway/client/test] test_psg_client_impl DIS -- [objtools/align_format/unit_test] align_format_unit_test -OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 4.04, user 3.13, sys 0.91) +OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 4.33, user 3.15, sys 0.82) DIS -- [algo/blast/blastinput/unit_test] blastinput_unit_test DIS -- [algo/blast/unit_tests/blast_format] blast_format_unit_test DIS -- [algo/blast/unit_tests/blastdb] bdbloader_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_lmdb_unit_test -OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.07, user 0.05, sys 0.02) +OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.25, user 0.03, sys 0.01) DIS -- [algo/blast/unit_tests/api] blast_unit_test DIS -- [algo/blast/unit_tests/api] aalookup_unit_test DIS -- [algo/blast/unit_tests/api] seqsrc_unit_test @@ -23050,7 +23086,7 @@ DIS -- [algo/blast/unit_tests/api] pssmenginefreqratios_unit_test DIS -- [algo/blast/unit_tests/api] blastsetup_unit_test DIS -- [algo/blast/unit_tests/api] blastextend_unit_test -OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.07, user 0.06, sys 0.01) +OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.24, user 0.04, sys 0.00) DIS -- [algo/blast/unit_tests/api] pssmcreate_unit_test DIS -- [algo/blast/unit_tests/api] psiblast_iteration_unit_test DIS -- [algo/blast/unit_tests/api] hspfilter_besthit_unit_test @@ -23074,7 +23110,7 @@ DIS -- [algo/blast/unit_tests/api] subj_ranges_unit_test DIS -- [algo/blast/unit_tests/api] version_reference_unit_test DIS -- [algo/blast/unit_tests/api] ntscan_unit_test -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.19, user 0.18, sys 0.08) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.43, user 0.18, sys 0.00) DIS -- [algo/blast/unit_tests/api] remote_blast_unit_test DIS -- [algo/blast/unit_tests/api] uniform_search_unit_test DIS -- [algo/blast/unit_tests/api] blastfilter_unit_test @@ -23099,120 +23135,127 @@ make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.19, user 0.18, sys 0.08) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 201.43, user 0.18, sys 0.00) ====================================================================== aascan_unit_test ====================================================================== -3738753/000/0000/PB EE380C81768D1621 0001/0001 2024-12-23T02:56:34.315998 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test -3738753/000/0000/PB EE380C81768D1621 0002/0002 2024-12-23T02:56:34.316238 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1304147/000/0000/PB AF28E653975EC151 0001/0001 2026-01-25T10:10:29.676297 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test +1304147/000/0000/PB AF28E653975EC151 0002/0002 2026-01-25T10:10:29.676484 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Aug++7+2024+01:45:09&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=Aug++7+2024+01:45:09&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 Running 7 test cases... -3738753/000/0001/RB EE380C81768D1621 0003/0003 2024-12-23T02:56:34.319005 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -3738753/000/0001/R EE380C81768D1621 0004/0004 2024-12-23T02:56:34.320188 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=EE380C81768D16210000000000010001 -3738753/000/0001/R EE380C81768D1621 0005/0005 2024-12-23T02:56:34.320229 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -3738753/000/0001/R EE380C81768D1621 0006/0006 2024-12-23T02:56:34.321764 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=2 -3738753/000/0001/R EE380C81768D1621 0007/0007 2024-12-23T02:56:34.321952 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0008/0008 2024-12-23T02:56:34.321981 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0009/0009 2024-12-23T02:56:34.322002 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0010/0010 2024-12-23T02:56:34.322016 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0011/0011 2024-12-23T02:56:34.322030 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0012/0012 2024-12-23T02:56:34.322579 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=3 -3738753/000/0001/R EE380C81768D1621 0013/0013 2024-12-23T02:56:34.322905 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=4 -3738753/000/0001/R EE380C81768D1621 0014/0014 2024-12-23T02:56:34.323040 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0015/0015 2024-12-23T02:56:34.323058 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0016/0016 2024-12-23T02:56:34.323082 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0017/0017 2024-12-23T02:56:34.323097 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0018/0018 2024-12-23T02:56:34.323110 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0019/0019 2024-12-23T02:56:34.323210 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=5 -3738753/000/0001/R EE380C81768D1621 0020/0020 2024-12-23T02:56:35.324002 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=6 -3738753/000/0001/R EE380C81768D1621 0021/0021 2024-12-23T02:56:35.324267 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0022/0022 2024-12-23T02:56:35.324301 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0023/0023 2024-12-23T02:56:35.324327 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0024/0024 2024-12-23T02:56:35.324352 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0025/0025 2024-12-23T02:56:35.324374 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0026/0026 2024-12-23T02:56:35.324593 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=7 -3738753/000/0001/R EE380C81768D1621 0027/0027 2024-12-23T02:56:37.825562 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=8 -3738753/000/0001/R EE380C81768D1621 0028/0028 2024-12-23T02:56:37.825821 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0029/0029 2024-12-23T02:56:37.825855 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0030/0030 2024-12-23T02:56:37.825890 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0031/0031 2024-12-23T02:56:37.825918 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0032/0032 2024-12-23T02:56:37.825941 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0033/0033 2024-12-23T02:56:37.826167 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=9 -3738753/000/0001/R EE380C81768D1621 0034/0034 2024-12-23T02:56:42.577035 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=10 -3738753/000/0001/R EE380C81768D1621 0035/0035 2024-12-23T02:56:42.577305 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0036/0036 2024-12-23T02:56:42.577339 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0037/0037 2024-12-23T02:56:42.577367 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0038/0038 2024-12-23T02:56:42.577392 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0039/0039 2024-12-23T02:56:42.577415 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0040/0040 2024-12-23T02:56:42.577986 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=11 -3738753/000/0001/R EE380C81768D1621 0041/0041 2024-12-23T02:56:50.703890 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=12 -3738753/000/0001/R EE380C81768D1621 0042/0042 2024-12-23T02:56:50.704156 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0043/0043 2024-12-23T02:56:50.704191 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0044/0044 2024-12-23T02:56:50.704230 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0045/0045 2024-12-23T02:56:50.704259 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0046/0046 2024-12-23T02:56:50.704283 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0047/0047 2024-12-23T02:56:50.704535 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=13 -3738753/000/0001/R EE380C81768D1621 0048/0048 2024-12-23T02:57:03.892858 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=14 -3738753/000/0001/R EE380C81768D1621 0049/0049 2024-12-23T02:57:03.893186 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0050/0050 2024-12-23T02:57:03.893224 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0051/0051 2024-12-23T02:57:03.893253 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0052/0052 2024-12-23T02:57:03.893279 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0053/0053 2024-12-23T02:57:03.893303 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0054/0054 2024-12-23T02:57:03.893554 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=15 -3738753/000/0001/R EE380C81768D1621 0055/0055 2024-12-23T02:57:24.675631 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=16 -3738753/000/0001/R EE380C81768D1621 0056/0056 2024-12-23T02:57:24.675884 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0057/0057 2024-12-23T02:57:24.675919 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0058/0058 2024-12-23T02:57:24.675957 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0059/0059 2024-12-23T02:57:24.675986 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0060/0060 2024-12-23T02:57:24.676009 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0061/0061 2024-12-23T02:57:24.676255 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=17 -3738753/000/0001/R EE380C81768D1621 0062/0062 2024-12-23T02:57:54.677217 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=18 -3738753/000/0001/R EE380C81768D1621 0063/0063 2024-12-23T02:57:54.677483 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0064/0064 2024-12-23T02:57:54.677519 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0065/0065 2024-12-23T02:57:54.677548 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0066/0066 2024-12-23T02:57:54.677573 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0067/0067 2024-12-23T02:57:54.677597 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/R EE380C81768D1621 0068/0068 2024-12-23T02:57:54.677847 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=19 -3738753/000/0001/R EE380C81768D1621 0069/0069 2024-12-23T02:58:24.678672 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test extra issued_subhit=20 -3738753/000/0001/R EE380C81768D1621 0070/0070 2024-12-23T02:58:24.678946 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0001/R EE380C81768D1621 0071/0071 2024-12-23T02:58:24.678981 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0001/R EE380C81768D1621 0072/0072 2024-12-23T02:58:24.679020 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0001/R EE380C81768D1621 0073/0073 2024-12-23T02:58:24.679049 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0001/R EE380C81768D1621 0074/0074 2024-12-23T02:58:24.679072 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0001/RE EE380C81768D1621 0075/0075 2024-12-23T02:58:24.681189 codethink04-arm64 UNK_CLIENT EE380C81768D1621_0001SID aascan_unit_test request-stop 500 110.362180948 0 0 +1304147/000/0001/RB AF28E653975EC151 0003/0003 2026-01-25T10:10:29.678077 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1304147/000/0001/R AF28E653975EC151 0004/0004 2026-01-25T10:10:29.679001 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28E653975EC1510000000000010001 +1304147/000/0001/R AF28E653975EC151 0005/0005 2026-01-25T10:10:29.679033 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +1304147/000/0001/R AF28E653975EC151 0006/0006 2026-01-25T10:10:29.679840 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=2 +1304147/000/0001/R AF28E653975EC151 0007/0007 2026-01-25T10:10:29.679991 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0008/0008 2026-01-25T10:10:29.680016 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0009/0009 2026-01-25T10:10:29.680033 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0010/0010 2026-01-25T10:10:29.680042 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0011/0011 2026-01-25T10:10:29.680052 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0012/0012 2026-01-25T10:10:29.680523 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=3 +1304147/000/0001/R AF28E653975EC151 0013/0013 2026-01-25T10:10:29.680741 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=4 +1304147/000/0001/R AF28E653975EC151 0014/0014 2026-01-25T10:10:29.680851 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0015/0015 2026-01-25T10:10:29.680862 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0016/0016 2026-01-25T10:10:29.680878 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0017/0017 2026-01-25T10:10:29.680890 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0018/0018 2026-01-25T10:10:29.680898 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0019/0019 2026-01-25T10:10:29.680970 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=5 +1304147/000/0001/R AF28E653975EC151 0020/0020 2026-01-25T10:10:30.683389 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=6 +1304147/000/0001/R AF28E653975EC151 0021/0021 2026-01-25T10:10:30.683545 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0022/0022 2026-01-25T10:10:30.683559 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0023/0023 2026-01-25T10:10:30.683570 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0024/0024 2026-01-25T10:10:30.683580 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0025/0025 2026-01-25T10:10:30.683590 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0026/0026 2026-01-25T10:10:30.683730 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=7 +1304147/000/0001/R AF28E653975EC151 0027/0027 2026-01-25T10:10:33.187401 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=8 +1304147/000/0001/R AF28E653975EC151 0028/0028 2026-01-25T10:10:33.187561 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0029/0029 2026-01-25T10:10:33.187576 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0030/0030 2026-01-25T10:10:33.187591 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0031/0031 2026-01-25T10:10:33.187623 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0032/0032 2026-01-25T10:10:33.187635 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0033/0033 2026-01-25T10:10:33.187750 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=9 +1304147/000/0001/R AF28E653975EC151 0034/0034 2026-01-25T10:10:37.939404 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=10 +1304147/000/0001/R AF28E653975EC151 0035/0035 2026-01-25T10:10:37.939565 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0036/0036 2026-01-25T10:10:37.939601 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0037/0037 2026-01-25T10:10:37.939613 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0038/0038 2026-01-25T10:10:37.939624 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0039/0039 2026-01-25T10:10:37.939634 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0040/0040 2026-01-25T10:10:37.940011 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=11 +1304147/000/0001/R AF28E653975EC151 0041/0041 2026-01-25T10:10:46.067398 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=12 +1304147/000/0001/R AF28E653975EC151 0042/0042 2026-01-25T10:10:46.067580 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0043/0043 2026-01-25T10:10:46.067605 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0044/0044 2026-01-25T10:10:46.067620 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0045/0045 2026-01-25T10:10:46.067631 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0046/0046 2026-01-25T10:10:46.067641 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0047/0047 2026-01-25T10:10:46.067773 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=13 +1304147/000/0001/R AF28E653975EC151 0048/0048 2026-01-25T10:10:59.255737 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=14 +1304147/000/0001/R AF28E653975EC151 0049/0049 2026-01-25T10:10:59.255899 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0050/0050 2026-01-25T10:10:59.255915 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0051/0051 2026-01-25T10:10:59.255926 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0052/0052 2026-01-25T10:10:59.255936 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0053/0053 2026-01-25T10:10:59.255946 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0054/0054 2026-01-25T10:10:59.256079 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=15 +1304147/000/0001/R AF28E653975EC151 0055/0055 2026-01-25T10:11:20.039427 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=16 +1304147/000/0001/R AF28E653975EC151 0056/0056 2026-01-25T10:11:20.039594 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0057/0057 2026-01-25T10:11:20.039616 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0058/0058 2026-01-25T10:11:20.039630 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0059/0059 2026-01-25T10:11:20.039640 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0060/0060 2026-01-25T10:11:20.039649 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0061/0061 2026-01-25T10:11:20.039786 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=17 +1304147/000/0001/R AF28E653975EC151 0062/0062 2026-01-25T10:11:50.043411 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=18 +1304147/000/0001/R AF28E653975EC151 0063/0063 2026-01-25T10:11:50.043566 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0064/0064 2026-01-25T10:11:50.043581 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0065/0065 2026-01-25T10:11:50.043592 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0066/0066 2026-01-25T10:11:50.043602 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0067/0067 2026-01-25T10:11:50.043612 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/R AF28E653975EC151 0068/0068 2026-01-25T10:11:50.043742 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=19 +1304147/000/0001/R AF28E653975EC151 0069/0069 2026-01-25T10:12:20.044503 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test extra issued_subhit=20 +1304147/000/0001/R AF28E653975EC151 0070/0070 2026-01-25T10:12:20.044669 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0001/R AF28E653975EC151 0071/0071 2026-01-25T10:12:20.044691 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0001/R AF28E653975EC151 0072/0072 2026-01-25T10:12:20.044705 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0001/R AF28E653975EC151 0073/0073 2026-01-25T10:12:20.044715 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0001/R AF28E653975EC151 0074/0074 2026-01-25T10:12:20.044725 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0001/RE AF28E653975EC151 0075/0075 2026-01-25T10:12:20.045730 i-capture-the-hostname UNK_CLIENT AF28E653975EC151_0001SID aascan_unit_test request-stop 500 110.367654085 0 0 unknown location(0): fatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 253: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp", line 1926: ncbi::objects::CId2ReaderBase::x_SendID2Packet() --- failed to send request: NULL (in GetRecords(gi|18652417)) ./c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): last checkpoint: "ScanOffsetTest" fixture entry. -3738753/000/0002/RB EE380C81768D1621 0078/0078 2024-12-23T02:58:24.682045 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -3738753/000/0002/R EE380C81768D1621 0079/0079 2024-12-23T02:58:24.682176 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=EE380C81768D16210000000000020002 -3738753/000/0002/R EE380C81768D1621 0080/0080 2024-12-23T02:58:24.682202 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -3738753/000/0002/R EE380C81768D1621 0081/0081 2024-12-23T02:58:54.683023 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test extra issued_subhit=2 -3738753/000/0002/R EE380C81768D1621 0082/0082 2024-12-23T02:58:54.683272 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0002/R EE380C81768D1621 0083/0083 2024-12-23T02:58:54.683306 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0002/R EE380C81768D1621 0084/0084 2024-12-23T02:58:54.683333 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0002/R EE380C81768D1621 0085/0085 2024-12-23T02:58:54.683359 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0002/R EE380C81768D1621 0086/0086 2024-12-23T02:58:54.683381 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0002/R EE380C81768D1621 0087/0087 2024-12-23T02:58:54.683614 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test extra issued_subhit=3 -3738753/000/0002/R EE380C81768D1621 0088/0088 2024-12-23T02:59:24.684446 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test extra issued_subhit=4 -3738753/000/0002/R EE380C81768D1621 0089/0089 2024-12-23T02:59:24.684717 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -3738753/000/0002/R EE380C81768D1621 0090/0090 2024-12-23T02:59:24.684751 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -3738753/000/0002/R EE380C81768D1621 0091/0091 2024-12-23T02:59:24.684780 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -3738753/000/0002/R EE380C81768D1621 0092/0092 2024-12-23T02:59:24.684806 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -3738753/000/0002/R EE380C81768D1621 0093/0093 2024-12-23T02:59:24.684830 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -3738753/000/0002/R EE380C81768D1621 0094/0094 2024-12-23T02:59:24.685122 codethink04-arm64 UNK_CLIENT EE380C81768D1EE1_0002SID aascan_unit_test extra issued_subhit=5 +1304147/000/0002/RB AF28E653975EC151 0078/0078 2026-01-25T10:12:20.046189 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1304147/000/0002/R AF28E653975EC151 0079/0079 2026-01-25T10:12:20.046273 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF28E653975EC1510000000000020002 +1304147/000/0002/R AF28E653975EC151 0080/0080 2026-01-25T10:12:20.046285 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +1304147/000/0002/R AF28E653975EC151 0081/0081 2026-01-25T10:12:50.047405 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=2 +1304147/000/0002/R AF28E653975EC151 0082/0082 2026-01-25T10:12:50.047566 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0002/R AF28E653975EC151 0083/0083 2026-01-25T10:12:50.047582 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0002/R AF28E653975EC151 0084/0084 2026-01-25T10:12:50.047594 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0002/R AF28E653975EC151 0085/0085 2026-01-25T10:12:50.047612 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0002/R AF28E653975EC151 0086/0086 2026-01-25T10:12:50.047625 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0002/R AF28E653975EC151 0087/0087 2026-01-25T10:12:50.047744 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=3 +1304147/000/0002/R AF28E653975EC151 0088/0088 2026-01-25T10:13:20.051635 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=4 +1304147/000/0002/R AF28E653975EC151 0089/0089 2026-01-25T10:13:20.051797 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0002/R AF28E653975EC151 0090/0090 2026-01-25T10:13:20.051812 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0002/R AF28E653975EC151 0091/0091 2026-01-25T10:13:20.051823 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0002/R AF28E653975EC151 0092/0092 2026-01-25T10:13:20.051833 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0002/R AF28E653975EC151 0093/0093 2026-01-25T10:13:20.051843 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0002/R AF28E653975EC151 0094/0094 2026-01-25T10:13:20.051964 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=5 +1304147/000/0002/R AF28E653975EC151 0095/0095 2026-01-25T10:13:50.055416 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=6 +1304147/000/0002/R AF28E653975EC151 0096/0096 2026-01-25T10:13:50.055584 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#13000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1304147/000/0002/R AF28E653975EC151 0097/0097 2026-01-25T10:13:50.055598 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1304147/000/0002/R AF28E653975EC151 0098/0098 2026-01-25T10:13:50.055610 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1304147/000/0002/R AF28E653975EC151 0099/0099 2026-01-25T10:13:50.055627 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1304147/000/0002/R AF28E653975EC151 0100/0100 2026-01-25T10:13:50.055640 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1304147/000/0002/R AF28E653975EC151 0101/0101 2026-01-25T10:13:50.055760 i-capture-the-hostname UNK_CLIENT AF28E653975ECA21_0002SID aascan_unit_test extra issued_subhit=7 Maximum execution time of 200 second(s) is exceeded -real 200.19 +real 201.43 user 0.18 -sys 0.08 -Start time : 12/23/2024 02:56:34 -Stop time : 12/23/2024 02:59:54 -Load averages: 8.61 15.98 18.28 +sys 0.00 +Start time : 01/25/2026 10:10:29 +Stop time : 01/25/2026 10:13:50 +Load averages: 17.63 23.05 28.42 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 143 @@ -23382,14 +23425,14 @@ diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so was not linked against libpubmed.so (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so was not linked against libefetch.so (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so was not linked against libpubmed.so (it uses none of the library's symbols) dh_installdeb -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_gencontrol -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_md5sums -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_builddeb -O--sourcedirectory=c\+\+ -O--with-autoreconf -dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-6_all.deb'. dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-6_arm64.deb'. +dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-6_all.deb'. dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.16.0+ds-6_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-blast+_2.16.0+ds-6_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-blast+_2.16.0+ds-6_arm64.changes @@ -23399,12 +23442,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/837185/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3445803 and its subdirectories -I: Current time: Sun Dec 22 15:03:00 -12 2024 -I: pbuilder-time-stamp: 1734922980 +I: removing directory /srv/workspace/pbuilder/837185 and its subdirectories +I: Current time: Mon Jan 26 00:18:06 +14 2026 +I: pbuilder-time-stamp: 1769336286